Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:20:00 (3087931): wrapper (7.7.26015): starting
22:20:00 (3087931): wrapper: running run_atlas (--nthreads 3)
[2025-12-20 22:20:00] Arguments: --nthreads 3
[2025-12-20 22:20:00] Threads: 3
[2025-12-20 22:20:00] Checking for CVMFS
[2025-12-20 22:20:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-20 22:20:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-20 22:20:00] Running cvmfs_config stat atlas.cern.ch
[2025-12-20 22:20:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-20 22:20:00] 2.9.2.0 415797 10502 91824 154238 3 56 21382388 36864001 0 130560 0 6876632 99.990 373947 7194 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-20 22:20:00] CVMFS is ok
[2025-12-20 22:20:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-20 22:20:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-20 22:20:00] Further information can be found at the LHC@home message board.
[2025-12-20 22:20:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-20 22:20:00] Checking for apptainer binary...
[2025-12-20 22:20:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-20 22:20:00] Running /usr/bin/apptainer --version
[2025-12-20 22:20:00] apptainer version 1.4.1-1.1
[2025-12-20 22:20:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-20 22:20:00] magicA246a
[2025-12-20 22:20:00] apptainer works
[2025-12-20 22:20:00] Set ATHENA_PROC_NUMBER=3
[2025-12-20 22:20:00] Set ATHENA_CORE_NUMBER=3
[2025-12-20 22:20:00] Starting ATLAS job with PandaID=6937249854
[2025-12-20 22:20:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-21 08:27:55]  *** The last 200 lines of the pilot log: ***
[2025-12-21 08:27:55] 2025-12-21 07:27:27,085 | INFO     | [payload] execute_payloads thread has finished
[2025-12-21 08:27:55] 2025-12-21 07:27:27,300 | INFO     | [payload] failed_post thread has finished
[2025-12-21 08:27:55] 2025-12-21 07:27:27,301 | INFO     | [data] control thread has finished
[2025-12-21 08:27:55] 2025-12-21 07:27:27,787 | INFO     | [payload] validate_post thread has finished
[2025-12-21 08:27:55] 2025-12-21 07:27:27,814 | INFO     | [data] copytool_in thread has finished
[2025-12-21 08:27:55] 2025-12-21 07:27:27,817 | INFO     | [job] create_data_payload thread has finished
[2025-12-21 08:27:55] 2025-12-21 07:27:27,824 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-21 08:27:55] 2025-12-21 07:27:27,888 | INFO     | [job] validate thread has finished
[2025-12-21 08:27:55] 2025-12-21 07:27:27,981 | INFO     | [payload] control thread has finished
[2025-12-21 08:27:55] 2025-12-21 07:27:28,089 | INFO     | [job] control thread has finished
[2025-12-21 08:27:55] 2025-12-21 07:27:28,201 | INFO     | [payload] validate_pre thread has finished
[2025-12-21 08:27:55] 2025-12-21 07:27:28,260 | INFO     | [data] copytool_out thread has finished
[2025-12-21 08:27:55] 2025-12-21 07:27:29,952 | INFO     | [data] queue_monitor thread has finished
[2025-12-21 08:27:55] 2025-12-21 07:27:45,250 | INFO     | [monitor] cgroup control has ended
