Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:40:12 (4847): wrapper (7.7.26015): starting
03:40:12 (4847): wrapper: running run_atlas (--nthreads 8)
[2025-12-22 03:40:12] Arguments: --nthreads 8
[2025-12-22 03:40:12] Threads: 8
[2025-12-22 03:40:12] Checking for CVMFS
[2025-12-22 03:40:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-22 03:40:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-22 03:40:14] Running cvmfs_config stat atlas.cern.ch
[2025-12-22 03:40:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-22 03:40:15] 2.11.2.0 3780 8906 88684 154281 3 90 21468015 25165825 2826 130560 0 5344245 99.765 3185708 2318 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-22 03:40:15] CVMFS is ok
[2025-12-22 03:40:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-22 03:40:15] Checking for apptainer binary...
[2025-12-22 03:40:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-22 03:40:15] Running /usr/bin/apptainer --version
[2025-12-22 03:40:15] apptainer version 1.3.2-1.el7
[2025-12-22 03:40:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-22 03:40:24] cg-vwn360.simple-grid.lan
[2025-12-22 03:40:24] apptainer works
[2025-12-22 03:40:24] Set ATHENA_PROC_NUMBER=8
[2025-12-22 03:40:24] Set ATHENA_CORE_NUMBER=8
[2025-12-22 03:40:24] Starting ATLAS job with PandaID=6935892094
[2025-12-22 03:40:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-22 07:52:52]  *** The last 200 lines of the pilot log: ***
[2025-12-22 07:52:52] 2025-12-22 06:51:49,167 | INFO     | time since job start (14847s) is within the limit (174528.0s)
[2025-12-22 07:52:52] 2025-12-22 06:51:49,374 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-22 07:52:52] 2025-12-22 06:51:49,375 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-22 07:52:52] 2025-12-22 06:51:49,377 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6935892094/memory_monitor_summary.json (trf name=prmon)
[2025-12-22 07:52:52] 2025-12-22 06:51:49,378 | INFO     | extracted standard info from prmon json
[2025-12-22 07:52:52] 2025-12-22 06:51:49,378 | INFO     | extracted standard memory fields from prmon json
[2025-12-22 07:52:52] 2025-12-22 06:51:49,378 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-22 07:52:52] 2025-12-22 06:51:49,378 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-22 07:52:52] 2025-12-22 06:51:49,378 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-22 07:52:52] 2025-12-22 06:51:49,384 | INFO     | fitting pss+swap vs Time
[2025-12-22 07:52:52] 2025-12-22 06:51:49,384 | INFO     | sum of square deviations: 4024149870.0
[2025-12-22 07:52:52] 2025-12-22 06:51:49,386 | INFO     | sum of deviations: 88169589588.0
[2025-12-22 07:52:52] 2025-12-22 06:51:49,386 | INFO     | mean x: 1766379061.0
[2025-12-22 07:52:52] 2025-12-22 06:51:49,387 | INFO     | mean y: 2445276.995744681
[2025-12-22 07:52:52] 2025-12-22 06:51:49,387 | INFO     | intersect: -38699124469.76093
[2025-12-22 07:52:52] 2025-12-22 06:51:49,387 | INFO     | chi2: 5.464856532721803
[2025-12-22 07:52:52] 2025-12-22 06:51:49,388 | INFO     | sum of square deviations: 3772712597.5
[2025-12-22 07:52:52] 2025-12-22 06:51:49,390 | INFO     | sum of deviations: 101204814733.5
[2025-12-22 07:52:52] 2025-12-22 06:51:49,390 | INFO     | mean x: 1766378908.5
[2025-12-22 07:52:52] 2025-12-22 06:51:49,390 | INFO     | mean y: 2453019.743478261
[2025-12-22 07:52:52] 2025-12-22 06:51:49,390 | INFO     | intersect: -47381503633.18692
[2025-12-22 07:52:52] 2025-12-22 06:51:49,390 | INFO     | chi2: 4.728855925545572
[2025-12-22 07:52:52] 2025-12-22 06:51:49,391 | INFO     | current chi2=4.728855925545572 (change=13.467885254979631 %)
[2025-12-22 07:52:52] 2025-12-22 06:51:49,391 | INFO     | right removable region: 229
[2025-12-22 07:52:52] 2025-12-22 06:51:49,391 | INFO     | sum of square deviations: 3772712597.5
[2025-12-22 07:52:52] 2025-12-22 06:51:49,393 | INFO     | sum of deviations: 12974272451.0
[2025-12-22 07:52:52] 2025-12-22 06:51:49,393 | INFO     | mean x: 1766379213.5
[2025-12-22 07:52:52] 2025-12-22 06:51:49,393 | INFO     | mean y: 2490835.9913043478
[2025-12-22 07:52:52] 2025-12-22 06:51:49,394 | INFO     | intersect: -6072046933.707464
[2025-12-22 07:52:52] 2025-12-22 06:51:49,394 | INFO     | chi2: 1.4913863184191656
[2025-12-22 07:52:52] 2025-12-22 06:51:49,394 | INFO     | current chi2=1.4913863184191656 (change=72.70950647122713 %)
[2025-12-22 07:52:52] 2025-12-22 06:51:49,395 | INFO     | sum of square deviations: 3531973200.0
[2025-12-22 07:52:52] 2025-12-22 06:51:49,397 | INFO     | sum of deviations: -12226791504.999998
[2025-12-22 07:52:52] 2025-12-22 06:51:49,397 | INFO     | mean x: 1766379366.0
[2025-12-22 07:52:52] 2025-12-22 06:51:49,397 | INFO     | mean y: 2506654.92
[2025-12-22 07:52:52] 2025-12-22 06:51:49,397 | INFO     | intersect: 6117262063.261174
[2025-12-22 07:52:52] 2025-12-22 06:51:49,397 | INFO     | chi2: 0.8345451075957796
[2025-12-22 07:52:52] 2025-12-22 06:51:49,398 | INFO     | current chi2=0.8345451075957796 (change=44.04232509787418 %)
[2025-12-22 07:52:52] 2025-12-22 06:51:49,398 | INFO     | sum of square deviations: 3301699115.0
[2025-12-22 07:52:52] 2025-12-22 06:51:49,400 | INFO     | sum of deviations: -7032707812.000001
[2025-12-22 07:52:52] 2025-12-22 06:51:49,400 | INFO     | mean x: 1766379518.5
[2025-12-22 07:52:52] 2025-12-22 06:51:49,400 | INFO     | mean y: 2503187.6454545455
[2025-12-22 07:52:52] 2025-12-22 06:51:49,400 | INFO     | intersect: 3764939014.1794996
[2025-12-22 07:52:52] 2025-12-22 06:51:49,401 | INFO     | chi2: 0.8054337518253027
[2025-12-22 07:52:52] 2025-12-22 06:51:49,401 | INFO     | current chi2=0.8054337518253027 (change=3.4882902680171526 %)
[2025-12-22 07:52:52] 2025-12-22 06:51:49,401 | INFO     | left removable region: 30
[2025-12-22 07:52:52] 2025-12-22 06:51:49,401 | INFO     | sum of square deviations: 2443580700.0
[2025-12-22 07:52:52] 2025-12-22 06:51:49,403 | INFO     | sum of deviations: 5034428698.000001
[2025-12-22 07:52:52] 2025-12-22 06:51:49,403 | INFO     | mean x: 1766379793.0
[2025-12-22 07:52:52] 2025-12-22 06:51:49,403 | INFO     | mean y: 2514319.4773869347
[2025-12-22 07:52:52] 2025-12-22 06:51:49,403 | INFO     | intersect: -3636699691.9307494
[2025-12-22 07:52:52] 2025-12-22 06:51:49,404 | INFO     | chi2: 0.0005550414418044251
[2025-12-22 07:52:52] 2025-12-22 06:51:49,404 | INFO     | current memory leak: 2.06 B/s (using 199 data points, chi2=0.00)
[2025-12-22 07:52:52] 2025-12-22 06:51:49,405 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-12-22 07:52:52] 2025-12-22 06:51:49,405 | INFO     | ..............................
[2025-12-22 07:52:52] 2025-12-22 06:51:49,405 | INFO     | . Timing measurements:
[2025-12-22 07:52:52] 2025-12-22 06:51:49,405 | INFO     | . get job = 0 s
[2025-12-22 07:52:52] 2025-12-22 06:51:49,405 | INFO     | . initial setup = 6 s
[2025-12-22 07:52:52] 2025-12-22 06:51:49,405 | INFO     | . payload setup = 130 s
[2025-12-22 07:52:52] 2025-12-22 06:51:49,405 | INFO     | . stage-in = 0 s
[2025-12-22 07:52:52] 2025-12-22 06:51:49,406 | INFO     | . payload execution = 14426 s
[2025-12-22 07:52:52] 2025-12-22 06:51:49,406 | INFO     | . stage-out = 3 s
[2025-12-22 07:52:52] 2025-12-22 06:51:49,406 | INFO     | . log creation = 0 s
[2025-12-22 07:52:52] 2025-12-22 06:51:49,406 | INFO     | ..............................
[2025-12-22 07:52:52] 2025-12-22 06:51:49,531 | INFO     | 
[2025-12-22 07:52:52] 2025-12-22 06:51:49,531 | INFO     | job summary report
[2025-12-22 07:52:52] 2025-12-22 06:51:49,531 | INFO     | --------------------------------------------------
[2025-12-22 07:52:52] 2025-12-22 06:51:49,531 | INFO     | PanDA job id: 6935892094
[2025-12-22 07:52:52] 2025-12-22 06:51:49,531 | INFO     | task id: 47929392
[2025-12-22 07:52:52] 2025-12-22 06:51:49,531 | INFO     | errors: (none)
[2025-12-22 07:52:52] 2025-12-22 06:51:49,532 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-22 07:52:52] 2025-12-22 06:51:49,532 | INFO     | pilot state: finished 
[2025-12-22 07:52:52] 2025-12-22 06:51:49,532 | INFO     | transexitcode: 0
[2025-12-22 07:52:52] 2025-12-22 06:51:49,532 | INFO     | exeerrorcode: 0
[2025-12-22 07:52:52] 2025-12-22 06:51:49,532 | INFO     | exeerrordiag: 
[2025-12-22 07:52:52] 2025-12-22 06:51:49,532 | INFO     | exitcode: 0
[2025-12-22 07:52:52] 2025-12-22 06:51:49,532 | INFO     | exitmsg: OK
[2025-12-22 07:52:52] 2025-12-22 06:51:49,532 | INFO     | cpuconsumptiontime: 54933 s
[2025-12-22 07:52:52] 2025-12-22 06:51:49,532 | INFO     | nevents: 400
[2025-12-22 07:52:52] 2025-12-22 06:51:49,532 | INFO     | neventsw: 0
[2025-12-22 07:52:52] 2025-12-22 06:51:49,533 | INFO     | pid: 15184
[2025-12-22 07:52:52] 2025-12-22 06:51:49,533 | INFO     | pgrp: 15184
[2025-12-22 07:52:52] 2025-12-22 06:51:49,533 | INFO     | corecount: 8
[2025-12-22 07:52:52] 2025-12-22 06:51:49,533 | INFO     | event service: False
[2025-12-22 07:52:52] 2025-12-22 06:51:49,533 | INFO     | sizes: {0: 2283188, 1: 2283873, 2: 2284072, 13: 2284072, 23: 2284128, 34: 2284156, 45: 2284312, 56: 2284340, 66: 2284368, 77: 2284396, 88: 2284452, 94: 2285022, 98
[2025-12-22 07:52:52] 2025-12-22 06:51:49,533 | INFO     | --------------------------------------------------
[2025-12-22 07:52:52] 2025-12-22 06:51:49,533 | INFO     | 
[2025-12-22 07:52:52] 2025-12-22 06:51:49,533 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-12-22 07:52:52] 2025-12-22 06:51:49,988 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-22 07:52:52] 2025-12-22 06:51:49,988 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-22 07:52:52] 2025-12-22 06:51:49,988 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-22 07:52:52] 2025-12-22 06:51:49,988 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-22 07:52:52] 2025-12-22 06:51:49,989 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-22 07:52:52] 2025-12-22 06:51:49,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-22 07:52:52] 