Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:12:49 (1093643): wrapper (7.7.26015): starting
19:12:49 (1093643): wrapper: running run_atlas (--nthreads 2)
[2025-12-21 19:12:49] Arguments: --nthreads 2
[2025-12-21 19:12:49] Threads: 2
[2025-12-21 19:12:49] Checking for CVMFS
[2025-12-21 19:12:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-21 19:12:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-21 19:12:49] Running cvmfs_config stat atlas.cern.ch
[2025-12-21 19:12:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-21 19:12:49] 2.9.2.0 574288 3313 61916 154269 0 57 36846287 36864001 0 130560 0 1360519 99.986 116802 4102 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-21 19:12:49] CVMFS is ok
[2025-12-21 19:12:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-21 19:12:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-21 19:12:49] Further information can be found at the LHC@home message board.
[2025-12-21 19:12:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-21 19:12:49] Checking for apptainer binary...
[2025-12-21 19:12:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-21 19:12:49] Running /usr/bin/apptainer --version
[2025-12-21 19:12:49] apptainer version 1.4.1-1.1
[2025-12-21 19:12:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-21 19:12:50] legendA165
[2025-12-21 19:12:50] apptainer works
[2025-12-21 19:12:50] Set ATHENA_PROC_NUMBER=2
[2025-12-21 19:12:50] Set ATHENA_CORE_NUMBER=2
[2025-12-21 19:12:50] Starting ATLAS job with PandaID=6935895190
[2025-12-21 19:12:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-21 21:17:18]  *** The last 200 lines of the pilot log: ***
[2025-12-21 21:17:18] 2025-12-21 20:16:10,072 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-21 21:17:18] 2025-12-21 20:16:10,476 | INFO     | monitor loop #567: job 0:6935895190 is in state 'finished'
[2025-12-21 21:17:18] 2025-12-21 20:16:10,477 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-21 21:17:18] 2025-12-21 20:16:11,892 | INFO     | time since job start (7389s) is within the limit (174528.0s)
[2025-12-21 21:17:18] 2025-12-21 20:16:12,980 | INFO     | monitor loop #568: job 0:6935895190 is in state 'finished'
[2025-12-21 21:17:18] 2025-12-21 20:16:12,980 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-21 21:17:18] 2025-12-21 20:16:13,898 | INFO     | time since job start (7391s) is within the limit (174528.0s)
[2025-12-21 21:17:18] 2025-12-21 20:16:15,483 | INFO     | monitor loop #569: job 0:6935895190 is in state 'finished'
[2025-12-21 21:17:18] 2025-12-21 20:16:15,483 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-21 21:17:18] 2025-12-21 20:16:15,903 | INFO     | time since job start (7393s) is within the limit (174528.0s)
[2025-12-21 21:17:18] 2025-12-21 20:16:16,418 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-21 21:17:18] 2025-12-21 20:16:16,419 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 3400.134375
[2025-12-21 21:17:18] 2025-12-21 20:16:16,420 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6935895190/memory_monitor_summary.json (trf name=prmon)
[2025-12-21 21:17:18] 2025-12-21 20:16:16,420 | INFO     | extracted standard info from prmon json
[2025-12-21 21:17:18] 2025-12-21 20:16:16,420 | INFO     | extracted standard memory fields from prmon json
[2025-12-21 21:17:18] 2025-12-21 20:16:16,420 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-21 21:17:18] 2025-12-21 20:16:16,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-21 21:17:18] 2025-12-21 20:16:16,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-21 21:17:18] 2025-12-21 20:16:16,421 | INFO     | fitting pss+swap vs Time
