Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
17:27:51 (606763): wrapper (7.7.26015): starting
17:27:51 (606763): wrapper: running run_atlas (--nthreads 12)
[2025-12-25 17:27:51] Arguments: --nthreads 12
[2025-12-25 17:27:51] Threads: 12
[2025-12-25 17:27:51] Checking for CVMFS
[2025-12-25 17:27:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-25 17:27:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-25 17:27:51] Running cvmfs_config stat atlas.cern.ch
[2025-12-25 17:27:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-25 17:27:52] 2.13.3.0 3561 178 63976 154424 1 97 3114361 4096001 11554 130560 0 26227501 100.000 8192 342 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-25 17:27:52] CVMFS is ok
[2025-12-25 17:27:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-25 17:27:52] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-25 17:27:52] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-25 17:27:52] Further information can be found at the LHC@home message board.
[2025-12-25 17:27:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-25 17:27:52] Checking for apptainer binary...
[2025-12-25 17:27:52] apptainer is not installed, using version from CVMFS
[2025-12-25 17:27:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-25 17:27:52] 7950x-linux
[2025-12-25 17:27:52] apptainer works
[2025-12-25 17:27:52] Set ATHENA_PROC_NUMBER=12
[2025-12-25 17:27:52] Set ATHENA_CORE_NUMBER=12
[2025-12-25 17:27:52] Starting ATLAS job with PandaID=6935198778
[2025-12-25 17:27:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc149/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-25 20:30:29]  *** The last 200 lines of the pilot log: ***
[2025-12-25 20:30:29] 2025-12-26 04:29:18,598 | INFO     | monitor loop #796: job 0:6935198778 is in state 'finished'
[2025-12-25 20:30:29] 2025-12-26 04:29:18,598 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-25 20:30:29] 2025-12-26 04:29:20,575 | INFO     | time since job start (10875s) is within the limit (174528.0s)
[2025-12-25 20:30:29] 2025-12-26 04:29:20,575 | INFO     | 10878s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-25 20:30:29] 2025-12-26 04:29:21,101 | INFO     | monitor loop #797: job 0:6935198778 is in state 'finished'
[2025-12-25 20:30:29] 2025-12-26 04:29:21,102 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-25 20:30:29] 2025-12-26 04:29:22,580 | INFO     | time since job start (10877s) is within the limit (174528.0s)
[2025-12-25 20:30:29] 2025-12-26 04:29:23,408 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-25 20:30:29] 2025-12-26 04:29:23,411 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4000.04746875
[2025-12-25 20:30:29] 2025-12-26 04:29:23,414 | INFO     | using path: /var/lib/multiboinc/boinc149/slots/3/PanDA_Pilot-6935198778/memory_monitor_summary.json (trf name=prmon)
[2025-12-25 20:30:29] 2025-12-26 04:29:23,414 | INFO     | extracted standard info from prmon json
[2025-12-25 20:30:29] 2025-12-26 04:29:23,414 | INFO     | extracted standard memory fields from prmon json
[2025-12-25 20:30:29] 2025-12-26 04:29:23,414 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-25 20:30:29] 2025-12-26 04:29:23,415 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-25 20:30:29] 2025-12-26 04:29:23,415 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-25 20:30:29] 2025-12-26 04:29:23,416 | INFO     | fitting pss+swap vs Time
[2025-12-25 20:30:29] 2025-12-26 04:29:23,417 | INFO     | sum of square deviations: 1748737904.5
[2025-12-25 20:30:29] 2025-12-26 04:29:23,417 | INFO     | sum of deviations: 22174753397.500004
[2025-12-25 20:30:29] 2025-12-26 04:29:23,417 | INFO     | mean x: 1766717911.5
[2025-12-25 20:30:29] 2025-12-26 04:29:23,417 | INFO     | mean y: 2671266.646067416
[2025-12-25 20:30:29] 2025-12-26 04:29:23,417 | INFO     | intersect: -22400076400.483677
[2025-12-25 20:30:29] 2025-12-26 04:29:23,417 | INFO     | chi2: 1.3886467371718076
[2025-12-25 20:30:29] 2025-12-26 04:29:23,418 | INFO     | sum of square deviations: 1605470102.0
[2025-12-25 20:30:29] 2025-12-26 04:29:23,418 | INFO     | sum of deviations: 21384791960.0
[2025-12-25 20:30:29] 2025-12-26 04:29:23,418 | INFO     | mean x: 1766717759.0
[2025-12-25 20:30:29] 2025-12-26 04:29:23,418 | INFO     | mean y: 2670425.485549133
[2025-12-25 20:30:29] 2025-12-26 04:29:23,418 | INFO     | intersect: -23529933315.42947
[2025-12-25 20:30:29] 2025-12-26 04:29:23,418 | INFO     | chi2: 1.3897764479865589
[2025-12-25 20:30:29] 2025-12-26 04:29:23,418 | INFO     | current chi2=1.3897764479865589 (change=-0.08135336255872005 %)
[2025-12-25 20:30:29] 2025-12-26 04:29:23,418 | INFO     | right removable region: 172
[2025-12-25 20:30:29] 2025-12-26 04:29:23,418 | INFO     | sum of square deviations: 1605470102.0
[2025-12-25 20:30:29] 2025-12-26 04:29:23,419 | INFO     | sum of deviations: -4549541039.999999
[2025-12-25 20:30:29] 2025-12-26 04:29:23,419 | INFO     | mean x: 1766718064.0
[2025-12-25 20:30:29] 2025-12-26 04:29:23,419 | INFO     | mean y: 2699297.5953757227
[2025-12-25 20:30:29] 2025-12-26 04:29:23,419 | INFO     | intersect: 5009180781.283165
[2025-12-25 20:30:29] 2025-12-26 04:29:23,419 | INFO     | chi2: 0.006412054545795223
[2025-12-25 20:30:29] 2025-12-26 04:29:23,419 | INFO     | current chi2=0.006412054545795223 (change=99.53825156721612 %)
[2025-12-25 20:30:29] 2025-12-26 04:29:23,419 | INFO     | sum of square deviations: 1470248962.0
[2025-12-25 20:30:29] 2025-12-26 04:29:23,420 | INFO     | sum of deviations: -3279483860.5000005
[2025-12-25 20:30:29] 2025-12-26 04:29:23,420 | INFO     | mean x: 1766718216.5
[2025-12-25 20:30:29] 2025-12-26 04:29:23,420 | INFO     | mean y: 2697867.3273809524
[2025-12-25 20:30:29] 2025-12-26 04:29:23,420 | INFO     | intersect: 3943475264.0898595
[2025-12-25 20:30:29] 2025-12-26 04:29:23,420 | INFO     | chi2: 0.005463728827477191
[2025-12-25 20:30:29] 2025-12-26 04:29:23,420 | INFO     | current chi2=0.005463728827477191 (change=14.789732550542741 %)
[2025-12-25 20:30:29] 2025-12-26 04:29:23,420 | INFO     | left removable region: 20
[2025-12-25 20:30:29] 2025-12-26 04:29:23,420 | INFO     | sum of square deviations: 1088905998.0
[2025-12-25 20:30:29] 2025-12-26 04:29:23,421 | INFO     | sum of deviations: -1758234841.9999993
[2025-12-25 20:30:29] 2025-12-26 04:29:23,421 | INFO     | mean x: 1766718338.5
[2025-12-25 20:30:29] 2025-12-26 04:29:23,421 | INFO     | mean y: 2695659.2236842103
[2025-12-25 20:30:29] 2025-12-26 04:29:23,421 | INFO     | intersect: 2855380596.6346445
[2025-12-25 20:30:29] 2025-12-26 04:29:23,421 | INFO     | chi2: 0.004465606523002883
[2025-12-25 20:30:29] 2025-12-26 04:29:23,421 | INFO     | current memory leak: -1.61 B/s (using 152 data points, chi2=0.00)
[2025-12-25 20:30:29] 2025-12-26 04:29:23,421 | INFO     | could have reported an average CPU frequency of 4000 MHz (10 samples)
[2025-12-25 20:30:29] 2025-12-26 04:29:23,421 | INFO     | ..............................
[2025-12-25 20:30:29] 2025-12-26 04:29:23,421 | INFO     | . Timing measurements:
[2025-12-25 20:30:29] 2025-12-26 04:29:23,421 | INFO     | . get job = 0 s
[2025-12-25 20:30:29] 2025-12-26 04:29:23,421 | INFO     | . initial setup = 4 s
[2025-12-25 20:30:29] 2025-12-26 04:29:23,421 | INFO     | . payload setup = 6 s
[2025-12-25 20:30:29] 2025-12-26 04:29:23,421 | INFO     | . stage-in = 0 s
[2025-12-25 20:30:29] 2025-12-26 04:29:23,421 | INFO     | . payload execution = 10837 s
[2025-12-25 20:30:29] 2025-12-26 04:29:23,421 | INFO     | . stage-out = 4 s
[2025-12-25 20:30:29] 2025-12-26 04:29:23,421 | INFO     | . log creation = 0 s
[2025-12-25 20:30:29] 2025-12-26 04:29:23,422 | INFO     | ..............................
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | 
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | job summary report
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | --------------------------------------------------
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | PanDA job id: 6935198778
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | task id: 47929280
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | errors: (none)
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | pilot state: finished 
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | transexitcode: 0
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | exeerrorcode: 0
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | exeerrordiag: 
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | exitcode: 0
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | exitmsg: OK
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | cpuconsumptiontime: 23205 s
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | nevents: 400
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | neventsw: 0
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | pid: 617725
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | pgrp: 617725
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | corecount: 12
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | event service: False
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | sizes: {0: 2284049, 4: 2284311, 11: 2284339, 10847: 2313746, 10852: 2322772, 10855: 2322828, 10862: 2322980}
[2025-12-25 20:30:29] 2025-12-26 04:29:23,634 | INFO     | --------------------------------------------------
[2025-12-25 20:30:29] 2025-12-26 04:29:23,635 | INFO     | 
[2025-12-25 20:30:29] 2025-12-26 04:29:23,635 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc149/slots/3
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-25 20:30:29] 2025-12-26 04:29:23,684 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-25 20:30:29] 2025-12-26 04:29:23,685 | INFO     | job 6935198778 has completed (purged errors)
[2025-12-25 20:30:29] 2025-12-26 04:29:23,685 | INFO     | overall cleanup function is called
[2025-12-25 20:30:29] 2025-12-26 04:29:24,694 | INFO     | --- collectZombieJob: --- 10, [617725]
[2025-12-25 20:30:29] 2025-12-26 04:29:24,694 | INFO     | zombie collector waiting for pid 617725
[2025-12-25 20:30:29] 2025-12-26 04:29:24,694 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-25 20:30:29] 2025-12-26 04:29:24,694 | INFO     | collected zombie processes
[2025-12-25 20:30:29] 2025-12-26 04:29:24,694 | INFO     | will attempt to kill all subprocesses of pid=617725
[2025-12-25 20:30:29] 2025-12-26 04:29:25,052 | INFO     | process IDs to be killed: [617725] (in reverse order)
[2025-12-25 20:30:29] 2025-12-26 04:29:25,190 | WARNING  | found no corresponding commands to process id(s)
[2025-12-25 20:30:29] 2025-12-26 04:29:25,190 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-25 20:30:29] 2025-12-26 04:29:25,196 | INFO     | did not find any defunct processes belonging to 617725
[2025-12-25 20:30:29] 2025-12-26 04:29:25,200 | INFO     | did not find any defunct processes belonging to 617725
[2025-12-25 20:30:29] 2025-12-26 04:29:25,200 | INFO     | ready for new job
[2025-12-25 20:30:29] 2025-12-26 04:29:25,201 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-25 20:30:29] 2025-12-26 04:29:25,202 | INFO     | ***************************************
[2025-12-25 20:30:29] 2025-12-26 04:29:25,202 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-25 20:30:29] 2025-12-26 04:29:25,202 | INFO     | ***************************************
[2025-12-25 20:30:29] 2025-12-26 04:29:25,202 | INFO     | 
[2025-12-25 20:30:29] 2025-12-26 04:29:25,203 | INFO     | architecture information:
[2025-12-25 20:30:29] 2025-12-26 04:29:25,203 | INFO     | executing command: cat /etc/os-release
[2025-12-25 20:30:29] 2025-12-26 04:29:25,232 | INFO     | cat /etc/os-release:
[2025-12-25 20:30:29] NAME="CentOS Linux"
[2025-12-25 20:30:29] VERSION="7 (Core)"
[2025-12-25 20:30:29] ID="centos"
[2025-12-25 20:30:29] ID_LIKE="rhel fedora"
[2025-12-25 20:30:29] VERSION_ID="7"
[2025-12-25 20:30:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-25 20:30:29] ANSI_COLOR="0;31"
[2025-12-25 20:30:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-25 20:30:29] HOME_URL="https://www.centos.org/"
[2025-12-25 20:30:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-25 20:30:29] 
[2025-12-25 20:30:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-25 20:30:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-25 20:30:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-25 20:30:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-25 20:30:29] 
[2025-12-25 20:30:29] 2025-12-26 04:29:25,232 | INFO     | ***************************************
[2025-12-25 20:30:29] 2025-12-26 04:29:25,734 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc149/slots/3
[2025-12-25 20:30:29] 2025-12-26 04:29:25,757 | INFO     | sufficient remaining disk space (127460704256 B)
[2025-12-25 20:30:29] 2025-12-26 04:29:25,757 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-25 20:30:29] 2025-12-26 04:29:25,757 | INFO     | current server update state: UPDATING_FINAL
[2025-12-25 20:30:29] 2025-12-26 04:29:25,757 | INFO     | update_server=False
[2025-12-25 20:30:29] 2025-12-26 04:29:25,757 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-25 20:30:29] 2025-12-26 04:29:26,106 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-25 20:30:29] 2025-12-26 04:29:26,106 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-25 20:30:29] 2025-12-26 04:29:26,106 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-25 20:30:29] 2025-12-26 04:29:26,106 | INFO     | will abort loop
[2025-12-25 20:30:29] 2025-12-26 04:29:26,185 | INFO     | all payload control threads have been joined
[2025-12-25 20:30:29] 2025-12-26 04:29:26,387 | INFO     | all data control threads have been joined
[2025-12-25 20:30:29] 2025-12-26 04:29:26,595 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-25 20:30:29] 2025-12-26 04:29:26,762 | INFO     | [job] retrieve thread has finished
[2025-12-25 20:30:29] 2025-12-26 04:29:26,840 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-25 20:30:29] 2025-12-26 04:29:27,039 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-25 20:30:29] 2025-12-26 04:29:27,111 | INFO     | [job] job monitor thread has finished
[2025-12-25 20:30:29] 2025-12-26 04:29:27,190 | INFO     | [payload] control thread has finished
[2025-12-25 20:30:29] 2025-12-26 04:29:27,327 | INFO     | all job control threads have been joined
[2025-12-25 20:30:29] 2025-12-26 04:29:27,392 | INFO     | [data] control thread has finished
[2025-12-25 20:30:29] 2025-12-26 04:29:27,423 | INFO     | [payload] validate_post thread has finished
[2025-12-25 20:30:29] 2025-12-26 04:29:27,711 | INFO     | [payload] execute_payloads thread has finished
[2025-12-25 20:30:29] 2025-12-26 04:29:27,864 | INFO     | [job] create_data_payload thread has finished
[2025-12-25 20:30:29] 2025-12-26 04:29:27,866 | INFO     | [data] copytool_in thread has finished
[2025-12-25 20:30:29] 2025-12-26 04:29:27,922 | INFO     | [job] validate thread has finished
[2025-12-25 20:30:29] 2025-12-26 04:29:28,047 | INFO     | [payload] failed_post thread has finished
[2025-12-25 20:30:29] 2025-12-26 04:29:28,092 | INFO     | [payload] validate_pre thread has finished
[2025-12-25 20:30:29] 2025-12-26 04:29:28,332 | INFO     | [job] control thread has finished
[2025-12-25 20:30:29] 2025-12-26 04:29:28,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-25 20:30:29] 2025-12-26 04:29:28,600 | INFO     | [data] copytool_out thread has finished
[2025-12-25 20:30:29] 2025-12-26 04:29:29,489 | INFO     | [job] queue monitor thread has finished
[2025-12-25 20:30:29] 2025-12-26 04:29:30,845 | INFO     | [data] queue_monitor thread has finished
[2025-12-25 20:30:29] 2025-12-26 04:29:55,951 | INFO     | PID=610661 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-25 20:30:29] 2025-12-26 04:29:55,951 | INFO     | .. there are 16 such processes running
[2025-12-25 20:30:29] 2025-12-26 04:29:55,951 | INFO     | found 0 job(s) in 20 queues
[2025-12-25 20:30:29] 2025-12-26 04:29:55,951 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-25 20:30:29] 2025-12-26 04:29:55,951 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-25 20:30:29] 2025-12-26 04:30:23,521 | INFO     | [monitor] cgroup control has ended
[2025-12-25 20:30:29] 2025-12-26 04:30:23,931 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126948246259520)>', '<ExcThread(monitor, started 126947606648576)>']
[2025-12-25 20:30:29] 2025-12-26 04:30:24,094 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-25 20:30:29] 2025-12-26 04:30:24,094 | INFO     | [monitor] control thread has ended
[2025-12-25 20:30:29] 2025-12-26 04:30:28,956 | INFO     | all workflow threads have been joined
[2025-12-25 20:30:29] 2025-12-26 04:30:28,956 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-25 20:30:29] 2025-12-26 04:30:28,956 | INFO     | traces error code: 0
[2025-12-25 20:30:29] 2025-12-26 04:30:28,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-25 20:30:29] 2025-12-26 04:30:29,067 [wrapper] ==== pilot stdout END ====
[2025-12-25 20:30:29] 2025-12-26 04:30:29,076 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-25 20:30:29] 2025-12-26 04:30:29,083 [wrapper] pilotpid: 610661
[2025-12-25 20:30:29] 2025-12-26 04:30:29,089 [wrapper] Pilot exit status: 0
[2025-12-25 20:30:29] 2025-12-26 04:30:29,111 [wrapper] pandaids: 6935198778
[2025-12-25 20:30:29] 2025-12-26 04:30:29,164 [wrapper] cleanup supervisor_pilot 1038797 610662
[2025-12-25 20:30:29] 2025-12-26 04:30:29,167 [wrapper] Test setup, not cleaning
[2025-12-25 20:30:29] 2025-12-26 04:30:29,169 [wrapper] apfmon messages muted
[2025-12-25 20:30:29] 2025-12-26 04:30:29,171 [wrapper] ==== wrapper stdout END ====
[2025-12-25 20:30:29] 2025-12-26 04:30:29,172 [wrapper] ==== wrapper stderr END ====
[2025-12-25 20:30:29]  *** Error codes and diagnostics ***
[2025-12-25 20:30:29]     "exeErrorCode": 0,
[2025-12-25 20:30:29]     "exeErrorDiag": "",
[2025-12-25 20:30:29]     "pilotErrorCode": 0,
[2025-12-25 20:30:29]     "pilotErrorDiag": "",
[2025-12-25 20:30:29]  *** Listing of results directory ***
[2025-12-25 20:30:29] total 439720
[2025-12-25 20:30:29] -rw-r--r-- 1 root root    579449 Dec 19 03:34 pilot3.tar.gz
[2025-12-25 20:30:29] -rw-r--r-- 1 root root      5112 Dec 19 03:35 queuedata.json
[2025-12-25 20:30:29] -rwx------ 1 4871 1028     36322 Dec 19 03:35 runpilot2-wrapper.sh
[2025-12-25 20:30:29] -rw-r--r-- 1 root root       100 Dec 25 17:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-25 20:30:29] -rwxr-xr-x 1 root root      7986 Dec 25 17:27 run_atlas
[2025-12-25 20:30:29] -rw-r--r-- 1 root root       105 Dec 25 17:27 job.xml
[2025-12-25 20:30:29] -rw-r--r-- 2 root root 252924961 Dec 25 17:27 EVNT.47929278._000133.pool.root.1
[2025-12-25 20:30:29] -rw-r--r-- 2 root root     15847 Dec 25 17:27 start_atlas.sh
[2025-12-25 20:30:29] drwxrwx--x 2 root root      4096 Dec 25 17:27 shared
[2025-12-25 20:30:29] -rw-r--r-- 2 root root    592411 Dec 25 17:27 input.tar.gz
[2025-12-25 20:30:29] -rw-r--r-- 1 root root         0 Dec 25 17:27 boinc_lockfile
[2025-12-25 20:30:29] -rw-r--r-- 1 root root      2567 Dec 25 17:27 pandaJob.out
[2025-12-25 20:30:29] -rw------- 1 root root    989280 Dec 25 17:28 agis_schedconf.cvmfs.json
[2025-12-25 20:30:29] drwxr-xr-x 5  320  320      4096 Dec 25 17:28 pilot3
[2025-12-25 20:30:29] -rw-r--r-- 1 root root      7053 Dec 25 17:33 init_data.xml
[2025-12-25 20:30:29] -rw------- 1 root root 189373549 Dec 25 20:28 HITS.47929280._003154.pool.root.1
[2025-12-25 20:30:29] -rw-r--r-- 1 root root       530 Dec 25 20:28 boinc_task_state.xml
[2025-12-25 20:30:29] -rw------- 1 root root      1022 Dec 25 20:29 memory_monitor_summary.json
[2025-12-25 20:30:29] -rw------- 1 root root   1516240 Dec 25 20:29 agis_ddmendpoints.agis.ALL.json
[2025-12-25 20:30:29] -rw------- 1 root root    467459 Dec 25 20:29 log.47929280._003154.job.log.tgz.1
[2025-12-25 20:30:29] -rw------- 1 root root        95 Dec 25 20:29 pilot_heartbeat.json
[2025-12-25 20:30:29] -rw------- 1 root root      7744 Dec 25 20:29 heartbeat.json
[2025-12-25 20:30:29] -rw-r--r-- 1 root root        28 Dec 25 20:30 wrapper_checkpoint.txt
[2025-12-25 20:30:29] -rw-r--r-- 1 root root      8192 Dec 25 20:30 boinc_mmap_file
[2025-12-25 20:30:29] -rw------- 1 root root      5024 Dec 25 20:30 pilotlog.txt
[2025-12-25 20:30:29] -rw------- 1 root root   1563350 Dec 25 20:30 log.47929280._003154.job.log.1
[2025-12-25 20:30:29] -rw------- 1 root root       357 Dec 25 20:30 output.list
[2025-12-25 20:30:29] -rw-r--r-- 1 root root       620 Dec 25 20:30 runtime_log
[2025-12-25 20:30:29] -rw------- 1 root root   2048000 Dec 25 20:30 result.tar.gz
[2025-12-25 20:30:29] -rw-r--r-- 1 root root      9021 Dec 25 20:30 runtime_log.err
[2025-12-25 20:30:29] -rw------- 1 root root       652 Dec 25 20:30 kCNODmBxnq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5sfKDm098eOn.diag
[2025-12-25 20:30:29] -rw-r--r-- 1 root root     21463 Dec 25 20:30 stderr.txt
[2025-12-25 20:30:29] HITS file was successfully produced:
[2025-12-25 20:30:29] -rw------- 1 root root 189373549 Dec 25 20:28 shared/HITS.pool.root.1
[2025-12-25 20:30:29]  *** Contents of shared directory: ***
[2025-12-25 20:30:29] total 434540
[2025-12-25 20:30:29] -rw-r--r-- 2 root root 252924961 Dec 25 17:27 ATLAS.root_0
[2025-12-25 20:30:29] -rw-r--r-- 2 root root     15847 Dec 25 17:27 start_atlas.sh
[2025-12-25 20:30:29] -rw-r--r-- 2 root root    592411 Dec 25 17:27 input.tar.gz
[2025-12-25 20:30:29] -rw------- 1 root root 189373549 Dec 25 20:28 HITS.pool.root.1
[2025-12-25 20:30:29] -rw------- 1 root root   2048000 Dec 25 20:30 result.tar.gz
20:30:30 (606763): run_atlas exited; CPU time 23380.855347
20:30:30 (606763): called boinc_finish(0)

</stderr_txt>
]]>

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