Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:07:17 (3176084): wrapper (7.7.26015): starting
07:07:17 (3176084): wrapper: running run_atlas (--nthreads 12)
[2025-12-20 07:07:17] Arguments: --nthreads 12
[2025-12-20 07:07:17] Threads: 12
[2025-12-20 07:07:17] Checking for CVMFS
[2025-12-20 07:07:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-20 07:07:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-20 07:07:17] Running cvmfs_config stat atlas.cern.ch
[2025-12-20 07:07:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-20 07:07:18] 2.11.5.0 2587603 27910 363728 154228 0 451 45385437 45568001 8651 130560 0 195340747 99.756 134252960 19973 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-20 07:07:18] CVMFS is ok
[2025-12-20 07:07:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-20 07:07:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-20 07:07:18] Further information can be found at the LHC@home message board.
[2025-12-20 07:07:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-20 07:07:18] Checking for apptainer binary...
[2025-12-20 07:07:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-20 07:07:18] Running /usr/bin/apptainer --version
[2025-12-20 07:07:18] apptainer version 1.4.1-1.el9
[2025-12-20 07:07:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-20 07:07:18] wns0056.triumf.lcg
[2025-12-20 07:07:18] apptainer works
[2025-12-20 07:07:18] Set ATHENA_PROC_NUMBER=12
[2025-12-20 07:07:18] Set ATHENA_CORE_NUMBER=12
[2025-12-20 07:07:18] Starting ATLAS job with PandaID=6937835016
[2025-12-20 07:07:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-20 07:11:32]  *** The last 200 lines of the pilot log: ***
[2025-12-20 07:11:32] 2025-12-20 15:10:35,875 | WARNING  | found no stored workdir sizes
[2025-12-20 07:11:32] 2025-12-20 15:10:35,875 | INFO     | will not add max space = 0 B to job metrics
[2025-12-20 07:11:32] 2025-12-20 15:10:35,875 | WARNING  | wrong length of table data, x=[1766243268.0], y=[1065.0] (must be same and length>=4)
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | could have reported an average CPU frequency of 2636 MHz (4 samples)
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | ..............................
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . Timing measurements:
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . get job = 0 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . initial setup = 2 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . payload setup = 4 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . stage-in = 0 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . payload execution = 45 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . stage-out = 0 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . log creation = 0 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,877 | INFO     | ..............................
[2025-12-20 07:11:32] 2025-12-20 15:10:35,877 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-20 07:11:32] 2025-12-20 15:10:35,877 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6937835016/pilotlog.txt
[2025-12-20 07:11:32] 2025-12-20 15:10:35,886 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-20 07:11:32] - Log from pilotlog.txt -
[2025-12-20 07:11:32] 2025-12-20 15:10:35,874 | INFO     | extracted standard memory fields from prmon json
[2025-12-20 07:11:32] 2025-12-20 15:10:35,874 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-20 07:11:32] 2025-12-20 15:10:35,875 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-20 07:11:32] 2025-12-20 15:10:35,875 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-20 07:11:32] 2025-12-20 15:10:35,875 | WARNING  | found no stored workdir sizes
[2025-12-20 07:11:32] 2025-12-20 15:10:35,875 | INFO     | will not add max space = 0 B to job metrics
[2025-12-20 07:11:32] 2025-12-20 15:10:35,875 | WARNING  | wrong length of table data, x=[1766243268.0], y=[1065.0] (must be same and length>=4)
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | could have reported an average CPU frequency of 2636 MHz (4 samples)
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | ..............................
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . Timing measurements:
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . get job = 0 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . initial setup = 2 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . payload setup = 4 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . stage-in = 0 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . payload execution = 45 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . stage-out = 0 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . log creation = 0 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,877 | INFO     | ..............................
[2025-12-20 07:11:32] 2025-12-20 15:10:35,877 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-20 07:11:32] 2025-12-20 15:10:35,877 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6937835016/pilotlog.txt
[2025-12-20 07:11:32] 2025-12-20 15:10:35,886 | WARNING  | 
[2025-12-20 07:11:32] [begin log extracts]
[2025-12-20 07:11:32] - Log from pilotlog.txt -
[2025-12-20 07:11:32] 2025-12-20 15:10:35,874 | INFO     | extracted standard memory fields from prmon json
[2025-12-20 07:11:32] 2025-12-20 15:10:35,874 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-20 07:11:32] 2025-12-20 15:10:35,875 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-20 07:11:32] 2025-12-20 15:10:35,875 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-20 07:11:32] 2025-12-20 15:10:35,875 | WARNING  | found no stored workdir sizes
[2025-12-20 07:11:32] 2025-12-20 15:10:35,875 | INFO     | will not add max space = 0 B to job metrics
[2025-12-20 07:11:32] 2025-12-20 15:10:35,875 | WARNING  | wrong length of table data, x=[1766243268.0], y=[1065.0] (must be same and length>=4)
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | could have reported an average CPU frequency of 2636 MHz (4 samples)
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | ..............................
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . Timing measurements:
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . get job = 0 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . initial setup = 2 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . payload setup = 4 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . stage-in = 0 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . payload execution = 45 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . stage-out = 0 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,876 | INFO     | . log creation = 0 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,877 | INFO     | ..............................
[2025-12-20 07:11:32] 2025-12-20 15:10:35,877 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-20 07:11:32] 2025-12-20 15:10:35,877 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6937835016/pilotlog.txt
[2025-12-20 07:11:32] [end log extracts]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,887 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-12-20 07:11:32] 2025-12-20 15:10:35,887 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-20 07:11:32] 2025-12-20 15:10:35,943 | INFO     | 
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | job summary report
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | --------------------------------------------------
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | PanDA job id: 6937835016
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | task id: 47961022
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-20 07:08:26,535 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | error 2/2: 1165: Local output file is missing
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | pilot state: failed 
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | transexitcode: 65
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | exeerrorcode: 65
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | exitcode: 65
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | cpuconsumptiontime: 40 s
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | nevents: 0
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | neventsw: 0
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | pid: 3186215
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | pgrp: 3186215
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | corecount: 12
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | event service: False
[2025-12-20 07:11:32] 2025-12-20 15:10:35,944 | INFO     | sizes: {0: 2284377, 1: 2284576, 4: 2284838, 11: 2284866, 53: 2310319, 55: 2314609, 56: 2314765, 176: 2314931}
[2025-12-20 07:11:32] 2025-12-20 15:10:35,945 | INFO     | --------------------------------------------------
[2025-12-20 07:11:32] 2025-12-20 15:10:35,945 | INFO     | 
[2025-12-20 07:11:32] 2025-12-20 15:10:35,945 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-20 07:11:32] 2025-12-20 15:10:35,958 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,959 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,959 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,959 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,959 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,959 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,959 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,959 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,959 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,959 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,959 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,959 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,959 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,959 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,959 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,959 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,959 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,959 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-20 07:11:32] 2025-12-20 15:10:35,959 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,959 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-20 07:11:32] 2025-12-20 15:10:35,960 | INFO     | job 6937835016 has completed (purged errors)
[2025-12-20 07:11:32] 2025-12-20 15:10:35,960 | INFO     | overall cleanup function is called
[2025-12-20 07:11:32] 2025-12-20 15:10:36,966 | INFO     | --- collectZombieJob: --- 10, [3186215]
[2025-12-20 07:11:32] 2025-12-20 15:10:36,967 | INFO     | zombie collector waiting for pid 3186215
[2025-12-20 07:11:32] 2025-12-20 15:10:36,967 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-20 07:11:32] 2025-12-20 15:10:36,967 | INFO     | collected zombie processes
[2025-12-20 07:11:32] 2025-12-20 15:10:36,967 | INFO     | will attempt to kill all subprocesses of pid=3186215
[2025-12-20 07:11:32] 2025-12-20 15:10:37,082 | INFO     | process IDs to be killed: [3186215] (in reverse order)
[2025-12-20 07:11:32] 2025-12-20 15:10:37,129 | WARNING  | found no corresponding commands to process id(s)
[2025-12-20 07:11:32] 2025-12-20 15:10:37,129 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-20 07:11:32] 2025-12-20 15:10:37,134 | INFO     | did not find any defunct processes belonging to 3186215
[2025-12-20 07:11:32] 2025-12-20 15:10:37,138 | INFO     | did not find any defunct processes belonging to 3186215
[2025-12-20 07:11:32] 2025-12-20 15:10:37,139 | INFO     | ready for new job
[2025-12-20 07:11:32] 2025-12-20 15:10:37,139 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-20 07:11:32] 2025-12-20 15:10:37,140 | INFO     | ***************************************
[2025-12-20 07:11:32] 2025-12-20 15:10:37,140 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-20 07:11:32] 2025-12-20 15:10:37,141 | INFO     | ***************************************
[2025-12-20 07:11:32] 2025-12-20 15:10:37,141 | INFO     | 
[2025-12-20 07:11:32] 2025-12-20 15:10:37,142 | INFO     | architecture information:
[2025-12-20 07:11:32] 2025-12-20 15:10:37,143 | INFO     | executing command: cat /etc/os-release
[2025-12-20 07:11:32] 2025-12-20 15:10:37,154 | INFO     | cat /etc/os-release:
[2025-12-20 07:11:32] NAME="CentOS Linux"
[2025-12-20 07:11:32] VERSION="7 (Core)"
[2025-12-20 07:11:32] ID="centos"
[2025-12-20 07:11:32] ID_LIKE="rhel fedora"
[2025-12-20 07:11:32] VERSION_ID="7"
[2025-12-20 07:11:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-20 07:11:32] ANSI_COLOR="0;31"
[2025-12-20 07:11:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-20 07:11:32] HOME_URL="https://www.centos.org/"
[2025-12-20 07:11:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-20 07:11:32] 
[2025-12-20 07:11:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-20 07:11:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-20 07:11:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-20 07:11:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-20 07:11:32] 
[2025-12-20 07:11:32] 2025-12-20 15:10:37,155 | INFO     | ***************************************
[2025-12-20 07:11:32] 2025-12-20 15:10:37,657 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-20 07:11:32] 2025-12-20 15:10:37,669 | INFO     | sufficient remaining disk space (2060215910400 B)
[2025-12-20 07:11:32] 2025-12-20 15:10:37,669 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-20 07:11:32] 2025-12-20 15:10:37,669 | INFO     | current server update state: UPDATING_FINAL
[2025-12-20 07:11:32] 2025-12-20 15:10:37,669 | INFO     | update_server=False
[2025-12-20 07:11:32] 2025-12-20 15:10:37,669 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-20 07:11:32] 2025-12-20 15:10:37,669 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-20 07:11:32] 2025-12-20 15:10:37,678 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-20 07:11:32] 2025-12-20 15:10:37,679 | INFO     | aborting loop
[2025-12-20 07:11:32] 2025-12-20 15:10:38,032 | INFO     | all data control threads have been joined
[2025-12-20 07:11:32] 2025-12-20 15:10:38,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-20 07:11:32] 2025-12-20 15:10:38,606 | INFO     | all payload control threads have been joined
[2025-12-20 07:11:32] 2025-12-20 15:10:38,670 | INFO     | [job] retrieve thread has finished
[2025-12-20 07:11:32] 2025-12-20 15:10:38,674 | INFO     | [job] queue monitor thread has finished
[2025-12-20 07:11:32] 2025-12-20 15:10:38,683 | INFO     | [job] job monitor thread has finished
[2025-12-20 07:11:32] 2025-12-20 15:10:38,694 | INFO     | [data] copytool_in thread has finished
[2025-12-20 07:11:32] 2025-12-20 15:10:38,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-20 07:11:32] 2025-12-20 15:10:38,906 | INFO     | all job control threads have been joined
[2025-12-20 07:11:32] 2025-12-20 15:10:39,038 | INFO     | [data] control thread has finished
[2025-12-20 07:11:32] 2025-12-20 15:10:39,088 | INFO     | [payload] validate_post thread has finished
[2025-12-20 07:11:32] 2025-12-20 15:10:39,092 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-20 07:11:32] 2025-12-20 15:10:39,107 | INFO     | [payload] execute_payloads thread has finished
[2025-12-20 07:11:32] 2025-12-20 15:10:39,611 | INFO     | [payload] control thread has finished
[2025-12-20 07:11:32] 2025-12-20 15:10:39,622 | INFO     | [payload] failed_post thread has finished
[2025-12-20 07:11:32] 2025-12-20 15:10:39,674 | INFO     | [job] validate thread has finished
[2025-12-20 07:11:32] 2025-12-20 15:10:39,847 | INFO     | [job] create_data_payload thread has finished
[2025-12-20 07:11:32] 2025-12-20 15:10:39,911 | INFO     | [job] control thread has finished
[2025-12-20 07:11:32] 2025-12-20 15:10:39,933 | INFO     | [payload] validate_pre thread has finished
[2025-12-20 07:11:32] 2025-12-20 15:10:40,217 | INFO     | [data] copytool_out thread has finished
[2025-12-20 07:11:32] 2025-12-20 15:10:42,864 | INFO     | [data] queue_monitor thread has finished
[2025-12-20 07:11:32] 2025-12-20 15:11:07,608 | INFO     | PID=3179727 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-20 07:11:32] 2025-12-20 15:11:07,608 | INFO     | .. there are 8 such processes running
[2025-12-20 07:11:32] 2025-12-20 15:11:07,608 | INFO     | found 0 job(s) in 20 queues
[2025-12-20 07:11:32] 2025-12-20 15:11:07,608 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-20 07:11:32] 2025-12-20 15:11:07,608 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-20 07:11:32] 2025-12-20 15:11:26,045 | INFO     | [monitor] cgroup control has ended
[2025-12-20 07:11:32] 2025-12-20 15:11:26,853 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140181815719744)>', '<ExcThread(monitor, started 140180602214144)>']
[2025-12-20 07:11:32] 2025-12-20 15:11:27,704 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-20 07:11:32] 2025-12-20 15:11:27,705 | INFO     | [monitor] control thread has ended
[2025-12-20 07:11:32] 2025-12-20 15:11:31,878 | INFO     | all workflow threads have been joined
[2025-12-20 07:11:32] 2025-12-20 15:11:31,879 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-20 07:11:32] 2025-12-20 15:11:31,879 | INFO     | traces error code: 0
[2025-12-20 07:11:32] 2025-12-20 15:11:31,879 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-20 07:11:32] 2025-12-20 15:11:32,015 [wrapper] ==== pilot stdout END ====
[2025-12-20 07:11:32] 2025-12-20 15:11:32,017 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-20 07:11:32] 2025-12-20 15:11:32,019 [wrapper] pilotpid: 3179727
[2025-12-20 07:11:32] 2025-12-20 15:11:32,021 [wrapper] Pilot exit status: 0
[2025-12-20 07:11:32] 2025-12-20 15:11:32,027 [wrapper] pandaids: 6937835016
[2025-12-20 07:11:32] 2025-12-20 15:11:32,059 [wrapper] cleanup supervisor_pilot 3179733 3179728
[2025-12-20 07:11:32] 2025-12-20 15:11:32,065 [wrapper] Test setup, not cleaning
[2025-12-20 07:11:32] 2025-12-20 15:11:32,067 [wrapper] apfmon messages muted
[2025-12-20 07:11:32] 2025-12-20 15:11:32,069 [wrapper] ==== wrapper stdout END ====
[2025-12-20 07:11:32] 2025-12-20 15:11:32,070 [wrapper] ==== wrapper stderr END ====
[2025-12-20 07:11:32]  *** Error codes and diagnostics ***
[2025-12-20 07:11:32]     "exeErrorCode": 65,
[2025-12-20 07:11:32]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-12-20 07:11:32]     "pilotErrorCode": 1305,
[2025-12-20 07:11:32]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-12-20 07:11:32]  *** Listing of results directory ***
[2025-12-20 07:11:32] total 410292
[2025-12-20 07:11:32] -rw-r--r--. 1 boinc boinc    579449 Dec 19 21:05 pilot3.tar.gz
[2025-12-20 07:11:32] -rwx------. 1 boinc boinc     36322 Dec 19 21:07 runpilot2-wrapper.sh
[2025-12-20 07:11:32] -rw-r--r--. 1 boinc boinc      5112 Dec 19 21:09 queuedata.json
[2025-12-20 07:11:32] -rw-r--r--. 1 boinc boinc       100 Dec 20 07:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-20 07:11:32] -rwxr-xr-x. 1 boinc boinc      7986 Dec 20 07:07 run_atlas
[2025-12-20 07:11:32] -rw-r--r--. 1 boinc boinc       105 Dec 20 07:07 job.xml
[2025-12-20 07:11:32] -rw-r--r--. 1 boinc boinc      6595 Dec 20 07:07 init_data.xml
[2025-12-20 07:11:32] -rw-r--r--. 2 boinc boinc 415956918 Dec 20 07:07 EVNT.47961014._000042.pool.root.1
[2025-12-20 07:11:32] -rw-r--r--. 2 boinc boinc     15847 Dec 20 07:07 start_atlas.sh
[2025-12-20 07:11:32] drwxrwx--x. 2 boinc boinc      4096 Dec 20 07:07 shared
[2025-12-20 07:11:32] -rw-r--r--. 2 boinc boinc    592607 Dec 20 07:07 input.tar.gz
[2025-12-20 07:11:32] -rw-r--r--. 1 boinc boinc         0 Dec 20 07:07 boinc_lockfile
[2025-12-20 07:11:32] -rw-r--r--. 1 boinc boinc      2877 Dec 20 07:07 pandaJob.out
[2025-12-20 07:11:32] -rw-------. 1 boinc boinc    988154 Dec 20 07:07 agis_schedconf.cvmfs.json
[2025-12-20 07:11:32] -rw-------. 1 boinc boinc   1516240 Dec 20 07:07 agis_ddmendpoints.agis.ALL.json
[2025-12-20 07:11:32] drwx------. 5 boinc boinc      4096 Dec 20 07:07 pilot3
[2025-12-20 07:11:32] -rw-r--r--. 1 boinc boinc       523 Dec 20 07:08 boinc_task_state.xml
[2025-12-20 07:11:32] -rw-------. 1 boinc boinc       946 Dec 20 07:08 memory_monitor_summary.json
[2025-12-20 07:11:32] -rw-------. 1 boinc boinc     47020 Dec 20 07:08 log.47961022._000414.job.log.tgz.1
[2025-12-20 07:11:32] -rw-------. 1 boinc boinc        95 Dec 20 07:10 pilot_heartbeat.json
[2025-12-20 07:11:32] -rw-------. 1 boinc boinc     10308 Dec 20 07:10 heartbeat.json
[2025-12-20 07:11:32] -rw-r--r--. 1 boinc boinc        23 Dec 20 07:11 wrapper_checkpoint.txt
[2025-12-20 07:11:32] -rw-------. 1 boinc boinc      4822 Dec 20 07:11 pilotlog.txt
[2025-12-20 07:11:32] -rw-r--r--. 1 boinc boinc      8192 Dec 20 07:11 boinc_mmap_file
[2025-12-20 07:11:32] -rw-------. 1 boinc boinc     88041 Dec 20 07:11 log.47961022._000414.job.log.1
[2025-12-20 07:11:32] -rw-------. 1 boinc boinc       186 Dec 20 07:11 output.list
[2025-12-20 07:11:32] -rw-r--r--. 1 boinc boinc       620 Dec 20 07:11 runtime_log
[2025-12-20 07:11:32] -rw-------. 1 boinc boinc    153600 Dec 20 07:11 result.tar.gz
[2025-12-20 07:11:32] -rw-r--r--. 1 boinc boinc      8636 Dec 20 07:11 runtime_log.err
[2025-12-20 07:11:32] -rw-------. 1 boinc boinc       645 Dec 20 07:11 qbOKDmQM4q8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTecKDmzYw1Jn.diag
[2025-12-20 07:11:32] -rw-r--r--. 1 boinc boinc     22140 Dec 20 07:11 stderr.txt
[2025-12-20 07:11:32] No HITS result produced
[2025-12-20 07:11:32]  *** Contents of shared directory: ***
[2025-12-20 07:11:32] total 406960
[2025-12-20 07:11:32] -rw-r--r--. 2 boinc boinc 415956918 Dec 20 07:07 ATLAS.root_0
[2025-12-20 07:11:32] -rw-r--r--. 2 boinc boinc     15847 Dec 20 07:07 start_atlas.sh
[2025-12-20 07:11:32] -rw-r--r--. 2 boinc boinc    592607 Dec 20 07:07 input.tar.gz
[2025-12-20 07:11:32] -rw-------. 1 boinc boinc    153600 Dec 20 07:11 result.tar.gz
07:11:33 (3176084): run_atlas exited; CPU time 38.723664
07:11:33 (3176084): called boinc_finish(0)

</stderr_txt>
]]>

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