[2025-12-21 21:17:18] 2025-12-21 20:16:16,421 | INFO     | sum of square deviations: 549294020.0
[2025-12-21 21:17:18] 2025-12-21 20:16:16,422 | INFO     | sum of deviations: -3160947592.9999986
[2025-12-21 21:17:18] 2025-12-21 20:16:16,422 | INFO     | mean x: 1766344468.0
[2025-12-21 21:17:18] 2025-12-21 20:16:16,422 | INFO     | mean y: 2352687.1570247933
[2025-12-21 21:17:18] 2025-12-21 20:16:16,422 | INFO     | intersect: 10166894974.607128
[2025-12-21 21:17:18] 2025-12-21 20:16:16,422 | INFO     | chi2: 1.6210843503405579
[2025-12-21 21:17:18] 2025-12-21 20:16:16,422 | INFO     | sum of square deviations: 483971865.0
[2025-12-21 21:17:18] 2025-12-21 20:16:16,422 | INFO     | sum of deviations: -2569252076.4999986
[2025-12-21 21:17:18] 2025-12-21 20:16:16,422 | INFO     | mean x: 1766344315.5
[2025-12-21 21:17:18] 2025-12-21 20:16:16,422 | INFO     | mean y: 2354054.870689655
[2025-12-21 21:17:18] 2025-12-21 20:16:16,422 | INFO     | intersect: 9379311949.752335
[2025-12-21 21:17:18] 2025-12-21 20:16:16,423 | INFO     | chi2: 1.6220337433020358
[2025-12-21 21:17:18] 2025-12-21 20:16:16,423 | INFO     | current chi2=1.6220337433020358 (change=-0.058565302988610186 %)
[2025-12-21 21:17:18] 2025-12-21 20:16:16,423 | INFO     | right removable region: 115
[2025-12-21 21:17:18] 2025-12-21 20:16:16,423 | INFO     | sum of square deviations: 483971865.0
[2025-12-21 21:17:18] 2025-12-21 20:16:16,423 | INFO     | sum of deviations: -19533629717.999996
[2025-12-21 21:17:18] 2025-12-21 20:16:16,423 | INFO     | mean x: 1766344620.5
[2025-12-21 21:17:18] 2025-12-21 20:16:16,423 | INFO     | mean y: 2390067.4655172415
[2025-12-21 21:17:18] 2025-12-21 20:16:16,423 | INFO     | intersect: 71293975935.22711
[2025-12-21 21:17:18] 2025-12-21 20:16:16,423 | INFO     | chi2: 0.06740396708769172
[2025-12-21 21:17:18] 2025-12-21 20:16:16,423 | INFO     | current chi2=0.06740396708769172 (change=95.84204442702 %)
[2025-12-21 21:17:18] 2025-12-21 20:16:16,423 | INFO     | sum of square deviations: 424045160.0
[2025-12-21 21:17:18] 2025-12-21 20:16:16,424 | INFO     | sum of deviations: -16763689929.0
[2025-12-21 21:17:18] 2025-12-21 20:16:16,424 | INFO     | mean x: 1766344773.0
[2025-12-21 21:17:18] 2025-12-21 20:16:16,424 | INFO     | mean y: 2383019.585585586
[2025-12-21 21:17:18] 2025-12-21 20:16:16,424 | INFO     | intersect: 69830926947.03401
[2025-12-21 21:17:18] 2025-12-21 20:16:16,424 | INFO     | chi2: 0.06692690046430073
[2025-12-21 21:17:18] 2025-12-21 20:16:16,424 | INFO     | current chi2=0.06692690046430073 (change=0.7077723226146794 %)
[2025-12-21 21:17:18] 2025-12-21 20:16:16,424 | INFO     | left removable region: 20
[2025-12-21 21:17:18] 2025-12-21 20:16:16,424 | INFO     | sum of square deviations: 265828240.0
[2025-12-21 21:17:18] 2025-12-21 20:16:16,424 | INFO     | sum of deviations: -11816009208.999998
[2025-12-21 21:17:18] 2025-12-21 20:16:16,424 | INFO     | mean x: 1766344895.0
[2025-12-21 21:17:18] 2025-12-21 20:16:16,424 | INFO     | mean y: 2374177.1157894735
[2025-12-21 21:17:18] 2025-12-21 20:16:16,424 | INFO     | intersect: 78516032265.4744
[2025-12-21 21:17:18] 2025-12-21 20:16:16,424 | INFO     | chi2: 0.06055315711480889
[2025-12-21 21:17:18] 2025-12-21 20:16:16,425 | INFO     | current memory leak: -44.45 B/s (using 95 data points, chi2=0.06)
[2025-12-21 21:17:18] 2025-12-21 20:16:16,425 | INFO     | could have reported an average CPU frequency of 4352 MHz (8 samples)
[2025-12-21 21:17:18] 2025-12-21 20:16:16,425 | INFO     | ..............................
