Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:52:55 (23866): wrapper (7.7.26015): starting
01:52:55 (23866): wrapper: running run_atlas (--nthreads 12)
[2025-12-20 01:52:55] Arguments: --nthreads 12
[2025-12-20 01:52:55] Threads: 12
[2025-12-20 01:52:55] Checking for CVMFS
[2025-12-20 01:52:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-20 01:52:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-20 01:52:55] Running cvmfs_config stat atlas.cern.ch
[2025-12-20 01:52:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-20 01:52:56] 2.11.2.0 2981 321860 94268 154216 3 57 15825145 20275200 1 130560 1 146022452 99.962 19134612 15396 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-20 01:52:56] CVMFS is ok
[2025-12-20 01:52:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-20 01:52:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-20 01:52:56] Further information can be found at the LHC@home message board.
[2025-12-20 01:52:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-20 01:52:56] Checking for apptainer binary...
[2025-12-20 01:52:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-20 01:52:56] Running /usr/bin/apptainer --version
[2025-12-20 01:52:56] apptainer version 1.3.2-1.el7
[2025-12-20 01:52:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-20 01:52:57] c-205-30.aglt2.org
[2025-12-20 01:52:57] apptainer works
[2025-12-20 01:52:57] Set ATHENA_PROC_NUMBER=12
[2025-12-20 01:52:57] Set ATHENA_CORE_NUMBER=12
[2025-12-20 01:52:57] Starting ATLAS job with PandaID=6935103128
[2025-12-20 01:52:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-20 03:07:32]  *** The last 200 lines of the pilot log: ***
[2025-12-20 03:07:32]  lfn=log.47929280._002152.job.log.tgz.1
[2025-12-20 03:07:32]  mtime=0
[2025-12-20 03:07:32]  protocol_id=None
[2025-12-20 03:07:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-20 03:07:32]  replicas=None
[2025-12-20 03:07:32]  scope=mc23_13p6TeV
[2025-12-20 03:07:32]  status=None
[2025-12-20 03:07:32]  status_code=0
[2025-12-20 03:07:32]  storage_token=
[2025-12-20 03:07:32]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6935103128/log.47929280._002152.job.log.tgz.1
[2025-12-20 03:07:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c0/29/log.47929280._002152.job.log.tgz.1
[2025-12-20 03:07:32]  workdir=None
[2025-12-20 03:07:32] ]
[2025-12-20 03:07:32] 2025-12-20 08:06:53,264 | INFO     | transferring file log.47929280._002152.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6935103128/log.47929280._002152.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-20 03:07:32] 2025-12-20 08:06:53,265 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6935103128/log.47929280._002152.job.log.tgz.1 /tmp/boinchome/slots/0/log.47929280._002152.job
[2025-12-20 03:07:32] 2025-12-20 08:06:53,286 | INFO     | adding to output.list: log.47929280._002152.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c0/29/log.47929280._002152.job.log.tg
[2025-12-20 03:07:32] 2025-12-20 08:06:53,287 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-20 03:07:32] 2025-12-20 08:06:53,287 | INFO     | summary of transferred files:
[2025-12-20 03:07:32] 2025-12-20 08:06:53,287 | INFO     |  -- lfn=log.47929280._002152.job.log.tgz.1, status_code=0, status=transferred
[2025-12-20 03:07:32] 2025-12-20 08:06:53,287 | INFO     | stage-out finished correctly
