Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
03:53:33 (2135530): wrapper (7.7.26015): starting
03:53:33 (2135530): wrapper: running run_atlas (--nthreads 12)
[2025-12-24 03:53:33] Arguments: --nthreads 12
[2025-12-24 03:53:33] Threads: 12
[2025-12-24 03:53:33] Checking for CVMFS
[2025-12-24 03:53:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-24 03:53:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-24 03:53:34] Running cvmfs_config stat atlas.cern.ch
[2025-12-24 03:53:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-24 03:53:34] 2.13.3.0 11319 25729 57268 154368 1 93 3710713 4096000 3114 130560 0 4898260247 100.000 2157760 482 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-24 03:53:34] CVMFS is ok
[2025-12-24 03:53:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-24 03:53:34] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-24 03:53:34] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-24 03:53:34] Further information can be found at the LHC@home message board.
[2025-12-24 03:53:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-24 03:53:34] Checking for apptainer binary...
[2025-12-24 03:53:34] apptainer is not installed, using version from CVMFS
[2025-12-24 03:53:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-24 03:53:34] 7950x-linux
[2025-12-24 03:53:34] apptainer works
[2025-12-24 03:53:34] Set ATHENA_PROC_NUMBER=12
[2025-12-24 03:53:34] Set ATHENA_CORE_NUMBER=12
[2025-12-24 03:53:34] Starting ATLAS job with PandaID=6937247595
[2025-12-24 03:53:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc143/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-24 05:19:04]  *** The last 200 lines of the pilot log: ***
[2025-12-24 05:19:04]  is_tar=False
[2025-12-24 05:19:04]  lfn=log.47898763._026245.job.log.tgz.1
[2025-12-24 05:19:04]  mtime=0
[2025-12-24 05:19:04]  protocol_id=None
[2025-12-24 05:19:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-24 05:19:04]  replicas=None
[2025-12-24 05:19:04]  scope=mc23_13p6TeV
[2025-12-24 05:19:04]  status=None
[2025-12-24 05:19:04]  status_code=0
[2025-12-24 05:19:04]  storage_token=
[2025-12-24 05:19:04]  surl=/var/lib/multiboinc/boinc143/slots/3/PanDA_Pilot-6937247595/log.47898763._026245.job.log.tgz.1
[2025-12-24 05:19:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/be/log.47898763._026245.job.log.tgz.1
[2025-12-24 05:19:04]  workdir=None
[2025-12-24 05:19:04] ]
[2025-12-24 05:19:04] 2025-12-24 13:18:13,886 | INFO     | transferring file log.47898763._026245.job.log.tgz.1 from /var/lib/multiboinc/boinc143/slots/3/PanDA_Pilot-6937247595/log.47898763._026245.job.log.tgz.1 to /var/li
[2025-12-24 05:19:04] 2025-12-24 13:18:13,886 | INFO     | executing command: /usr/bin/env mv /var/lib/multiboinc/boinc143/slots/3/PanDA_Pilot-6937247595/log.47898763._026245.job.log.tgz.1 /var/lib/multiboinc/boinc143/slot
[2025-12-24 05:19:04] 2025-12-24 13:18:13,907 | INFO     | adding to output.list: log.47898763._026245.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/be/log.47898763._026245.job.log.tg
[2025-12-24 05:19:04] 2025-12-24 13:18:13,907 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-24 05:19:04] 2025-12-24 13:18:13,908 | INFO     | summary of transferred files:
[2025-12-24 05:19:04] 2025-12-24 13:18:13,908 | INFO     |  -- lfn=log.47898763._026245.job.log.tgz.1, status_code=0, status=transferred
[2025-12-24 05:19:04] 2025-12-24 13:18:13,908 | INFO     | stage-out finished correctly
[2025-12-24 05:19:04] 2025-12-24 13:18:13,964 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-24 05:19:04] 2025-12-24 13:18:14,956 | INFO     | monitor loop #381: job 0:6937247595 is in state 'finished'
[2025-12-24 05:19:04] 2025-12-24 13:18:14,956 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-24 05:19:04] 2025-12-24 13:18:15,484 | INFO     | job 6937247595 has state=finished
[2025-12-24 05:19:04] 2025-12-24 13:18:15,484 | INFO     | preparing for final server update for job 6937247595 in state='finished'
[2025-12-24 05:19:04] 2025-12-24 13:18:15,484 | INFO     | this job has now completed (state=finished)
[2025-12-24 05:19:04] 2025-12-24 13:18:15,484 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-24 05:19:04] 2025-12-24 13:18:15,484 | INFO     | log transfer has been attempted: DONE
[2025-12-24 05:19:04] 2025-12-24 13:18:15,484 | INFO     | job 6937247595 has finished - writing final server update
[2025-12-24 05:19:04] 2025-12-24 13:18:15,485 | INFO     | total number of processed events: 400 (read)
[2025-12-24 05:19:04] 2025-12-24 13:18:15,485 | INFO     | executing command: lscpu
[2025-12-24 05:19:04] 2025-12-24 13:18:15,512 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-24 05:19:04] 2025-12-24 13:18:15,821 | INFO     | time since job start (5065s) is within the limit (174528.0s)
[2025-12-24 05:19:04] 2025-12-24 13:18:17,459 | INFO     | monitor loop #382: job 0:6937247595 is in state 'finished'
[2025-12-24 05:19:04] 2025-12-24 13:18:17,459 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-24 05:19:04] 2025-12-24 13:18:17,826 | INFO     | time since job start (5067s) is within the limit (174528.0s)
[2025-12-24 05:19:04] 2025-12-24 13:18:18,836 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-24 05:19:04] 2025-12-24 13:18:18,839 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.9936875000008
[2025-12-24 05:19:04] 2025-12-24 13:18:18,842 | INFO     | using path: /var/lib/multiboinc/boinc143/slots/3/PanDA_Pilot-6937247595/memory_monitor_summary.json (trf name=prmon)
[2025-12-24 05:19:04] 2025-12-24 13:18:18,843 | INFO     | extracted standard info from prmon json
[2025-12-24 05:19:04] 2025-12-24 13:18:18,843 | INFO     | extracted standard memory fields from prmon json
[2025-12-24 05:19:04] 2025-12-24 13:18:18,843 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-24 05:19:04] 2025-12-24 13:18:18,843 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-24 05:19:04] 2025-12-24 13:18:18,843 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-24 05:19:04] 2025-12-24 13:18:18,844 | INFO     | fitting pss+swap vs Time
[2025-12-24 05:19:04] 2025-12-24 13:18:18,844 | INFO     | sum of square deviations: 136095575.0
[2025-12-24 05:19:04] 2025-12-24 13:18:18,844 | INFO     | sum of deviations: -5486340579.500001
[2025-12-24 05:19:04] 2025-12-24 13:18:18,844 | INFO     | mean x: 1766579846.5
[2025-12-24 05:19:04] 2025-12-24 13:18:18,844 | INFO     | mean y: 2748293.9342105263
[2025-12-24 05:19:04] 2025-12-24 13:18:18,844 | INFO     | intersect: 71217838856.42921
[2025-12-24 05:19:04] 2025-12-24 13:18:18,844 | INFO     | chi2: 0.11035490313952617
[2025-12-24 05:19:04] 2025-12-24 13:18:18,844 | INFO     | current memory leak: -40.31 B/s (using 76 data points, chi2=0.11)
[2025-12-24 05:19:04] 2025-12-24 13:18:18,845 | INFO     | could have reported an average CPU frequency of 3999 MHz (6 samples)
[2025-12-24 05:19:04] 2025-12-24 13:18:18,845 | INFO     | ..............................
[2025-12-24 05:19:04] 2025-12-24 13:18:18,845 | INFO     | . Timing measurements:
[2025-12-24 05:19:04] 2025-12-24 13:18:18,845 | INFO     | . get job = 0 s
[2025-12-24 05:19:04] 2025-12-24 13:18:18,845 | INFO     | . initial setup = 5 s
[2025-12-24 05:19:04] 2025-12-24 13:18:18,845 | INFO     | . payload setup = 5 s
[2025-12-24 05:19:04] 2025-12-24 13:18:18,845 | INFO     | . stage-in = 0 s
[2025-12-24 05:19:04] 2025-12-24 13:18:18,845 | INFO     | . payload execution = 5039 s
[2025-12-24 05:19:04] 2025-12-24 13:18:18,845 | INFO     | . stage-out = 0 s
[2025-12-24 05:19:04] 2025-12-24 13:18:18,845 | INFO     | . log creation = 0 s
[2025-12-24 05:19:04] 2025-12-24 13:18:18,845 | INFO     | ..............................
[2025-12-24 05:19:04] 2025-12-24 13:18:18,898 | INFO     | 
[2025-12-24 05:19:04] 2025-12-24 13:18:18,898 | INFO     | job summary report
[2025-12-24 05:19:04] 2025-12-24 13:18:18,898 | INFO     | --------------------------------------------------
[2025-12-24 05:19:04] 2025-12-24 13:18:18,898 | INFO     | PanDA job id: 6937247595
[2025-12-24 05:19:04] 2025-12-24 13:18:18,898 | INFO     | task id: 47898763
[2025-12-24 05:19:04] 2025-12-24 13:18:18,898 | INFO     | errors: (none)
[2025-12-24 05:19:04] 2025-12-24 13:18:18,898 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-24 05:19:04] 2025-12-24 13:18:18,899 | INFO     | pilot state: finished 
[2025-12-24 05:19:04] 2025-12-24 13:18:18,899 | INFO     | transexitcode: 0
[2025-12-24 05:19:04] 2025-12-24 13:18:18,899 | INFO     | exeerrorcode: 0
[2025-12-24 05:19:04] 2025-12-24 13:18:18,899 | INFO     | exeerrordiag: 
[2025-12-24 05:19:04] 2025-12-24 13:18:18,899 | INFO     | exitcode: 0
[2025-12-24 05:19:04] 2025-12-24 13:18:18,899 | INFO     | exitmsg: OK
[2025-12-24 05:19:04] 2025-12-24 13:18:18,899 | INFO     | cpuconsumptiontime: 31263 s
[2025-12-24 05:19:04] 2025-12-24 13:18:18,899 | INFO     | nevents: 400
[2025-12-24 05:19:04] 2025-12-24 13:18:18,899 | INFO     | neventsw: 0
[2025-12-24 05:19:04] 2025-12-24 13:18:18,899 | INFO     | pid: 2146373
[2025-12-24 05:19:04] 2025-12-24 13:18:18,899 | INFO     | pgrp: 2146373
[2025-12-24 05:19:04] 2025-12-24 13:18:18,899 | INFO     | corecount: 12
[2025-12-24 05:19:04] 2025-12-24 13:18:18,899 | INFO     | event service: False
[2025-12-24 05:19:04] 2025-12-24 13:18:18,899 | INFO     | sizes: {0: 2283922, 4: 2284184, 11: 2284212, 5048: 2310618, 5049: 2319700, 5054: 2319838}
[2025-12-24 05:19:04] 2025-12-24 13:18:18,899 | INFO     | --------------------------------------------------
[2025-12-24 05:19:04] 2025-12-24 13:18:18,899 | INFO     | 
[2025-12-24 05:19:04] 2025-12-24 13:18:18,899 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc143/slots/3
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | job 6937247595 has completed (purged errors)
[2025-12-24 05:19:04] 2025-12-24 13:18:18,919 | INFO     | overall cleanup function is called
[2025-12-24 05:19:04] 2025-12-24 13:18:19,927 | INFO     | --- collectZombieJob: --- 10, [2146373]
[2025-12-24 05:19:04] 2025-12-24 13:18:19,927 | INFO     | zombie collector waiting for pid 2146373
[2025-12-24 05:19:04] 2025-12-24 13:18:19,927 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-24 05:19:04] 2025-12-24 13:18:19,927 | INFO     | collected zombie processes
[2025-12-24 05:19:04] 2025-12-24 13:18:19,927 | INFO     | will attempt to kill all subprocesses of pid=2146373
[2025-12-24 05:19:04] 2025-12-24 13:18:20,131 | INFO     | process IDs to be killed: [2146373] (in reverse order)
[2025-12-24 05:19:04] 2025-12-24 13:18:20,225 | WARNING  | found no corresponding commands to process id(s)
[2025-12-24 05:19:04] 2025-12-24 13:18:20,225 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-24 05:19:04] 2025-12-24 13:18:20,229 | INFO     | did not find any defunct processes belonging to 2146373
[2025-12-24 05:19:04] 2025-12-24 13:18:20,233 | INFO     | did not find any defunct processes belonging to 2146373
[2025-12-24 05:19:04] 2025-12-24 13:18:20,233 | INFO     | ready for new job
[2025-12-24 05:19:04] 2025-12-24 13:18:20,233 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-24 05:19:04] 2025-12-24 13:18:20,234 | INFO     | ***************************************
[2025-12-24 05:19:04] 2025-12-24 13:18:20,234 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-24 05:19:04] 2025-12-24 13:18:20,234 | INFO     | ***************************************
[2025-12-24 05:19:04] 2025-12-24 13:18:20,234 | INFO     | 
[2025-12-24 05:19:04] 2025-12-24 13:18:20,235 | INFO     | architecture information:
[2025-12-24 05:19:04] 2025-12-24 13:18:20,236 | INFO     | executing command: cat /etc/os-release
[2025-12-24 05:19:04] 2025-12-24 13:18:20,251 | INFO     | cat /etc/os-release:
[2025-12-24 05:19:04] NAME="CentOS Linux"
[2025-12-24 05:19:04] VERSION="7 (Core)"
[2025-12-24 05:19:04] ID="centos"
[2025-12-24 05:19:04] ID_LIKE="rhel fedora"
[2025-12-24 05:19:04] VERSION_ID="7"
[2025-12-24 05:19:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-24 05:19:04] ANSI_COLOR="0;31"
[2025-12-24 05:19:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-24 05:19:04] HOME_URL="https://www.centos.org/"
[2025-12-24 05:19:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-24 05:19:04] 
[2025-12-24 05:19:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-24 05:19:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-24 05:19:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-24 05:19:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-24 05:19:04] 
[2025-12-24 05:19:04] 2025-12-24 13:18:20,251 | INFO     | ***************************************
[2025-12-24 05:19:04] 2025-12-24 13:18:20,753 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc143/slots/3
[2025-12-24 05:19:04] 2025-12-24 13:18:20,767 | INFO     | sufficient remaining disk space (95440338944 B)
[2025-12-24 05:19:04] 2025-12-24 13:18:20,768 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-24 05:19:04] 2025-12-24 13:18:20,768 | INFO     | current server update state: UPDATING_FINAL
[2025-12-24 05:19:04] 2025-12-24 13:18:20,768 | INFO     | update_server=False
[2025-12-24 05:19:04] 2025-12-24 13:18:20,768 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-24 05:19:04] 2025-12-24 13:18:20,768 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-24 05:19:04] 2025-12-24 13:18:20,768 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-24 05:19:04] 2025-12-24 13:18:20,967 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-24 05:19:04] 2025-12-24 13:18:20,967 | INFO     | aborting loop
[2025-12-24 05:19:04] 2025-12-24 13:18:21,484 | INFO     | all job control threads have been joined
[2025-12-24 05:19:04] 2025-12-24 13:18:21,539 | INFO     | all payload control threads have been joined
[2025-12-24 05:19:04] 2025-12-24 13:18:21,773 | INFO     | [job] queue monitor thread has finished
[2025-12-24 05:19:04] 2025-12-24 13:18:21,773 | INFO     | [job] retrieve thread has finished
[2025-12-24 05:19:04] 2025-12-24 13:18:21,808 | INFO     | all data control threads have been joined
[2025-12-24 05:19:04] 2025-12-24 13:18:21,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-24 05:19:04] 2025-12-24 13:18:21,972 | INFO     | [job] job monitor thread has finished
[2025-12-24 05:19:04] 2025-12-24 13:18:22,145 | INFO     | [data] copytool_in thread has finished
[2025-12-24 05:19:04] 2025-12-24 13:18:22,418 | INFO     | [payload] execute_payloads thread has finished
[2025-12-24 05:19:04] 2025-12-24 13:18:22,489 | INFO     | [job] control thread has finished
[2025-12-24 05:19:04] 2025-12-24 13:18:22,544 | INFO     | [payload] control thread has finished
[2025-12-24 05:19:04] 2025-12-24 13:18:22,749 | INFO     | [job] validate thread has finished
[2025-12-24 05:19:04] 2025-12-24 13:18:22,813 | INFO     | [data] control thread has finished
[2025-12-24 05:19:04] 2025-12-24 13:18:22,912 | INFO     | [job] create_data_payload thread has finished
[2025-12-24 05:19:04] 2025-12-24 13:18:23,007 | INFO     | [payload] validate_pre thread has finished
[2025-12-24 05:19:04] 2025-12-24 13:18:23,085 | INFO     | [payload] validate_post thread has finished
[2025-12-24 05:19:04] 2025-12-24 13:18:23,215 | INFO     | [payload] failed_post thread has finished
[2025-12-24 05:19:04] 2025-12-24 13:18:23,977 | INFO     | [data] copytool_out thread has finished
[2025-12-24 05:19:04] 2025-12-24 13:18:24,773 | INFO     | [data] queue_monitor thread has finished
[2025-12-24 05:19:04] 2025-12-24 13:18:31,131 | INFO     | job.realtimelogging is not enabled
[2025-12-24 05:19:04] 2025-12-24 13:18:32,136 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-24 05:19:04] 2025-12-24 13:18:51,113 | INFO     | PID=2139704 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-24 05:19:04] 2025-12-24 13:18:51,113 | INFO     | .. there are 5 such processes running
[2025-12-24 05:19:04] 2025-12-24 13:18:51,114 | INFO     | found 0 job(s) in 20 queues
[2025-12-24 05:19:04] 2025-12-24 13:18:51,114 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-24 05:19:04] 2025-12-24 13:18:51,114 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-24 05:19:04] 2025-12-24 13:18:58,461 | INFO     | [monitor] cgroup control has ended
[2025-12-24 05:19:04] 2025-12-24 13:18:59,693 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133358909564736)>', '<ExcThread(monitor, started 133357979555584)>']
[2025-12-24 05:19:04] 2025-12-24 13:19:00,162 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-24 05:19:04] 2025-12-24 13:19:00,162 | INFO     | [monitor] control thread has ended
[2025-12-24 05:19:04] 2025-12-24 13:19:04,718 | INFO     | all workflow threads have been joined
[2025-12-24 05:19:04] 2025-12-24 13:19:04,718 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-24 05:19:04] 2025-12-24 13:19:04,718 | INFO     | traces error code: 0
[2025-12-24 05:19:04] 2025-12-24 13:19:04,718 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-24 05:19:04] 2025-12-24 13:19:04,795 [wrapper] ==== pilot stdout END ====
[2025-12-24 05:19:04] 2025-12-24 13:19:04,797 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-24 05:19:04] 2025-12-24 13:19:04,798 [wrapper] pilotpid: 2139704
[2025-12-24 05:19:04] 2025-12-24 13:19:04,800 [wrapper] Pilot exit status: 0
[2025-12-24 05:19:04] 2025-12-24 13:19:04,806 [wrapper] pandaids: 6937247595
[2025-12-24 05:19:04] 2025-12-24 13:19:04,840 [wrapper] cleanup supervisor_pilot 2199476 2139705
[2025-12-24 05:19:04] 2025-12-24 13:19:04,842 [wrapper] Test setup, not cleaning
[2025-12-24 05:19:04] 2025-12-24 13:19:04,843 [wrapper] apfmon messages muted
[2025-12-24 05:19:04] 2025-12-24 13:19:04,845 [wrapper] ==== wrapper stdout END ====
[2025-12-24 05:19:04] 2025-12-24 13:19:04,847 [wrapper] ==== wrapper stderr END ====
[2025-12-24 05:19:04]  *** Error codes and diagnostics ***
[2025-12-24 05:19:04]     "exeErrorCode": 0,
[2025-12-24 05:19:04]     "exeErrorDiag": "",
[2025-12-24 05:19:04]     "pilotErrorCode": 0,
[2025-12-24 05:19:04]     "pilotErrorDiag": "",
[2025-12-24 05:19:04]  *** Listing of results directory ***
[2025-12-24 05:19:04] total 440464
[2025-12-24 05:19:04] -rw-r--r-- 1 root root    579449 Dec 19 16:14 pilot3.tar.gz
[2025-12-24 05:19:04] -rwx------ 1 4871 1028     36322 Dec 19 16:15 runpilot2-wrapper.sh
[2025-12-24 05:19:04] -rw-r--r-- 1 root root      5112 Dec 19 16:18 queuedata.json
[2025-12-24 05:19:04] -rw-r--r-- 1 root root       100 Dec 24 03:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-24 05:19:04] -rwxr-xr-x 1 root root      7986 Dec 24 03:53 run_atlas
[2025-12-24 05:19:04] -rw-r--r-- 1 root root       105 Dec 24 03:53 job.xml
[2025-12-24 05:19:04] -rw-r--r-- 2 root root 225504546 Dec 24 03:53 EVNT.47898761._000922.pool.root.1
[2025-12-24 05:19:04] -rw-r--r-- 2 root root     15847 Dec 24 03:53 start_atlas.sh
[2025-12-24 05:19:04] drwxrwx--x 2 root root      4096 Dec 24 03:53 shared
[2025-12-24 05:19:04] -rw-r--r-- 2 root root    592404 Dec 24 03:53 input.tar.gz
[2025-12-24 05:19:04] -rw-r--r-- 1 root root         0 Dec 24 03:53 boinc_lockfile
[2025-12-24 05:19:04] -rw-r--r-- 1 root root      2508 Dec 24 03:53 pandaJob.out
[2025-12-24 05:19:04] -rw------- 1 root root    987371 Dec 24 03:53 agis_schedconf.cvmfs.json
[2025-12-24 05:19:04] -rw------- 1 root root   1516240 Dec 24 03:53 agis_ddmendpoints.agis.ALL.json
[2025-12-24 05:19:04] drwxr-xr-x 5  320  320      4096 Dec 24 03:53 pilot3
[2025-12-24 05:19:04] -rw-r--r-- 1 root root      7053 Dec 24 04:03 init_data.xml
[2025-12-24 05:19:04] -rw------- 1 root root 219276974 Dec 24 05:17 HITS.47898763._026245.pool.root.1
[2025-12-24 05:19:04] -rw-r--r-- 1 root root       529 Dec 24 05:17 boinc_task_state.xml
[2025-12-24 05:19:04] -rw------- 1 root root      1009 Dec 24 05:18 memory_monitor_summary.json
[2025-12-24 05:19:04] -rw------- 1 root root    409781 Dec 24 05:18 log.47898763._026245.job.log.tgz.1
[2025-12-24 05:19:04] -rw------- 1 root root      7728 Dec 24 05:18 heartbeat.json
[2025-12-24 05:19:04] -rw------- 1 root root        95 Dec 24 05:18 pilot_heartbeat.json
[2025-12-24 05:19:04] -rw-r--r-- 1 root root        27 Dec 24 05:19 wrapper_checkpoint.txt
[2025-12-24 05:19:04] -rw-r--r-- 1 root root      8192 Dec 24 05:19 boinc_mmap_file
[2025-12-24 05:19:04] -rw------- 1 root root      4909 Dec 24 05:19 pilotlog.txt
[2025-12-24 05:19:04] -rw------- 1 root root    761023 Dec 24 05:19 log.47898763._026245.job.log.1
[2025-12-24 05:19:04] -rw------- 1 root root       357 Dec 24 05:19 output.list
[2025-12-24 05:19:04] -rw-r--r-- 1 root root       620 Dec 24 05:19 runtime_log
[2025-12-24 05:19:04] -rw------- 1 root root   1187840 Dec 24 05:19 result.tar.gz
[2025-12-24 05:19:04] -rw-r--r-- 1 root root      9020 Dec 24 05:19 runtime_log.err
[2025-12-24 05:19:04] -rw------- 1 root root       650 Dec 24 05:19 mY6KDmPozq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaAhKDm3bc3wn.diag
[2025-12-24 05:19:04] -rw-r--r-- 1 root root     21726 Dec 24 05:19 stderr.txt
[2025-12-24 05:19:04] HITS file was successfully produced:
[2025-12-24 05:19:04] -rw------- 1 root root 219276974 Dec 24 05:17 shared/HITS.pool.root.1
[2025-12-24 05:19:04]  *** Contents of shared directory: ***
[2025-12-24 05:19:04] total 436124
[2025-12-24 05:19:04] -rw-r--r-- 2 root root 225504546 Dec 24 03:53 ATLAS.root_0
[2025-12-24 05:19:04] -rw-r--r-- 2 root root     15847 Dec 24 03:53 start_atlas.sh
[2025-12-24 05:19:04] -rw-r--r-- 2 root root    592404 Dec 24 03:53 input.tar.gz
[2025-12-24 05:19:04] -rw------- 1 root root 219276974 Dec 24 05:17 HITS.pool.root.1
[2025-12-24 05:19:04] -rw------- 1 root root   1187840 Dec 24 05:19 result.tar.gz
05:19:06 (2135530): run_atlas exited; CPU time 31312.147969
05:19:06 (2135530): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN