Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
14:30:07 (149635): wrapper (7.7.26015): starting
14:30:07 (149635): wrapper: running run_atlas (--nthreads 12)
[2025-12-25 14:30:07] Arguments: --nthreads 12
[2025-12-25 14:30:07] Threads: 12
[2025-12-25 14:30:07] Checking for CVMFS
[2025-12-25 14:30:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-25 14:30:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-25 14:30:07] Running cvmfs_config stat atlas.cern.ch
[2025-12-25 14:30:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-25 14:30:07] 2.13.3.0 3561 0 57396 154420 3 249 3089928 4096000 2653 130560 0 354014 99.995 2793 321 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-25 14:30:07] CVMFS is ok
[2025-12-25 14:30:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-25 14:30:07] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-25 14:30:07] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-25 14:30:07] Further information can be found at the LHC@home message board.
[2025-12-25 14:30:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-25 14:30:07] Checking for apptainer binary...
[2025-12-25 14:30:07] apptainer is not installed, using version from CVMFS
[2025-12-25 14:30:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-25 14:30:07] 7950x-linux
[2025-12-25 14:30:07] apptainer works
[2025-12-25 14:30:07] Set ATHENA_PROC_NUMBER=12
[2025-12-25 14:30:07] Set ATHENA_CORE_NUMBER=12
[2025-12-25 14:30:07] Starting ATLAS job with PandaID=6935455560
[2025-12-25 14:30:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc147/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-25 17:30:37]  *** The last 200 lines of the pilot log: ***
[2025-12-25 17:30:37] 2025-12-26 01:29:55,224 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-25 17:30:37] 2025-12-26 01:29:55,948 | INFO     | time since job start (10781s) is within the limit (174528.0s)
[2025-12-25 17:30:37] 2025-12-26 01:29:57,953 | INFO     | time since job start (10783s) is within the limit (174528.0s)
[2025-12-25 17:30:37] 2025-12-26 01:29:58,006 | WARNING  | process 243065 can no longer be monitored (due to stat problems) - aborting
[2025-12-25 17:30:37] 2025-12-26 01:29:58,007 | INFO     | using path: /var/lib/multiboinc/boinc147/slots/5/PanDA_Pilot-6935455560/memory_monitor_summary.json (trf name=prmon)
[2025-12-25 17:30:37] 2025-12-26 01:29:58,258 | INFO     | number of running child processes to parent process 243065: 1
[2025-12-25 17:30:37] 2025-12-26 01:29:58,259 | INFO     | maximum number of monitored processes: 6
[2025-12-25 17:30:37] 2025-12-26 01:29:59,742 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-25 17:30:37] 2025-12-26 01:29:59,745 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4000.0383749999996
[2025-12-25 17:30:37] 2025-12-26 01:29:59,748 | INFO     | using path: /var/lib/multiboinc/boinc147/slots/5/PanDA_Pilot-6935455560/memory_monitor_summary.json (trf name=prmon)
[2025-12-25 17:30:37] 2025-12-26 01:29:59,749 | INFO     | extracted standard info from prmon json
[2025-12-25 17:30:37] 2025-12-26 01:29:59,749 | INFO     | extracted standard memory fields from prmon json
[2025-12-25 17:30:37] 2025-12-26 01:29:59,749 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-25 17:30:37] 2025-12-26 01:29:59,749 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-25 17:30:37] 2025-12-26 01:29:59,749 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-25 17:30:37] 2025-12-26 01:29:59,751 | INFO     | fitting pss+swap vs Time
