Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:54:16 (1612291): wrapper (7.7.26015): starting
17:54:16 (1612291): wrapper: running run_atlas (--nthreads 12)
[2025-12-21 17:54:16] Arguments: --nthreads 12
[2025-12-21 17:54:16] Threads: 12
[2025-12-21 17:54:16] Checking for CVMFS
[2025-12-21 17:54:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-21 17:54:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-21 17:54:17] Running cvmfs_config stat atlas.cern.ch
[2025-12-21 17:54:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-21 17:54:18] 2.13.3.0 55115 13169 237820 154268 0 291 27336547 46080001 33642 130560 0 104042707 99.878 31539576 22115 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-12-21 17:54:18] CVMFS is ok
[2025-12-21 17:54:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-21 17:54:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-21 17:54:18] Further information can be found at the LHC@home message board.
[2025-12-21 17:54:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-21 17:54:18] Checking for apptainer binary...
[2025-12-21 17:54:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-21 17:54:18] Running /usr/bin/apptainer --version
[2025-12-21 17:54:18] apptainer version 1.4.4-1.el9
[2025-12-21 17:54:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-21 17:55:30] mff2104.farm.particle.cz
[2025-12-21 17:55:30] apptainer works
[2025-12-21 17:55:30] Set ATHENA_PROC_NUMBER=12
[2025-12-21 17:55:30] Set ATHENA_CORE_NUMBER=12
[2025-12-21 17:55:30] Starting ATLAS job with PandaID=6937273764
[2025-12-21 17:55:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-22 06:30:44]  *** The last 200 lines of the pilot log: ***
[2025-12-22 06:30:44] 2025-12-22 05:26:02,128 | INFO     | monitor loop #2805: job 0:6937273764 is in state 'finished'
[2025-12-22 06:30:44] 2025-12-22 05:26:02,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 06:30:44] 2025-12-22 05:26:03,259 | INFO     | time since job start (44942s) is within the limit (174528.0s)
[2025-12-22 06:30:44] 2025-12-22 05:26:04,634 | INFO     | monitor loop #2806: job 0:6937273764 is in state 'finished'
[2025-12-22 06:30:44] 2025-12-22 05:26:04,634 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 06:30:44] 2025-12-22 05:26:05,267 | INFO     | time since job start (44944s) is within the limit (174528.0s)
[2025-12-22 06:30:44] 2025-12-22 05:26:07,139 | INFO     | monitor loop #2807: job 0:6937273764 is in state 'finished'
[2025-12-22 06:30:44] 2025-12-22 05:26:07,139 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 06:30:44] 2025-12-22 05:26:07,277 | INFO     | time since job start (44946s) is within the limit (174528.0s)
[2025-12-22 06:30:44] 2025-12-22 05:26:09,284 | INFO     | time since job start (44948s) is within the limit (174528.0s)
[2025-12-22 06:30:44] 2025-12-22 05:26:09,646 | INFO     | monitor loop #2808: job 0:6937273764 is in state 'finished'
[2025-12-22 06:30:44] 2025-12-22 05:26:09,648 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 06:30:44] 2025-12-22 05:26:11,291 | INFO     | time since job start (44950s) is within the limit (174528.0s)
[2025-12-22 06:30:44] 2025-12-22 05:26:12,156 | INFO     | monitor loop #2809: job 0:6937273764 is in state 'finished'
[2025-12-22 06:30:44] 2025-12-22 05:26:12,156 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 06:30:44] 2025-12-22 05:26:12,869 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-22 06:30:44] 2025-12-22 05:26:12,888 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2779.565322916665