[2025-12-21 08:27:55] 2025-12-21 07:27:46,774 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140493397018432)>', '<ExcThread(monitor, started 140493035906816)>']
[2025-12-21 08:27:55] 2025-12-21 07:27:51,800 | INFO     | all workflow threads have been joined
[2025-12-21 08:27:55] 2025-12-21 07:27:51,800 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-21 08:27:55] 2025-12-21 07:27:51,800 | INFO     | traces error code: 0
[2025-12-21 08:27:55] 2025-12-21 07:27:51,800 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-21 08:27:55] 2025-12-21 07:27:55,732 | INFO     | PID=3091671 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-21 08:27:55] 2025-12-21 07:27:55,733 | INFO     | found 0 job(s) in 20 queues
[2025-12-21 08:27:55] 2025-12-21 07:27:55,733 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-21 08:27:55] 2025-12-21 07:27:55,733 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-21 08:27:55] 2025-12-21 07:27:55,733 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-21 08:27:55] 2025-12-21 07:27:55,733 | CRITICAL | thread 'MainThread' is not alive
[2025-12-21 08:27:55] 2025-12-21 07:27:55,733 | INFO     | [monitor] control thread has ended
[2025-12-21 08:27:55] 2025-12-21 07:27:55,784 [wrapper] ==== pilot stdout END ====
[2025-12-21 08:27:55] 2025-12-21 07:27:55,787 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-21 08:27:55] 2025-12-21 07:27:55,789 [wrapper] pilotpid: 3091671
[2025-12-21 08:27:55] 2025-12-21 07:27:55,791 [wrapper] Pilot exit status: 0
[2025-12-21 08:27:55] 2025-12-21 07:27:55,799 [wrapper] pandaids: 6937249854
[2025-12-21 08:27:55] 2025-12-21 07:27:55,818 [wrapper] cleanup supervisor_pilot 3166202 3091672
[2025-12-21 08:27:55] 2025-12-21 07:27:55,820 [wrapper] Test setup, not cleaning
[2025-12-21 08:27:55] 2025-12-21 07:27:55,822 [wrapper] apfmon messages muted
[2025-12-21 08:27:55] 2025-12-21 07:27:55,824 [wrapper] ==== wrapper stdout END ====
[2025-12-21 08:27:55] 2025-12-21 07:27:55,826 [wrapper] ==== wrapper stderr END ====
[2025-12-21 08:27:55]  *** Error codes and diagnostics ***
[2025-12-21 08:27:55]     "exeErrorCode": 0,
[2025-12-21 08:27:55]     "exeErrorDiag": "",
[2025-12-21 08:27:55]     "pilotErrorCode": 0,
[2025-12-21 08:27:55]     "pilotErrorDiag": "",
[2025-12-21 08:27:55]  *** Listing of results directory ***
[2025-12-21 08:27:55] total 1376264
[2025-12-21 08:27:55] -rw-r--r-- 1 boinc boinc    579449 Dec 20 01:14 pilot3.tar.gz
[2025-12-21 08:27:55] -rwx------ 1 boinc boinc     36322 Dec 20 01:16 runpilot2-wrapper.sh
[2025-12-21 08:27:55] -rw-r--r-- 1 boinc boinc      5112 Dec 20 01:18 queuedata.json
[2025-12-21 08:27:55] -rw-r--r-- 1 boinc boinc       100 Dec 20 22:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-21 08:27:55] -rwxr-xr-x 1 boinc boinc      7986 Dec 20 22:20 run_atlas
[2025-12-21 08:27:55] -rw-r--r-- 1 boinc boinc       105 Dec 20 22:20 job.xml
[2025-12-21 08:27:55] -rw-r--r-- 2 boinc boinc 413503905 Dec 20 22:20 EVNT.47960986._000097.pool.root.1
[2025-12-21 08:27:55] -rw-r--r-- 2 boinc boinc    592594 Dec 20 22:20 input.tar.gz
[2025-12-21 08:27:55] -rw-r--r-- 2 boinc boinc     15847 Dec 20 22:20 start_atlas.sh
[2025-12-21 08:27:55] drwxrwx--x 2 boinc boinc      4096 Dec 20 22:20 shared
[2025-12-21 08:27:55] -rw-r--r-- 1 boinc boinc         0 Dec 20 22:20 boinc_setup_complete
[2025-12-21 08:27:55] -rw-r--r-- 1 boinc boinc      6447 Dec 20 22:20 init_data.xml
[2025-12-21 08:27:55] -rw-r--r-- 1 boinc boinc         0 Dec 20 22:20 boinc_lockfile
[2025-12-21 08:27:55] -rw-r--r-- 1 boinc boinc      2876 Dec 20 22:20 pandaJob.out
[2025-12-21 08:27:55] -rw------- 1 boinc boinc    988154 Dec 20 22:20 agis_schedconf.cvmfs.json
[2025-12-21 08:27:55] drwx------ 5 boinc boinc      4096 Dec 20 22:20 pilot3
[2025-12-21 08:27:55] -rw-r--r-- 1 boinc boinc       532 Dec 21 08:24 boinc_task_state.xml
[2025-12-21 08:27:55] -rw------- 1 boinc boinc 979120137 Dec 21 08:26 HITS.47960988._000469.pool.root.1
[2025-12-21 08:27:55] -rw------- 1 boinc boinc      1026 Dec 21 08:27 memory_monitor_summary.json
[2025-12-21 08:27:55] -rw------- 1 boinc boinc   1516240 Dec 21 08:27 agis_ddmendpoints.agis.ALL.json
[2025-12-21 08:27:55] -rw------- 1 boinc boinc   1266474 Dec 21 08:27 log.47960988._000469.job.log.tgz.1
[2025-12-21 08:27:55] -rw------- 1 boinc boinc      8568 Dec 21 08:27 heartbeat.json
[2025-12-21 08:27:55] -rw-r--r-- 1 boinc boinc      8192 Dec 21 08:27 boinc_mmap_file
[2025-12-21 08:27:55] -rw-r--r-- 1 boinc boinc        29 Dec 21 08:27 wrapper_checkpoint.txt
[2025-12-21 08:27:55] -rw------- 1 boinc boinc       817 Dec 21 08:27 pilotlog.txt
[2025-12-21 08:27:55] -rw------- 1 boinc boinc        95 Dec 21 08:27 pilot_heartbeat.json
[2025-12-21 08:27:55] -rw------- 1 boinc boinc   5116252 Dec 21 08:27 log.47960988._000469.job.log.1
[2025-12-21 08:27:55] -rw------- 1 boinc boinc       353 Dec 21 08:27 output.list
[2025-12-21 08:27:55] -rw-r--r-- 1 boinc boinc       620 Dec 21 08:27 runtime_log
[2025-12-21 08:27:55] -rw------- 1 boinc boinc   6400000 Dec 21 08:27 result.tar.gz
[2025-12-21 08:27:55] -rw-r--r-- 1 boinc boinc      8918 Dec 21 08:27 runtime_log.err
[2025-12-21 08:27:55] -rw------- 1 boinc boinc       670 Dec 21 08:27 PCmKDmOpzq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoEhKDmYTUwgn.diag
[2025-12-21 08:27:55] -rw-r--r-- 1 boinc boinc      6105 Dec 21 08:27 stderr.txt
[2025-12-21 08:27:55] HITS file was successfully produced:
[2025-12-21 08:27:55] -rw------- 1 boinc boinc 979120137 Dec 21 08:26 shared/HITS.pool.root.1
[2025-12-21 08:27:55]  *** Contents of shared directory: ***
[2025-12-21 08:27:55] total 1366848
[2025-12-21 08:27:55] -rw-r--r-- 2 boinc boinc 413503905 Dec 20 22:20 ATLAS.root_0
[2025-12-21 08:27:55] -rw-r--r-- 2 boinc boinc    592594 Dec 20 22:20 input.tar.gz
[2025-12-21 08:27:55] -rw-r--r-- 2 boinc boinc     15847 Dec 20 22:20 start_atlas.sh
[2025-12-21 08:27:55] -rw------- 1 boinc boinc 979120137 Dec 21 08:26 HITS.pool.root.1
[2025-12-21 08:27:55] -rw------- 1 boinc boinc   6400000 Dec 21 08:27 result.tar.gz
08:27:57 (3087931): run_atlas exited; CPU time 108177.331190
08:27:57 (3087931): called boinc_finish(0)

</stderr_txt>
]]>

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