Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:15:42 (1323719): wrapper (7.7.26015): starting
16:15:42 (1323719): wrapper: running run_atlas (--nthreads 12)
[2025-12-21 16:15:42] Arguments: --nthreads 12
[2025-12-21 16:15:42] Threads: 12
[2025-12-21 16:15:42] Checking for CVMFS
[2025-12-21 16:15:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-21 16:15:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-21 16:15:43] Running cvmfs_config stat atlas.cern.ch
[2025-12-21 16:15:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-21 16:15:45] 2.13.3.0 55115 13070 231980 154266 2 171 27167934 46080001 34691 130560 0 103627363 99.878 31505241 22106 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-12-21 16:15:45] CVMFS is ok
[2025-12-21 16:15:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-21 16:15:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-21 16:15:45] Further information can be found at the LHC@home message board.
[2025-12-21 16:15:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-21 16:15:45] Checking for apptainer binary...
[2025-12-21 16:15:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-21 16:15:45] Running /usr/bin/apptainer --version
[2025-12-21 16:15:45] apptainer version 1.4.4-1.el9
[2025-12-21 16:15:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-21 16:16:47] mff2104.farm.particle.cz
[2025-12-21 16:16:47] apptainer works
[2025-12-21 16:16:47] Set ATHENA_PROC_NUMBER=12
[2025-12-21 16:16:47] Set ATHENA_CORE_NUMBER=12
[2025-12-21 16:16:47] Starting ATLAS job with PandaID=6937445905
[2025-12-21 16:16:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-22 04:22:27]  *** The last 200 lines of the pilot log: ***
[2025-12-22 04:22:27] 2025-12-22 02:51:29,848 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 04:22:27] 2025-12-22 02:51:31,356 | INFO     | time since job start (41586s) is within the limit (174528.0s)
[2025-12-22 04:22:27] 2025-12-22 02:51:32,356 | INFO     | monitor loop #2591: job 0:6937445905 is in state 'finished'
[2025-12-22 04:22:27] 2025-12-22 02:51:32,356 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 04:22:27] 2025-12-22 02:51:33,366 | INFO     | time since job start (41588s) is within the limit (174528.0s)
[2025-12-22 04:22:27] 2025-12-22 02:51:34,863 | INFO     | monitor loop #2592: job 0:6937445905 is in state 'finished'
[2025-12-22 04:22:27] 2025-12-22 02:51:34,863 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 04:22:27] 2025-12-22 02:51:35,379 | INFO     | time since job start (41590s) is within the limit (174528.0s)
[2025-12-22 04:22:27] 2025-12-22 02:51:37,371 | INFO     | monitor loop #2593: job 0:6937445905 is in state 'finished'
[2025-12-22 04:22:27] 2025-12-22 02:51:37,371 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 04:22:27] 2025-12-22 02:51:37,387 | INFO     | time since job start (41592s) is within the limit (174528.0s)
[2025-12-22 04:22:27] 2025-12-22 02:51:39,396 | INFO     | time since job start (41594s) is within the limit (174528.0s)
[2025-12-22 04:22:27] 2025-12-22 02:51:39,880 | INFO     | monitor loop #2594: job 0:6937445905 is in state 'finished'
[2025-12-22 04:22:27] 2025-12-22 02:51:39,880 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 04:22:27] 2025-12-22 02:51:40,012 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-22 04:22:27] 2025-12-22 02:51:40,027 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2797.4296874999995
[2025-12-22 04:22:27] 2025-12-22 02:51:40,046 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6937445905/memory_monitor_summary.json (trf name=prmon)
[2025-12-22 04:22:27] 2025-12-22 02:51:40,047 | INFO     | extracted standard info from prmon json
[2025-12-22 04:22:27] 2025-12-22 02:51:40,047 | INFO     | extracted standard memory fields from prmon json
[2025-12-22 04:22:27] 2025-12-22 02:51:40,047 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-22 04:22:27] 2025-12-22 02:51:40,059 | INFO     | fitting pss+swap vs Time
[2025-12-22 04:22:27] 2025-12-22 02:51:40,059 | INFO     | sum of square deviations: 96644559371.3274
[2025-12-22 04:22:27] 2025-12-22 02:51:40,069 | INFO     | sum of deviations: 933830668302.1007
[2025-12-22 04:22:27] 2025-12-22 02:51:40,070 | INFO     | mean x: 1766351145.3362832
[2025-12-22 04:22:27] 2025-12-22 02:51:40,070 | INFO     | mean y: 3278232.451327434
[2025-12-22 04:22:27] 2025-12-22 02:51:40,070 | INFO     | intersect: -17064137473.465063
[2025-12-22 04:22:27] 2025-12-22 02:51:40,071 | INFO     | chi2: 40.010738663216934
[2025-12-22 04:22:27] 2025-12-22 02:51:40,071 | INFO     | sum of square deviations: 94522564401.84242
[2025-12-22 04:22:27] 2025-12-22 02:51:40,081 | INFO     | sum of deviations: 1210765412579.5864
[2025-12-22 04:22:27] 2025-12-22 02:51:40,082 | INFO     | mean x: 1766350992.8499258
[2025-12-22 04:22:27] 2025-12-22 02:51:40,082 | INFO     | mean y: 3298130.7682020804
[2025-12-22 04:22:27] 2025-12-22 02:51:40,082 | INFO     | intersect: -22622375454.708668
[2025-12-22 04:22:27] 2025-12-22 02:51:40,083 | INFO     | chi2: 35.986188969478036
[2025-12-22 04:22:27] 2025-12-22 02:51:40,083 | INFO     | current chi2=35.986188969478036 (change=10.058673816584113 %)
[2025-12-22 04:22:27] 2025-12-22 02:51:40,083 | INFO     | right removable region: 672
[2025-12-22 04:22:27] 2025-12-22 02:51:40,084 | INFO     | sum of square deviations: 94521804951.84244
[2025-12-22 04:22:27] 2025-12-22 02:51:40,093 | INFO     | sum of deviations: 602555648176.2291
[2025-12-22 04:22:27] 2025-12-22 02:51:40,093 | INFO     | mean x: 1766351297.8499258
[2025-12-22 04:22:27] 2025-12-22 02:51:40,093 | INFO     | mean y: 3302031.606240713
[2025-12-22 04:22:27] 2025-12-22 02:51:40,094 | INFO     | intersect: -11256797706.492758
[2025-12-22 04:22:27] 2025-12-22 02:51:40,094 | INFO     | chi2: 34.937354454893594
[2025-12-22 04:22:27] 2025-12-22 02:51:40,094 | INFO     | current chi2=34.937354454893594 (change=12.68005634944064 %)
[2025-12-22 04:22:27] 2025-12-22 02:51:40,094 | INFO     | left removable region: 10
[2025-12-22 04:22:27] 2025-12-22 02:51:40,095 | INFO     | sum of square deviations: 89962515372.07231
[2025-12-22 04:22:27] 2025-12-22 02:51:40,105 | INFO     | sum of deviations: 635801545609.6881
[2025-12-22 04:22:27] 2025-12-22 02:51:40,105 | INFO     | mean x: 1766351267.3806646
[2025-12-22 04:22:27] 2025-12-22 02:51:40,105 | INFO     | mean y: 3349090.1163141993
[2025-12-22 04:22:27] 2025-12-22 02:51:40,105 | INFO     | intersect: -12480170976.496828
[2025-12-22 04:22:27] 2025-12-22 02:51:40,106 | INFO     | chi2: 25.840688586414437
[2025-12-22 04:22:27] 2025-12-22 02:51:40,106 | INFO     | current memory leak: 7.07 B/s (using 662 data points, chi2=25.84)
[2025-12-22 04:22:27] 2025-12-22 02:51:40,107 | INFO     | could have reported an average CPU frequency of 2775 MHz (26 samples)
[2025-12-22 04:22:27] 2025-12-22 02:51:40,107 | INFO     | ..............................
[2025-12-22 04:22:27] 2025-12-22 02:51:40,107 | INFO     | . Timing measurements:
[2025-12-22 04:22:27] 2025-12-22 02:51:40,107 | INFO     | . get job = 0 s
[2025-12-22 04:22:27] 2025-12-22 02:51:40,107 | INFO     | . initial setup = 4 s
[2025-12-22 04:22:27] 2025-12-22 02:51:40,107 | INFO     | . payload setup = 60 s
[2025-12-22 04:22:27] 2025-12-22 02:51:40,107 | INFO     | . stage-in = 0 s
[2025-12-22 04:22:27] 2025-12-22 02:51:40,108 | INFO     | . payload execution = 41392 s
[2025-12-22 04:22:27] 2025-12-22 02:51:40,108 | INFO     | . stage-out = 5 s
[2025-12-22 04:22:27] 2025-12-22 02:51:40,108 | INFO     | . log creation = 1 s
[2025-12-22 04:22:27] 2025-12-22 02:51:40,108 | INFO     | ..............................
[2025-12-22 04:22:27] 2025-12-22 02:51:40,303 | INFO     | 
[2025-12-22 04:22:27] 2025-12-22 02:51:40,303 | INFO     | job summary report
[2025-12-22 04:22:27] 2025-12-22 02:51:40,303 | INFO     | --------------------------------------------------
[2025-12-22 04:22:27] 2025-12-22 02:51:40,303 | INFO     | PanDA job id: 6937445905
[2025-12-22 04:22:27] 2025-12-22 02:51:40,303 | INFO     | task id: 47961002
[2025-12-22 04:22:27] 2025-12-22 02:51:40,303 | INFO     | errors: (none)
[2025-12-22 04:22:27] 2025-12-22 02:51:40,303 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-22 04:22:27] 2025-12-22 02:51:40,304 | INFO     | pilot state: finished 
[2025-12-22 04:22:27] 2025-12-22 02:51:40,304 | INFO     | transexitcode: 0
[2025-12-22 04:22:27] 2025-12-22 02:51:40,304 | INFO     | exeerrorcode: 0
[2025-12-22 04:22:27] 2025-12-22 02:51:40,304 | INFO     | exeerrordiag: 
[2025-12-22 04:22:27] 2025-12-22 02:51:40,304 | INFO     | exitcode: 0
[2025-12-22 04:22:27] 2025-12-22 02:51:40,304 | INFO     | exitmsg: OK
[2025-12-22 04:22:27] 2025-12-22 02:51:40,304 | INFO     | cpuconsumptiontime: 263386 s
[2025-12-22 04:22:27] 2025-12-22 02:51:40,304 | INFO     | nevents: 1000
[2025-12-22 04:22:27] 2025-12-22 02:51:40,304 | INFO     | neventsw: 0
[2025-12-22 04:22:27] 2025-12-22 02:51:40,304 | INFO     | pid: 1358064
[2025-12-22 04:22:27] 2025-12-22 02:51:40,304 | INFO     | pgrp: 1358064
[2025-12-22 04:22:27] 2025-12-22 02:51:40,304 | INFO     | corecount: 12
[2025-12-22 04:22:27] 2025-12-22 02:51:40,304 | INFO     | event service: False
[2025-12-22 04:22:27] 2025-12-22 02:51:40,305 | INFO     | sizes: {0: 2283744, 1: 2284601, 2: 2284629, 12: 2284629, 23: 2284657, 34: 2284685, 41: 2285103, 45: 2285131, 41457: 2329281, 41464: 2338277, 41467: 2338333, 41509:
[2025-12-22 04:22:27] 2025-12-22 02:51:40,305 | INFO     | --------------------------------------------------
[2025-12-22 04:22:27] 2025-12-22 02:51:40,305 | INFO     | 
[2025-12-22 04:22:27] 2025-12-22 02:51:40,305 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2025-12-22 04:22:27] 2025-12-22 02:51:40,512 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-22 04:22:27] 2025-12-22 02:51:40,512 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-22 04:22:27] 2025-12-22 02:51:40,512 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-22 04:22:27] 2025-12-22 02:51:40,513 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-22 04:22:27] 2025-12-22 02:51:40,513 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-22 04:22:27] 2025-12-22 02:51:40,513 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-22 04:22:27] 2025-12-22 02:51:40,513 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-22 04:22:27] 2025-12-22 02:51:40,513 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-22 04:22:27] 2025-12-22 02:51:40,513 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-22 04:22:27] 2025-12-22 02:51:40,513 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-22 04:22:27] 2025-12-22 02:51:40,513 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-22 04:22:27] 2025-12-22 02:51:40,513 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-22 04:22:27] 2025-12-22 02:51:40,513 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-22 04:22:27] 2025-12-22 02:51:40,513 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-22 04:22:27] 2025-12-22 02:51:40,514 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-22 04:22:27] 2025-12-22 02:51:40,514 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-22 04:22:27] 2025-12-22 02:51:40,514 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-22 04:22:27] 2025-12-22 02:51:40,514 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-22 04:22:27] 2025-12-22 02:51:40,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-22 04:22:27] 2025-12-22 02:51:40,514 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-22 04:22:27] 2025-12-22 02:51:40,514 | INFO     | job 6937445905 has completed (purged errors)
[2025-12-22 04:22:27] 2025-12-22 02:51:40,514 | INFO     | overall cleanup function is called
[2025-12-22 04:22:27] 2025-12-22 02:51:41,605 | INFO     | --- collectZombieJob: --- 10, [1358064]
[2025-12-22 04:22:27] 2025-12-22 02:51:41,605 | INFO     | zombie collector waiting for pid 1358064
[2025-12-22 04:22:27] 2025-12-22 02:51:41,605 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-22 04:22:27] 2025-12-22 02:51:41,605 | INFO     | collected zombie processes
[2025-12-22 04:22:27] 2025-12-22 02:51:41,605 | INFO     | will attempt to kill all subprocesses of pid=1358064
[2025-12-22 04:22:27] 2025-12-22 02:51:42,458 | INFO     | PID=1335102 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-22 04:22:27] 2025-12-22 02:51:42,459 | INFO     | .. there are 79 such processes running
[2025-12-22 04:22:27] 2025-12-22 02:51:43,197 | INFO     | process IDs to be killed: [1358064] (in reverse order)
[2025-12-22 04:22:27] 2025-12-22 02:51:43,971 | WARNING  | found no corresponding commands to process id(s)
[2025-12-22 04:22:27] 2025-12-22 02:51:43,972 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-22 04:22:27] 2025-12-22 02:51:44,034 | INFO     | did not find any defunct processes belonging to 1358064
[2025-12-22 04:22:27] 2025-12-22 02:51:44,096 | INFO     | did not find any defunct processes belonging to 1358064
[2025-12-22 04:22:27] 2025-12-22 02:51:44,097 | INFO     | ready for new job
[2025-12-22 04:22:27] 2025-12-22 02:51:44,097 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-22 04:22:27] 2025-12-22 02:51:44,105 | INFO     | ***************************************
[2025-12-22 04:22:27] 2025-12-22 02:51:44,105 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-22 04:22:27] 2025-12-22 02:51:44,105 | INFO     | ***************************************
[2025-12-22 04:22:27] 2025-12-22 02:51:44,105 | INFO     | 
[2025-12-22 04:22:27] 2025-12-22 02:51:44,119 | INFO     | architecture information:
[2025-12-22 04:22:27] 2025-12-22 02:51:44,123 | INFO     | executing command: cat /etc/os-release
[2025-12-22 04:22:27] 2025-12-22 02:51:44,231 | INFO     | cat /etc/os-release:
[2025-12-22 04:22:27] NAME="CentOS Linux"
[2025-12-22 04:22:27] VERSION="7 (Core)"
[2025-12-22 04:22:27] ID="centos"
[2025-12-22 04:22:27] ID_LIKE="rhel fedora"
[2025-12-22 04:22:27] VERSION_ID="7"
[2025-12-22 04:22:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-22 04:22:27] ANSI_COLOR="0;31"
[2025-12-22 04:22:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-22 04:22:27] HOME_URL="https://www.centos.org/"
[2025-12-22 04:22:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-22 04:22:27] 
[2025-12-22 04:22:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-22 04:22:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-22 04:22:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-22 04:22:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-22 04:22:27] 
[2025-12-22 04:22:27] 2025-12-22 02:51:44,239 | INFO     | ***************************************
[2025-12-22 04:22:27] 2025-12-22 02:51:44,741 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2025-12-22 04:22:27] 2025-12-22 02:51:44,836 | INFO     | sufficient remaining disk space (1648231448576 B)
[2025-12-22 04:22:27] 2025-12-22 02:51:44,837 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-22 04:22:27] 2025-12-22 02:51:44,837 | INFO     | current server update state: UPDATING_FINAL
[2025-12-22 04:22:27] 2025-12-22 02:51:44,837 | INFO     | update_server=False
[2025-12-22 04:22:27] 2025-12-22 02:51:44,837 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-22 04:22:27] 2025-12-22 02:51:44,838 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-22 04:22:27] 2025-12-22 02:51:44,903 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-22 04:22:27] 2025-12-22 02:51:44,903 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-22 04:22:27] 2025-12-22 02:51:44,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-22 04:22:27] 2025-12-22 02:51:44,903 | INFO     | will abort loop
[2025-12-22 04:22:27] 2025-12-22 02:51:45,292 | INFO     | all payload control threads have been joined
[2025-12-22 04:22:27] 2025-12-22 02:51:45,328 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-22 04:22:27] 2025-12-22 02:51:45,343 | INFO     | all job control threads have been joined
[2025-12-22 04:22:27] 2025-12-22 02:51:45,356 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-22 04:22:27] 2025-12-22 02:51:45,573 | INFO     | all data control threads have been joined
[2025-12-22 04:22:27] 2025-12-22 02:51:45,843 | INFO     | [job] retrieve thread has finished
[2025-12-22 04:22:27] 2025-12-22 02:51:45,908 | INFO     | [job] job monitor thread has finished
[2025-12-22 04:22:27] 2025-12-22 02:51:46,008 | INFO     | [job] validate thread has finished
[2025-12-22 04:22:27] 2025-12-22 02:51:46,025 | INFO     | [payload] execute_payloads thread has finished
[2025-12-22 04:22:27] 2025-12-22 02:51:46,299 | INFO     | [payload] control thread has finished
[2025-12-22 04:22:27] 2025-12-22 02:51:46,334 | INFO     | [job] queue monitor thread has finished
[2025-12-22 04:22:27] 2025-12-22 02:51:46,351 | INFO     | [job] control thread has finished
[2025-12-22 04:22:27] 2025-12-22 02:51:46,421 | INFO     | [payload] failed_post thread has finished
[2025-12-22 04:22:27] 2025-12-22 02:51:46,518 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-22 04:22:27] 2025-12-22 02:51:46,576 | INFO     | [job] create_data_payload thread has finished
[2025-12-22 04:22:27] 2025-12-22 02:51:46,579 | INFO     | [data] control thread has finished
[2025-12-22 04:22:27] 2025-12-22 02:51:46,899 | INFO     | [payload] validate_post thread has finished
[2025-12-22 04:22:27] 2025-12-22 02:51:47,054 | INFO     | [payload] validate_pre thread has finished
[2025-12-22 04:22:27] 2025-12-22 02:51:47,056 | INFO     | [data] copytool_in thread has finished
[2025-12-22 04:22:27] 2025-12-22 02:51:47,365 | INFO     | [data] copytool_out thread has finished
[2025-12-22 04:22:27] 2025-12-22 02:51:48,861 | INFO     | [data] queue_monitor thread has finished
[2025-12-22 04:22:27] 2025-12-22 02:52:15,936 | INFO     | PID=1335102 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-22 04:22:27] 2025-12-22 02:52:15,936 | INFO     | .. there are 79 such processes running
[2025-12-22 04:22:27] 2025-12-22 02:52:15,936 | INFO     | found 0 job(s) in 20 queues
[2025-12-22 04:22:27] 2025-12-22 02:52:15,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-22 04:22:27] 2025-12-22 02:52:15,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-22 04:22:27] 2025-12-22 02:52:35,328 | INFO     | [monitor] cgroup control has ended
[2025-12-22 04:22:27] 2025-12-22 02:52:37,225 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140025542793024)>', '<ExcThread(monitor, started 140025186477824)>']
[2025-12-22 04:22:27] 2025-12-22 02:52:38,089 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-22 04:22:27] 2025-12-22 02:52:38,089 | INFO     | [monitor] control thread has ended
[2025-12-22 04:22:27] 2025-12-22 02:52:42,250 | INFO     | all workflow threads have been joined
[2025-12-22 04:22:27] 2025-12-22 02:52:42,250 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-22 04:22:27] 2025-12-22 02:52:42,251 | INFO     | traces error code: 0
[2025-12-22 04:22:27] 2025-12-22 02:52:42,251 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-22 04:22:27] 2025-12-22 02:52:42,662 [wrapper] ==== pilot stdout END ====
[2025-12-22 04:22:27] 2025-12-22 02:52:42,689 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-22 04:22:27] 2025-12-22 02:52:42,703 [wrapper] pilotpid: 1335102
[2025-12-22 04:22:27] 2025-12-22 02:52:42,745 [wrapper] Pilot exit status: 0
[2025-12-22 04:22:27] 2025-12-22 02:52:42,904 [wrapper] pandaids: 6937445905
[2025-12-22 04:22:27] 2025-12-22 02:52:43,442 [wrapper] cleanup supervisor_pilot 3747564 1335103
[2025-12-22 04:22:27] 2025-12-22 02:52:43,480 [wrapper] Test setup, not cleaning
[2025-12-22 04:22:27] 2025-12-22 02:52:43,523 [wrapper] apfmon messages muted
[2025-12-22 04:22:27] 2025-12-22 02:52:43,558 [wrapper] ==== wrapper stdout END ====
[2025-12-22 04:22:27] 2025-12-22 02:52:43,585 [wrapper] ==== wrapper stderr END ====
[2025-12-22 04:22:27]  *** Error codes and diagnostics ***
[2025-12-22 04:22:27]     "exeErrorCode": 0,
[2025-12-22 04:22:27]     "exeErrorDiag": "",
[2025-12-22 04:22:27]     "pilotErrorCode": 0,
[2025-12-22 04:22:27]     "pilotErrorDiag": "",
[2025-12-22 04:22:27]  *** Listing of results directory ***
[2025-12-22 04:22:27] total 1244604
[2025-12-22 04:22:27] -rwx------ 1 boinc boinc     36322 Dec 20 06:08 runpilot2-wrapper.sh
[2025-12-22 04:22:27] -rw-r--r-- 1 boinc boinc      5112 Dec 20 06:13 queuedata.json
[2025-12-22 04:22:27] -rw-r--r-- 1 boinc boinc    579449 Dec 20 06:13 pilot3.tar.gz
[2025-12-22 04:22:27] -rw-r--r-- 1 boinc boinc       100 Dec 21 16:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-22 04:22:27] -rwxr-xr-x 1 boinc boinc      7986 Dec 21 16:15 run_atlas
[2025-12-22 04:22:27] -rw-r--r-- 1 boinc boinc       105 Dec 21 16:15 job.xml
[2025-12-22 04:22:27] -rw-r--r-- 2 boinc boinc 391996996 Dec 21 16:15 EVNT.47961000._000031.pool.root.1
[2025-12-22 04:22:27] -rw-r--r-- 1 boinc boinc      6675 Dec 21 16:15 init_data.xml
[2025-12-22 04:22:27] -rw-r--r-- 2 boinc boinc     15847 Dec 21 16:15 start_atlas.sh
[2025-12-22 04:22:27] drwxrwx--x 2 boinc boinc      4096 Dec 21 16:15 shared
[2025-12-22 04:22:27] -rw-r--r-- 2 boinc boinc    592609 Dec 21 16:15 input.tar.gz
[2025-12-22 04:22:27] -rw-r--r-- 1 boinc boinc         0 Dec 21 16:15 boinc_lockfile
[2025-12-22 04:22:27] -rw-r--r-- 1 boinc boinc      2892 Dec 21 16:16 pandaJob.out
[2025-12-22 04:22:27] -rw------- 1 boinc boinc    988146 Dec 21 16:18 agis_schedconf.cvmfs.json
[2025-12-22 04:22:27] drwx------ 5 boinc boinc      4096 Dec 21 16:18 pilot3
[2025-12-22 04:22:27] -rw-r--r-- 1 boinc boinc       532 Dec 22 03:16 boinc_task_state.xml
[2025-12-22 04:22:27] -rw------- 1 boinc boinc 862990978 Dec 22 03:49 HITS.47961002._000285.pool.root.1
[2025-12-22 04:22:27] -rw------- 1 boinc boinc      1037 Dec 22 03:50 memory_monitor_summary.json
[2025-12-22 04:22:27] -rw------- 1 boinc boinc   1516240 Dec 22 03:50 agis_ddmendpoints.agis.ALL.json
[2025-12-22 04:22:27] -rw------- 1 boinc boinc   2352469 Dec 22 03:50 log.47961002._000285.job.log.tgz.1
[2025-12-22 04:22:27] -rw------- 1 boinc boinc        95 Dec 22 03:51 pilot_heartbeat.json
[2025-12-22 04:22:27] -rw------- 1 boinc boinc      8596 Dec 22 03:51 heartbeat.json
[2025-12-22 04:22:27] -rw------- 1 boinc boinc      5013 Dec 22 03:52 pilotlog.txt
[2025-12-22 04:22:27] -rw------- 1 boinc boinc   5428201 Dec 22 03:52 log.47961002._000285.job.log.1
[2025-12-22 04:22:27] -rw------- 1 boinc boinc       353 Dec 22 03:52 output.list
[2025-12-22 04:22:27] -rw-r--r-- 1 boinc boinc       620 Dec 22 03:52 runtime_log
[2025-12-22 04:22:27] -rw------- 1 boinc boinc   7802880 Dec 22 03:52 result.tar.gz
[2025-12-22 04:22:27] -rw------- 1 boinc boinc       671 Dec 22 03:52 So0NDm0N4q8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvjcKDmJJJRvn.diag
[2025-12-22 04:22:27] -rw-r--r-- 1 boinc boinc      8881 Dec 22 03:52 runtime_log.err
[2025-12-22 04:22:27] -rw-r--r-- 1 boinc boinc        28 Dec 22 04:22 wrapper_checkpoint.txt
[2025-12-22 04:22:27] -rw-r--r-- 1 boinc boinc      8192 Dec 22 04:22 boinc_mmap_file
[2025-12-22 04:22:27] -rw-r--r-- 1 boinc boinc     21809 Dec 22 04:22 stderr.txt
[2025-12-22 04:22:27] HITS file was successfully produced:
[2025-12-22 04:22:27] -rw------- 1 boinc boinc 862990978 Dec 22 03:49 shared/HITS.pool.root.1
[2025-12-22 04:22:27]  *** Contents of shared directory: ***
[2025-12-22 04:22:27] total 1233804
[2025-12-22 04:22:27] -rw-r--r-- 2 boinc boinc 391996996 Dec 21 16:15 ATLAS.root_0
[2025-12-22 04:22:27] -rw-r--r-- 2 boinc boinc     15847 Dec 21 16:15 start_atlas.sh
[2025-12-22 04:22:27] -rw-r--r-- 2 boinc boinc    592609 Dec 21 16:15 input.tar.gz
[2025-12-22 04:22:27] -rw------- 1 boinc boinc 862990978 Dec 22 03:49 HITS.pool.root.1
[2025-12-22 04:22:27] -rw------- 1 boinc boinc   7802880 Dec 22 03:52 result.tar.gz
04:22:28 (1323719): run_atlas exited; CPU time 264547.687513
04:22:28 (1323719): called boinc_finish(0)

</stderr_txt>
]]>

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