[2025-12-21 21:17:18] 2025-12-21 20:16:16,425 | INFO     | . Timing measurements:
[2025-12-21 21:17:18] 2025-12-21 20:16:16,425 | INFO     | . get job = 0 s
[2025-12-21 21:17:18] 2025-12-21 20:16:16,425 | INFO     | . initial setup = 1 s
[2025-12-21 21:17:18] 2025-12-21 20:16:16,425 | INFO     | . payload setup = 6 s
[2025-12-21 21:17:18] 2025-12-21 20:16:16,425 | INFO     | . stage-in = 0 s
[2025-12-21 21:17:18] 2025-12-21 20:16:16,425 | INFO     | . payload execution = 7358 s
[2025-12-21 21:17:18] 2025-12-21 20:16:16,425 | INFO     | . stage-out = 0 s
[2025-12-21 21:17:18] 2025-12-21 20:16:16,425 | INFO     | . log creation = 0 s
[2025-12-21 21:17:18] 2025-12-21 20:16:16,425 | INFO     | ..............................
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | 
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | job summary report
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | --------------------------------------------------
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | PanDA job id: 6935895190
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | task id: 47929392
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | errors: (none)
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | pilot state: finished 
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | transexitcode: 0
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | exeerrorcode: 0
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | exeerrordiag: 
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | exitcode: 0
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | exitmsg: OK
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | cpuconsumptiontime: 14322 s
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | nevents: 400
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | neventsw: 0
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | pid: 1103778
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | pgrp: 1103778
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | corecount: 2
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | event service: False
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | sizes: {0: 2284022, 1: 2284050, 7: 2284312, 11: 2284340, 7368: 2311969, 7369: 2311968, 7370: 2321212, 7377: 2321350}
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | --------------------------------------------------
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | 
[2025-12-21 21:17:18] 2025-12-21 20:16:16,460 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-21 21:17:18] 2025-12-21 20:16:16,471 | INFO     | job 6935895190 has completed (purged errors)
[2025-12-21 21:17:18] 2025-12-21 20:16:16,472 | INFO     | overall cleanup function is called
[2025-12-21 21:17:18] 2025-12-21 20:16:17,478 | INFO     | --- collectZombieJob: --- 10, [1103778]
[2025-12-21 21:17:18] 2025-12-21 20:16:17,478 | INFO     | zombie collector waiting for pid 1103778
[2025-12-21 21:17:18] 2025-12-21 20:16:17,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-21 21:17:18] 2025-12-21 20:16:17,478 | INFO     | collected zombie processes
[2025-12-21 21:17:18] 2025-12-21 20:16:17,479 | INFO     | will attempt to kill all subprocesses of pid=1103778
[2025-12-21 21:17:18] 2025-12-21 20:16:17,515 | INFO     | process IDs to be killed: [1103778] (in reverse order)
[2025-12-21 21:17:18] 2025-12-21 20:16:17,535 | WARNING  | found no corresponding commands to process id(s)
[2025-12-21 21:17:18] 2025-12-21 20:16:17,535 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-21 21:17:18] 2025-12-21 20:16:17,536 | INFO     | did not find any defunct processes belonging to 1103778
[2025-12-21 21:17:18] 2025-12-21 20:16:17,537 | INFO     | did not find any defunct processes belonging to 1103778
[2025-12-21 21:17:18] 2025-12-21 20:16:17,537 | INFO     | ready for new job
[2025-12-21 21:17:18] 2025-12-21 20:16:17,537 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-21 21:17:18] 2025-12-21 20:16:17,537 | INFO     | ***************************************
[2025-12-21 21:17:18] 2025-12-21 20:16:17,537 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-21 21:17:18] 2025-12-21 20:16:17,537 | INFO     | ***************************************
[2025-12-21 21:17:18] 2025-12-21 20:16:17,537 | INFO     | 
[2025-12-21 21:17:18] 2025-12-21 20:16:17,538 | INFO     | architecture information:
[2025-12-21 21:17:18] 2025-12-21 20:16:17,538 | INFO     | executing command: cat /etc/os-release
[2025-12-21 21:17:18] 2025-12-21 20:16:17,546 | INFO     | cat /etc/os-release:
[2025-12-21 21:17:18] NAME="CentOS Linux"
[2025-12-21 21:17:18] VERSION="7 (Core)"
[2025-12-21 21:17:18] ID="centos"
[2025-12-21 21:17:18] ID_LIKE="rhel fedora"
[2025-12-21 21:17:18] VERSION_ID="7"
[2025-12-21 21:17:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-21 21:17:18] ANSI_COLOR="0;31"
[2025-12-21 21:17:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-21 21:17:18] HOME_URL="https://www.centos.org/"
[2025-12-21 21:17:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-21 21:17:18] 
[2025-12-21 21:17:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-21 21:17:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-21 21:17:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-21 21:17:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-21 21:17:18] 
[2025-12-21 21:17:18] 2025-12-21 20:16:17,546 | INFO     | ***************************************
[2025-12-21 21:17:18] 2025-12-21 20:16:18,049 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-21 21:17:18] 2025-12-21 20:16:18,061 | INFO     | sufficient remaining disk space (174014332928 B)
[2025-12-21 21:17:18] 2025-12-21 20:16:18,061 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-21 21:17:18] 2025-12-21 20:16:18,061 | INFO     | current server update state: UPDATING_FINAL
[2025-12-21 21:17:18] 2025-12-21 20:16:18,062 | INFO     | update_server=False
[2025-12-21 21:17:18] 2025-12-21 20:16:18,062 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-21 21:17:18] 2025-12-21 20:16:18,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-21 21:17:18] 2025-12-21 20:16:18,116 | INFO     | all job control threads have been joined
[2025-12-21 21:17:18] 2025-12-21 20:16:18,252 | INFO     | all payload control threads have been joined
[2025-12-21 21:17:18] 2025-12-21 20:16:18,425 | INFO     | all data control threads have been joined
[2025-12-21 21:17:18] 2025-12-21 20:16:18,993 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-21 21:17:18] 2025-12-21 20:16:18,993 | INFO     | aborting loop
[2025-12-21 21:17:18] 2025-12-21 20:16:19,067 | INFO     | [job] queue monitor thread has finished
[2025-12-21 21:17:18] 2025-12-21 20:16:19,068 | INFO     | [job] retrieve thread has finished
[2025-12-21 21:17:18] 2025-12-21 20:16:19,122 | INFO     | [job] control thread has finished
[2025-12-21 21:17:18] 2025-12-21 20:16:19,179 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-21 21:17:18] 2025-12-21 20:16:19,234 | INFO     | [payload] failed_post thread has finished
[2025-12-21 21:17:18] 2025-12-21 20:16:19,258 | INFO     | [payload] control thread has finished
[2025-12-21 21:17:18] 2025-12-21 20:16:19,348 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-21 21:17:18] 2025-12-21 20:16:19,431 | INFO     | [data] control thread has finished
