Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:22:48 (850991): wrapper (7.7.26015): starting
22:22:48 (850991): wrapper: running run_atlas (--nthreads 4)
[2025-12-21 22:22:48] Arguments: --nthreads 4
[2025-12-21 22:22:48] Threads: 4
[2025-12-21 22:22:48] Checking for CVMFS
[2025-12-21 22:22:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-21 22:22:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-21 22:22:48] Running cvmfs_config stat atlas.cern.ch
[2025-12-21 22:22:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-21 22:22:48] 2.9.2.0 4066 3827 93656 154274 0 56 26515185 36864001 0 130560 0 2280934 99.989 135322 4035 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-21 22:22:48] CVMFS is ok
[2025-12-21 22:22:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-21 22:22:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-21 22:22:48] Further information can be found at the LHC@home message board.
[2025-12-21 22:22:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-21 22:22:48] Checking for apptainer binary...
[2025-12-21 22:22:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-21 22:22:48] Running /usr/bin/apptainer --version
[2025-12-21 22:22:48] apptainer version 1.4.1-1.1
[2025-12-21 22:22:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-21 22:22:48] atlasA237
[2025-12-21 22:22:48] apptainer works
[2025-12-21 22:22:48] Set ATHENA_PROC_NUMBER=4
[2025-12-21 22:22:48] Set ATHENA_CORE_NUMBER=4
[2025-12-21 22:22:48] Starting ATLAS job with PandaID=6938032280
[2025-12-21 22:22:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-22 07:14:44]  *** The last 200 lines of the pilot log: ***
[2025-12-22 07:14:44] ID="centos"
[2025-12-22 07:14:44] ID_LIKE="rhel fedora"
[2025-12-22 07:14:44] VERSION_ID="7"
[2025-12-22 07:14:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-22 07:14:44] ANSI_COLOR="0;31"
[2025-12-22 07:14:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-22 07:14:44] HOME_URL="https://www.centos.org/"
[2025-12-22 07:14:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-22 07:14:44] 
[2025-12-22 07:14:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-22 07:14:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-22 07:14:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-22 07:14:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-22 07:14:44] 
[2025-12-22 07:14:44] 2025-12-22 06:13:42,212 | INFO     | ***************************************
[2025-12-22 07:14:44] 2025-12-22 06:13:42,715 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-22 07:14:44] 2025-12-22 06:13:42,732 | INFO     | sufficient remaining disk space (333449265152 B)
[2025-12-22 07:14:44] 2025-12-22 06:13:42,733 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-22 07:14:44] 2025-12-22 06:13:42,733 | INFO     | current server update state: UPDATING_FINAL
[2025-12-22 07:14:44] 2025-12-22 06:13:42,733 | INFO     | update_server=False
[2025-12-22 07:14:44] 2025-12-22 06:13:42,733 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-22 07:14:44] 2025-12-22 06:13:42,733 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-22 07:14:44] 2025-12-22 06:13:42,733 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-22 07:14:44] 2025-12-22 06:13:42,824 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-22 07:14:44] 2025-12-22 06:13:42,824 | INFO     | aborting loop
[2025-12-22 07:14:44] 2025-12-22 06:13:43,051 | INFO     | all data control threads have been joined
[2025-12-22 07:14:44] 2025-12-22 06:13:43,739 | INFO     | [job] queue monitor thread has finished
[2025-12-22 07:14:44] 2025-12-22 06:13:43,739 | INFO     | [job] retrieve thread has finished
[2025-12-22 07:14:44] 2025-12-22 06:13:43,740 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-22 07:14:44] 2025-12-22 06:13:43,830 | INFO     | [job] job monitor thread has finished
[2025-12-22 07:14:44] 2025-12-22 06:13:44,057 | INFO     | [data] control thread has finished
[2025-12-22 07:14:44] 2025-12-22 06:13:44,115 | INFO     | all job control threads have been joined
[2025-12-22 07:14:44] 2025-12-22 06:13:44,168 | INFO     | [data] copytool_in thread has finished
[2025-12-22 07:14:44] 2025-12-22 06:13:44,208 | INFO     | all payload control threads have been joined
[2025-12-22 07:14:44] 2025-12-22 06:13:44,432 | INFO     | [payload] validate_post thread has finished
[2025-12-22 07:14:44] 2025-12-22 06:13:44,739 | INFO     | [data] copytool_out thread has finished
[2025-12-22 07:14:44] 2025-12-22 06:13:44,745 | INFO     | [job] validate thread has finished
[2025-12-22 07:14:44] 2025-12-22 06:13:44,870 | INFO     | [job] create_data_payload thread has finished
[2025-12-22 07:14:44] 2025-12-22 06:13:45,090 | INFO     | [payload] execute_payloads thread has finished
[2025-12-22 07:14:44] 2025-12-22 06:13:45,121 | INFO     | [job] control thread has finished
[2025-12-22 07:14:44] 2025-12-22 06:13:45,121 | INFO     | [payload] validate_pre thread has finished
[2025-12-22 07:14:44] 2025-12-22 06:13:45,172 | INFO     | [payload] failed_post thread has finished
[2025-12-22 07:14:44] 2025-12-22 06:13:45,214 | INFO     | [payload] control thread has finished
[2025-12-22 07:14:44] 2025-12-22 06:13:45,555 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-22 07:14:44] 2025-12-22 06:13:49,562 | INFO     | [data] queue_monitor thread has finished
[2025-12-22 07:14:44] 2025-12-22 06:14:12,724 | INFO     | PID=854787 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-22 07:14:44] 2025-12-22 06:14:12,725 | INFO     | found 0 job(s) in 20 queues
[2025-12-22 07:14:44] 2025-12-22 06:14:12,725 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-22 07:14:44] 2025-12-22 06:14:12,725 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-22 07:14:44] 2025-12-22 06:14:38,214 | INFO     | [monitor] cgroup control has ended
[2025-12-22 07:14:44] 2025-12-22 06:14:39,252 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139968789514048)>', '<ExcThread(monitor, started 139967548356352)>']
[2025-12-22 07:14:44] 2025-12-22 06:14:39,869 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-22 07:14:44] 2025-12-22 06:14:39,869 | INFO     | [monitor] control thread has ended
[2025-12-22 07:14:44] 2025-12-22 06:14:44,277 | INFO     | all workflow threads have been joined
[2025-12-22 07:14:44] 2025-12-22 06:14:44,278 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-22 07:14:44] 2025-12-22 06:14:44,278 | INFO     | traces error code: 0
[2025-12-22 07:14:44] 2025-12-22 06:14:44,278 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-22 07:14:44] 2025-12-22 06:14:44,347 [wrapper] ==== pilot stdout END ====
[2025-12-22 07:14:44] 2025-12-22 06:14:44,350 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-22 07:14:44] 2025-12-22 06:14:44,354 [wrapper] pilotpid: 854787
[2025-12-22 07:14:44] 2025-12-22 06:14:44,358 [wrapper] Pilot exit status: 0
[2025-12-22 07:14:44] 2025-12-22 06:14:44,369 [wrapper] pandaids: 6938032280
[2025-12-22 07:14:44] 2025-12-22 06:14:44,391 [wrapper] cleanup supervisor_pilot  916810 854788
[2025-12-22 07:14:44] 2025-12-22 06:14:44,394 [wrapper] Test setup, not cleaning
[2025-12-22 07:14:44] 2025-12-22 06:14:44,398 [wrapper] apfmon messages muted
[2025-12-22 07:14:44] 2025-12-22 06:14:44,401 [wrapper] ==== wrapper stdout END ====
[2025-12-22 07:14:44] 2025-12-22 06:14:44,404 [wrapper] ==== wrapper stderr END ====
[2025-12-22 07:14:44]  *** Error codes and diagnostics ***
[2025-12-22 07:14:44]     "exeErrorCode": 0,
[2025-12-22 07:14:44]     "exeErrorDiag": "",
[2025-12-22 07:14:44]     "pilotErrorCode": 0,
[2025-12-22 07:14:44]     "pilotErrorDiag": "",
[2025-12-22 07:14:44]  *** Listing of results directory ***
[2025-12-22 07:14:44] total 1399332
[2025-12-22 07:14:44] -rw-r--r-- 1 boinc boinc     579449 Dec 20 06:05 pilot3.tar.gz
[2025-12-22 07:14:44] -rw-r--r-- 1 boinc boinc       5112 Dec 20 06:05 queuedata.json
[2025-12-22 07:14:44] -rwx------ 1 boinc boinc      36322 Dec 20 06:05 runpilot2-wrapper.sh
[2025-12-22 07:14:44] -rw-r--r-- 1 boinc boinc        100 Dec 21 22:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-22 07:14:44] -rwxr-xr-x 1 boinc boinc       7986 Dec 21 22:22 run_atlas
[2025-12-22 07:14:44] -rw-r--r-- 1 boinc boinc        105 Dec 21 22:22 job.xml
[2025-12-22 07:14:44] -rw-r--r-- 2 boinc boinc  415191875 Dec 21 22:22 EVNT.47961454._000007.pool.root.1
[2025-12-22 07:14:44] -rw-r--r-- 2 boinc boinc     592594 Dec 21 22:22 input.tar.gz
[2025-12-22 07:14:44] -rw-r--r-- 2 boinc boinc      15847 Dec 21 22:22 start_atlas.sh
[2025-12-22 07:14:44] drwxrwx--x 2 boinc boinc       4096 Dec 21 22:22 shared
[2025-12-22 07:14:44] -rw-r--r-- 1 boinc boinc          0 Dec 21 22:22 boinc_setup_complete
[2025-12-22 07:14:44] -rw-r--r-- 1 boinc boinc       6372 Dec 21 22:22 init_data.xml
[2025-12-22 07:14:44] -rw-r--r-- 1 boinc boinc          0 Dec 21 22:22 boinc_lockfile
[2025-12-22 07:14:44] -rw-r--r-- 1 boinc boinc       2876 Dec 21 22:22 pandaJob.out
[2025-12-22 07:14:44] -rw------- 1 boinc boinc     988204 Dec 21 22:22 agis_schedconf.cvmfs.json
[2025-12-22 07:14:44] drwx------ 5 boinc boinc       4096 Dec 21 22:22 pilot3
[2025-12-22 07:14:44] -rw-r--r-- 1 boinc boinc        533 Dec 22 07:09 boinc_task_state.xml
[2025-12-22 07:14:44] -rw------- 1 boinc boinc 1002198227 Dec 22 07:13 HITS.47961456._000064.pool.root.1
[2025-12-22 07:14:44] -rw------- 1 boinc boinc       1025 Dec 22 07:13 memory_monitor_summary.json
[2025-12-22 07:14:44] -rw------- 1 boinc boinc    1516240 Dec 22 07:13 agis_ddmendpoints.agis.ALL.json
[2025-12-22 07:14:44] -rw------- 1 boinc boinc    1333449 Dec 22 07:13 log.47961456._000064.job.log.tgz.1
[2025-12-22 07:14:44] -rw------- 1 boinc boinc       8581 Dec 22 07:13 heartbeat.json
[2025-12-22 07:14:44] -rw------- 1 boinc boinc         95 Dec 22 07:14 pilot_heartbeat.json
[2025-12-22 07:14:44] -rw-r--r-- 1 boinc boinc       8192 Dec 22 07:14 boinc_mmap_file
[2025-12-22 07:14:44] -rw-r--r-- 1 boinc boinc         29 Dec 22 07:14 wrapper_checkpoint.txt
[2025-12-22 07:14:44] -rw------- 1 boinc boinc       4751 Dec 22 07:14 pilotlog.txt
[2025-12-22 07:14:44] -rw------- 1 boinc boinc    4474519 Dec 22 07:14 log.47961456._000064.job.log.1
[2025-12-22 07:14:44] -rw------- 1 boinc boinc        353 Dec 22 07:14 output.list
[2025-12-22 07:14:44] -rw-r--r-- 1 boinc boinc        620 Dec 22 07:14 runtime_log
[2025-12-22 07:14:44] -rw------- 1 boinc boinc    5826560 Dec 22 07:14 result.tar.gz
[2025-12-22 07:14:44] -rw-r--r-- 1 boinc boinc       8913 Dec 22 07:14 runtime_log.err
[2025-12-22 07:14:44] -rw------- 1 boinc boinc        669 Dec 22 07:14 8CcLDmEL4q8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqXcKDmYFttqm.diag
[2025-12-22 07:14:44] -rw-r--r-- 1 boinc boinc       8620 Dec 22 07:14 stderr.txt
[2025-12-22 07:14:44] HITS file was successfully produced:
[2025-12-22 07:14:44] -rw------- 1 boinc boinc 1002198227 Dec 22 07:13 shared/HITS.pool.root.1
[2025-12-22 07:14:44]  *** Contents of shared directory: ***
[2025-12-22 07:14:44] total 1390472
[2025-12-22 07:14:44] -rw-r--r-- 2 boinc boinc  415191875 Dec 21 22:22 ATLAS.root_0
[2025-12-22 07:14:44] -rw-r--r-- 2 boinc boinc     592594 Dec 21 22:22 input.tar.gz
[2025-12-22 07:14:44] -rw-r--r-- 2 boinc boinc      15847 Dec 21 22:22 start_atlas.sh
[2025-12-22 07:14:44] -rw------- 1 boinc boinc 1002198227 Dec 22 07:13 HITS.pool.root.1
[2025-12-22 07:14:44] -rw------- 1 boinc boinc    5826560 Dec 22 07:14 result.tar.gz
07:14:45 (850991): run_atlas exited; CPU time 125433.811781
07:14:45 (850991): called boinc_finish(0)

</stderr_txt>
]]>

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