[2025-12-25 17:30:37] 2025-12-26 01:29:59,751 | INFO     | sum of square deviations: 1719429448.0
[2025-12-25 17:30:37] 2025-12-26 01:29:59,751 | INFO     | sum of deviations: 25454097690.0
[2025-12-25 17:30:37] 2025-12-26 01:29:59,751 | INFO     | mean x: 1766707201.0
[2025-12-25 17:30:37] 2025-12-26 01:29:59,751 | INFO     | mean y: 2664348.0395480227
[2025-12-25 17:30:37] 2025-12-26 01:29:59,751 | INFO     | intersect: -26151323962.552925
[2025-12-25 17:30:37] 2025-12-26 01:29:59,752 | INFO     | chi2: 1.153640124096038
[2025-12-25 17:30:37] 2025-12-26 01:29:59,752 | INFO     | sum of square deviations: 1577789583.0
[2025-12-25 17:30:37] 2025-12-26 01:29:59,752 | INFO     | sum of deviations: 24528079077.0
[2025-12-25 17:30:37] 2025-12-26 01:29:59,752 | INFO     | mean x: 1766707048.5
[2025-12-25 17:30:37] 2025-12-26 01:29:59,752 | INFO     | mean y: 2663351.011627907
[2025-12-25 17:30:37] 2025-12-26 01:29:59,752 | INFO     | intersect: -27462298173.899944
[2025-12-25 17:30:37] 2025-12-26 01:29:59,753 | INFO     | chi2: 1.154315857066847
[2025-12-25 17:30:37] 2025-12-26 01:29:59,757 | INFO     | current chi2=1.154315857066847 (change=-0.05857398305545278 %)
[2025-12-25 17:30:37] 2025-12-26 01:29:59,757 | INFO     | right removable region: 171
[2025-12-25 17:30:37] 2025-12-26 01:29:59,757 | INFO     | sum of square deviations: 1577789583.0
[2025-12-25 17:30:37] 2025-12-26 01:29:59,757 | INFO     | sum of deviations: 3012799668.4999995
[2025-12-25 17:30:37] 2025-12-26 01:29:59,757 | INFO     | mean x: 1766707353.5
[2025-12-25 17:30:37] 2025-12-26 01:29:59,757 | INFO     | mean y: 2688124.9127906975
[2025-12-25 17:30:37] 2025-12-26 01:29:59,757 | INFO     | intersect: -3370851278.7640247
[2025-12-25 17:30:37] 2025-12-26 01:29:59,758 | INFO     | chi2: 0.002435028497686485
[2025-12-25 17:30:37] 2025-12-26 01:29:59,758 | INFO     | current chi2=0.002435028497686485 (change=99.78892650777084 %)
[2025-12-25 17:30:37] 2025-12-26 01:29:59,758 | INFO     | sum of square deviations: 1444149868.0
[2025-12-25 17:30:37] 2025-12-26 01:29:59,758 | INFO     | sum of deviations: 2285917477.0
[2025-12-25 17:30:37] 2025-12-26 01:29:59,758 | INFO     | mean x: 1766707506.0
[2025-12-25 17:30:37] 2025-12-26 01:29:59,758 | INFO     | mean y: 2688947.508982036
[2025-12-25 17:30:37] 2025-12-26 01:29:59,758 | INFO     | intersect: -2793798906.141178
[2025-12-25 17:30:37] 2025-12-26 01:29:59,758 | INFO     | chi2: 0.0020354915877452647
[2025-12-25 17:30:37] 2025-12-26 01:29:59,758 | INFO     | current chi2=0.0020354915877452647 (change=16.407894623032927 %)
[2025-12-25 17:30:37] 2025-12-26 01:29:59,758 | INFO     | left removable region: 20
[2025-12-25 17:30:37] 2025-12-26 01:29:59,758 | INFO     | sum of square deviations: 1067554900.0
[2025-12-25 17:30:37] 2025-12-26 01:29:59,759 | INFO     | sum of deviations: 1890088965.0000005
[2025-12-25 17:30:37] 2025-12-26 01:29:59,759 | INFO     | mean x: 1766707628.0
[2025-12-25 17:30:37] 2025-12-26 01:29:59,759 | INFO     | mean y: 2688717.3245033114
[2025-12-25 17:30:37] 2025-12-26 01:29:59,759 | INFO     | intersect: -3125239028.652894
[2025-12-25 17:30:37] 2025-12-26 01:29:59,759 | INFO     | chi2: 0.0019796024940813995
[2025-12-25 17:30:37] 2025-12-26 01:29:59,759 | INFO     | current memory leak: 1.77 B/s (using 151 data points, chi2=0.00)
[2025-12-25 17:30:37] 2025-12-26 01:29:59,759 | INFO     | could have reported an average CPU frequency of 3999 MHz (9 samples)
[2025-12-25 17:30:37] 2025-12-26 01:29:59,760 | INFO     | ..............................
[2025-12-25 17:30:37] 2025-12-26 01:29:59,760 | INFO     | . Timing measurements:
[2025-12-25 17:30:37] 2025-12-26 01:29:59,760 | INFO     | . get job = 0 s
[2025-12-25 17:30:37] 2025-12-26 01:29:59,760 | INFO     | . initial setup = 2 s
[2025-12-25 17:30:37] 2025-12-26 01:29:59,760 | INFO     | . payload setup = 2 s
[2025-12-25 17:30:37] 2025-12-26 01:29:59,760 | INFO     | . stage-in = 0 s
[2025-12-25 17:30:37] 2025-12-26 01:29:59,760 | INFO     | . payload execution = 10759 s
[2025-12-25 17:30:37] 2025-12-26 01:29:59,760 | INFO     | . stage-out = 0 s
[2025-12-25 17:30:37] 2025-12-26 01:29:59,760 | INFO     | . log creation = 0 s
[2025-12-25 17:30:37] 2025-12-26 01:29:59,760 | INFO     | ..............................
[2025-12-25 17:30:37] 2025-12-26 01:29:59,822 | INFO     | 
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | job summary report
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | --------------------------------------------------
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | PanDA job id: 6935455560
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | task id: 47929288
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | errors: (none)
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | pilot state: finished 
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | transexitcode: 0
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | exeerrorcode: 0
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | exeerrordiag: 
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | exitcode: 0
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | exitmsg: OK
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | cpuconsumptiontime: 22633 s
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | nevents: 400
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | neventsw: 0
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | pid: 243065
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | pgrp: 243065
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | corecount: 12
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | event service: False
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | sizes: {0: 2284027, 2: 2284289, 11: 2284317, 10765: 2313432, 10766: 2322458, 10768: 2322514, 10773: 2322900}
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | --------------------------------------------------
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | 
[2025-12-25 17:30:37] 2025-12-26 01:29:59,823 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc147/slots/5
[2025-12-25 17:30:37] 2025-12-26 01:29:59,840 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-25 17:30:37] 2025-12-26 01:29:59,840 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-25 17:30:37] 2025-12-26 01:29:59,840 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-25 17:30:37] 2025-12-26 01:29:59,840 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-25 17:30:37] 2025-12-26 01:29:59,840 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-25 17:30:37] 2025-12-26 01:29:59,840 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-25 17:30:37] 2025-12-26 01:29:59,840 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-25 17:30:37] 2025-12-26 01:29:59,840 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-25 17:30:37] 2025-12-26 01:29:59,840 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-25 17:30:37] 2025-12-26 01:29:59,840 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-25 17:30:37] 2025-12-26 01:29:59,840 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-25 17:30:37] 2025-12-26 01:29:59,840 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-25 17:30:37] 2025-12-26 01:29:59,840 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-25 17:30:37] 2025-12-26 01:29:59,840 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-25 17:30:37] 2025-12-26 01:29:59,840 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-25 17:30:37] 2025-12-26 01:29:59,840 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-25 17:30:37] 2025-12-26 01:29:59,840 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-25 17:30:37] 2025-12-26 01:29:59,840 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-25 17:30:37] 2025-12-26 01:29:59,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-25 17:30:37] 2025-12-26 01:29:59,841 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-25 17:30:37] 2025-12-26 01:29:59,841 | INFO     | job 6935455560 has completed (purged errors)