[2025-12-21 21:17:18] 2025-12-21 20:16:19,814 | INFO     | [payload] validate_post thread has finished
[2025-12-21 21:17:18] 2025-12-21 20:16:19,819 | INFO     | [job] validate thread has finished
[2025-12-21 21:17:18] 2025-12-21 20:16:19,895 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-21 21:17:18] 2025-12-21 20:16:19,999 | INFO     | [job] job monitor thread has finished
[2025-12-21 21:17:18] 2025-12-21 20:16:20,096 | INFO     | [job] create_data_payload thread has finished
[2025-12-21 21:17:18] 2025-12-21 20:16:20,246 | INFO     | [payload] validate_pre thread has finished
[2025-12-21 21:17:18] 2025-12-21 20:16:20,359 | INFO     | [data] copytool_in thread has finished
[2025-12-21 21:17:18] 2025-12-21 20:16:20,360 | INFO     | [payload] execute_payloads thread has finished
[2025-12-21 21:17:18] 2025-12-21 20:16:21,185 | INFO     | [data] copytool_out thread has finished
[2025-12-21 21:17:18] 2025-12-21 20:16:23,355 | INFO     | [data] queue_monitor thread has finished
[2025-12-21 21:17:18] 2025-12-21 20:16:49,016 | INFO     | PID=1097356 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-21 21:17:18] 2025-12-21 20:16:49,016 | INFO     | found 0 job(s) in 20 queues
[2025-12-21 21:17:18] 2025-12-21 20:16:49,016 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-21 21:17:18] 2025-12-21 20:16:49,016 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-21 21:17:18] 2025-12-21 20:17:11,871 | INFO     | [monitor] cgroup control has ended
[2025-12-21 21:17:18] 2025-12-21 20:17:13,480 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139971643778880)>', '<ExcThread(monitor, started 139970987661056)>']
[2025-12-21 21:17:18] 2025-12-21 20:17:14,151 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-21 21:17:18] 2025-12-21 20:17:14,151 | INFO     | [monitor] control thread has ended
[2025-12-21 21:17:18] 2025-12-21 20:17:18,485 | INFO     | all workflow threads have been joined
[2025-12-21 21:17:18] 2025-12-21 20:17:18,485 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-21 21:17:18] 2025-12-21 20:17:18,486 | INFO     | traces error code: 0
[2025-12-21 21:17:18] 2025-12-21 20:17:18,486 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-21 21:17:18] 2025-12-21 20:17:18,529 [wrapper] ==== pilot stdout END ====
[2025-12-21 21:17:18] 2025-12-21 20:17:18,532 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-21 21:17:18] 2025-12-21 20:17:18,534 [wrapper] pilotpid: 1097356
[2025-12-21 21:17:18] 2025-12-21 20:17:18,536 [wrapper] Pilot exit status: 0
[2025-12-21 21:17:18] 2025-12-21 20:17:18,541 [wrapper] pandaids: 6935895190
[2025-12-21 21:17:18] 2025-12-21 20:17:18,554 [wrapper] cleanup supervisor_pilot 1119142 1097357
[2025-12-21 21:17:18] 2025-12-21 20:17:18,557 [wrapper] Test setup, not cleaning
[2025-12-21 21:17:18] 2025-12-21 20:17:18,559 [wrapper] apfmon messages muted
[2025-12-21 21:17:18] 2025-12-21 20:17:18,561 [wrapper] ==== wrapper stdout END ====
[2025-12-21 21:17:18] 2025-12-21 20:17:18,563 [wrapper] ==== wrapper stderr END ====
[2025-12-21 21:17:18]  *** Error codes and diagnostics ***
[2025-12-21 21:17:18]     "exeErrorCode": 0,
[2025-12-21 21:17:18]     "exeErrorDiag": "",
[2025-12-21 21:17:18]     "pilotErrorCode": 0,
[2025-12-21 21:17:18]     "pilotErrorDiag": "",
[2025-12-21 21:17:18]  *** Listing of results directory ***
[2025-12-21 21:17:18] total 431320
[2025-12-21 21:17:18] -rw-r--r-- 1 boinc boinc      5112 Dec 19 20:58 queuedata.json
[2025-12-21 21:17:18] -rw-r--r-- 1 boinc boinc    579449 Dec 19 20:58 pilot3.tar.gz
[2025-12-21 21:17:18] -rwx------ 1 boinc boinc     36322 Dec 19 20:59 runpilot2-wrapper.sh
[2025-12-21 21:17:18] -rw-r--r-- 1 boinc boinc       100 Dec 21 19:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-21 21:17:18] -rwxr-xr-x 1 boinc boinc      7986 Dec 21 19:12 run_atlas
[2025-12-21 21:17:18] -rw-r--r-- 1 boinc boinc       105 Dec 21 19:12 job.xml
[2025-12-21 21:17:18] -rw-r--r-- 2 boinc boinc 251185383 Dec 21 19:12 EVNT.47929390._000140.pool.root.1
[2025-12-21 21:17:18] -rw-r--r-- 2 boinc boinc    592395 Dec 21 19:12 input.tar.gz
[2025-12-21 21:17:18] -rw-r--r-- 2 boinc boinc     15847 Dec 21 19:12 start_atlas.sh
[2025-12-21 21:17:18] drwxrwx--x 2 boinc boinc      4096 Dec 21 19:12 shared
[2025-12-21 21:17:18] -rw-r--r-- 1 boinc boinc         0 Dec 21 19:12 boinc_setup_complete
[2025-12-21 21:17:18] -rw-r--r-- 1 boinc boinc      6209 Dec 21 19:12 init_data.xml
[2025-12-21 21:17:18] -rw-r--r-- 1 boinc boinc         0 Dec 21 19:12 boinc_lockfile
[2025-12-21 21:17:18] -rw-r--r-- 1 boinc boinc      2551 Dec 21 19:12 pandaJob.out
[2025-12-21 21:17:18] -rw------- 1 boinc boinc    988204 Dec 21 19:13 agis_schedconf.cvmfs.json
[2025-12-21 21:17:18] -rw------- 1 boinc boinc   1516240 Dec 21 19:13 agis_ddmendpoints.agis.ALL.json
[2025-12-21 21:17:18] drwx------ 5 boinc boinc      4096 Dec 21 19:13 pilot3
[2025-12-21 21:17:18] -rw------- 1 boinc boinc 183869704 Dec 21 21:15 HITS.47929392._003293.pool.root.1
[2025-12-21 21:17:18] -rw-r--r-- 1 boinc boinc       529 Dec 21 21:15 boinc_task_state.xml
[2025-12-21 21:17:18] -rw------- 1 boinc boinc      1013 Dec 21 21:16 memory_monitor_summary.json
[2025-12-21 21:17:18] -rw------- 1 boinc boinc    281649 Dec 21 21:16 log.47929392._003293.job.log.tgz.1
[2025-12-21 21:17:18] -rw------- 1 boinc boinc      7755 Dec 21 21:16 heartbeat.json
[2025-12-21 21:17:18] -rw------- 1 boinc boinc        95 Dec 21 21:16 pilot_heartbeat.json
[2025-12-21 21:17:18] -rw-r--r-- 1 boinc boinc      8192 Dec 21 21:17 boinc_mmap_file
[2025-12-21 21:17:18] -rw-r--r-- 1 boinc boinc        27 Dec 21 21:17 wrapper_checkpoint.txt
[2025-12-21 21:17:18] -rw------- 1 boinc boinc      4752 Dec 21 21:17 pilotlog.txt
[2025-12-21 21:17:18] -rw------- 1 boinc boinc   1066257 Dec 21 21:17 log.47929392._003293.job.log.1
[2025-12-21 21:17:18] -rw------- 1 boinc boinc       357 Dec 21 21:17 output.list
[2025-12-21 21:17:18] -rw-r--r-- 1 boinc boinc       620 Dec 21 21:17 runtime_log
[2025-12-21 21:17:18] -rw------- 1 boinc boinc   1372160 Dec 21 21:17 result.tar.gz
[2025-12-21 21:17:18] -rw------- 1 boinc boinc       663 Dec 21 21:17 uNBLDmIovq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7igKDmahHJEo.diag
[2025-12-21 21:17:18] -rw-r--r-- 1 boinc boinc      8917 Dec 21 21:17 runtime_log.err
[2025-12-21 21:17:18] -rw-r--r-- 1 boinc boinc     21441 Dec 21 21:17 stderr.txt
[2025-12-21 21:17:18] HITS file was successfully produced:
[2025-12-21 21:17:18] -rw------- 1 boinc boinc 183869704 Dec 21 21:15 shared/HITS.pool.root.1
[2025-12-21 21:17:18]  *** Contents of shared directory: ***
[2025-12-21 21:17:18] total 426808
[2025-12-21 21:17:18] -rw-r--r-- 2 boinc boinc 251185383 Dec 21 19:12 ATLAS.root_0
[2025-12-21 21:17:18] -rw-r--r-- 2 boinc boinc    592395 Dec 21 19:12 input.tar.gz
[2025-12-21 21:17:18] -rw-r--r-- 2 boinc boinc     15847 Dec 21 19:12 start_atlas.sh
[2025-12-21 21:17:18] -rw------- 1 boinc boinc 183869704 Dec 21 21:15 HITS.pool.root.1
[2025-12-21 21:17:18] -rw------- 1 boinc boinc   1372160 Dec 21 21:17 result.tar.gz
21:17:19 (1093643): run_atlas exited; CPU time 14354.630727
21:17:19 (1093643): called boinc_finish(0)

</stderr_txt>
]]>

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