2025-12-22 06:51:49,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-22 07:52:52] 2025-12-22 06:51:49,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-22 07:52:52] 2025-12-22 06:51:49,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-22 07:52:52] 2025-12-22 06:51:49,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-22 07:52:52] 2025-12-22 06:51:49,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-22 07:52:52] 2025-12-22 06:51:49,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-22 07:52:52] 2025-12-22 06:51:49,989 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-22 07:52:52] 2025-12-22 06:51:49,990 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-22 07:52:52] 2025-12-22 06:51:49,990 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-22 07:52:52] 2025-12-22 06:51:49,990 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-22 07:52:52] 2025-12-22 06:51:49,990 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-22 07:52:52] 2025-12-22 06:51:49,990 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-22 07:52:52] 2025-12-22 06:51:49,990 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-22 07:52:52] 2025-12-22 06:51:49,990 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-22 07:52:52] 2025-12-22 06:51:49,990 | INFO     | job 6935892094 has completed (purged errors)
[2025-12-22 07:52:52] 2025-12-22 06:51:49,991 | INFO     | overall cleanup function is called
[2025-12-22 07:52:52] 2025-12-22 06:51:51,003 | INFO     | --- collectZombieJob: --- 10, [15184]
[2025-12-22 07:52:52] 2025-12-22 06:51:51,004 | INFO     | zombie collector waiting for pid 15184
[2025-12-22 07:52:52] 2025-12-22 06:51:51,004 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-22 07:52:52] 2025-12-22 06:51:51,004 | INFO     | collected zombie processes
[2025-12-22 07:52:52] 2025-12-22 06:51:51,004 | INFO     | will attempt to kill all subprocesses of pid=15184
[2025-12-22 07:52:52] 2025-12-22 06:51:51,139 | INFO     | process IDs to be killed: [15184] (in reverse order)
[2025-12-22 07:52:52] 2025-12-22 06:51:51,936 | WARNING  | found no corresponding commands to process id(s)
[2025-12-22 07:52:52] 2025-12-22 06:51:51,936 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-22 07:52:52] 2025-12-22 06:51:51,939 | INFO     | did not find any defunct processes belonging to 15184
[2025-12-22 07:52:52] 2025-12-22 06:51:51,942 | INFO     | did not find any defunct processes belonging to 15184
[2025-12-22 07:52:52] 2025-12-22 06:51:51,942 | INFO     | ready for new job
[2025-12-22 07:52:52] 2025-12-22 06:51:51,943 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-22 07:52:52] 2025-12-22 06:51:51,944 | INFO     | ***************************************
[2025-12-22 07:52:52] 2025-12-22 06:51:51,945 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-22 07:52:52] 2025-12-22 06:51:51,945 | INFO     | ***************************************
[2025-12-22 07:52:52] 2025-12-22 06:51:51,945 | INFO     | 
[2025-12-22 07:52:52] 2025-12-22 06:51:51,946 | INFO     | pilot is running in a VM
[2025-12-22 07:52:52] 2025-12-22 06:51:51,946 | INFO     | architecture information:
[2025-12-22 07:52:52] 2025-12-22 06:51:51,946 | INFO     | executing command: cat /etc/os-release
[2025-12-22 07:52:52] 2025-12-22 06:51:52,158 | INFO     | cat /etc/os-release:
[2025-12-22 07:52:52] NAME="CentOS Linux"
[2025-12-22 07:52:52] VERSION="7 (Core)"
[2025-12-22 07:52:52] ID="centos"
[2025-12-22 07:52:52] ID_LIKE="rhel fedora"
[2025-12-22 07:52:52] VERSION_ID="7"
[2025-12-22 07:52:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-22 07:52:52] ANSI_COLOR="0;31"
[2025-12-22 07:52:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-22 07:52:52] HOME_URL="https://www.centos.org/"
[2025-12-22 07:52:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-22 07:52:52] 
[2025-12-22 07:52:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-22 07:52:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-22 07:52:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-22 07:52:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-22 07:52:52] 
[2025-12-22 07:52:52] 2025-12-22 06:51:52,159 | INFO     | ***************************************
[2025-12-22 07:52:52] 2025-12-22 06:51:52,662 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-12-22 07:52:52] 2025-12-22 06:51:52,684 | INFO     | sufficient remaining disk space (497124638720 B)
[2025-12-22 07:52:52] 2025-12-22 06:51:52,685 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-22 07:52:52] 2025-12-22 06:51:52,685 | INFO     | current server update state: UPDATING_FINAL
[2025-12-22 07:52:52] 2025-12-22 06:51:52,685 | INFO     | update_server=False
[2025-12-22 07:52:52] 2025-12-22 06:51:52,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-22 07:52:52] 2025-12-22 06:51:52,685 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-22 07:52:52] 2025-12-22 06:51:52,686 | INFO     | aborting loop
[2025-12-22 07:52:52] 2025-12-22 06:51:52,686 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-22 07:52:52] 2025-12-22 06:51:53,231 | INFO     | all job control threads have been joined
[2025-12-22 07:52:52] 2025-12-22 06:51:53,372 | INFO     | all data control threads have been joined
[2025-12-22 07:52:52] 2025-12-22 06:51:53,692 | INFO     | [job] job monitor thread has finished
[2025-12-22 07:52:52] 2025-12-22 06:51:53,692 | INFO     | [job] retrieve thread has finished
[2025-12-22 07:52:52] 2025-12-22 06:51:53,719 | INFO     | all payload control threads have been joined
[2025-12-22 07:52:52] 2025-12-22 06:51:53,726 | INFO     | [payload] execute_payloads thread has finished
[2025-12-22 07:52:52] 2025-12-22 06:51:53,740 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-22 07:52:52] 2025-12-22 06:51:54,174 | INFO     | [payload] failed_post thread has finished
[2025-12-22 07:52:52] 2025-12-22 06:51:54,238 | INFO     | [job] control thread has finished
[2025-12-22 07:52:52] 2025-12-22 06:51:54,378 | INFO     | [data] control thread has finished
[2025-12-22 07:52:52] 2025-12-22 06:51:54,387 | INFO     | [data] copytool_in thread has finished
[2025-12-22 07:52:52] 2025-12-22 06:51:54,530 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-22 07:52:52] 2025-12-22 06:51:54,545 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-22 07:52:52] 2025-12-22 06:51:54,691 | INFO     | [data] copytool_out thread has finished
[2025-12-22 07:52:52] 2025-12-22 06:51:54,725 | INFO     | [payload] control thread has finished
[2025-12-22 07:52:52] 2025-12-22 06:51:54,777 | INFO     | [job] validate thread has finished
[2025-12-22 07:52:52] 2025-12-22 06:51:54,809 | INFO     | [payload] validate_pre thread has finished