[2025-12-20 03:07:32] 2025-12-20 08:06:54,247 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-20 03:07:32] 2025-12-20 08:06:54,561 | INFO     | monitor loop #330: job 0:6935103128 is in state 'finished'
[2025-12-20 03:07:32] 2025-12-20 08:06:54,561 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-20 03:07:32] 2025-12-20 08:06:54,744 | INFO     | job 6935103128 has state=finished
[2025-12-20 03:07:32] 2025-12-20 08:06:54,744 | INFO     | preparing for final server update for job 6935103128 in state='finished'
[2025-12-20 03:07:32] 2025-12-20 08:06:54,744 | INFO     | this job has now completed (state=finished)
[2025-12-20 03:07:32] 2025-12-20 08:06:54,745 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-20 03:07:32] 2025-12-20 08:06:54,745 | INFO     | log transfer has been attempted: DONE
[2025-12-20 03:07:32] 2025-12-20 08:06:54,745 | INFO     | job 6935103128 has finished - writing final server update
[2025-12-20 03:07:32] 2025-12-20 08:06:54,745 | INFO     | total number of processed events: 400 (read)
[2025-12-20 03:07:32] 2025-12-20 08:06:54,746 | INFO     | executing command: lscpu
[2025-12-20 03:07:32] 2025-12-20 08:06:54,773 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-20 03:07:32] 2025-12-20 08:06:54,911 | INFO     | time since job start (4422s) is within the limit (174528.0s)
[2025-12-20 03:07:32] 2025-12-20 08:06:56,916 | INFO     | time since job start (4424s) is within the limit (174528.0s)
[2025-12-20 03:07:32] 2025-12-20 08:06:57,064 | INFO     | monitor loop #331: job 0:6935103128 is in state 'finished'
[2025-12-20 03:07:32] 2025-12-20 08:06:57,064 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-20 03:07:32] 2025-12-20 08:06:58,921 | INFO     | time since job start (4426s) is within the limit (174528.0s)
[2025-12-20 03:07:32] 2025-12-20 08:06:59,457 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-20 03:07:32] 2025-12-20 08:06:59,461 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-12-20 03:07:32] 2025-12-20 08:06:59,463 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6935103128/memory_monitor_summary.json (trf name=prmon)
[2025-12-20 03:07:32] 2025-12-20 08:06:59,464 | INFO     | extracted standard info from prmon json
[2025-12-20 03:07:32] 2025-12-20 08:06:59,464 | INFO     | extracted standard memory fields from prmon json
[2025-12-20 03:07:32] 2025-12-20 08:06:59,464 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-20 03:07:32] 2025-12-20 08:06:59,464 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-20 03:07:32] 2025-12-20 08:06:59,465 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-20 03:07:32] 2025-12-20 08:06:59,466 | INFO     | fitting pss+swap vs Time
[2025-12-20 03:07:32] 2025-12-20 08:06:59,467 | INFO     | sum of square deviations: 85136480.0
[2025-12-20 03:07:32] 2025-12-20 08:06:59,467 | INFO     | sum of deviations: -2484349623.0000005
[2025-12-20 03:07:32] 2025-12-20 08:06:59,467 | INFO     | mean x: 1766215878.0
[2025-12-20 03:07:32] 2025-12-20 08:06:59,467 | INFO     | mean y: 2732935.5384615385
[2025-12-20 03:07:32] 2025-12-20 08:06:59,468 | INFO     | intersect: 51542305051.344925
[2025-12-20 03:07:32] 2025-12-20 08:06:59,468 | INFO     | chi2: 0.06807419642973819
[2025-12-20 03:07:32] 2025-12-20 08:06:59,468 | INFO     | current memory leak: -29.18 B/s (using 65 data points, chi2=0.07)
[2025-12-20 03:07:32] 2025-12-20 08:06:59,468 | INFO     | could have reported an average CPU frequency of 2030 MHz (6 samples)
[2025-12-20 03:07:32] 2025-12-20 08:06:59,469 | INFO     | ..............................
[2025-12-20 03:07:32] 2025-12-20 08:06:59,469 | INFO     | . Timing measurements:
[2025-12-20 03:07:32] 2025-12-20 08:06:59,469 | INFO     | . get job = 0 s
[2025-12-20 03:07:32] 2025-12-20 08:06:59,469 | INFO     | . initial setup = 2 s
[2025-12-20 03:07:32] 2025-12-20 08:06:59,469 | INFO     | . payload setup = 7 s
[2025-12-20 03:07:32] 2025-12-20 08:06:59,469 | INFO     | . stage-in = 0 s
[2025-12-20 03:07:32] 2025-12-20 08:06:59,469 | INFO     | . payload execution = 4393 s
[2025-12-20 03:07:32] 2025-12-20 08:06:59,470 | INFO     | . stage-out = 0 s
[2025-12-20 03:07:32] 2025-12-20 08:06:59,470 | INFO     | . log creation = 0 s
[2025-12-20 03:07:32] 2025-12-20 08:06:59,470 | INFO     | ..............................
[2025-12-20 03:07:32] 2025-12-20 08:06:59,551 | INFO     | 
[2025-12-20 03:07:32] 2025-12-20 08:06:59,551 | INFO     | job summary report
[2025-12-20 03:07:32] 2025-12-20 08:06:59,551 | INFO     | --------------------------------------------------
[2025-12-20 03:07:32] 2025-12-20 08:06:59,551 | INFO     | PanDA job id: 6935103128
[2025-12-20 03:07:32] 2025-12-20 08:06:59,551 | INFO     | task id: 47929280
[2025-12-20 03:07:32] 2025-12-20 08:06:59,552 | INFO     | errors: (none)
[2025-12-20 03:07:32] 2025-12-20 08:06:59,552 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-20 03:07:32] 2025-12-20 08:06:59,552 | INFO     | pilot state: finished 
[2025-12-20 03:07:32] 2025-12-20 08:06:59,552 | INFO     | transexitcode: 0
[2025-12-20 03:07:32] 2025-12-20 08:06:59,552 | INFO     | exeerrorcode: 0
[2025-12-20 03:07:32] 2025-12-20 08:06:59,552 | INFO     | exeerrordiag: 
[2025-12-20 03:07:32] 2025-12-20 08:06:59,553 | INFO     | exitcode: 0
[2025-12-20 03:07:32] 2025-12-20 08:06:59,553 | INFO     | exitmsg: OK
[2025-12-20 03:07:32] 2025-12-20 08:06:59,553 | INFO     | cpuconsumptiontime: 47526 s
[2025-12-20 03:07:32] 2025-12-20 08:06:59,553 | INFO     | nevents: 400
[2025-12-20 03:07:32] 2025-12-20 08:06:59,553 | INFO     | neventsw: 0
[2025-12-20 03:07:32] 2025-12-20 08:06:59,553 | INFO     | pid: 1561
[2025-12-20 03:07:32] 2025-12-20 08:06:59,553 | INFO     | pgrp: 1561
[2025-12-20 03:07:32] 2025-12-20 08:06:59,554 | INFO     | corecount: 12
[2025-12-20 03:07:32] 2025-12-20 08:06:59,554 | INFO     | event service: False
[2025-12-20 03:07:32] 2025-12-20 08:06:59,554 | INFO     | sizes: {0: 2284032, 5: 2284294, 11: 2284350, 4405: 2319392, 4406: 2319392, 4412: 2319586}
[2025-12-20 03:07:32] 2025-12-20 08:06:59,554 | INFO     | --------------------------------------------------
[2025-12-20 03:07:32] 2025-12-20 08:06:59,554 | INFO     | 
[2025-12-20 03:07:32] 2025-12-20 08:06:59,554 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-20 03:07:32] 2025-12-20 08:06:59,580 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-20 03:07:32] 2025-12-20 08:06:59,580 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-20 03:07:32] 2025-12-20 08:06:59,580 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-20 03:07:32] 2025-12-20 08:06:59,580 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-20 03:07:32] 2025-12-20 08:06:59,580 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-20 03:07:32] 2025-12-20 08:06:59,581 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-20 03:07:32] 2025-12-20 08:06:59,581 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-20 03:07:32] 2025-12-20 08:06:59,581 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-20 03:07:32] 2025-12-20 08:06:59,581 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-20 03:07:32] 2025-12-20 08:06:59,581 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-20 03:07:32] 2025-12-20 08:06:59,581 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-20 03:07:32] 2025-12-20 08:06:59,582 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-20 03:07:32] 2025-12-20 08:06:59,582 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-20 03:07:32] 2025-12-20 08:06:59,582 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-20 03:07:32] 2025-12-20 08:06:59,582 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-20 03:07:32] 2025-12-20 08:06:59,582 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-20 03:07:32] 2025-12-20 08:06:59,583 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-20 03:07:32] 2025-12-20 08:06:59,583 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-20 03:07:32] 2025-12-20 08:06:59,583 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-20 03:07:32] 2025-12-20 08:06:59,583 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-20 03:07:32] 2025-12-20 08:06:59,583 | INFO     | job 6935103128 has completed (purged errors)
[2025-12-20 03:07:32] 2025-12-20 08:06:59,584 | INFO     | overall cleanup function is called
[2025-12-20 03:07:32] 2025-12-20 08:07:00,592 | INFO     | --- collectZombieJob: --- 10, [1561]
[2025-12-20 03:07:32] 2025-12-20 08:07:00,592 | INFO     | zombie collector waiting for pid 1561
[2025-12-20 03:07:32] 2025-12-20 08:07:00,592 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-20 03:07:32] 2025-12-20 08:07:00,592 | INFO     | collected zombie processes
[2025-12-20 03:07:32] 2025-12-20 08:07:00,592 | INFO     | will attempt to kill all subprocesses of pid=1561
[2025-12-20 03:07:32] 2025-12-20 08:07:00,683 | INFO     | process IDs to be killed: [1561] (in reverse order)
[2025-12-20 03:07:32] 2025-12-20 08:07:00,737 | WARNING  | found no corresponding commands to process id(s)
[2025-12-20 03:07:32] 2025-12-20 08:07:00,738 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-20 03:07:32] 2025-12-20 08:07:00,741 | INFO     | did not find any defunct processes belonging to 1561
[2025-12-20 03:07:32] 2025-12-20 08:07:00,743 | INFO     | did not find any defunct processes belonging to 1561
[2025-12-20 03:07:32] 2025-12-20 08:07:00,743 | INFO     | ready for new job
[2025-12-20 03:07:32] 2025-12-20 08:07:00,743 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-20 03:07:32] 2025-12-20 08:07:00,744 | INFO     | ***************************************
[2025-12-20 03:07:32] 2025-12-20 08:07:00,744 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-20 03:07:32] 2025-12-20 08:07:00,744 | INFO     | ***************************************
[2025-12-20 03:07:32] 2025-12-20 08:07:00,744 | INFO     | 
[2025-12-20 03:07:32] 2025-12-20 08:07:00,745 | INFO     | architecture information:
[2025-12-20 03:07:32] 2025-12-20 08:07:00,745 | INFO     | executing command: cat /etc/os-release
[2025-12-20 03:07:32] 2025-12-20 08:07:00,760 | INFO     | cat /etc/os-release:
[2025-12-20 03:07:32] NAME="CentOS Linux"
[2025-12-20 03:07:32] VERSION="7 (Core)"
[2025-12-20 03:07:32] ID="centos"
[2025-12-20 03:07:32] ID_LIKE="rhel fedora"
[2025-12-20 03:07:32] VERSION_ID="7"
[2025-12-20 03:07:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-20 03:07:32] ANSI_COLOR="0;31"
[2025-12-20 03:07:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-20 03:07:32] HOME_URL="https://www.centos.org/"
[2025-12-20 03:07:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-20 03:07:32] 
[2025-12-20 03:07:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-20 03:07:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-20 03:07:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-20 03:07:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-20 03:07:32] 
[2025-12-20 03:07:32] 2025-12-20 08:07:00,760 | INFO     | ***************************************
[2025-12-20 03:07:32] 2025-12-20 08:07:01,263 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-20 03:07:32] 2025-12-20 08:07:01,281 | INFO     | sufficient remaining disk space (29300359168 B)
[2025-12-20 03:07:32] 2025-12-20 08:07:01,281 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-20 03:07:32] 2025-12-20 08:07:01,281 | INFO     | current server update state: UPDATING_FINAL
[2025-12-20 03:07:32] 2025-12-20 08:07:01,282 | INFO     | update_server=False
[2025-12-20 03:07:32] 2025-12-20 08:07:01,282 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-20 03:07:32] 2025-12-20 08:07:01,282 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-20 03:07:32] 2025-12-20 08:07:01,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-20 03:07:32] 2025-12-20 08:07:01,283 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-20 03:07:32] 2025-12-20 08:07:01,283 | INFO     | aborting loop
[2025-12-20 03:07:32] 2025-12-20 08:07:01,383 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-20 03:07:32] 2025-12-20 08:07:01,604 | INFO     | all job control threads have been joined
[2025-12-20 03:07:32] 2025-12-20 08:07:01,986 | INFO     | all data control threads have been joined
[2025-12-20 03:07:32] 2025-12-20 08:07:02,143 | INFO     | all payload control threads have been joined
[2025-12-20 03:07:32] 2025-12-20 08:07:02,287 | INFO     | [job] retrieve thread has finished
[2025-12-20 03:07:32] 2025-12-20 08:07:02,289 | INFO     | [job] queue monitor thread has finished
[2025-12-20 03:07:32] 2025-12-20 08:07:02,289 | INFO     | [job] job monitor thread has finished
[2025-12-20 03:07:32] 2025-12-20 08:07:02,460 | INFO     | [payload] failed_post thread has finished
[2025-12-20 03:07:32] 2025-12-20 08:07:02,470 | INFO     | [payload] execute_payloads thread has finished
[2025-12-20 03:07:32] 2025-12-20 08:07:02,609 | INFO     | [job] control thread has finished
[2025-12-20 03:07:32] 2025-12-20 08:07:02,815 | INFO     | [job] validate thread has finished
[2025-12-20 03:07:32] 2025-12-20 08:07:02,992 | INFO     | [data] control thread has finished
[2025-12-20 03:07:32] 2025-12-20 08:07:03,145 | INFO     | [payload] control thread has finished
[2025-12-20 03:07:32] 2025-12-20 08:07:03,151 | INFO     | [payload] validate_post thread has finished
[2025-12-20 03:07:32] 2025-12-20 08:07:03,388 | INFO     | [data] copytool_out thread has finished
[2025-12-20 03:07:32] 2025-12-20 08:07:03,441 | INFO     | [job] create_data_payload thread has finished
[2025-12-20 03:07:32] 2025-12-20 08:07:03,644 | INFO     | [payload] validate_pre thread has finished
[2025-12-20 03:07:32] 2025-12-20 08:07:03,782 | INFO     | [data] copytool_in thread has finished
[2025-12-20 03:07:32] 2025-12-20 08:07:05,284 | INFO     | [data] queue_monitor thread has finished
[2025-12-20 03:07:32] 2025-12-20 08:07:12,193 | INFO     | job.realtimelogging is not enabled
[2025-12-20 03:07:32] 2025-12-20 08:07:13,198 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-20 03:07:32] 2025-12-20 08:07:18,859 | INFO     | [monitor] cgroup control has ended
[2025-12-20 03:07:32] 2025-12-20 08:07:20,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139997424039744)>', '<ExcThread(monitor, started 139996371597056)>']
[2025-12-20 03:07:32] 2025-12-20 08:07:25,735 | INFO     | all workflow threads have been joined
[2025-12-20 03:07:32] 2025-12-20 08:07:25,735 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-20 03:07:32] 2025-12-20 08:07:25,735 | INFO     | traces error code: 0
[2025-12-20 03:07:32] 2025-12-20 08:07:25,736 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-20 03:07:32] 2025-12-20 08:07:32,098 | INFO     | PID=27588 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-20 03:07:32] 2025-12-20 08:07:32,099 | INFO     | found 0 job(s) in 20 queues
[2025-12-20 03:07:32] 2025-12-20 08:07:32,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-20 03:07:32] 2025-12-20 08:07:32,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-20 03:07:32] 2025-12-20 08:07:32,099 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-20 03:07:32] 2025-12-20 08:07:32,099 | CRITICAL | thread 'MainThread' is not alive
[2025-12-20 03:07:32] 2025-12-20 08:07:32,099 | INFO     | [monitor] control thread has ended
[2025-12-20 03:07:32] 2025-12-20 08:07:32,183 [wrapper] ==== pilot stdout END ====
[2025-12-20 03:07:32] 2025-12-20 08:07:32,187 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-20 03:07:32] 2025-12-20 08:07:32,191 [wrapper] pilotpid: 27588
[2025-12-20 03:07:32] 2025-12-20 08:07:32,195 [wrapper] Pilot exit status: 0
[2025-12-20 03:07:32] 2025-12-20 08:07:32,209 [wrapper] pandaids: 6935103128
[2025-12-20 03:07:32] 2025-12-20 08:07:32,248 [wrapper] cleanup supervisor_pilot 24299 27589
[2025-12-20 03:07:32] 2025-12-20 08:07:32,251 [wrapper] Test setup, not cleaning
[2025-12-20 03:07:32] 2025-12-20 08:07:32,255 [wrapper] apfmon messages muted
[2025-12-20 03:07:32] 2025-12-20 08:07:32,259 [wrapper] ==== wrapper stdout END ====
[2025-12-20 03:07:32] 2025-12-20 08:07:32,263 [wrapper] ==== wrapper stderr END ====
[2025-12-20 03:07:32]  *** Error codes and diagnostics ***
[2025-12-20 03:07:32]     "exeErrorCode": 0,
[2025-12-20 03:07:32]     "exeErrorDiag": "",
[2025-12-20 03:07:32]     "pilotErrorCode": 0,
[2025-12-20 03:07:32]     "pilotErrorDiag": "",
[2025-12-20 03:07:32]  *** Listing of results directory ***
[2025-12-20 03:07:32] total 431876
[2025-12-20 03:07:32] -rw-r--r-- 1 boincer umatlas      5112 Dec 19 03:01 queuedata.json
[2025-12-20 03:07:32] -rw-r--r-- 1 boincer umatlas    579449 Dec 19 03:01 pilot3.tar.gz
[2025-12-20 03:07:32] -rwx------ 1 boincer umatlas     36322 Dec 19 03:01 runpilot2-wrapper.sh
[2025-12-20 03:07:32] -rw-r--r-- 1 boincer umatlas       100 Dec 20 01:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-20 03:07:32] -rwxr-xr-x 1 boincer umatlas      7986 Dec 20 01:52 run_atlas
[2025-12-20 03:07:32] -rw-r--r-- 1 boincer umatlas       105 Dec 20 01:52 job.xml
[2025-12-20 03:07:32] -rw-r--r-- 2 boincer umatlas 249289607 Dec 20 01:52 EVNT.47929278._000102.pool.root.1
[2025-12-20 03:07:32] -rw-r--r-- 2 boincer umatlas     15847 Dec 20 01:52 start_atlas.sh
[2025-12-20 03:07:32] drwxrwx--x 2 boincer umatlas      4096 Dec 20 01:52 shared
[2025-12-20 03:07:32] -rw-r--r-- 2 boincer umatlas    592401 Dec 20 01:52 input.tar.gz
[2025-12-20 03:07:32] -rw-r--r-- 1 boincer umatlas         0 Dec 20 01:52 boinc_lockfile
[2025-12-20 03:07:32] -rw-r--r-- 1 boincer umatlas      2566 Dec 20 01:52 pandaJob.out
[2025-12-20 03:07:32] -rw------- 1 boincer umatlas        57 Dec 20 01:52 setup.sh.local
[2025-12-20 03:07:32] -rw------- 1 boincer umatlas    988146 Dec 20 01:53 agis_schedconf.cvmfs.json
[2025-12-20 03:07:32] -rw------- 1 boincer umatlas   1516240 Dec 20 01:53 agis_ddmendpoints.agis.ALL.json
[2025-12-20 03:07:32] drwx------ 5 boincer umatlas      4096 Dec 20 01:53 pilot3
[2025-12-20 03:07:32] -rw-r--r-- 1 boincer umatlas      5952 Dec 20 03:01 init_data.xml
[2025-12-20 03:07:32] -rw------- 1 boincer umatlas 187018282 Dec 20 03:06 HITS.47929280._002152.pool.root.1
[2025-12-20 03:07:32] -rw------- 1 boincer umatlas      1044 Dec 20 03:06 memory_monitor_summary.json
[2025-12-20 03:07:32] -rw------- 1 boincer umatlas    368358 Dec 20 03:06 log.47929280._002152.job.log.tgz.1
[2025-12-20 03:07:32] -rw-r--r-- 1 boincer umatlas       529 Dec 20 03:06 boinc_task_state.xml
[2025-12-20 03:07:32] -rw------- 1 boincer umatlas      7842 Dec 20 03:06 heartbeat.json
[2025-12-20 03:07:32] -rw-r--r-- 1 boincer umatlas      8192 Dec 20 03:07 boinc_mmap_file
[2025-12-20 03:07:32] -rw-r--r-- 1 boincer umatlas        27 Dec 20 03:07 wrapper_checkpoint.txt
[2025-12-20 03:07:32] -rw------- 1 boincer umatlas       815 Dec 20 03:07 pilotlog.txt
[2025-12-20 03:07:32] -rw------- 1 boincer umatlas        95 Dec 20 03:07 pilot_heartbeat.json
[2025-12-20 03:07:32] -rw------- 1 boincer umatlas    642020 Dec 20 03:07 log.47929280._002152.job.log.1
[2025-12-20 03:07:32] -rw------- 1 boincer umatlas       357 Dec 20 03:07 output.list
[2025-12-20 03:07:32] -rw-r--r-- 1 boincer umatlas       620 Dec 20 03:07 runtime_log
[2025-12-20 03:07:32] -rw------- 1 boincer umatlas   1034240 Dec 20 03:07 result.tar.gz
[2025-12-20 03:07:32] -rw-r--r-- 1 boincer umatlas      9344 Dec 20 03:07 runtime_log.err
[2025-12-20 03:07:32] -rw------- 1 boincer umatlas       659 Dec 20 03:07 K6uLDmYbkq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxbfKDm89KvRo.diag
[2025-12-20 03:07:32] -rw-r--r-- 1 boincer umatlas     21615 Dec 20 03:07 stderr.txt
[2025-12-20 03:07:32] HITS file was successfully produced:
[2025-12-20 03:07:32] -rw------- 1 boincer umatlas 187018282 Dec 20 03:06 shared/HITS.pool.root.1
[2025-12-20 03:07:32]  *** Contents of shared directory: ***
[2025-12-20 03:07:32] total 427696
[2025-12-20 03:07:32] -rw-r--r-- 2 boincer umatlas 249289607 Dec 20 01:52 ATLAS.root_0
[2025-12-20 03:07:32] -rw-r--r-- 2 boincer umatlas     15847 Dec 20 01:52 start_atlas.sh
[2025-12-20 03:07:32] -rw-r--r-- 2 boincer umatlas    592401 Dec 20 01:52 input.tar.gz
[2025-12-20 03:07:32] -rw------- 1 boincer umatlas 187018282 Dec 20 03:06 HITS.pool.root.1
[2025-12-20 03:07:32] -rw------- 1 boincer umatlas   1034240 Dec 20 03:07 result.tar.gz
03:07:34 (23866): run_atlas exited; CPU time 47505.893892
03:07:34 (23866): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN