Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:58:35 (801753): wrapper (7.7.26015): starting
19:58:35 (801753): wrapper: running run_atlas (--nthreads 4)
[2025-12-21 19:58:35] Arguments: --nthreads 4
[2025-12-21 19:58:35] Threads: 4
[2025-12-21 19:58:35] Checking for CVMFS
[2025-12-21 19:58:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-21 19:58:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-21 19:58:35] Running cvmfs_config stat atlas.cern.ch
[2025-12-21 19:58:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-21 19:58:35] 2.9.2.0 4066 3683 91864 154270 0 57 26501380 36864001 0 130560 0 2149544 99.989 129887 3974 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-21 19:58:35] CVMFS is ok
[2025-12-21 19:58:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-21 19:58:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-21 19:58:35] Further information can be found at the LHC@home message board.
[2025-12-21 19:58:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-21 19:58:35] Checking for apptainer binary...
[2025-12-21 19:58:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-21 19:58:35] Running /usr/bin/apptainer --version
[2025-12-21 19:58:35] apptainer version 1.4.1-1.1
[2025-12-21 19:58:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-21 19:58:35] atlasA237
[2025-12-21 19:58:35] apptainer works
[2025-12-21 19:58:35] Set ATHENA_PROC_NUMBER=4
[2025-12-21 19:58:35] Set ATHENA_CORE_NUMBER=4
[2025-12-21 19:58:35] Starting ATLAS job with PandaID=6935961673
[2025-12-21 19:58:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-21 21:10:55]  *** The last 200 lines of the pilot log: ***
[2025-12-21 21:10:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-21 21:10:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-21 21:10:55] 
[2025-12-21 21:10:55] 2025-12-21 20:09:52,073 | INFO     | ***************************************
[2025-12-21 21:10:55] 2025-12-21 20:09:52,576 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-21 21:10:55] 2025-12-21 20:09:52,593 | INFO     | sufficient remaining disk space (333997670400 B)
[2025-12-21 21:10:55] 2025-12-21 20:09:52,593 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-21 21:10:55] 2025-12-21 20:09:52,593 | INFO     | current server update state: UPDATING_FINAL
[2025-12-21 21:10:55] 2025-12-21 20:09:52,594 | INFO     | update_server=False
[2025-12-21 21:10:55] 2025-12-21 20:09:52,594 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-21 21:10:55] 2025-12-21 20:09:52,594 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-21 21:10:55] 2025-12-21 20:09:52,594 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-21 21:10:55] 2025-12-21 20:09:52,634 | INFO     | all payload control threads have been joined
[2025-12-21 21:10:55] 2025-12-21 20:09:52,744 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-21 21:10:55] 2025-12-21 20:09:52,744 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-21 21:10:55] 2025-12-21 20:09:52,744 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-21 21:10:55] 2025-12-21 20:09:52,745 | INFO     | will abort loop
[2025-12-21 21:10:55] 2025-12-21 20:09:52,804 | INFO     | all job control threads have been joined
[2025-12-21 21:10:55] 2025-12-21 20:09:53,521 | INFO     | all data control threads have been joined
[2025-12-21 21:10:55] 2025-12-21 20:09:53,599 | INFO     | [job] retrieve thread has finished
[2025-12-21 21:10:55] 2025-12-21 20:09:53,600 | INFO     | [job] queue monitor thread has finished
[2025-12-21 21:10:55] 2025-12-21 20:09:53,604 | INFO     | [job] validate thread has finished
[2025-12-21 21:10:55] 2025-12-21 20:09:53,640 | INFO     | [payload] control thread has finished
[2025-12-21 21:10:55] 2025-12-21 20:09:53,682 | INFO     | [job] create_data_payload thread has finished
[2025-12-21 21:10:55] 2025-12-21 20:09:53,750 | INFO     | [job] job monitor thread has finished
[2025-12-21 21:10:55] 2025-12-21 20:09:53,769 | INFO     | [payload] validate_pre thread has finished
[2025-12-21 21:10:55] 2025-12-21 20:09:53,779 | INFO     | [payload] validate_post thread has finished
[2025-12-21 21:10:55] 2025-12-21 20:09:53,810 | INFO     | [job] control thread has finished
[2025-12-21 21:10:55] 2025-12-21 20:09:53,967 | INFO     | [data] copytool_in thread has finished
[2025-12-21 21:10:55] 2025-12-21 20:09:54,061 | INFO     | [payload] execute_payloads thread has finished
[2025-12-21 21:10:55] 2025-12-21 20:09:54,527 | INFO     | [data] control thread has finished
[2025-12-21 21:10:55] 2025-12-21 20:09:54,600 | INFO     | [data] copytool_out thread has finished
[2025-12-21 21:10:55] 2025-12-21 20:09:54,727 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-21 21:10:55] 2025-12-21 20:09:54,841 | INFO     | [payload] failed_post thread has finished
[2025-12-21 21:10:55] 2025-12-21 20:09:55,790 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-21 21:10:55] 2025-12-21 20:09:59,797 | INFO     | [data] queue_monitor thread has finished
[2025-12-21 21:10:55] 2025-12-21 20:10:23,415 | INFO     | PID=805550 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-21 21:10:55] 2025-12-21 20:10:23,415 | INFO     | found 0 job(s) in 20 queues
[2025-12-21 21:10:55] 2025-12-21 20:10:23,415 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-21 21:10:55] 2025-12-21 20:10:23,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-21 21:10:55] 2025-12-21 20:10:48,454 | INFO     | [monitor] cgroup control has ended
[2025-12-21 21:10:55] 2025-12-21 20:10:50,203 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139958592227136)>', '<ExcThread(monitor, started 139957708498688)>']
[2025-12-21 21:10:55] 2025-12-21 20:10:50,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-21 21:10:55] 2025-12-21 20:10:50,561 | INFO     | [monitor] control thread has ended
[2025-12-21 21:10:55] 2025-12-21 20:10:55,228 | INFO     | all workflow threads have been joined
[2025-12-21 21:10:55] 2025-12-21 20:10:55,229 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-21 21:10:55] 2025-12-21 20:10:55,229 | INFO     | traces error code: 0
[2025-12-21 21:10:55] 2025-12-21 20:10:55,229 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-21 21:10:55] 2025-12-21 20:10:55,296 [wrapper] ==== pilot stdout END ====
[2025-12-21 21:10:55] 2025-12-21 20:10:55,299 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-21 21:10:55] 2025-12-21 20:10:55,303 [wrapper] pilotpid: 805550
[2025-12-21 21:10:55] 2025-12-21 20:10:55,307 [wrapper] Pilot exit status: 0
[2025-12-21 21:10:55] 2025-12-21 20:10:55,318 [wrapper] pandaids: 6935961673
[2025-12-21 21:10:55] 2025-12-21 20:10:55,339 [wrapper] cleanup supervisor_pilot  821624 805551
[2025-12-21 21:10:55] 2025-12-21 20:10:55,343 [wrapper] Test setup, not cleaning
[2025-12-21 21:10:55] 2025-12-21 20:10:55,346 [wrapper] apfmon messages muted
[2025-12-21 21:10:55] 2025-12-21 20:10:55,350 [wrapper] ==== wrapper stdout END ====
[2025-12-21 21:10:55] 2025-12-21 20:10:55,353 [wrapper] ==== wrapper stderr END ====
[2025-12-21 21:10:55]  *** Error codes and diagnostics ***
[2025-12-21 21:10:55]     "exeErrorCode": 0,
[2025-12-21 21:10:55]     "exeErrorDiag": "",
[2025-12-21 21:10:55]     "pilotErrorCode": 0,
[2025-12-21 21:10:55]     "pilotErrorDiag": "",
[2025-12-21 21:10:55]  *** Listing of results directory ***
[2025-12-21 21:10:55] total 433124
[2025-12-21 21:10:55] -rw-r--r-- 1 boinc boinc    579449 Dec 19 20:58 pilot3.tar.gz
[2025-12-21 21:10:55] -rwx------ 1 boinc boinc     36322 Dec 19 21:03 runpilot2-wrapper.sh
[2025-12-21 21:10:55] -rw-r--r-- 1 boinc boinc      5112 Dec 19 21:05 queuedata.json
[2025-12-21 21:10:55] -rw-r--r-- 1 boinc boinc       100 Dec 21 19:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-21 21:10:55] -rwxr-xr-x 1 boinc boinc      7986 Dec 21 19:58 run_atlas
[2025-12-21 21:10:55] -rw-r--r-- 1 boinc boinc       105 Dec 21 19:58 job.xml
[2025-12-21 21:10:55] -rw-r--r-- 2 boinc boinc 250227917 Dec 21 19:58 EVNT.47929278._000192.pool.root.1
[2025-12-21 21:10:55] -rw-r--r-- 2 boinc boinc    592416 Dec 21 19:58 input.tar.gz
[2025-12-21 21:10:55] -rw-r--r-- 2 boinc boinc     15847 Dec 21 19:58 start_atlas.sh
[2025-12-21 21:10:55] drwxrwx--x 2 boinc boinc      4096 Dec 21 19:58 shared
[2025-12-21 21:10:55] -rw-r--r-- 1 boinc boinc         0 Dec 21 19:58 boinc_setup_complete
[2025-12-21 21:10:55] -rw-r--r-- 1 boinc boinc      6372 Dec 21 19:58 init_data.xml
[2025-12-21 21:10:55] -rw-r--r-- 1 boinc boinc         0 Dec 21 19:58 boinc_lockfile
[2025-12-21 21:10:55] -rw-r--r-- 1 boinc boinc      2566 Dec 21 19:58 pandaJob.out
[2025-12-21 21:10:55] -rw------- 1 boinc boinc    988196 Dec 21 19:58 agis_schedconf.cvmfs.json
[2025-12-21 21:10:55] -rw------- 1 boinc boinc   1516240 Dec 21 19:58 agis_ddmendpoints.agis.ALL.json
[2025-12-21 21:10:55] drwx------ 5 boinc boinc      4096 Dec 21 19:58 pilot3
[2025-12-21 21:10:55] -rw------- 1 boinc boinc 187607044 Dec 21 21:09 HITS.47929280._004511.pool.root.1
[2025-12-21 21:10:55] -rw-r--r-- 1 boinc boinc       530 Dec 21 21:09 boinc_task_state.xml
[2025-12-21 21:10:55] -rw------- 1 boinc boinc      1016 Dec 21 21:09 memory_monitor_summary.json
[2025-12-21 21:10:55] -rw------- 1 boinc boinc    255021 Dec 21 21:09 log.47929280._004511.job.log.tgz.1
[2025-12-21 21:10:55] -rw------- 1 boinc boinc      7756 Dec 21 21:09 heartbeat.json
[2025-12-21 21:10:55] -rw------- 1 boinc boinc        95 Dec 21 21:10 pilot_heartbeat.json
[2025-12-21 21:10:55] -rw-r--r-- 1 boinc boinc        27 Dec 21 21:10 wrapper_checkpoint.txt
[2025-12-21 21:10:55] -rw-r--r-- 1 boinc boinc      8192 Dec 21 21:10 boinc_mmap_file
[2025-12-21 21:10:55] -rw------- 1 boinc boinc      4937 Dec 21 21:10 pilotlog.txt
[2025-12-21 21:10:55] -rw------- 1 boinc boinc    633613 Dec 21 21:10 log.47929280._004511.job.log.1
[2025-12-21 21:10:55] -rw------- 1 boinc boinc       357 Dec 21 21:10 output.list
[2025-12-21 21:10:55] -rw-r--r-- 1 boinc boinc       620 Dec 21 21:10 runtime_log
[2025-12-21 21:10:55] -rw------- 1 boinc boinc    911360 Dec 21 21:10 result.tar.gz
[2025-12-21 21:10:55] -rw-r--r-- 1 boinc boinc      8912 Dec 21 21:10 runtime_log.err
[2025-12-21 21:10:55] -rw------- 1 boinc boinc       661 Dec 21 21:10 kNeLDm4rvq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlwgKDm3cLwWo.diag
[2025-12-21 21:10:55] -rw-r--r-- 1 boinc boinc      8322 Dec 21 21:10 stderr.txt
[2025-12-21 21:10:55] HITS file was successfully produced:
[2025-12-21 21:10:55] -rw------- 1 boinc boinc 187607044 Dec 21 21:09 shared/HITS.pool.root.1
[2025-12-21 21:10:55]  *** Contents of shared directory: ***
[2025-12-21 21:10:55] total 429072
[2025-12-21 21:10:55] -rw-r--r-- 2 boinc boinc 250227917 Dec 21 19:58 ATLAS.root_0
[2025-12-21 21:10:55] -rw-r--r-- 2 boinc boinc    592416 Dec 21 19:58 input.tar.gz
[2025-12-21 21:10:55] -rw-r--r-- 2 boinc boinc     15847 Dec 21 19:58 start_atlas.sh
[2025-12-21 21:10:55] -rw------- 1 boinc boinc 187607044 Dec 21 21:09 HITS.pool.root.1
[2025-12-21 21:10:55] -rw------- 1 boinc boinc    911360 Dec 21 21:10 result.tar.gz
21:10:56 (801753): run_atlas exited; CPU time 15969.050712
21:10:56 (801753): called boinc_finish(0)

</stderr_txt>
]]>

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