[2025-12-22 07:52:52] 2025-12-22 06:51:54,899 | INFO     | [payload] validate_post thread has finished
[2025-12-22 07:52:52] 2025-12-22 06:51:55,017 | INFO     | [job] create_data_payload thread has finished
[2025-12-22 07:52:52] 2025-12-22 06:51:55,551 | INFO     | [job] queue monitor thread has finished
[2025-12-22 07:52:52] 2025-12-22 06:51:57,749 | INFO     | [data] queue_monitor thread has finished
[2025-12-22 07:52:52] 2025-12-22 06:52:22,432 | INFO     | PID=8637 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-22 07:52:52] 2025-12-22 06:52:22,432 | INFO     | .. there are 9 such processes running
[2025-12-22 07:52:52] 2025-12-22 06:52:22,433 | INFO     | found 0 job(s) in 20 queues
[2025-12-22 07:52:52] 2025-12-22 06:52:22,433 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-22 07:52:52] 2025-12-22 06:52:22,434 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-22 07:52:52] 2025-12-22 06:52:47,196 | INFO     | [monitor] cgroup control has ended
[2025-12-22 07:52:52] 2025-12-22 06:52:47,200 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140394895652672)>', '<ExcThread(monitor, started 140394134226688)>']
[2025-12-22 07:52:52] 2025-12-22 06:52:47,572 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-22 07:52:52] 2025-12-22 06:52:47,573 | INFO     | [monitor] control thread has ended
[2025-12-22 07:52:52] 2025-12-22 06:52:52,225 | INFO     | all workflow threads have been joined
[2025-12-22 07:52:52] 2025-12-22 06:52:52,226 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-22 07:52:52] 2025-12-22 06:52:52,226 | INFO     | traces error code: 0
[2025-12-22 07:52:52] 2025-12-22 06:52:52,226 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-22 07:52:52] 2025-12-22 06:52:52,361 [wrapper] ==== pilot stdout END ====
[2025-12-22 07:52:52] 2025-12-22 06:52:52,371 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-22 07:52:52] 2025-12-22 06:52:52,378 [wrapper] pilotpid: 8637
[2025-12-22 07:52:52] 2025-12-22 06:52:52,383 [wrapper] Pilot exit status: 0
[2025-12-22 07:52:52] 2025-12-22 06:52:52,407 [wrapper] pandaids: 6935892094
[2025-12-22 07:52:52] 2025-12-22 06:52:52,449 [wrapper] cleanup supervisor_pilot  9546 8638
[2025-12-22 07:52:52] 2025-12-22 06:52:52,454 [wrapper] Test setup, not cleaning
[2025-12-22 07:52:52] 2025-12-22 06:52:52,462 [wrapper] apfmon messages muted
[2025-12-22 07:52:52] 2025-12-22 06:52:52,465 [wrapper] ==== wrapper stdout END ====
[2025-12-22 07:52:52] 2025-12-22 06:52:52,468 [wrapper] ==== wrapper stderr END ====
[2025-12-22 07:52:52]  *** Error codes and diagnostics ***
[2025-12-22 07:52:52]     "exeErrorCode": 0,
[2025-12-22 07:52:52]     "exeErrorDiag": "",
[2025-12-22 07:52:52]     "pilotErrorCode": 0,
[2025-12-22 07:52:52]     "pilotErrorDiag": "",
[2025-12-22 07:52:52]  *** Listing of results directory ***
[2025-12-22 07:52:52] total 435856
[2025-12-22 07:52:52] -rw-r--r--. 1 boinc boinc    579449 Dec 19 17:45 pilot3.tar.gz
[2025-12-22 07:52:52] -rwx------. 1 boinc boinc     36322 Dec 19 17:46 runpilot2-wrapper.sh
[2025-12-22 07:52:52] -rw-r--r--. 1 boinc boinc      5112 Dec 19 17:51 queuedata.json
[2025-12-22 07:52:52] -rw-r--r--. 1 boinc boinc       100 Dec 22 03:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-22 07:52:52] -rwxr-xr-x. 1 boinc boinc      7986 Dec 22 03:40 run_atlas
[2025-12-22 07:52:52] -rw-r--r--. 1 boinc boinc       105 Dec 22 03:40 job.xml
[2025-12-22 07:52:52] -rw-r--r--. 1 boinc boinc      6390 Dec 22 03:40 init_data.xml
[2025-12-22 07:52:52] -rw-r--r--. 2 boinc boinc 253923998 Dec 22 03:40 EVNT.47929390._000071.pool.root.1
[2025-12-22 07:52:52] -rw-r--r--. 2 boinc boinc     15847 Dec 22 03:40 start_atlas.sh
[2025-12-22 07:52:52] drwxrwx--x. 2 boinc boinc        68 Dec 22 03:40 shared
[2025-12-22 07:52:52] -rw-r--r--. 2 boinc boinc    592396 Dec 22 03:40 input.tar.gz
[2025-12-22 07:52:52] -rw-r--r--. 1 boinc boinc         0 Dec 22 03:40 boinc_lockfile
[2025-12-22 07:52:52] -rw-r--r--. 1 boinc boinc      2549 Dec 22 03:40 pandaJob.out
[2025-12-22 07:52:52] -rw-------. 1 boinc boinc    988238 Dec 22 03:44 agis_schedconf.cvmfs.json
[2025-12-22 07:52:52] drwx------. 5 boinc boinc      4096 Dec 22 03:44 pilot3
[2025-12-22 07:52:52] -rw-------. 1 boinc boinc 183597626 Dec 22 07:48 HITS.47929392._001963.pool.root.1
[2025-12-22 07:52:52] -rw-r--r--. 1 boinc boinc       530 Dec 22 07:48 boinc_task_state.xml
[2025-12-22 07:52:52] -rw-------. 1 boinc boinc      1015 Dec 22 07:49 memory_monitor_summary.json
[2025-12-22 07:52:52] -rw-------. 1 boinc boinc   1516240 Dec 22 07:50 agis_ddmendpoints.agis.ALL.json
[2025-12-22 07:52:52] -rw-------. 1 boinc boinc    459974 Dec 22 07:50 log.47929392._001963.job.log.tgz.1
[2025-12-22 07:52:52] -rw-------. 1 boinc boinc      7773 Dec 22 07:51 heartbeat.json
[2025-12-22 07:52:52] -rw-------. 1 boinc boinc        95 Dec 22 07:52 pilot_heartbeat.json
[2025-12-22 07:52:52] -rw-r--r--. 1 boinc boinc      8192 Dec 22 07:52 boinc_mmap_file
[2025-12-22 07:52:52] -rw-r--r--. 1 boinc boinc        28 Dec 22 07:52 wrapper_checkpoint.txt
[2025-12-22 07:52:52] -rw-------. 1 boinc boinc      4883 Dec 22 07:52 pilotlog.txt
[2025-12-22 07:52:52] -rw-------. 1 boinc boinc   1986144 Dec 22 07:52 log.47929392._001963.job.log.1
[2025-12-22 07:52:52] -rw-------. 1 boinc boinc       357 Dec 22 07:52 output.list
[2025-12-22 07:52:52] -rw-r--r--. 1 boinc boinc       620 Dec 22 07:52 runtime_log
[2025-12-22 07:52:52] -rw-------. 1 boinc boinc   2467840 Dec 22 07:52 result.tar.gz
[2025-12-22 07:52:52] -rw-r--r--. 1 boinc boinc      8817 Dec 22 07:52 runtime_log.err
[2025-12-22 07:52:52] -rw-------. 1 boinc boinc       657 Dec 22 07:52 elbNDmAosq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYdgKDmFuVsRm.diag
[2025-12-22 07:52:52] -rw-r--r--. 1 boinc boinc     20757 Dec 22 07:52 stderr.txt
[2025-12-22 07:52:52] HITS file was successfully produced:
[2025-12-22 07:52:52] -rw-------. 1 boinc boinc 183597626 Dec 22 07:48 shared/HITS.pool.root.1
[2025-12-22 07:52:52]  *** Contents of shared directory: ***
[2025-12-22 07:52:52] total 430280
[2025-12-22 07:52:52] -rw-r--r--. 2 boinc boinc 253923998 Dec 22 03:40 ATLAS.root_0
[2025-12-22 07:52:52] -rw-r--r--. 2 boinc boinc     15847 Dec 22 03:40 start_atlas.sh
[2025-12-22 07:52:52] -rw-r--r--. 2 boinc boinc    592396 Dec 22 03:40 input.tar.gz
[2025-12-22 07:52:52] -rw-------. 1 boinc boinc 183597626 Dec 22 07:48 HITS.pool.root.1
[2025-12-22 07:52:52] -rw-------. 1 boinc boinc   2467840 Dec 22 07:52 result.tar.gz
07:52:54 (4847): run_atlas exited; CPU time 55136.385175
07:52:54 (4847): called boinc_finish(0)

</stderr_txt>
]]>

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