Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:49:10 (3255795): wrapper (7.7.26015): starting
18:49:10 (3255795): wrapper: running run_atlas (--nthreads 3)
[2025-12-21 18:49:10] Arguments: --nthreads 3
[2025-12-21 18:49:10] Threads: 3
[2025-12-21 18:49:10] Checking for CVMFS
[2025-12-21 18:49:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-21 18:49:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-21 18:49:10] Running cvmfs_config stat atlas.cern.ch
[2025-12-21 18:49:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-21 18:49:10] 2.9.2.0 415797 11731 92896 154269 0 81 21557364 36864001 0 130560 0 7297488 99.989 420059 7782 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-21 18:49:10] CVMFS is ok
[2025-12-21 18:49:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-21 18:49:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-21 18:49:10] Further information can be found at the LHC@home message board.
[2025-12-21 18:49:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-21 18:49:10] Checking for apptainer binary...
[2025-12-21 18:49:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-21 18:49:10] Running /usr/bin/apptainer --version
[2025-12-21 18:49:10] apptainer version 1.4.1-1.1
[2025-12-21 18:49:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-21 18:49:10] magicA246a
[2025-12-21 18:49:10] apptainer works
[2025-12-21 18:49:10] Set ATHENA_PROC_NUMBER=3
[2025-12-21 18:49:10] Set ATHENA_CORE_NUMBER=3
[2025-12-21 18:49:10] Starting ATLAS job with PandaID=6938191104
[2025-12-21 18:49:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-22 05:19:02]  *** The last 200 lines of the pilot log: ***
[2025-12-22 05:19:02] NAME="CentOS Linux"
[2025-12-22 05:19:02] VERSION="7 (Core)"
[2025-12-22 05:19:02] ID="centos"
[2025-12-22 05:19:02] ID_LIKE="rhel fedora"
[2025-12-22 05:19:02] VERSION_ID="7"
[2025-12-22 05:19:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-22 05:19:02] ANSI_COLOR="0;31"
[2025-12-22 05:19:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-22 05:19:02] HOME_URL="https://www.centos.org/"
[2025-12-22 05:19:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-22 05:19:02] 
[2025-12-22 05:19:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-22 05:19:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-22 05:19:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-22 05:19:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-22 05:19:02] 
[2025-12-22 05:19:02] 2025-12-22 04:17:58,336 | INFO     | ***************************************
[2025-12-22 05:19:02] 2025-12-22 04:17:58,839 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-22 05:19:02] 2025-12-22 04:17:58,852 | INFO     | sufficient remaining disk space (282294484992 B)
[2025-12-22 05:19:02] 2025-12-22 04:17:58,852 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-22 05:19:02] 2025-12-22 04:17:58,852 | INFO     | current server update state: UPDATING_FINAL
[2025-12-22 05:19:02] 2025-12-22 04:17:58,852 | INFO     | update_server=False
[2025-12-22 05:19:02] 2025-12-22 04:17:58,852 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-22 05:19:02] 2025-12-22 04:17:58,852 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-22 05:19:02] 2025-12-22 04:17:58,852 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-22 05:19:02] 2025-12-22 04:17:58,959 | INFO     | all job control threads have been joined
[2025-12-22 05:19:02] 2025-12-22 04:17:59,329 | INFO     | all data control threads have been joined
[2025-12-22 05:19:02] 2025-12-22 04:17:59,451 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-22 05:19:02] 2025-12-22 04:17:59,736 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-22 05:19:02] 2025-12-22 04:17:59,736 | INFO     | aborting loop
[2025-12-22 05:19:02] 2025-12-22 04:17:59,857 | INFO     | [job] retrieve thread has finished
[2025-12-22 05:19:02] 2025-12-22 04:17:59,857 | INFO     | [job] queue monitor thread has finished
[2025-12-22 05:19:02] 2025-12-22 04:17:59,905 | INFO     | [payload] execute_payloads thread has finished
[2025-12-22 05:19:02] 2025-12-22 04:17:59,924 | INFO     | all payload control threads have been joined
[2025-12-22 05:19:02] 2025-12-22 04:17:59,964 | INFO     | [job] control thread has finished
[2025-12-22 05:19:02] 2025-12-22 04:18:00,335 | INFO     | [data] control thread has finished
[2025-12-22 05:19:02] 2025-12-22 04:18:00,354 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-22 05:19:02] 2025-12-22 04:18:00,439 | INFO     | [payload] validate_post thread has finished
[2025-12-22 05:19:02] 2025-12-22 04:18:00,716 | INFO     | [data] copytool_in thread has finished
[2025-12-22 05:19:02] 2025-12-22 04:18:00,741 | INFO     | [job] job monitor thread has finished
[2025-12-22 05:19:02] 2025-12-22 04:18:00,858 | INFO     | [data] copytool_out thread has finished
[2025-12-22 05:19:02] 2025-12-22 04:18:00,925 | INFO     | [payload] control thread has finished
[2025-12-22 05:19:02] 2025-12-22 04:18:01,236 | INFO     | [payload] validate_pre thread has finished
[2025-12-22 05:19:02] 2025-12-22 04:18:01,266 | INFO     | [job] validate thread has finished
[2025-12-22 05:19:02] 2025-12-22 04:18:01,298 | INFO     | [job] create_data_payload thread has finished
[2025-12-22 05:19:02] 2025-12-22 04:18:01,455 | INFO     | [payload] failed_post thread has finished
[2025-12-22 05:19:02] 2025-12-22 04:18:03,458 | INFO     | [data] queue_monitor thread has finished
[2025-12-22 05:19:02] 2025-12-22 04:18:29,248 | INFO     | PID=3259524 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-22 05:19:02] 2025-12-22 04:18:29,248 | INFO     | found 0 job(s) in 20 queues
[2025-12-22 05:19:02] 2025-12-22 04:18:29,248 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-22 05:19:02] 2025-12-22 04:18:29,248 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-22 05:19:02] 2025-12-22 04:18:55,326 | INFO     | [monitor] cgroup control has ended
[2025-12-22 05:19:02] 2025-12-22 04:18:57,251 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140244605499200)>', '<ExcThread(monitor, started 140244315764480)>']
[2025-12-22 05:19:02] 2025-12-22 04:18:57,386 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-22 05:19:02] 2025-12-22 04:18:57,386 | INFO     | [monitor] control thread has ended
[2025-12-22 05:19:02] 2025-12-22 04:19:02,276 | INFO     | all workflow threads have been joined
[2025-12-22 05:19:02] 2025-12-22 04:19:02,276 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-22 05:19:02] 2025-12-22 04:19:02,277 | INFO     | traces error code: 0
[2025-12-22 05:19:02] 2025-12-22 04:19:02,277 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-22 05:19:02] 2025-12-22 04:19:02,329 [wrapper] ==== pilot stdout END ====
[2025-12-22 05:19:02] 2025-12-22 04:19:02,331 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-22 05:19:02] 2025-12-22 04:19:02,333 [wrapper] pilotpid: 3259524
[2025-12-22 05:19:02] 2025-12-22 04:19:02,336 [wrapper] Pilot exit status: 0
[2025-12-22 05:19:02] 2025-12-22 04:19:02,343 [wrapper] pandaids: 6938191104
[2025-12-22 05:19:02] 2025-12-22 04:19:02,363 [wrapper] cleanup supervisor_pilot 3337265 3259525
[2025-12-22 05:19:02] 2025-12-22 04:19:02,365 [wrapper] Test setup, not cleaning
[2025-12-22 05:19:02] 2025-12-22 04:19:02,367 [wrapper] apfmon messages muted
[2025-12-22 05:19:02] 2025-12-22 04:19:02,370 [wrapper] ==== wrapper stdout END ====
[2025-12-22 05:19:02] 2025-12-22 04:19:02,372 [wrapper] ==== wrapper stderr END ====
[2025-12-22 05:19:02]  *** Error codes and diagnostics ***
[2025-12-22 05:19:02]     "exeErrorCode": 0,
[2025-12-22 05:19:02]     "exeErrorDiag": "",
[2025-12-22 05:19:02]     "pilotErrorCode": 0,
[2025-12-22 05:19:02]     "pilotErrorDiag": "",
[2025-12-22 05:19:02]  *** Listing of results directory ***
[2025-12-22 05:19:02] total 1400768
[2025-12-22 05:19:02] -rwx------ 1 boinc boinc      36322 Dec 20 06:08 runpilot2-wrapper.sh
[2025-12-22 05:19:02] -rw-r--r-- 1 boinc boinc       5112 Dec 20 06:13 queuedata.json
[2025-12-22 05:19:02] -rw-r--r-- 1 boinc boinc     579449 Dec 20 06:13 pilot3.tar.gz
[2025-12-22 05:19:02] -rw-r--r-- 1 boinc boinc        100 Dec 21 18:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-22 05:19:02] -rwxr-xr-x 1 boinc boinc       7986 Dec 21 18:49 run_atlas
[2025-12-22 05:19:02] -rw-r--r-- 1 boinc boinc        105 Dec 21 18:49 job.xml
[2025-12-22 05:19:02] -rw-r--r-- 2 boinc boinc  415350501 Dec 21 18:49 EVNT.47961454._000025.pool.root.1
[2025-12-22 05:19:02] -rw-r--r-- 2 boinc boinc     592606 Dec 21 18:49 input.tar.gz
[2025-12-22 05:19:02] -rw-r--r-- 2 boinc boinc      15847 Dec 21 18:49 start_atlas.sh
[2025-12-22 05:19:02] drwxrwx--x 2 boinc boinc       4096 Dec 21 18:49 shared
[2025-12-22 05:19:02] -rw-r--r-- 1 boinc boinc          0 Dec 21 18:49 boinc_setup_complete
[2025-12-22 05:19:02] -rw-r--r-- 1 boinc boinc       6447 Dec 21 18:49 init_data.xml
[2025-12-22 05:19:02] -rw-r--r-- 1 boinc boinc          0 Dec 21 18:49 boinc_lockfile
[2025-12-22 05:19:02] -rw-r--r-- 1 boinc boinc       2878 Dec 21 18:49 pandaJob.out
[2025-12-22 05:19:02] -rw------- 1 boinc boinc     988204 Dec 21 18:49 agis_schedconf.cvmfs.json
[2025-12-22 05:19:02] drwx------ 5 boinc boinc       4096 Dec 21 18:49 pilot3
[2025-12-22 05:19:02] -rw-r--r-- 1 boinc boinc        533 Dec 22 05:14 boinc_task_state.xml
[2025-12-22 05:19:02] -rw------- 1 boinc boinc 1001980083 Dec 22 05:17 HITS.47961456._000245.pool.root.1
[2025-12-22 05:19:02] -rw------- 1 boinc boinc       1026 Dec 22 05:17 memory_monitor_summary.json
[2025-12-22 05:19:02] -rw------- 1 boinc boinc         95 Dec 22 05:17 pilot_heartbeat.json
[2025-12-22 05:19:02] -rw------- 1 boinc boinc    1516240 Dec 22 05:17 agis_ddmendpoints.agis.ALL.json
[2025-12-22 05:19:02] -rw------- 1 boinc boinc    1278188 Dec 22 05:17 log.47961456._000245.job.log.tgz.1
[2025-12-22 05:19:02] -rw------- 1 boinc boinc       8573 Dec 22 05:17 heartbeat.json
[2025-12-22 05:19:02] -rw-r--r-- 1 boinc boinc       8192 Dec 22 05:18 boinc_mmap_file
[2025-12-22 05:19:02] -rw-r--r-- 1 boinc boinc         29 Dec 22 05:18 wrapper_checkpoint.txt
[2025-12-22 05:19:02] -rw------- 1 boinc boinc       4752 Dec 22 05:19 pilotlog.txt
[2025-12-22 05:19:02] -rw------- 1 boinc boinc    5293556 Dec 22 05:19 log.47961456._000245.job.log.1
[2025-12-22 05:19:02] -rw------- 1 boinc boinc        353 Dec 22 05:19 output.list
[2025-12-22 05:19:02] -rw-r--r-- 1 boinc boinc        620 Dec 22 05:19 runtime_log
[2025-12-22 05:19:02] -rw------- 1 boinc boinc    6594560 Dec 22 05:19 result.tar.gz
[2025-12-22 05:19:02] -rw-r--r-- 1 boinc boinc       8918 Dec 22 05:19 runtime_log.err
[2025-12-22 05:19:02] -rw------- 1 boinc boinc        670 Dec 22 05:19 1jgMDmAO4q8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1kcKDm2wjcPo.diag
[2025-12-22 05:19:02] -rw-r--r-- 1 boinc boinc       8711 Dec 22 05:19 stderr.txt
[2025-12-22 05:19:02] HITS file was successfully produced:
[2025-12-22 05:19:02] -rw------- 1 boinc boinc 1001980083 Dec 22 05:17 shared/HITS.pool.root.1
[2025-12-22 05:19:02]  *** Contents of shared directory: ***
[2025-12-22 05:19:02] total 1391160
[2025-12-22 05:19:02] -rw-r--r-- 2 boinc boinc  415350501 Dec 21 18:49 ATLAS.root_0
[2025-12-22 05:19:02] -rw-r--r-- 2 boinc boinc     592606 Dec 21 18:49 input.tar.gz
[2025-12-22 05:19:02] -rw-r--r-- 2 boinc boinc      15847 Dec 21 18:49 start_atlas.sh
[2025-12-22 05:19:02] -rw------- 1 boinc boinc 1001980083 Dec 22 05:17 HITS.pool.root.1
[2025-12-22 05:19:02] -rw------- 1 boinc boinc    6594560 Dec 22 05:19 result.tar.gz
05:19:03 (3255795): run_atlas exited; CPU time 111965.263887
05:19:03 (3255795): called boinc_finish(0)

</stderr_txt>
]]>

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