[2025-12-22 06:30:44] 2025-12-22 05:26:12,918 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-6937273764/memory_monitor_summary.json (trf name=prmon)
[2025-12-22 06:30:44] 2025-12-22 05:26:12,919 | INFO     | extracted standard info from prmon json
[2025-12-22 06:30:44] 2025-12-22 05:26:12,919 | INFO     | extracted standard memory fields from prmon json
[2025-12-22 06:30:44] 2025-12-22 05:26:12,919 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-22 06:30:44] 2025-12-22 05:26:12,932 | INFO     | fitting pss+swap vs Time
[2025-12-22 06:30:44] 2025-12-22 05:26:12,933 | INFO     | sum of square deviations: 122122017920.76935
[2025-12-22 06:30:44] 2025-12-22 05:26:12,944 | INFO     | sum of deviations: 596148757913.802
[2025-12-22 06:30:44] 2025-12-22 05:26:12,944 | INFO     | mean x: 1766358740.0177352
[2025-12-22 06:30:44] 2025-12-22 05:26:12,944 | INFO     | mean y: 3349572.7844474763
[2025-12-22 06:30:44] 2025-12-22 05:26:12,944 | INFO     | intersect: -8619277098.639683
[2025-12-22 06:30:44] 2025-12-22 05:26:12,945 | INFO     | chi2: 37.25095203696159
[2025-12-22 06:30:44] 2025-12-22 05:26:12,946 | INFO     | sum of square deviations: 119640413155.27425
[2025-12-22 06:30:44] 2025-12-22 05:26:12,957 | INFO     | sum of deviations: 896776212366.1478
[2025-12-22 06:30:44] 2025-12-22 05:26:12,957 | INFO     | mean x: 1766358587.5315933
[2025-12-22 06:30:44] 2025-12-22 05:26:12,957 | INFO     | mean y: 3368043.537087912
[2025-12-22 06:30:44] 2025-12-22 05:26:12,957 | INFO     | intersect: -13236542468.567078
[2025-12-22 06:30:44] 2025-12-22 05:26:12,958 | INFO     | chi2: 33.297266144704864
[2025-12-22 06:30:44] 2025-12-22 05:26:12,958 | INFO     | current chi2=33.297266144704864 (change=10.613650594308984 %)
[2025-12-22 06:30:44] 2025-12-22 05:26:12,958 | INFO     | right removable region: 727
[2025-12-22 06:30:44] 2025-12-22 05:26:12,959 | INFO     | sum of square deviations: 119639510965.27425
[2025-12-22 06:30:44] 2025-12-22 05:26:12,976 | INFO     | sum of deviations: 231628665051.73492
[2025-12-22 06:30:44] 2025-12-22 05:26:12,976 | INFO     | mean x: 1766358892.5315933
[2025-12-22 06:30:44] 2025-12-22 05:26:12,976 | INFO     | mean y: 3371965.4244505493
[2025-12-22 06:30:44] 2025-12-22 05:26:12,976 | INFO     | intersect: -3416395876.9742694
[2025-12-22 06:30:44] 2025-12-22 05:26:12,977 | INFO     | chi2: 32.46259714472322
[2025-12-22 06:30:44] 2025-12-22 05:26:12,977 | INFO     | current chi2=32.46259714472322 (change=12.85431547490978 %)
[2025-12-22 06:30:44] 2025-12-22 05:26:12,977 | INFO     | left removable region: 10
[2025-12-22 06:30:44] 2025-12-22 05:26:12,978 | INFO     | sum of square deviations: 114297941914.1757
[2025-12-22 06:30:44] 2025-12-22 05:26:12,989 | INFO     | sum of deviations: 280904751800.456
[2025-12-22 06:30:44] 2025-12-22 05:26:12,989 | INFO     | mean x: 1766358862.0627615
[2025-12-22 06:30:44] 2025-12-22 05:26:12,990 | INFO     | mean y: 3414670.567642957
[2025-12-22 06:30:44] 2025-12-22 05:26:12,990 | INFO     | intersect: -4337683597.94578
[2025-12-22 06:30:44] 2025-12-22 05:26:12,990 | INFO     | chi2: 24.106990595779067
[2025-12-22 06:30:44] 2025-12-22 05:26:12,991 | INFO     | current memory leak: 2.46 B/s (using 717 data points, chi2=24.11)
[2025-12-22 06:30:44] 2025-12-22 05:26:12,992 | INFO     | could have reported an average CPU frequency of 2783 MHz (28 samples)
[2025-12-22 06:30:44] 2025-12-22 05:26:12,992 | INFO     | ..............................
[2025-12-22 06:30:44] 2025-12-22 05:26:12,992 | INFO     | . Timing measurements:
[2025-12-22 06:30:44] 2025-12-22 05:26:12,992 | INFO     | . get job = 0 s
[2025-12-22 06:30:44] 2025-12-22 05:26:12,992 | INFO     | . initial setup = 4 s
[2025-12-22 06:30:44] 2025-12-22 05:26:12,992 | INFO     | . payload setup = 58 s
[2025-12-22 06:30:44] 2025-12-22 05:26:12,992 | INFO     | . stage-in = 0 s
[2025-12-22 06:30:44] 2025-12-22 05:26:12,992 | INFO     | . payload execution = 44746 s
[2025-12-22 06:30:44] 2025-12-22 05:26:12,992 | INFO     | . stage-out = 4 s
[2025-12-22 06:30:44] 2025-12-22 05:26:12,992 | INFO     | . log creation = 1 s
[2025-12-22 06:30:44] 2025-12-22 05:26:12,993 | INFO     | ..............................
[2025-12-22 06:30:44] 2025-12-22 05:26:13,129 | INFO     | 
[2025-12-22 06:30:44] 2025-12-22 05:26:13,134 | INFO     | job summary report
[2025-12-22 06:30:44] 2025-12-22 05:26:13,134 | INFO     | --------------------------------------------------
[2025-12-22 06:30:44] 2025-12-22 05:26:13,134 | INFO     | PanDA job id: 6937273764
[2025-12-22 06:30:44] 2025-12-22 05:26:13,134 | INFO     | task id: 47960988
[2025-12-22 06:30:44] 2025-12-22 05:26:13,134 | INFO     | errors: (none)
[2025-12-22 06:30:44] 2025-12-22 05:26:13,134 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-22 06:30:44] 2025-12-22 05:26:13,134 | INFO     | pilot state: finished 
[2025-12-22 06:30:44] 2025-12-22 05:26:13,134 | INFO     | transexitcode: 0
[2025-12-22 06:30:44] 2025-12-22 05:26:13,135 | INFO     | exeerrorcode: 0
[2025-12-22 06:30:44] 2025-12-22 05:26:13,135 | INFO     | exeerrordiag: 
[2025-12-22 06:30:44] 2025-12-22 05:26:13,135 | INFO     | exitcode: 0
[2025-12-22 06:30:44] 2025-12-22 05:26:13,135 | INFO     | exitmsg: OK
[2025-12-22 06:30:44] 2025-12-22 05:26:13,135 | INFO     | cpuconsumptiontime: 291216 s
[2025-12-22 06:30:44] 2025-12-22 05:26:13,135 | INFO     | nevents: 1000
[2025-12-22 06:30:44] 2025-12-22 05:26:13,135 | INFO     | neventsw: 0
[2025-12-22 06:30:44] 2025-12-22 05:26:13,135 | INFO     | pid: 1656692
[2025-12-22 06:30:44] 2025-12-22 05:26:13,135 | INFO     | pgrp: 1656692
[2025-12-22 06:30:44] 2025-12-22 05:26:13,135 | INFO     | corecount: 12
[2025-12-22 06:30:44] 2025-12-22 05:26:13,135 | INFO     | event service: False
[2025-12-22 06:30:44] 2025-12-22 05:26:13,135 | INFO     | sizes: {0: 2284431, 1: 2284630, 12: 2284630, 23: 2284658, 34: 2284686, 43: 2284976, 45: 2285132, 44809: 2331163, 44814: 2340159, 44816: 2340215, 44863: 2340461}
[2025-12-22 06:30:44] 2025-12-22 05:26:13,135 | INFO     | --------------------------------------------------
[2025-12-22 06:30:44] 2025-12-22 05:26:13,135 | INFO     | 
[2025-12-22 06:30:44] 2025-12-22 05:26:13,136 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2025-12-22 06:30:44] 2025-12-22 05:26:13,302 | INFO     | time since job start (44952s) is within the limit (174528.0s)
[2025-12-22 06:30:44] 2025-12-22 05:26:13,339 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-22 06:30:44] 2025-12-22 05:26:13,339 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-22 06:30:44] 2025-12-22 05:26:13,339 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-22 06:30:44] 2025-12-22 05:26:13,340 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-22 06:30:44] 2025-12-22 05:26:13,340 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-22 06:30:44] 2025-12-22 05:26:13,340 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-22 06:30:44] 2025-12-22 05:26:13,340 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-22 06:30:44] 2025-12-22 05:26:13,340 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-22 06:30:44] 2025-12-22 05:26:13,340 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-22 06:30:44] 2025-12-22 05:26:13,340 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-22 06:30:44] 2025-12-22 05:26:13,340 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-22 06:30:44] 2025-12-22 05:26:13,340 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-22 06:30:44] 2025-12-22 05:26:13,340 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-22 06:30:44] 2025-12-22 05:26:13,340 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-22 06:30:44] 2025-12-22 05:26:13,340 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-22 06:30:44] 2025-12-22 05:26:13,340 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-22 06:30:44] 2025-12-22 05:26:13,341 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-22 06:30:44] 2025-12-22 05:26:13,341 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-22 06:30:44] 2025-12-22 05:26:13,341 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-22 06:30:44] 2025-12-22 05:26:13,341 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-22 06:30:44] 2025-12-22 05:26:13,341 | INFO     | job 6937273764 has completed (purged errors)
[2025-12-22 06:30:44] 2025-12-22 05:26:13,341 | INFO     | overall cleanup function is called
[2025-12-22 06:30:44] 2025-12-22 05:26:14,389 | INFO     | --- collectZombieJob: --- 10, [1656692]
[2025-12-22 06:30:44] 2025-12-22 05:26:14,390 | INFO     | zombie collector waiting for pid 1656692
[2025-12-22 06:30:44] 2025-12-22 05:26:14,390 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-22 06:30:44] 2025-12-22 05:26:14,390 | INFO     | collected zombie processes
[2025-12-22 06:30:44] 2025-12-22 05:26:14,390 | INFO     | will attempt to kill all subprocesses of pid=1656692
[2025-12-22 06:30:44] 2025-12-22 05:26:15,500 | INFO     | process IDs to be killed: [1656692] (in reverse order)
[2025-12-22 06:30:44] 2025-12-22 05:26:15,984 | WARNING  | found no corresponding commands to process id(s)
[2025-12-22 06:30:44] 2025-12-22 05:26:15,984 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-22 06:30:44] 2025-12-22 05:26:16,032 | INFO     | did not find any defunct processes belonging to 1656692
[2025-12-22 06:30:44] 2025-12-22 05:26:16,076 | INFO     | did not find any defunct processes belonging to 1656692
[2025-12-22 06:30:44] 2025-12-22 05:26:16,077 | INFO     | ready for new job
[2025-12-22 06:30:44] 2025-12-22 05:26:16,077 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-22 06:30:44] 2025-12-22 05:26:16,081 | INFO     | ***************************************
[2025-12-22 06:30:44] 2025-12-22 05:26:16,082 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-22 06:30:44] 2025-12-22 05:26:16,082 | INFO     | ***************************************
[2025-12-22 06:30:44] 2025-12-22 05:26:16,082 | INFO     | 
[2025-12-22 06:30:44] 2025-12-22 05:26:16,089 | INFO     | architecture information:
[2025-12-22 06:30:44] 2025-12-22 05:26:16,099 | INFO     | executing command: cat /etc/os-release
[2025-12-22 06:30:44] 2025-12-22 05:26:16,212 | INFO     | cat /etc/os-release:
[2025-12-22 06:30:44] NAME="CentOS Linux"
[2025-12-22 06:30:44] VERSION="7 (Core)"
[2025-12-22 06:30:44] ID="centos"
[2025-12-22 06:30:44] ID_LIKE="rhel fedora"
[2025-12-22 06:30:44] VERSION_ID="7"
[2025-12-22 06:30:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-22 06:30:44] ANSI_COLOR="0;31"
[2025-12-22 06:30:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-22 06:30:44] HOME_URL="https://www.centos.org/"
[2025-12-22 06:30:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-22 06:30:44] 
[2025-12-22 06:30:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-22 06:30:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-22 06:30:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-22 06:30:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-22 06:30:44] 
[2025-12-22 06:30:44] 2025-12-22 05:26:16,212 | INFO     | ***************************************
[2025-12-22 06:30:44] 2025-12-22 05:26:16,716 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2025-12-22 06:30:44] 2025-12-22 05:26:16,863 | INFO     | sufficient remaining disk space (1651927678976 B)
[2025-12-22 06:30:44] 2025-12-22 05:26:16,863 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-22 06:30:44] 2025-12-22 05:26:16,864 | INFO     | current server update state: UPDATING_FINAL
[2025-12-22 06:30:44] 2025-12-22 05:26:16,864 | INFO     | update_server=False
[2025-12-22 06:30:44] 2025-12-22 05:26:16,864 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-22 06:30:44] 2025-12-22 05:26:16,864 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-22 06:30:44] 2025-12-22 05:26:17,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-22 06:30:44] 2025-12-22 05:26:17,178 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-22 06:30:44] 2025-12-22 05:26:17,179 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-22 06:30:44] 2025-12-22 05:26:17,179 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-22 06:30:44] 2025-12-22 05:26:17,179 | INFO     | will abort loop
[2025-12-22 06:30:44] 2025-12-22 05:26:17,200 | INFO     | all payload control threads have been joined
[2025-12-22 06:30:44] 2025-12-22 05:26:17,450 | INFO     | all data control threads have been joined
[2025-12-22 06:30:44] 2025-12-22 05:26:17,471 | INFO     | [monitor] cgroup control has ended
[2025-12-22 06:30:44] 2025-12-22 05:26:17,870 | INFO     | [job] retrieve thread has finished
[2025-12-22 06:30:44] 2025-12-22 05:26:18,055 | INFO     | [job] create_data_payload thread has finished
[2025-12-22 06:30:44] 2025-12-22 05:26:18,055 | INFO     | [payload] validate_pre thread has finished
[2025-12-22 06:30:44] 2025-12-22 05:26:18,087 | INFO     | all job control threads have been joined
[2025-12-22 06:30:44] 2025-12-22 05:26:18,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-22 06:30:44] 2025-12-22 05:26:18,185 | INFO     | [job] job monitor thread has finished
[2025-12-22 06:30:44] 2025-12-22 05:26:18,206 | INFO     | [payload] control thread has finished
[2025-12-22 06:30:44] 2025-12-22 05:26:18,221 | INFO     | [job] validate thread has finished
[2025-12-22 06:30:44] 2025-12-22 05:26:18,296 | INFO     | [payload] execute_payloads thread has finished
[2025-12-22 06:30:44] 2025-12-22 05:26:18,460 | INFO     | [data] control thread has finished
[2025-12-22 06:30:44] 2025-12-22 05:26:18,560 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-22 06:30:44] 2025-12-22 05:26:18,742 | INFO     | [data] copytool_in thread has finished
[2025-12-22 06:30:44] 2025-12-22 05:26:18,749 | INFO     | [payload] failed_post thread has finished
[2025-12-22 06:30:44] 2025-12-22 05:26:19,023 | INFO     | [data] copytool_out thread has finished
[2025-12-22 06:30:44] 2025-12-22 05:26:19,094 | INFO     | [job] control thread has finished
[2025-12-22 06:30:44] 2025-12-22 05:26:19,153 | INFO     | [job] queue monitor thread has finished
[2025-12-22 06:30:44] 2025-12-22 05:26:19,355 | INFO     | [payload] validate_post thread has finished
[2025-12-22 06:30:44] 2025-12-22 05:26:20,882 | INFO     | [data] queue_monitor thread has finished
[2025-12-22 06:30:44] 2025-12-22 05:26:22,319 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140671929337664)>', '<ExcThread(monitor, started 140671562270464)>']
[2025-12-22 06:30:44] 2025-12-22 05:26:27,346 | INFO     | all workflow threads have been joined
[2025-12-22 06:30:44] 2025-12-22 05:26:27,348 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-22 06:30:44] 2025-12-22 05:26:27,349 | INFO     | traces error code: 0
[2025-12-22 06:30:44] 2025-12-22 05:26:27,349 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-22 06:30:44] 2025-12-22 05:26:47,732 | INFO     | PID=1622153 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-22 06:30:44] 2025-12-22 05:26:47,733 | INFO     | .. there are 77 such processes running
[2025-12-22 06:30:44] 2025-12-22 05:26:47,734 | INFO     | found 0 job(s) in 20 queues
[2025-12-22 06:30:44] 2025-12-22 05:26:47,734 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-22 06:30:44] 2025-12-22 05:26:47,734 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-22 06:30:44] 2025-12-22 05:26:47,734 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-22 06:30:44] 2025-12-22 05:26:47,734 | INFO     | [monitor] control thread has ended
[2025-12-22 06:30:44] 2025-12-22 05:26:48,124 [wrapper] ==== pilot stdout END ====
[2025-12-22 06:30:44] 2025-12-22 05:26:48,166 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-22 06:30:44] 2025-12-22 05:26:48,206 [wrapper] pilotpid: 1622153
[2025-12-22 06:30:44] 2025-12-22 05:26:48,241 [wrapper] Pilot exit status: 0
[2025-12-22 06:30:44] 2025-12-22 05:26:48,395 [wrapper] pandaids: 6937273764
[2025-12-22 06:30:44] 2025-12-22 05:26:48,773 [wrapper] cleanup supervisor_pilot   26572 1622154
[2025-12-22 06:30:44] 2025-12-22 05:26:48,822 [wrapper] Test setup, not cleaning
[2025-12-22 06:30:44] 2025-12-22 05:26:48,854 [wrapper] apfmon messages muted
[2025-12-22 06:30:44] 2025-12-22 05:26:48,901 [wrapper] ==== wrapper stdout END ====
[2025-12-22 06:30:44] 2025-12-22 05:26:48,946 [wrapper] ==== wrapper stderr END ====
[2025-12-22 06:30:44]  *** Error codes and diagnostics ***
[2025-12-22 06:30:44]     "exeErrorCode": 0,
[2025-12-22 06:30:44]     "exeErrorDiag": "",
[2025-12-22 06:30:44]     "pilotErrorCode": 0,
[2025-12-22 06:30:44]     "pilotErrorDiag": "",
[2025-12-22 06:30:44]  *** Listing of results directory ***
[2025-12-22 06:30:44] total 1397468
[2025-12-22 06:30:44] -rw-r--r-- 1 boinc boinc    579449 Dec 20 06:05 pilot3.tar.gz
[2025-12-22 06:30:44] -rwx------ 1 boinc boinc     36322 Dec 20 06:08 runpilot2-wrapper.sh
[2025-12-22 06:30:44] -rw-r--r-- 1 boinc boinc      5112 Dec 20 06:12 queuedata.json
[2025-12-22 06:30:44] -rw-r--r-- 1 boinc boinc       100 Dec 21 17:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-22 06:30:44] -rwxr-xr-x 1 boinc boinc      7986 Dec 21 17:54 run_atlas
[2025-12-22 06:30:44] -rw-r--r-- 1 boinc boinc       105 Dec 21 17:54 job.xml
[2025-12-22 06:30:44] -rw-r--r-- 2 boinc boinc 416824874 Dec 21 17:54 EVNT.47960986._000126.pool.root.1
[2025-12-22 06:30:44] -rw-r--r-- 1 boinc boinc      6675 Dec 21 17:54 init_data.xml
[2025-12-22 06:30:44] -rw-r--r-- 2 boinc boinc     15847 Dec 21 17:54 start_atlas.sh
[2025-12-22 06:30:44] drwxrwx--x 2 boinc boinc      4096 Dec 21 17:54 shared
[2025-12-22 06:30:44] -rw-r--r-- 2 boinc boinc    592598 Dec 21 17:54 input.tar.gz
[2025-12-22 06:30:44] -rw-r--r-- 1 boinc boinc         0 Dec 21 17:54 boinc_lockfile
[2025-12-22 06:30:44] -rw-r--r-- 1 boinc boinc      2877 Dec 21 17:55 pandaJob.out
[2025-12-22 06:30:44] -rw------- 1 boinc boinc    988138 Dec 21 17:56 agis_schedconf.cvmfs.json
[2025-12-22 06:30:44] drwx------ 5 boinc boinc      4096 Dec 21 17:57 pilot3
[2025-12-22 06:30:44] -rw-r--r-- 1 boinc boinc       532 Dec 22 05:51 boinc_task_state.xml
[2025-12-22 06:30:44] -rw------- 1 boinc boinc 993682801 Dec 22 06:23 HITS.47960988._000809.pool.root.1
[2025-12-22 06:30:44] -rw------- 1 boinc boinc      1038 Dec 22 06:25 memory_monitor_summary.json
[2025-12-22 06:30:44] -rw------- 1 boinc boinc   1516240 Dec 22 06:25 agis_ddmendpoints.agis.ALL.json
[2025-12-22 06:30:44] -rw------- 1 boinc boinc   2401992 Dec 22 06:25 log.47960988._000809.job.log.tgz.1
[2025-12-22 06:30:44] -rw------- 1 boinc boinc      8609 Dec 22 06:26 heartbeat.json
[2025-12-22 06:30:44] -rw------- 1 boinc boinc       823 Dec 22 06:26 pilotlog.txt
[2025-12-22 06:30:44] -rw------- 1 boinc boinc        95 Dec 22 06:26 pilot_heartbeat.json
[2025-12-22 06:30:44] -rw------- 1 boinc boinc   5889997 Dec 22 06:26 log.47960988._000809.job.log.1
[2025-12-22 06:30:44] -rw------- 1 boinc boinc       353 Dec 22 06:26 output.list
[2025-12-22 06:30:44] -rw-r--r-- 1 boinc boinc       620 Dec 22 06:26 runtime_log
[2025-12-22 06:30:44] -rw------- 1 boinc boinc   8314880 Dec 22 06:26 result.tar.gz
[2025-12-22 06:30:44] -rw-r--r-- 1 boinc boinc      8881 Dec 22 06:26 runtime_log.err
[2025-12-22 06:30:44] -rw------- 1 boinc boinc       671 Dec 22 06:26 GRaKDmhN4q8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRVhKDmULZzen.diag
[2025-12-22 06:30:44] -rw-r--r-- 1 boinc boinc      8192 Dec 22 06:30 boinc_mmap_file
[2025-12-22 06:30:44] -rw-r--r-- 1 boinc boinc        28 Dec 22 06:30 wrapper_checkpoint.txt
[2025-12-22 06:30:44] -rw-r--r-- 1 boinc boinc     21720 Dec 22 06:30 stderr.txt
[2025-12-22 06:30:44] HITS file was successfully produced:
[2025-12-22 06:30:44] -rw------- 1 boinc boinc 993682801 Dec 22 06:23 shared/HITS.pool.root.1
[2025-12-22 06:30:44]  *** Contents of shared directory: ***
[2025-12-22 06:30:44] total 1386176
[2025-12-22 06:30:44] -rw-r--r-- 2 boinc boinc 416824874 Dec 21 17:54 ATLAS.root_0
[2025-12-22 06:30:44] -rw-r--r-- 2 boinc boinc     15847 Dec 21 17:54 start_atlas.sh
[2025-12-22 06:30:44] -rw-r--r-- 2 boinc boinc    592598 Dec 21 17:54 input.tar.gz
[2025-12-22 06:30:44] -rw------- 1 boinc boinc 993682801 Dec 22 06:23 HITS.pool.root.1
[2025-12-22 06:30:44] -rw------- 1 boinc boinc   8314880 Dec 22 06:26 result.tar.gz
06:30:46 (1612291): run_atlas exited; CPU time 292350.042656
06:30:46 (1612291): called boinc_finish(0)

</stderr_txt>
]]>

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