Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:47:16 (31473): wrapper (7.7.26015): starting
03:47:16 (31473): wrapper: running run_atlas (--nthreads 8)
[2025-12-22 03:47:16] Arguments: --nthreads 8
[2025-12-22 03:47:16] Threads: 8
[2025-12-22 03:47:16] Checking for CVMFS
[2025-12-22 03:47:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-22 03:47:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-22 03:47:17] Running cvmfs_config stat atlas.cern.ch
[2025-12-22 03:47:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-22 03:47:18] 2.11.2.0 21086 8912 83396 154281 2 129 17672117 25165824 2525 130560 0 5396059 99.808 2930540 2156 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-22 03:47:18] CVMFS is ok
[2025-12-22 03:47:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-22 03:47:18] Checking for apptainer binary...
[2025-12-22 03:47:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-22 03:47:18] Running /usr/bin/apptainer --version
[2025-12-22 03:47:18] apptainer version 1.3.2-1.el7
[2025-12-22 03:47:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-22 03:47:24] cg-vwn408.simple-grid.lan
[2025-12-22 03:47:24] apptainer works
[2025-12-22 03:47:24] Set ATHENA_PROC_NUMBER=8
[2025-12-22 03:47:24] Set ATHENA_CORE_NUMBER=8
[2025-12-22 03:47:24] Starting ATLAS job with PandaID=6937802211
[2025-12-22 03:47:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-22 09:32:31]  *** The last 200 lines of the pilot log: ***
[2025-12-22 09:32:31] 2025-12-22 08:31:41,787 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-22 09:32:31] 2025-12-22 08:31:41,788 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-22 09:32:31] 2025-12-22 08:31:41,790 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6937802211/memory_monitor_summary.json (trf name=prmon)
[2025-12-22 09:32:31] 2025-12-22 08:31:41,791 | INFO     | extracted standard info from prmon json
[2025-12-22 09:32:31] 2025-12-22 08:31:41,791 | INFO     | extracted standard memory fields from prmon json
[2025-12-22 09:32:31] 2025-12-22 08:31:41,791 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-22 09:32:31] 2025-12-22 08:31:41,791 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-22 09:32:31] 2025-12-22 08:31:41,791 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-22 09:32:31] 2025-12-22 08:31:41,798 | INFO     | fitting pss+swap vs Time
[2025-12-22 09:32:31] 2025-12-22 08:31:41,799 | INFO     | sum of square deviations: 10743038637.5
[2025-12-22 09:32:31] 2025-12-22 08:31:41,803 | INFO     | sum of deviations: 133746977643.99997
[2025-12-22 09:32:31] 2025-12-22 08:31:41,803 | INFO     | mean x: 1766382237.5
[2025-12-22 09:32:31] 2025-12-22 08:31:41,803 | INFO     | mean y: 2451751.662576687
[2025-12-22 09:32:31] 2025-12-22 08:31:41,803 | INFO     | intersect: -21988373526.114532
[2025-12-22 09:32:31] 2025-12-22 08:31:41,804 | INFO     | chi2: 4.970753189341798
[2025-12-22 09:32:31] 2025-12-22 08:31:41,805 | INFO     | sum of square deviations: 10256266720.0
[2025-12-22 09:32:31] 2025-12-22 08:31:41,808 | INFO     | sum of deviations: 153003907336.0
[2025-12-22 09:32:31] 2025-12-22 08:31:41,808 | INFO     | mean x: 1766382085.0
[2025-12-22 09:32:31] 2025-12-22 08:31:41,808 | INFO     | mean y: 2457700.2834890964