[2025-12-25 17:30:37] 2025-12-26 01:29:59,841 | INFO     | overall cleanup function is called
[2025-12-25 17:30:37] 2025-12-26 01:30:00,848 | INFO     | --- collectZombieJob: --- 10, [243065]
[2025-12-25 17:30:37] 2025-12-26 01:30:00,848 | INFO     | zombie collector waiting for pid 243065
[2025-12-25 17:30:37] 2025-12-26 01:30:00,848 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-25 17:30:37] 2025-12-26 01:30:00,848 | INFO     | collected zombie processes
[2025-12-25 17:30:37] 2025-12-26 01:30:00,848 | INFO     | will attempt to kill all subprocesses of pid=243065
[2025-12-25 17:30:37] 2025-12-26 01:30:01,097 | INFO     | process IDs to be killed: [243065] (in reverse order)
[2025-12-25 17:30:37] 2025-12-26 01:30:01,206 | WARNING  | found no corresponding commands to process id(s)
[2025-12-25 17:30:37] 2025-12-26 01:30:01,206 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-25 17:30:37] 2025-12-26 01:30:01,211 | INFO     | did not find any defunct processes belonging to 243065
[2025-12-25 17:30:37] 2025-12-26 01:30:01,215 | INFO     | did not find any defunct processes belonging to 243065
[2025-12-25 17:30:37] 2025-12-26 01:30:01,215 | INFO     | ready for new job
[2025-12-25 17:30:37] 2025-12-26 01:30:01,215 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-25 17:30:37] 2025-12-26 01:30:01,217 | INFO     | ***************************************
[2025-12-25 17:30:37] 2025-12-26 01:30:01,217 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-25 17:30:37] 2025-12-26 01:30:01,217 | INFO     | ***************************************
[2025-12-25 17:30:37] 2025-12-26 01:30:01,217 | INFO     | 
[2025-12-25 17:30:37] 2025-12-26 01:30:01,218 | INFO     | architecture information:
[2025-12-25 17:30:37] 2025-12-26 01:30:01,218 | INFO     | executing command: cat /etc/os-release
[2025-12-25 17:30:37] 2025-12-26 01:30:01,238 | INFO     | cat /etc/os-release:
[2025-12-25 17:30:37] NAME="CentOS Linux"
[2025-12-25 17:30:37] VERSION="7 (Core)"
[2025-12-25 17:30:37] ID="centos"
[2025-12-25 17:30:37] ID_LIKE="rhel fedora"
[2025-12-25 17:30:37] VERSION_ID="7"
[2025-12-25 17:30:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-25 17:30:37] ANSI_COLOR="0;31"
[2025-12-25 17:30:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-25 17:30:37] HOME_URL="https://www.centos.org/"
[2025-12-25 17:30:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-25 17:30:37] 
[2025-12-25 17:30:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-25 17:30:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-25 17:30:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-25 17:30:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-25 17:30:37] 
[2025-12-25 17:30:37] 2025-12-26 01:30:01,239 | INFO     | ***************************************
[2025-12-25 17:30:37] 2025-12-26 01:30:01,741 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc147/slots/5
[2025-12-25 17:30:37] 2025-12-26 01:30:01,753 | INFO     | sufficient remaining disk space (126486577152 B)
[2025-12-25 17:30:37] 2025-12-26 01:30:01,753 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-25 17:30:37] 2025-12-26 01:30:01,753 | INFO     | current server update state: UPDATING_FINAL
[2025-12-25 17:30:37] 2025-12-26 01:30:01,753 | INFO     | update_server=False
[2025-12-25 17:30:37] 2025-12-26 01:30:01,753 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-25 17:30:37] 2025-12-26 01:30:01,753 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-25 17:30:37] 2025-12-26 01:30:01,754 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-25 17:30:37] 2025-12-26 01:30:01,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-25 17:30:37] 2025-12-26 01:30:01,769 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-25 17:30:37] 2025-12-26 01:30:01,769 | INFO     | aborting loop
[2025-12-25 17:30:37] 2025-12-26 01:30:01,972 | INFO     | all payload control threads have been joined
[2025-12-25 17:30:37] 2025-12-26 01:30:02,377 | INFO     | all data control threads have been joined
[2025-12-25 17:30:37] 2025-12-26 01:30:02,758 | INFO     | [job] retrieve thread has finished
[2025-12-25 17:30:37] 2025-12-26 01:30:02,759 | INFO     | [job] queue monitor thread has finished
[2025-12-25 17:30:37] 2025-12-26 01:30:02,774 | INFO     | [job] job monitor thread has finished
[2025-12-25 17:30:37] 2025-12-26 01:30:02,920 | INFO     | [payload] validate_post thread has finished
[2025-12-25 17:30:37] 2025-12-26 01:30:02,977 | INFO     | [payload] control thread has finished
[2025-12-25 17:30:37] 2025-12-26 01:30:03,277 | INFO     | all job control threads have been joined
[2025-12-25 17:30:37] 2025-12-26 01:30:03,319 | INFO     | [job] create_data_payload thread has finished
[2025-12-25 17:30:37] 2025-12-26 01:30:03,382 | INFO     | [data] control thread has finished
[2025-12-25 17:30:37] 2025-12-26 01:30:03,396 | INFO     | [payload] validate_pre thread has finished
[2025-12-25 17:30:37] 2025-12-26 01:30:03,649 | INFO     | [job] validate thread has finished
[2025-12-25 17:30:37] 2025-12-26 01:30:03,750 | INFO     | [payload] execute_payloads thread has finished
[2025-12-25 17:30:37] 2025-12-26 01:30:03,759 | INFO     | [data] copytool_out thread has finished
[2025-12-25 17:30:37] 2025-12-26 01:30:03,825 | INFO     | [data] copytool_in thread has finished
[2025-12-25 17:30:37] 2025-12-26 01:30:03,892 | INFO     | [payload] failed_post thread has finished
[2025-12-25 17:30:37] 2025-12-26 01:30:04,282 | INFO     | [job] control thread has finished
[2025-12-25 17:30:37] 2025-12-26 01:30:05,759 | INFO     | [data] queue_monitor thread has finished
[2025-12-25 17:30:37] 2025-12-26 01:30:11,408 [wrapper] supervise_pilot (15 min periods counter: 13)
[2025-12-25 17:30:37] 2025-12-26 01:30:12,621 | INFO     | job.realtimelogging is not enabled
[2025-12-25 17:30:37] 2025-12-26 01:30:13,626 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-25 17:30:37] 2025-12-26 01:30:31,271 | INFO     | PID=172311 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-25 17:30:37] 2025-12-26 01:30:31,271 | INFO     | .. there are 12 such processes running
[2025-12-25 17:30:37] 2025-12-26 01:30:31,271 | INFO     | found 0 job(s) in 20 queues
[2025-12-25 17:30:37] 2025-12-26 01:30:31,271 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-25 17:30:37] 2025-12-26 01:30:31,271 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-25 17:30:37] 2025-12-26 01:30:32,047 | INFO     | [monitor] cgroup control has ended
[2025-12-25 17:30:37] 2025-12-26 01:30:32,291 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139022907565888)>', '<ExcThread(monitor, started 139022420653824)>']
[2025-12-25 17:30:37] 2025-12-26 01:30:33,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-25 17:30:37] 2025-12-26 01:30:33,281 | INFO     | [monitor] control thread has ended
[2025-12-25 17:30:37] 2025-12-26 01:30:37,316 | INFO     | all workflow threads have been joined
[2025-12-25 17:30:37] 2025-12-26 01:30:37,316 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-25 17:30:37] 2025-12-26 01:30:37,316 | INFO     | traces error code: 0
[2025-12-25 17:30:37] 2025-12-26 01:30:37,316 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-25 17:30:37] 2025-12-26 01:30:37,396 [wrapper] ==== pilot stdout END ====
[2025-12-25 17:30:37] 2025-12-26 01:30:37,405 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-25 17:30:37] 2025-12-26 01:30:37,407 [wrapper] pilotpid: 172311
[2025-12-25 17:30:37] 2025-12-26 01:30:37,414 [wrapper] Pilot exit status: 0
[2025-12-25 17:30:37] 2025-12-26 01:30:37,430 [wrapper] pandaids: 6935455560
[2025-12-25 17:30:37] 2025-12-26 01:30:37,474 [wrapper] cleanup supervisor_pilot  636217 172312
[2025-12-25 17:30:37] 2025-12-26 01:30:37,476 [wrapper] Test setup, not cleaning
[2025-12-25 17:30:37] 2025-12-26 01:30:37,478 [wrapper] apfmon messages muted
[2025-12-25 17:30:37] 2025-12-26 01:30:37,479 [wrapper] ==== wrapper stdout END ====
[2025-12-25 17:30:37] 2025-12-26 01:30:37,485 [wrapper] ==== wrapper stderr END ====
[2025-12-25 17:30:37]  *** Error codes and diagnostics ***
[2025-12-25 17:30:37]     "exeErrorCode": 0,
[2025-12-25 17:30:37]     "exeErrorDiag": "",
[2025-12-25 17:30:37]     "pilotErrorCode": 0,
[2025-12-25 17:30:37]     "pilotErrorDiag": "",
[2025-12-25 17:30:37]  *** Listing of results directory ***
[2025-12-25 17:30:37] total 432032
[2025-12-25 17:30:37] -rw-r--r-- 1 root root    579449 Dec 19 08:45 pilot3.tar.gz
[2025-12-25 17:30:37] -rwx------ 1 4871 1028     36322 Dec 19 08:46 runpilot2-wrapper.sh
[2025-12-25 17:30:37] -rw-r--r-- 1 root root      5112 Dec 19 08:49 queuedata.json
[2025-12-25 17:30:37] -rw-r--r-- 1 root root       100 Dec 25 14:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-25 17:30:37] -rwxr-xr-x 1 root root      7986 Dec 25 14:30 run_atlas
[2025-12-25 17:30:37] -rw-r--r-- 1 root root       105 Dec 25 14:30 job.xml
[2025-12-25 17:30:37] -rw-r--r-- 2 root root 251556954 Dec 25 14:30 EVNT.47929286._000069.pool.root.1
[2025-12-25 17:30:37] -rw-r--r-- 2 root root     15847 Dec 25 14:30 start_atlas.sh
[2025-12-25 17:30:37] drwxrwx--x 2 root root      4096 Dec 25 14:30 shared
[2025-12-25 17:30:37] -rw-r--r-- 2 root root    592400 Dec 25 14:30 input.tar.gz
[2025-12-25 17:30:37] -rw-r--r-- 1 root root         0 Dec 25 14:30 boinc_lockfile
[2025-12-25 17:30:37] -rw-r--r-- 1 root root      2547 Dec 25 14:30 pandaJob.out
[2025-12-25 17:30:37] -rw------- 1 root root    989280 Dec 25 14:30 agis_schedconf.cvmfs.json
[2025-12-25 17:30:37] -rw------- 1 root root   1516240 Dec 25 14:30 agis_ddmendpoints.agis.ALL.json
[2025-12-25 17:30:37] drwxr-xr-x 5  320  320      4096 Dec 25 14:30 pilot3
[2025-12-25 17:30:37] -rw-r--r-- 1 root root      9501 Dec 25 14:31 init_data.xml
[2025-12-25 17:30:37] -rw-r--r-- 1 root root       530 Dec 25 17:29 boinc_task_state.xml
[2025-12-25 17:30:37] -rw------- 1 root root 182904494 Dec 25 17:29 HITS.47929288._001653.pool.root.1
[2025-12-25 17:30:37] -rw------- 1 root root      1028 Dec 25 17:29 memory_monitor_summary.json
[2025-12-25 17:30:37] -rw------- 1 root root    465225 Dec 25 17:29 log.47929288._001653.job.log.tgz.1
[2025-12-25 17:30:37] -rw------- 1 root root      7758 Dec 25 17:29 heartbeat.json
[2025-12-25 17:30:37] -rw-r--r-- 1 root root      8192 Dec 25 17:30 boinc_mmap_file
[2025-12-25 17:30:37] -rw-r--r-- 1 root root        28 Dec 25 17:30 wrapper_checkpoint.txt
[2025-12-25 17:30:37] -rw------- 1 root root        95 Dec 25 17:30 pilot_heartbeat.json
[2025-12-25 17:30:37] -rw------- 1 root root      4910 Dec 25 17:30 pilotlog.txt
[2025-12-25 17:30:37] -rw------- 1 root root   1545054 Dec 25 17:30 log.47929288._001653.job.log.1
[2025-12-25 17:30:37] -rw------- 1 root root       357 Dec 25 17:30 output.list
[2025-12-25 17:30:37] -rw-r--r-- 1 root root       620 Dec 25 17:30 runtime_log
[2025-12-25 17:30:37] -rw------- 1 root root   2027520 Dec 25 17:30 result.tar.gz
[2025-12-25 17:30:37] -rw-r--r-- 1 root root      9021 Dec 25 17:30 runtime_log.err
[2025-12-25 17:30:37] -rw------- 1 root root       655 Dec 25 17:30 573NDmensq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhgbKDmprx1Xm.diag
[2025-12-25 17:30:37] -rw-r--r-- 1 root root     21519 Dec 25 17:30 stderr.txt
[2025-12-25 17:30:37] HITS file was successfully produced:
[2025-12-25 17:30:37] -rw------- 1 root root 182904494 Dec 25 17:29 shared/HITS.pool.root.1
[2025-12-25 17:30:37]  *** Contents of shared directory: ***
[2025-12-25 17:30:37] total 426868
[2025-12-25 17:30:37] -rw-r--r-- 2 root root 251556954 Dec 25 14:30 ATLAS.root_0
[2025-12-25 17:30:37] -rw-r--r-- 2 root root     15847 Dec 25 14:30 start_atlas.sh
[2025-12-25 17:30:37] -rw-r--r-- 2 root root    592400 Dec 25 14:30 input.tar.gz
[2025-12-25 17:30:37] -rw------- 1 root root 182904494 Dec 25 17:29 HITS.pool.root.1
[2025-12-25 17:30:37] -rw------- 1 root root   2027520 Dec 25 17:30 result.tar.gz
17:30:39 (149635): run_atlas exited; CPU time 22809.888790
17:30:39 (149635): called boinc_finish(0)

</stderr_txt>
]]>

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