Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:09:08 (412166): wrapper (7.7.26015): starting
02:09:08 (412166): wrapper: running run_atlas (--nthreads 4)
[2025-12-22 02:09:08] Arguments: --nthreads 4
[2025-12-22 02:09:08] Threads: 4
[2025-12-22 02:09:08] Checking for CVMFS
[2025-12-22 02:09:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-22 02:09:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-22 02:09:08] Running cvmfs_config stat atlas.cern.ch
[2025-12-22 02:09:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-22 02:09:09] 2.9.2.0 912017 12529 103140 154279 0 81 31894274 36864001 0 130560 0 9837633 99.991 448134 8622 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-22 02:09:09] CVMFS is ok
[2025-12-22 02:09:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-22 02:09:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-22 02:09:09] Further information can be found at the LHC@home message board.
[2025-12-22 02:09:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-22 02:09:09] Checking for apptainer binary...
[2025-12-22 02:09:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-22 02:09:09] Running /usr/bin/apptainer --version
[2025-12-22 02:09:09] apptainer version 1.4.1-1.1
[2025-12-22 02:09:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-22 02:09:09] thA315b
[2025-12-22 02:09:09] apptainer works
[2025-12-22 02:09:09] Set ATHENA_PROC_NUMBER=4
[2025-12-22 02:09:09] Set ATHENA_CORE_NUMBER=4
[2025-12-22 02:09:09] Starting ATLAS job with PandaID=6937804606
[2025-12-22 02:09:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-22 09:58:07]  *** The last 200 lines of the pilot log: ***
[2025-12-22 09:58:07] 2025-12-22 08:57:36,886 | INFO     | update_server=False
[2025-12-22 09:58:07] 2025-12-22 08:57:36,886 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-22 09:58:07] 2025-12-22 08:57:36,887 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-22 09:58:07] 2025-12-22 08:57:36,887 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-22 09:58:07] 2025-12-22 08:57:36,987 | INFO     | all data control threads have been joined
[2025-12-22 09:58:07] 2025-12-22 08:57:37,035 | INFO     | all job control threads have been joined
[2025-12-22 09:58:07] 2025-12-22 08:57:37,682 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-22 09:58:07] 2025-12-22 08:57:37,871 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-22 09:58:07] 2025-12-22 08:57:37,872 | INFO     | aborting loop
[2025-12-22 09:58:07] 2025-12-22 08:57:37,892 | INFO     | [job] queue monitor thread has finished
[2025-12-22 09:58:07] 2025-12-22 08:57:37,893 | INFO     | [job] retrieve thread has finished
[2025-12-22 09:58:07] 2025-12-22 08:57:37,941 | INFO     | all payload control threads have been joined
[2025-12-22 09:58:07] 2025-12-22 08:57:37,993 | INFO     | [data] control thread has finished
[2025-12-22 09:58:07] 2025-12-22 08:57:38,041 | INFO     | [job] control thread has finished
[2025-12-22 09:58:07] 2025-12-22 08:57:38,083 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-22 09:58:07] 2025-12-22 08:57:38,412 | INFO     | [payload] validate_post thread has finished
[2025-12-22 09:58:07] 2025-12-22 08:57:38,673 | INFO     | [data] copytool_in thread has finished
[2025-12-22 09:58:07] 2025-12-22 08:57:38,674 | INFO     | [job] validate thread has finished
[2025-12-22 09:58:07] 2025-12-22 08:57:38,765 | INFO     | [payload] validate_pre thread has finished
[2025-12-22 09:58:07] 2025-12-22 08:57:38,766 | INFO     | [job] create_data_payload thread has finished
[2025-12-22 09:58:07] 2025-12-22 08:57:38,877 | INFO     | [job] job monitor thread has finished
[2025-12-22 09:58:07] 2025-12-22 08:57:38,893 | INFO     | [data] copytool_out thread has finished
[2025-12-22 09:58:07] 2025-12-22 08:57:38,947 | INFO     | [payload] control thread has finished
[2025-12-22 09:58:07] 2025-12-22 08:57:39,374 | INFO     | [payload] failed_post thread has finished
[2025-12-22 09:58:07] 2025-12-22 08:57:39,392 | INFO     | [payload] execute_payloads thread has finished
[2025-12-22 09:58:07] 2025-12-22 08:57:41,689 | INFO     | [data] queue_monitor thread has finished
[2025-12-22 09:58:07] 2025-12-22 08:57:51,720 | INFO     | [monitor] cgroup control has ended
[2025-12-22 09:58:07] 2025-12-22 08:57:52,282 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139846758926144)>', '<ExcThread(monitor, started 139846098065152)>']
[2025-12-22 09:58:07] 2025-12-22 08:57:57,307 | INFO     | all workflow threads have been joined
[2025-12-22 09:58:07] 2025-12-22 08:57:57,308 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-22 09:58:07] 2025-12-22 08:57:57,308 | INFO     | traces error code: 0
[2025-12-22 09:58:07] 2025-12-22 08:57:57,308 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-22 09:58:07] 2025-12-22 08:58:07,099 | INFO     | PID=415956 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-22 09:58:07] 2025-12-22 08:58:07,099 | INFO     | found 0 job(s) in 20 queues
[2025-12-22 09:58:07] 2025-12-22 08:58:07,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-22 09:58:07] 2025-12-22 08:58:07,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-22 09:58:07] 2025-12-22 08:58:07,100 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-22 09:58:07] 2025-12-22 08:58:07,100 | INFO     | [monitor] control thread has ended
[2025-12-22 09:58:07] 2025-12-22 08:58:07,151 [wrapper] ==== pilot stdout END ====
[2025-12-22 09:58:07] 2025-12-22 08:58:07,153 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-22 09:58:07] 2025-12-22 08:58:07,156 [wrapper] pilotpid: 415956
[2025-12-22 09:58:07] 2025-12-22 08:58:07,158 [wrapper] Pilot exit status: 0
[2025-12-22 09:58:07] 2025-12-22 08:58:07,166 [wrapper] pandaids: 6937804606
[2025-12-22 09:58:07] 2025-12-22 08:58:07,185 [wrapper] cleanup supervisor_pilot  469838 415957
[2025-12-22 09:58:07] 2025-12-22 08:58:07,188 [wrapper] Test setup, not cleaning
[2025-12-22 09:58:07] 2025-12-22 08:58:07,190 [wrapper] apfmon messages muted
[2025-12-22 09:58:07] 2025-12-22 08:58:07,193 [wrapper] ==== wrapper stdout END ====
[2025-12-22 09:58:07] 2025-12-22 08:58:07,195 [wrapper] ==== wrapper stderr END ====
[2025-12-22 09:58:07]  *** Error codes and diagnostics ***
[2025-12-22 09:58:07]     "exeErrorCode": 0,
[2025-12-22 09:58:07]     "exeErrorDiag": "",
[2025-12-22 09:58:07]     "pilotErrorCode": 0,
[2025-12-22 09:58:07]     "pilotErrorDiag": "",
[2025-12-22 09:58:07]  *** Listing of results directory ***
[2025-12-22 09:58:07] total 1393860
[2025-12-22 09:58:07] -rw-r--r-- 1 boinc boinc    579449 Dec 20 06:05 pilot3.tar.gz
[2025-12-22 09:58:07] -rw-r--r-- 1 boinc boinc      5112 Dec 20 06:05 queuedata.json
[2025-12-22 09:58:07] -rwx------ 1 boinc boinc     36322 Dec 20 06:05 runpilot2-wrapper.sh
[2025-12-22 09:58:07] -rw-r--r-- 1 boinc boinc       100 Dec 22 02:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-22 09:58:07] -rwxr-xr-x 1 boinc boinc      7986 Dec 22 02:09 run_atlas
[2025-12-22 09:58:07] -rw-r--r-- 1 boinc boinc       105 Dec 22 02:09 job.xml
[2025-12-22 09:58:07] -rw-r--r-- 2 boinc boinc 413908142 Dec 22 02:09 EVNT.47961014._000023.pool.root.1
[2025-12-22 09:58:07] drwxrwx--x 2 boinc boinc      4096 Dec 22 02:09 shared
[2025-12-22 09:58:07] -rw-r--r-- 2 boinc boinc    592601 Dec 22 02:09 input.tar.gz
[2025-12-22 09:58:07] -rw-r--r-- 2 boinc boinc     15847 Dec 22 02:09 start_atlas.sh
[2025-12-22 09:58:07] -rw-r--r-- 1 boinc boinc         0 Dec 22 02:09 boinc_setup_complete
[2025-12-22 09:58:07] -rw-r--r-- 1 boinc boinc      6443 Dec 22 02:09 init_data.xml
[2025-12-22 09:58:07] -rw-r--r-- 1 boinc boinc         0 Dec 22 02:09 boinc_lockfile
[2025-12-22 09:58:07] -rw-r--r-- 1 boinc boinc      2877 Dec 22 02:09 pandaJob.out
[2025-12-22 09:58:07] -rw------- 1 boinc boinc    988254 Dec 22 02:09 agis_schedconf.cvmfs.json
[2025-12-22 09:58:07] drwx------ 5 boinc boinc      4096 Dec 22 02:09 pilot3
[2025-12-22 09:58:07] -rw-r--r-- 1 boinc boinc       532 Dec 22 09:54 boinc_task_state.xml
[2025-12-22 09:58:07] -rw------- 1 boinc boinc 999020107 Dec 22 09:57 HITS.47961022._000227.pool.root.1
[2025-12-22 09:58:07] -rw------- 1 boinc boinc      1024 Dec 22 09:57 memory_monitor_summary.json
[2025-12-22 09:58:07] -rw------- 1 boinc boinc   1516240 Dec 22 09:57 agis_ddmendpoints.agis.ALL.json
[2025-12-22 09:58:07] -rw------- 1 boinc boinc   1292066 Dec 22 09:57 log.47961022._000227.job.log.tgz.1
[2025-12-22 09:58:07] -rw------- 1 boinc boinc      8582 Dec 22 09:57 heartbeat.json
[2025-12-22 09:58:07] -rw-r--r-- 1 boinc boinc        29 Dec 22 09:57 wrapper_checkpoint.txt
[2025-12-22 09:58:07] -rw-r--r-- 1 boinc boinc      8192 Dec 22 09:57 boinc_mmap_file
[2025-12-22 09:58:07] -rw------- 1 boinc boinc       746 Dec 22 09:58 pilotlog.txt
[2025-12-22 09:58:07] -rw------- 1 boinc boinc        95 Dec 22 09:58 pilot_heartbeat.json
[2025-12-22 09:58:07] -rw------- 1 boinc boinc   3951907 Dec 22 09:58 log.47961022._000227.job.log.1
[2025-12-22 09:58:07] -rw------- 1 boinc boinc       353 Dec 22 09:58 output.list
[2025-12-22 09:58:07] -rw-r--r-- 1 boinc boinc       620 Dec 22 09:58 runtime_log
[2025-12-22 09:58:07] -rw------- 1 boinc boinc   5263360 Dec 22 09:58 result.tar.gz
[2025-12-22 09:58:07] -rw-r--r-- 1 boinc boinc      8903 Dec 22 09:58 runtime_log.err
[2025-12-22 09:58:07] -rw------- 1 boinc boinc       667 Dec 22 09:58 1pZLDmEL4q8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKJhKDmSn6xvm.diag
[2025-12-22 09:58:07] -rw-r--r-- 1 boinc boinc      7413 Dec 22 09:58 stderr.txt
[2025-12-22 09:58:07] HITS file was successfully produced:
[2025-12-22 09:58:07] -rw------- 1 boinc boinc 999020107 Dec 22 09:57 shared/HITS.pool.root.1
[2025-12-22 09:58:07]  *** Contents of shared directory: ***
[2025-12-22 09:58:07] total 1385560
[2025-12-22 09:58:07] -rw-r--r-- 2 boinc boinc 413908142 Dec 22 02:09 ATLAS.root_0
[2025-12-22 09:58:07] -rw-r--r-- 2 boinc boinc    592601 Dec 22 02:09 input.tar.gz
[2025-12-22 09:58:07] -rw-r--r-- 2 boinc boinc     15847 Dec 22 02:09 start_atlas.sh
[2025-12-22 09:58:07] -rw------- 1 boinc boinc 999020107 Dec 22 09:57 HITS.pool.root.1
[2025-12-22 09:58:07] -rw------- 1 boinc boinc   5263360 Dec 22 09:58 result.tar.gz
09:58:08 (412166): run_atlas exited; CPU time 110531.486510
09:58:08 (412166): called boinc_finish(0)

</stderr_txt>
]]>

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