[2025-12-22 09:32:31] 2025-12-22 08:31:41,809 | INFO     | intersect: -26348588760.53929
[2025-12-22 09:32:31] 2025-12-22 08:31:41,809 | INFO     | chi2: 4.217853285439586
[2025-12-22 09:32:31] 2025-12-22 08:31:41,809 | INFO     | current chi2=4.217853285439586 (change=15.14659600312821 %)
[2025-12-22 09:32:31] 2025-12-22 08:31:41,810 | INFO     | right removable region: 320
[2025-12-22 09:32:31] 2025-12-22 08:31:41,810 | INFO     | sum of square deviations: 10256266720.0
[2025-12-22 09:32:31] 2025-12-22 08:31:41,814 | INFO     | sum of deviations: 30050784105.0
[2025-12-22 09:32:31] 2025-12-22 08:31:41,814 | INFO     | mean x: 1766382390.0
[2025-12-22 09:32:31] 2025-12-22 08:31:41,814 | INFO     | mean y: 2484196.031152648
[2025-12-22 09:32:31] 2025-12-22 08:31:41,814 | INFO     | intersect: -5173002879.1298485
[2025-12-22 09:32:31] 2025-12-22 08:31:41,815 | INFO     | chi2: 1.1191495069191313
[2025-12-22 09:32:31] 2025-12-22 08:31:41,815 | INFO     | current chi2=1.1191495069191313 (change=77.48531330586295 %)
[2025-12-22 09:32:31] 2025-12-22 08:31:41,816 | INFO     | sum of square deviations: 9784425315.0
[2025-12-22 09:32:31] 2025-12-22 08:31:41,819 | INFO     | sum of deviations: 3474295717.5
[2025-12-22 09:32:31] 2025-12-22 08:31:41,819 | INFO     | mean x: 1766382542.5
[2025-12-22 09:32:31] 2025-12-22 08:31:41,819 | INFO     | mean y: 2492748.7183544305
[2025-12-22 09:32:31] 2025-12-22 08:31:41,819 | INFO     | intersect: -624721942.5181652
[2025-12-22 09:32:31] 2025-12-22 08:31:41,820 | INFO     | chi2: 0.8045429298680964
[2025-12-22 09:32:31] 2025-12-22 08:31:41,820 | INFO     | current chi2=0.8045429298680964 (change=28.111219734806003 %)
[2025-12-22 09:32:31] 2025-12-22 08:31:41,821 | INFO     | sum of square deviations: 9327281860.0
[2025-12-22 09:32:31] 2025-12-22 08:31:41,824 | INFO     | sum of deviations: 147851921.9999771
[2025-12-22 09:32:31] 2025-12-22 08:31:41,824 | INFO     | mean x: 1766382695.0
[2025-12-22 09:32:31] 2025-12-22 08:31:41,824 | INFO     | mean y: 2493845.40192926
[2025-12-22 09:32:31] 2025-12-22 08:31:41,824 | INFO     | intersect: -25506067.15172111
[2025-12-22 09:32:31] 2025-12-22 08:31:41,825 | INFO     | chi2: 0.7912458049261355
[2025-12-22 09:32:31] 2025-12-22 08:31:41,825 | INFO     | current chi2=0.7912458049261355 (change=1.65275517916004 %)
[2025-12-22 09:32:31] 2025-12-22 08:31:41,825 | INFO     | left removable region: 30
[2025-12-22 09:32:31] 2025-12-22 08:31:41,825 | INFO     | sum of square deviations: 7562532492.5
[2025-12-22 09:32:31] 2025-12-22 08:31:41,828 | INFO     | sum of deviations: 13446053313.5
[2025-12-22 09:32:31] 2025-12-22 08:31:41,828 | INFO     | mean x: 1766382969.5
[2025-12-22 09:32:31] 2025-12-22 08:31:41,829 | INFO     | mean y: 2503287.3896551724
[2025-12-22 09:32:31] 2025-12-22 08:31:41,829 | INFO     | intersect: -3138095394.79914
[2025-12-22 09:32:31] 2025-12-22 08:31:41,829 | INFO     | chi2: 0.00032693299988435364
[2025-12-22 09:32:31] 2025-12-22 08:31:41,829 | INFO     | current memory leak: 1.78 B/s (using 290 data points, chi2=0.00)
[2025-12-22 09:32:31] 2025-12-22 08:31:41,830 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2025-12-22 09:32:31] 2025-12-22 08:31:41,830 | INFO     | ..............................
[2025-12-22 09:32:31] 2025-12-22 08:31:41,830 | INFO     | . Timing measurements:
[2025-12-22 09:32:31] 2025-12-22 08:31:41,830 | INFO     | . get job = 0 s
[2025-12-22 09:32:31] 2025-12-22 08:31:41,831 | INFO     | . initial setup = 3 s
[2025-12-22 09:32:31] 2025-12-22 08:31:41,831 | INFO     | . payload setup = 128 s
[2025-12-22 09:32:31] 2025-12-22 08:31:41,831 | INFO     | . stage-in = 0 s
[2025-12-22 09:32:31] 2025-12-22 08:31:41,831 | INFO     | . payload execution = 20030 s
[2025-12-22 09:32:31] 2025-12-22 08:31:41,831 | INFO     | . stage-out = 3 s
[2025-12-22 09:32:31] 2025-12-22 08:31:41,831 | INFO     | . log creation = 1 s
[2025-12-22 09:32:31] 2025-12-22 08:31:41,831 | INFO     | ..............................
[2025-12-22 09:32:31] 2025-12-22 08:31:41,948 | INFO     | 
[2025-12-22 09:32:31] 2025-12-22 08:31:41,949 | INFO     | job summary report
[2025-12-22 09:32:31] 2025-12-22 08:31:41,949 | INFO     | --------------------------------------------------
[2025-12-22 09:32:31] 2025-12-22 08:31:41,949 | INFO     | PanDA job id: 6937802211
[2025-12-22 09:32:31] 2025-12-22 08:31:41,949 | INFO     | task id: 47898763
[2025-12-22 09:32:31] 2025-12-22 08:31:41,949 | INFO     | errors: (none)
[2025-12-22 09:32:31] 2025-12-22 08:31:41,949 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-22 09:32:31] 2025-12-22 08:31:41,949 | INFO     | pilot state: finished 
[2025-12-22 09:32:31] 2025-12-22 08:31:41,949 | INFO     | transexitcode: 0
[2025-12-22 09:32:31] 2025-12-22 08:31:41,950 | INFO     | exeerrorcode: 0
[2025-12-22 09:32:31] 2025-12-22 08:31:41,950 | INFO     | exeerrordiag: 
[2025-12-22 09:32:31] 2025-12-22 08:31:41,950 | INFO     | exitcode: 0
[2025-12-22 09:32:31] 2025-12-22 08:31:41,950 | INFO     | exitmsg: OK
[2025-12-22 09:32:31] 2025-12-22 08:31:41,950 | INFO     | cpuconsumptiontime: 76650 s
[2025-12-22 09:32:31] 2025-12-22 08:31:41,950 | INFO     | nevents: 400
[2025-12-22 09:32:31] 2025-12-22 08:31:41,950 | INFO     | neventsw: 0
[2025-12-22 09:32:31] 2025-12-22 08:31:41,950 | INFO     | pid: 9460
[2025-12-22 09:32:31] 2025-12-22 08:31:41,950 | INFO     | pgrp: 9460
[2025-12-22 09:32:31] 2025-12-22 08:31:41,950 | INFO     | corecount: 8
[2025-12-22 09:32:31] 2025-12-22 08:31:41,950 | INFO     | event service: False
[2025-12-22 09:32:31] 2025-12-22 08:31:41,951 | INFO     | sizes: {0: 2283788, 1: 2283987, 12: 2283987, 23: 2284015, 33: 2284043, 44: 2284099, 55: 2284255, 66: 2284283, 76: 2284311, 87: 2284367, 96: 2284657, 98: 2284965, 2
[2025-12-22 09:32:31] 2025-12-22 08:31:41,951 | INFO     | --------------------------------------------------
[2025-12-22 09:32:31] 2025-12-22 08:31:41,951 | INFO     | 
[2025-12-22 09:32:31] 2025-12-22 08:31:41,951 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-12-22 09:32:31] 2025-12-22 08:31:42,248 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-22 09:32:31] 2025-12-22 08:31:42,248 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-22 09:32:31] 2025-12-22 08:31:42,248 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-22 09:32:31] 2025-12-22 08:31:42,248 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-22 09:32:31] 2025-12-22 08:31:42,248 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-22 09:32:31] 2025-12-22 08:31:42,248 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-22 09:32:31] 2025-12-22 08:31:42,248 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-22 09:32:31] 2025-12-22 08:31:42,249 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-22 09:32:31] 2025-12-22 08:31:42,249 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-22 09:32:31] 2025-12-22 08:31:42,249 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-22 09:32:31] 2025-12-22 08:31:42,249 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-22 09:32:31] 2025-12-22 08:31:42,249 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-22 09:32:31] 2025-12-22 08:31:42,249 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-22 09:32:31] 2025-12-22 08:31:42,249 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-22 09:32:31] 2025-12-22 08:31:42,249 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-22 09:32:31] 2025-12-22 08:31:42,249 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-22 09:32:31] 2025-12-22 08:31:42,249 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-22 09:32:31] 2025-12-22 08:31:42,249 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-22 09:32:31] 2025-12-22 08:31:42,250 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-22 09:32:31] 2025-12-22 08:31:42,250 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-22 09:32:31] 2025-12-22 08:31:42,250 | INFO     | job 6937802211 has completed (purged errors)
[2025-12-22 09:32:31] 2025-12-22 08:31:42,250 | INFO     | overall cleanup function is called
[2025-12-22 09:32:31] 2025-12-22 08:31:43,259 | INFO     | --- collectZombieJob: --- 10, [9460]
[2025-12-22 09:32:31] 2025-12-22 08:31:43,259 | INFO     | zombie collector waiting for pid 9460
[2025-12-22 09:32:31] 2025-12-22 08:31:43,260 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-22 09:32:31] 2025-12-22 08:31:43,260 | INFO     | collected zombie processes
[2025-12-22 09:32:31] 2025-12-22 08:31:43,260 | INFO     | will attempt to kill all subprocesses of pid=9460
[2025-12-22 09:32:31] 2025-12-22 08:31:43,381 | INFO     | process IDs to be killed: [9460] (in reverse order)
[2025-12-22 09:32:31] 2025-12-22 08:31:44,047 | WARNING  | found no corresponding commands to process id(s)
[2025-12-22 09:32:31] 2025-12-22 08:31:44,047 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-22 09:32:31] 2025-12-22 08:31:44,050 | INFO     | did not find any defunct processes belonging to 9460
[2025-12-22 09:32:31] 2025-12-22 08:31:44,053 | INFO     | did not find any defunct processes belonging to 9460
[2025-12-22 09:32:31] 2025-12-22 08:31:44,053 | INFO     | ready for new job
[2025-12-22 09:32:31] 2025-12-22 08:31:44,053 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-22 09:32:31] 2025-12-22 08:31:44,056 | INFO     | ***************************************
[2025-12-22 09:32:31] 2025-12-22 08:31:44,056 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-22 09:32:31] 2025-12-22 08:31:44,056 | INFO     | ***************************************
[2025-12-22 09:32:31] 2025-12-22 08:31:44,056 | INFO     | 
[2025-12-22 09:32:31] 2025-12-22 08:31:44,056 | INFO     | pilot is running in a VM
[2025-12-22 09:32:31] 2025-12-22 08:31:44,057 | INFO     | architecture information:
[2025-12-22 09:32:31] 2025-12-22 08:31:44,058 | INFO     | executing command: cat /etc/os-release
[2025-12-22 09:32:31] 2025-12-22 08:31:44,076 | INFO     | cat /etc/os-release:
[2025-12-22 09:32:31] NAME="CentOS Linux"
[2025-12-22 09:32:31] VERSION="7 (Core)"
[2025-12-22 09:32:31] ID="centos"
[2025-12-22 09:32:31] ID_LIKE="rhel fedora"
[2025-12-22 09:32:31] VERSION_ID="7"
[2025-12-22 09:32:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-22 09:32:31] ANSI_COLOR="0;31"
[2025-12-22 09:32:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-22 09:32:31] HOME_URL="https://www.centos.org/"
[2025-12-22 09:32:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-22 09:32:31] 
[2025-12-22 09:32:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-22 09:32:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-22 09:32:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-22 09:32:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-22 09:32:31] 
[2025-12-22 09:32:31] 2025-12-22 08:31:44,077 | INFO     | ***************************************
[2025-12-22 09:32:31] 2025-12-22 08:31:44,580 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-12-22 09:32:31] 2025-12-22 08:31:44,634 | INFO     | sufficient remaining disk space (497292410880 B)
[2025-12-22 09:32:31] 2025-12-22 08:31:44,634 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-22 09:32:31] 2025-12-22 08:31:44,634 | INFO     | current server update state: UPDATING_FINAL
[2025-12-22 09:32:31] 2025-12-22 08:31:44,634 | INFO     | update_server=False
[2025-12-22 09:32:31] 2025-12-22 08:31:44,634 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-22 09:32:31] 2025-12-22 08:31:44,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-22 09:32:31] 2025-12-22 08:31:44,642 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-22 09:32:31] 2025-12-22 08:31:44,643 | INFO     | aborting loop
[2025-12-22 09:32:31] 2025-12-22 08:31:44,974 | INFO     | all data control threads have been joined
[2025-12-22 09:32:31] 2025-12-22 08:31:45,641 | INFO     | [job] retrieve thread has finished
[2025-12-22 09:32:31] 2025-12-22 08:31:45,649 | INFO     | [job] job monitor thread has finished
[2025-12-22 09:32:31] 2025-12-22 08:31:45,749 | INFO     | [data] copytool_in thread has finished
[2025-12-22 09:32:31] 2025-12-22 08:31:45,806 | INFO     | all job control threads have been joined
[2025-12-22 09:32:31] 2025-12-22 08:31:45,814 | INFO     | all payload control threads have been joined
[2025-12-22 09:32:31] 2025-12-22 08:31:45,883 | INFO     | [payload] validate_post thread has finished
[2025-12-22 09:32:31] 2025-12-22 08:31:45,980 | INFO     | [data] control thread has finished
[2025-12-22 09:32:31] 2025-12-22 08:31:46,213 | INFO     | [job] validate thread has finished
[2025-12-22 09:32:31] 2025-12-22 08:31:46,256 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-22 09:32:31] 2025-12-22 08:31:46,366 | INFO     | [payload] validate_pre thread has finished
[2025-12-22 09:32:31] 2025-12-22 08:31:46,641 | INFO     | [data] copytool_out thread has finished
[2025-12-22 09:32:31] 2025-12-22 08:31:46,642 | INFO     | [job] create_data_payload thread has finished
[2025-12-22 09:32:31] 2025-12-22 08:31:46,645 | INFO     | [payload] execute_payloads thread has finished
[2025-12-22 09:32:31] 2025-12-22 08:31:46,812 | INFO     | [job] control thread has finished
[2025-12-22 09:32:31] 2025-12-22 08:31:46,820 | INFO     | [payload] control thread has finished
[2025-12-22 09:32:31] 2025-12-22 08:31:46,874 | INFO     | [payload] failed_post thread has finished
[2025-12-22 09:32:31] 2025-12-22 08:31:46,966 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-22 09:32:31] 2025-12-22 08:31:47,972 | INFO     | [job] queue monitor thread has finished
[2025-12-22 09:32:31] 2025-12-22 08:31:50,265 | INFO     | [data] queue_monitor thread has finished
[2025-12-22 09:32:31] 2025-12-22 08:31:54,843 | INFO     | job.realtimelogging is not enabled
[2025-12-22 09:32:31] 2025-12-22 08:31:55,849 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-22 09:32:31] 2025-12-22 08:32:13,862 | INFO     | PID=2876 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-22 09:32:31] 2025-12-22 08:32:13,863 | INFO     | .. there are 9 such processes running
[2025-12-22 09:32:31] 2025-12-22 08:32:13,864 | INFO     | found 0 job(s) in 20 queues
[2025-12-22 09:32:31] 2025-12-22 08:32:13,864 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-22 09:32:31] 2025-12-22 08:32:13,864 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-22 09:32:31] 2025-12-22 08:32:21,585 | INFO     | [monitor] cgroup control has ended
[2025-12-22 09:32:31] 2025-12-22 08:32:22,694 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140183091185472)>', '<ExcThread(monitor, started 140182791628544)>']
[2025-12-22 09:32:31] 2025-12-22 08:32:22,919 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-22 09:32:31] 2025-12-22 08:32:22,919 | INFO     | [monitor] control thread has ended
[2025-12-22 09:32:31] 2025-12-22 08:32:27,720 | INFO     | all workflow threads have been joined
[2025-12-22 09:32:31] 2025-12-22 08:32:27,720 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-22 09:32:31] 2025-12-22 08:32:27,721 | INFO     | traces error code: 0
[2025-12-22 09:32:31] 2025-12-22 08:32:27,721 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-22 09:32:31] 2025-12-22 08:32:27,877 [wrapper] ==== pilot stdout END ====
[2025-12-22 09:32:31] 2025-12-22 08:32:27,881 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-22 09:32:31] 2025-12-22 08:32:27,910 [wrapper] pilotpid: 2876
[2025-12-22 09:32:31] 2025-12-22 08:32:27,989 [wrapper] Pilot exit status: 0
[2025-12-22 09:32:31] 2025-12-22 08:32:28,478 [wrapper] pandaids: 6937802211
[2025-12-22 09:32:31] 2025-12-22 08:32:29,738 [wrapper] cleanup supervisor_pilot 27512 2877
[2025-12-22 09:32:31] 2025-12-22 08:32:29,849 [wrapper] Test setup, not cleaning
[2025-12-22 09:32:31] 2025-12-22 08:32:29,976 [wrapper] apfmon messages muted
[2025-12-22 09:32:31] 2025-12-22 08:32:30,046 [wrapper] ==== wrapper stdout END ====
[2025-12-22 09:32:31] 2025-12-22 08:32:30,166 [wrapper] ==== wrapper stderr END ====
[2025-12-22 09:32:31]  *** Error codes and diagnostics ***
[2025-12-22 09:32:31]     "exeErrorCode": 0,
[2025-12-22 09:32:31]     "exeErrorDiag": "",
[2025-12-22 09:32:31]     "pilotErrorCode": 0,
[2025-12-22 09:32:31]     "pilotErrorDiag": "",
[2025-12-22 09:32:31]  *** Listing of results directory ***
[2025-12-22 09:32:31] total 448268
[2025-12-22 09:32:31] -rw-r--r--. 1 boinc boinc    579449 Dec 20 06:05 pilot3.tar.gz
[2025-12-22 09:32:31] -rwx------. 1 boinc boinc     36322 Dec 20 06:05 runpilot2-wrapper.sh
[2025-12-22 09:32:31] -rw-r--r--. 1 boinc boinc      5112 Dec 20 06:05 queuedata.json
[2025-12-22 09:32:31] -rw-r--r--. 1 boinc boinc       100 Dec 22 03:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-22 09:32:31] -rwxr-xr-x. 1 boinc boinc      7986 Dec 22 03:47 run_atlas
[2025-12-22 09:32:31] -rw-r--r--. 1 boinc boinc       105 Dec 22 03:47 job.xml
[2025-12-22 09:32:31] -rw-r--r--. 2 boinc boinc 224861311 Dec 22 03:47 EVNT.47898761._000409.pool.root.1
[2025-12-22 09:32:31] -rw-r--r--. 1 boinc boinc      6391 Dec 22 03:47 init_data.xml
[2025-12-22 09:32:31] -rw-r--r--. 2 boinc boinc     15847 Dec 22 03:47 start_atlas.sh
[2025-12-22 09:32:31] drwxrwx--x. 2 boinc boinc        68 Dec 22 03:47 shared
[2025-12-22 09:32:31] -rw-r--r--. 2 boinc boinc    592405 Dec 22 03:47 input.tar.gz
[2025-12-22 09:32:31] -rw-r--r--. 1 boinc boinc         0 Dec 22 03:47 boinc_lockfile
[2025-12-22 09:32:31] -rw-r--r--. 1 boinc boinc      2509 Dec 22 03:47 pandaJob.out
[2025-12-22 09:32:31] -rw-------. 1 boinc boinc    988238 Dec 22 03:50 agis_schedconf.cvmfs.json
[2025-12-22 09:32:31] drwx------. 5 boinc boinc      4096 Dec 22 03:50 pilot3
[2025-12-22 09:32:31] -rw-------. 1 boinc boinc 223728844 Dec 22 09:28 HITS.47898763._026301.pool.root.1
[2025-12-22 09:32:31] -rw-r--r--. 1 boinc boinc       531 Dec 22 09:29 boinc_task_state.xml
[2025-12-22 09:32:31] -rw-------. 1 boinc boinc      1016 Dec 22 09:29 memory_monitor_summary.json
[2025-12-22 09:32:31] -rw-------. 1 boinc boinc   1516240 Dec 22 09:30 agis_ddmendpoints.agis.ALL.json
[2025-12-22 09:32:31] -rw-------. 1 boinc boinc    541704 Dec 22 09:30 log.47898763._026301.job.log.tgz.1
[2025-12-22 09:32:31] -rw-------. 1 boinc boinc      7778 Dec 22 09:31 heartbeat.json
[2025-12-22 09:32:31] -rw-r--r--. 1 boinc boinc      8192 Dec 22 09:32 boinc_mmap_file
[2025-12-22 09:32:31] -rw-r--r--. 1 boinc boinc        28 Dec 22 09:32 wrapper_checkpoint.txt
[2025-12-22 09:32:31] -rw-------. 1 boinc boinc        95 Dec 22 09:32 pilot_heartbeat.json
[2025-12-22 09:32:31] -rw-------. 1 boinc boinc      4955 Dec 22 09:32 pilotlog.txt
[2025-12-22 09:32:31] -rw-------. 1 boinc boinc   2726500 Dec 22 09:32 log.47898763._026301.job.log.1
[2025-12-22 09:32:31] -rw-------. 1 boinc boinc       357 Dec 22 09:32 output.list
[2025-12-22 09:32:31] -rw-r--r--. 1 boinc boinc       620 Dec 22 09:32 runtime_log
[2025-12-22 09:32:31] -rw-------. 1 boinc boinc   3287040 Dec 22 09:32 result.tar.gz
[2025-12-22 09:32:31] -rw-------. 1 boinc boinc       657 Dec 22 09:32 y9ENDmrK4q8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcFhKDmlj58Ro.diag
[2025-12-22 09:32:31] -rw-r--r--. 1 boinc boinc      8817 Dec 22 09:32 runtime_log.err
[2025-12-22 09:32:31] -rw-r--r--. 1 boinc boinc     20668 Dec 22 09:32 stderr.txt
[2025-12-22 09:32:31] HITS file was successfully produced:
[2025-12-22 09:32:31] -rw-------. 1 boinc boinc 223728844 Dec 22 09:28 shared/HITS.pool.root.1
[2025-12-22 09:32:31]  *** Contents of shared directory: ***
[2025-12-22 09:32:31] total 441888
[2025-12-22 09:32:31] -rw-r--r--. 2 boinc boinc 224861311 Dec 22 03:47 ATLAS.root_0
[2025-12-22 09:32:31] -rw-r--r--. 2 boinc boinc     15847 Dec 22 03:47 start_atlas.sh
[2025-12-22 09:32:31] -rw-r--r--. 2 boinc boinc    592405 Dec 22 03:47 input.tar.gz
[2025-12-22 09:32:31] -rw-------. 1 boinc boinc 223728844 Dec 22 09:28 HITS.pool.root.1
[2025-12-22 09:32:31] -rw-------. 1 boinc boinc   3287040 Dec 22 09:32 result.tar.gz
09:32:32 (31473): run_atlas exited; CPU time 76920.757410
09:32:32 (31473): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN