Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:47:02 (1341187): wrapper (7.7.26015): starting
01:47:02 (1341187): wrapper: running run_atlas (--nthreads 12)
[2025-12-20 01:47:02] Arguments: --nthreads 12
[2025-12-20 01:47:02] Threads: 12
[2025-12-20 01:47:02] Checking for CVMFS
[2025-12-20 01:47:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-20 01:47:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-20 01:47:02] Running cvmfs_config stat atlas.cern.ch
[2025-12-20 01:47:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-20 01:47:02] 2.11.5.0 3590583 62741 390204 154220 3 433 31910188 45568001 10216 130560 0 537791025 99.790 331435436 23461 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-12-20 01:47:02] CVMFS is ok
[2025-12-20 01:47:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-20 01:47:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-20 01:47:02] Further information can be found at the LHC@home message board.
[2025-12-20 01:47:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-20 01:47:02] Checking for apptainer binary...
[2025-12-20 01:47:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-20 01:47:02] Running /usr/bin/apptainer --version
[2025-12-20 01:47:02] apptainer version 1.4.1-1.el9
[2025-12-20 01:47:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-20 01:47:03] wns0047.triumf.lcg
[2025-12-20 01:47:03] apptainer works
[2025-12-20 01:47:03] Set ATHENA_PROC_NUMBER=12
[2025-12-20 01:47:03] Set ATHENA_CORE_NUMBER=12
[2025-12-20 01:47:03] Starting ATLAS job with PandaID=6937251610
[2025-12-20 01:47:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-20 01:54:25]  *** The last 200 lines of the pilot log: ***
[2025-12-20 01:54:25] 2025-12-20 09:53:44,393 | WARNING  | wrong length of table data, x=[1766224090.0, 1766224151.0, 1766224212.0, 1766224273.0], y=[1878.0, 634480.0, 503057.0, 793881.0] (must be same and length>=4)
[2025-12-20 01:54:25] 2025-12-20 09:53:44,393 | INFO     | could have reported an average CPU frequency of 2697 MHz (4 samples)
[2025-12-20 01:54:25] 2025-12-20 09:53:44,393 | INFO     | ..............................
[2025-12-20 01:54:25] 2025-12-20 09:53:44,393 | INFO     | . Timing measurements:
[2025-12-20 01:54:25] 2025-12-20 09:53:44,393 | INFO     | . get job = 0 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,393 | INFO     | . initial setup = 3 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | . payload setup = 10 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | . stage-in = 0 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | . payload execution = 204 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | . stage-out = 0 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | . log creation = 0 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | ..............................
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6937251610/pilotlog.txt
[2025-12-20 01:54:25] 2025-12-20 09:53:44,405 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-20 01:54:25] - Log from pilotlog.txt -
[2025-12-20 01:54:25] 2025-12-20 09:53:44,391 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6937251610/memory_monitor_summary.json (trf name=prmon)
[2025-12-20 01:54:25] 2025-12-20 09:53:44,392 | INFO     | extracted standard info from prmon json
[2025-12-20 01:54:25] 2025-12-20 09:53:44,392 | INFO     | extracted standard memory fields from prmon json
[2025-12-20 01:54:25] 2025-12-20 09:53:44,392 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-20 01:54:25] 2025-12-20 09:53:44,392 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-20 01:54:25] 2025-12-20 09:53:44,392 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-20 01:54:25] 2025-12-20 09:53:44,393 | WARNING  | wrong length of table data, x=[1766224090.0, 1766224151.0, 1766224212.0, 1766224273.0], y=[1878.0, 634480.0, 503057.0, 793881.0] (must be same and length>=4)
[2025-12-20 01:54:25] 2025-12-20 09:53:44,393 | INFO     | could have reported an average CPU frequency of 2697 MHz (4 samples)
[2025-12-20 01:54:25] 2025-12-20 09:53:44,393 | INFO     | ..............................
[2025-12-20 01:54:25] 2025-12-20 09:53:44,393 | INFO     | . Timing measurements:
[2025-12-20 01:54:25] 2025-12-20 09:53:44,393 | INFO     | . get job = 0 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,393 | INFO     | . initial setup = 3 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | . payload setup = 10 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | . stage-in = 0 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | . payload execution = 204 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | . stage-out = 0 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | . log creation = 0 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | ..............................
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6937251610/pilotlog.txt
[2025-12-20 01:54:25] 2025-12-20 09:53:44,405 | WARNING  | 
[2025-12-20 01:54:25] [begin log extracts]
[2025-12-20 01:54:25] - Log from pilotlog.txt -
[2025-12-20 01:54:25] 2025-12-20 09:53:44,391 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6937251610/memory_monitor_summary.json (trf name=prmon)
[2025-12-20 01:54:25] 2025-12-20 09:53:44,392 | INFO     | extracted standard info from prmon json
[2025-12-20 01:54:25] 2025-12-20 09:53:44,392 | INFO     | extracted standard memory fields from prmon json
[2025-12-20 01:54:25] 2025-12-20 09:53:44,392 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-20 01:54:25] 2025-12-20 09:53:44,392 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-20 01:54:25] 2025-12-20 09:53:44,392 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-20 01:54:25] 2025-12-20 09:53:44,393 | WARNING  | wrong length of table data, x=[1766224090.0, 1766224151.0, 1766224212.0, 1766224273.0], y=[1878.0, 634480.0, 503057.0, 793881.0] (must be same and length>=4)
[2025-12-20 01:54:25] 2025-12-20 09:53:44,393 | INFO     | could have reported an average CPU frequency of 2697 MHz (4 samples)
[2025-12-20 01:54:25] 2025-12-20 09:53:44,393 | INFO     | ..............................
[2025-12-20 01:54:25] 2025-12-20 09:53:44,393 | INFO     | . Timing measurements:
[2025-12-20 01:54:25] 2025-12-20 09:53:44,393 | INFO     | . get job = 0 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,393 | INFO     | . initial setup = 3 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | . payload setup = 10 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | . stage-in = 0 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | . payload execution = 204 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | . stage-out = 0 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | . log creation = 0 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | ..............................
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-20 01:54:25] 2025-12-20 09:53:44,394 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6937251610/pilotlog.txt
[2025-12-20 01:54:25] [end log extracts]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,406 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-12-20 01:54:25] 2025-12-20 09:53:44,406 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-20 01:54:25] 2025-12-20 09:53:44,774 | INFO     | 
[2025-12-20 01:54:25] 2025-12-20 09:53:44,774 | INFO     | job summary report
[2025-12-20 01:54:25] 2025-12-20 09:53:44,774 | INFO     | --------------------------------------------------
[2025-12-20 01:54:25] 2025-12-20 09:53:44,774 | INFO     | PanDA job id: 6937251610
[2025-12-20 01:54:25] 2025-12-20 09:53:44,774 | INFO     | task id: 47960988
[2025-12-20 01:54:25] 2025-12-20 09:53:44,774 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-20 01:51:16,724 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-20 01:54:25] 2025-12-20 09:53:44,774 | INFO     | error 2/2: 1165: Local output file is missing
[2025-12-20 01:54:25] 2025-12-20 09:53:44,774 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-20 01:54:25] 2025-12-20 09:53:44,774 | INFO     | pilot state: failed 
[2025-12-20 01:54:25] 2025-12-20 09:53:44,774 | INFO     | transexitcode: 65
[2025-12-20 01:54:25] 2025-12-20 09:53:44,775 | INFO     | exeerrorcode: 65
[2025-12-20 01:54:25] 2025-12-20 09:53:44,775 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-12-20 01:54:25] 2025-12-20 09:53:44,775 | INFO     | exitcode: 65
[2025-12-20 01:54:25] 2025-12-20 09:53:44,775 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-12-20 01:54:25] 2025-12-20 09:53:44,775 | INFO     | cpuconsumptiontime: 44 s
[2025-12-20 01:54:25] 2025-12-20 09:53:44,775 | INFO     | nevents: 0
[2025-12-20 01:54:25] 2025-12-20 09:53:44,775 | INFO     | neventsw: 0
[2025-12-20 01:54:25] 2025-12-20 09:53:44,775 | INFO     | pid: 1351452
[2025-12-20 01:54:25] 2025-12-20 09:53:44,775 | INFO     | pgrp: 1351452
[2025-12-20 01:54:25] 2025-12-20 09:53:44,775 | INFO     | corecount: 12
[2025-12-20 01:54:25] 2025-12-20 09:53:44,775 | INFO     | event service: False
[2025-12-20 01:54:25] 2025-12-20 09:53:44,775 | INFO     | sizes: {0: 2284597, 11: 2284597, 12: 2284887, 22: 2284915, 220: 2310508, 221: 2310484, 222: 2314930, 225: 2314958, 355: 2315124}
[2025-12-20 01:54:25] 2025-12-20 09:53:44,775 | INFO     | --------------------------------------------------
[2025-12-20 01:54:25] 2025-12-20 09:53:44,775 | INFO     | 
[2025-12-20 01:54:25] 2025-12-20 09:53:44,775 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-20 01:54:25] 2025-12-20 09:53:44,910 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,911 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,911 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,911 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,911 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,911 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,911 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,911 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,911 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,911 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,911 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,911 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,911 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,911 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,911 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,911 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,911 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,911 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-20 01:54:25] 2025-12-20 09:53:44,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,911 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-20 01:54:25] 2025-12-20 09:53:44,912 | INFO     | job 6937251610 has completed (purged errors)
[2025-12-20 01:54:25] 2025-12-20 09:53:44,912 | INFO     | overall cleanup function is called
[2025-12-20 01:54:25] 2025-12-20 09:53:45,967 | INFO     | --- collectZombieJob: --- 10, [1351452]
[2025-12-20 01:54:25] 2025-12-20 09:53:45,967 | INFO     | zombie collector waiting for pid 1351452
[2025-12-20 01:54:25] 2025-12-20 09:53:45,967 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-20 01:54:25] 2025-12-20 09:53:45,967 | INFO     | collected zombie processes
[2025-12-20 01:54:25] 2025-12-20 09:53:45,967 | INFO     | will attempt to kill all subprocesses of pid=1351452
[2025-12-20 01:54:25] 2025-12-20 09:53:46,850 | INFO     | PID=1344870 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-20 01:54:25] 2025-12-20 09:53:46,850 | INFO     | .. there are 14 such processes running
[2025-12-20 01:54:25] 2025-12-20 09:53:47,120 | INFO     | process IDs to be killed: [1351452] (in reverse order)
[2025-12-20 01:54:25] 2025-12-20 09:53:47,713 | WARNING  | found no corresponding commands to process id(s)
[2025-12-20 01:54:25] 2025-12-20 09:53:47,713 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-20 01:54:25] 2025-12-20 09:53:47,745 | INFO     | did not find any defunct processes belonging to 1351452
[2025-12-20 01:54:25] 2025-12-20 09:53:47,779 | INFO     | did not find any defunct processes belonging to 1351452
[2025-12-20 01:54:25] 2025-12-20 09:53:47,780 | INFO     | ready for new job
[2025-12-20 01:54:25] 2025-12-20 09:53:47,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-20 01:54:25] 2025-12-20 09:53:47,824 | INFO     | ***************************************
[2025-12-20 01:54:25] 2025-12-20 09:53:47,824 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-20 01:54:25] 2025-12-20 09:53:47,824 | INFO     | ***************************************
[2025-12-20 01:54:25] 2025-12-20 09:53:47,824 | INFO     | 
[2025-12-20 01:54:25] 2025-12-20 09:53:47,826 | INFO     | architecture information:
[2025-12-20 01:54:25] 2025-12-20 09:53:47,826 | INFO     | executing command: cat /etc/os-release
[2025-12-20 01:54:25] 2025-12-20 09:53:47,837 | INFO     | cat /etc/os-release:
[2025-12-20 01:54:25] NAME="CentOS Linux"
[2025-12-20 01:54:25] VERSION="7 (Core)"
[2025-12-20 01:54:25] ID="centos"
[2025-12-20 01:54:25] ID_LIKE="rhel fedora"
[2025-12-20 01:54:25] VERSION_ID="7"
[2025-12-20 01:54:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-20 01:54:25] ANSI_COLOR="0;31"
[2025-12-20 01:54:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-20 01:54:25] HOME_URL="https://www.centos.org/"
[2025-12-20 01:54:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-20 01:54:25] 
[2025-12-20 01:54:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-20 01:54:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-20 01:54:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-20 01:54:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-20 01:54:25] 
[2025-12-20 01:54:25] 2025-12-20 09:53:47,837 | INFO     | ***************************************
[2025-12-20 01:54:25] 2025-12-20 09:53:48,340 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-20 01:54:25] 2025-12-20 09:53:48,381 | INFO     | sufficient remaining disk space (2129797316608 B)
[2025-12-20 01:54:25] 2025-12-20 09:53:48,382 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-20 01:54:25] 2025-12-20 09:53:48,382 | INFO     | current server update state: UPDATING_FINAL
[2025-12-20 01:54:25] 2025-12-20 09:53:48,382 | INFO     | update_server=False
[2025-12-20 01:54:25] 2025-12-20 09:53:48,382 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-20 01:54:25] 2025-12-20 09:53:48,383 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-20 01:54:25] 2025-12-20 09:53:48,383 | INFO     | aborting loop
[2025-12-20 01:54:25] 2025-12-20 09:53:48,697 | INFO     | all data control threads have been joined
[2025-12-20 01:54:25] 2025-12-20 09:53:48,966 | INFO     | all payload control threads have been joined
[2025-12-20 01:54:25] 2025-12-20 09:53:49,388 | INFO     | [job] retrieve thread has finished
[2025-12-20 01:54:25] 2025-12-20 09:53:49,389 | INFO     | [job] job monitor thread has finished
[2025-12-20 01:54:25] 2025-12-20 09:53:49,479 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-20 01:54:25] 2025-12-20 09:53:49,644 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-20 01:54:25] 2025-12-20 09:53:49,674 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-20 01:54:25] 2025-12-20 09:53:49,703 | INFO     | [data] control thread has finished
[2025-12-20 01:54:25] 2025-12-20 09:53:49,717 | INFO     | [payload] validate_post thread has finished
[2025-12-20 01:54:25] 2025-12-20 09:53:49,803 | INFO     | all job control threads have been joined
[2025-12-20 01:54:25] 2025-12-20 09:53:49,829 | INFO     | [payload] execute_payloads thread has finished
[2025-12-20 01:54:25] 2025-12-20 09:53:49,833 | INFO     | [data] copytool_in thread has finished
[2025-12-20 01:54:25] 2025-12-20 09:53:49,972 | INFO     | [payload] control thread has finished
[2025-12-20 01:54:25] 2025-12-20 09:53:50,354 | INFO     | [job] validate thread has finished
[2025-12-20 01:54:25] 2025-12-20 09:53:50,364 | INFO     | [job] create_data_payload thread has finished
[2025-12-20 01:54:25] 2025-12-20 09:53:50,485 | INFO     | [job] queue monitor thread has finished
[2025-12-20 01:54:25] 2025-12-20 09:53:50,539 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-20 01:54:25] 2025-12-20 09:53:50,572 | INFO     | [payload] failed_post thread has finished
[2025-12-20 01:54:25] 2025-12-20 09:53:50,673 | INFO     | [payload] validate_pre thread has finished
[2025-12-20 01:54:25] 2025-12-20 09:53:50,809 | INFO     | [job] control thread has finished
[2025-12-20 01:54:25] 2025-12-20 09:53:51,651 | INFO     | [data] copytool_out thread has finished
[2025-12-20 01:54:25] 2025-12-20 09:53:54,548 | INFO     | [data] queue_monitor thread has finished
[2025-12-20 01:54:25] 2025-12-20 09:54:18,673 | INFO     | [monitor] cgroup control has ended
[2025-12-20 01:54:25] 2025-12-20 09:54:19,523 | INFO     | PID=1344870 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-20 01:54:25] 2025-12-20 09:54:19,523 | INFO     | .. there are 14 such processes running
[2025-12-20 01:54:25] 2025-12-20 09:54:19,523 | INFO     | found 0 job(s) in 20 queues
[2025-12-20 01:54:25] 2025-12-20 09:54:19,524 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-20 01:54:25] 2025-12-20 09:54:19,524 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-20 01:54:25] 2025-12-20 09:54:19,681 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139986520921920)>', '<ExcThread(monitor, started 139985952937728)>']
[2025-12-20 01:54:25] 2025-12-20 09:54:20,539 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-20 01:54:25] 2025-12-20 09:54:20,539 | INFO     | [monitor] control thread has ended
[2025-12-20 01:54:25] 2025-12-20 09:54:24,707 | INFO     | all workflow threads have been joined
[2025-12-20 01:54:25] 2025-12-20 09:54:24,707 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-20 01:54:25] 2025-12-20 09:54:24,707 | INFO     | traces error code: 0
[2025-12-20 01:54:25] 2025-12-20 09:54:24,707 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-20 01:54:25] 2025-12-20 09:54:24,827 [wrapper] ==== pilot stdout END ====
[2025-12-20 01:54:25] 2025-12-20 09:54:24,835 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-20 01:54:25] 2025-12-20 09:54:24,837 [wrapper] pilotpid: 1344870
[2025-12-20 01:54:25] 2025-12-20 09:54:24,838 [wrapper] Pilot exit status: 0
[2025-12-20 01:54:25] 2025-12-20 09:54:24,847 [wrapper] pandaids: 6937251610
[2025-12-20 01:54:25] 2025-12-20 09:54:24,882 [wrapper] cleanup supervisor_pilot 1344876 1344871
[2025-12-20 01:54:25] 2025-12-20 09:54:24,884 [wrapper] Test setup, not cleaning
[2025-12-20 01:54:25] 2025-12-20 09:54:24,890 [wrapper] apfmon messages muted
[2025-12-20 01:54:25] 2025-12-20 09:54:24,922 [wrapper] ==== wrapper stdout END ====
[2025-12-20 01:54:25] 2025-12-20 09:54:24,944 [wrapper] ==== wrapper stderr END ====
[2025-12-20 01:54:25]  *** Error codes and diagnostics ***
[2025-12-20 01:54:25]     "exeErrorCode": 65,
[2025-12-20 01:54:25]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-12-20 01:54:25]     "pilotErrorCode": 1305,
[2025-12-20 01:54:25]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-12-20 01:54:25]  *** Listing of results directory ***
[2025-12-20 01:54:25] total 407448
[2025-12-20 01:54:25] -rw-r--r--. 1 boinc boinc    579449 Dec 19 16:14 pilot3.tar.gz
[2025-12-20 01:54:25] -rwx------. 1 boinc boinc     36322 Dec 19 16:16 runpilot2-wrapper.sh
[2025-12-20 01:54:25] -rw-r--r--. 1 boinc boinc      5112 Dec 19 16:20 queuedata.json
[2025-12-20 01:54:25] -rw-r--r--. 1 boinc boinc       100 Dec 20 01:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-20 01:54:25] -rwxr-xr-x. 1 boinc boinc      7986 Dec 20 01:47 run_atlas
[2025-12-20 01:54:25] -rw-r--r--. 1 boinc boinc       105 Dec 20 01:47 job.xml
[2025-12-20 01:54:25] -rw-r--r--. 1 boinc boinc      6596 Dec 20 01:47 init_data.xml
[2025-12-20 01:54:25] -rw-r--r--. 2 boinc boinc 412986048 Dec 20 01:47 EVNT.47960986._000105.pool.root.1
[2025-12-20 01:54:25] -rw-r--r--. 2 boinc boinc     15847 Dec 20 01:47 start_atlas.sh
[2025-12-20 01:54:25] drwxrwx--x. 2 boinc boinc      4096 Dec 20 01:47 shared
[2025-12-20 01:54:25] -rw-r--r--. 2 boinc boinc    592607 Dec 20 01:47 input.tar.gz
[2025-12-20 01:54:25] -rw-r--r--. 1 boinc boinc         0 Dec 20 01:47 boinc_lockfile
[2025-12-20 01:54:25] -rw-r--r--. 1 boinc boinc      2876 Dec 20 01:47 pandaJob.out
[2025-12-20 01:54:25] -rw-------. 1 boinc boinc    988138 Dec 20 01:47 agis_schedconf.cvmfs.json
[2025-12-20 01:54:25] -rw-------. 1 boinc boinc   1516240 Dec 20 01:47 agis_ddmendpoints.agis.ALL.json
[2025-12-20 01:54:25] drwx------. 5 boinc boinc      4096 Dec 20 01:47 pilot3
[2025-12-20 01:54:25] -rw-r--r--. 1 boinc boinc       524 Dec 20 01:51 boinc_task_state.xml
[2025-12-20 01:54:25] -rw-------. 1 boinc boinc       995 Dec 20 01:51 memory_monitor_summary.json
[2025-12-20 01:54:25] -rw-------. 1 boinc boinc     50732 Dec 20 01:51 log.47960988._000547.job.log.tgz.1
[2025-12-20 01:54:25] -rw-------. 1 boinc boinc        95 Dec 20 01:53 pilot_heartbeat.json
[2025-12-20 01:54:25] -rw-------. 1 boinc boinc     10337 Dec 20 01:53 heartbeat.json
[2025-12-20 01:54:25] -rw-r--r--. 1 boinc boinc      8192 Dec 20 01:54 boinc_mmap_file
[2025-12-20 01:54:25] -rw-r--r--. 1 boinc boinc        23 Dec 20 01:54 wrapper_checkpoint.txt
[2025-12-20 01:54:25] -rw-------. 1 boinc boinc      4823 Dec 20 01:54 pilotlog.txt
[2025-12-20 01:54:25] -rw-------. 1 boinc boinc    113124 Dec 20 01:54 log.47960988._000547.job.log.1
[2025-12-20 01:54:25] -rw-------. 1 boinc boinc       186 Dec 20 01:54 output.list
[2025-12-20 01:54:25] -rw-r--r--. 1 boinc boinc       620 Dec 20 01:54 runtime_log
[2025-12-20 01:54:25] -rw-------. 1 boinc boinc    184320 Dec 20 01:54 result.tar.gz
[2025-12-20 01:54:25] -rw-r--r--. 1 boinc boinc      8636 Dec 20 01:54 runtime_log.err
[2025-12-20 01:54:25] -rw-------. 1 boinc boinc       644 Dec 20 01:54 Bf7MDmNpzq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlQcKDmILHk4n.diag
[2025-12-20 01:54:25] -rw-r--r--. 1 boinc boinc     22644 Dec 20 01:54 stderr.txt
[2025-12-20 01:54:25] No HITS result produced
[2025-12-20 01:54:25]  *** Contents of shared directory: ***
[2025-12-20 01:54:25] total 404088
[2025-12-20 01:54:25] -rw-r--r--. 2 boinc boinc 412986048 Dec 20 01:47 ATLAS.root_0
[2025-12-20 01:54:25] -rw-r--r--. 2 boinc boinc     15847 Dec 20 01:47 start_atlas.sh
[2025-12-20 01:54:25] -rw-r--r--. 2 boinc boinc    592607 Dec 20 01:47 input.tar.gz
[2025-12-20 01:54:25] -rw-------. 1 boinc boinc    184320 Dec 20 01:54 result.tar.gz
01:54:26 (1341187): run_atlas exited; CPU time 47.521265
01:54:26 (1341187): called boinc_finish(0)

</stderr_txt>
]]>

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