Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:32:06 (3036804): wrapper (7.7.26015): starting
19:32:06 (3036804): wrapper: running run_atlas (--nthreads 3)
[2025-12-20 19:32:06] Arguments: --nthreads 3
[2025-12-20 19:32:06] Threads: 3
[2025-12-20 19:32:06] Checking for CVMFS
[2025-12-20 19:32:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-20 19:32:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-20 19:32:07] Running cvmfs_config stat atlas.cern.ch
[2025-12-20 19:32:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-20 19:32:07] 2.9.2.0 415797 10334 90140 154234 3 57 21365248 36864001 0 130560 0 6744836 99.990 368577 7129 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-20 19:32:07] CVMFS is ok
[2025-12-20 19:32:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-20 19:32:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-20 19:32:07] Further information can be found at the LHC@home message board.
[2025-12-20 19:32:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-20 19:32:07] Checking for apptainer binary...
[2025-12-20 19:32:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-20 19:32:07] Running /usr/bin/apptainer --version
[2025-12-20 19:32:07] apptainer version 1.4.1-1.1
[2025-12-20 19:32:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-20 19:32:07] magicA246a
[2025-12-20 19:32:07] apptainer works
[2025-12-20 19:32:07] Set ATHENA_PROC_NUMBER=3
[2025-12-20 19:32:07] Set ATHENA_CORE_NUMBER=3
[2025-12-20 19:32:07] Starting ATLAS job with PandaID=6935897124
[2025-12-20 19:32:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-20 20:52:36]  *** The last 200 lines of the pilot log: ***
[2025-12-20 20:52:36] VERSION="7 (Core)"
[2025-12-20 20:52:36] ID="centos"
[2025-12-20 20:52:36] ID_LIKE="rhel fedora"
[2025-12-20 20:52:36] VERSION_ID="7"
[2025-12-20 20:52:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-20 20:52:36] ANSI_COLOR="0;31"
[2025-12-20 20:52:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-20 20:52:36] HOME_URL="https://www.centos.org/"
[2025-12-20 20:52:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-20 20:52:36] 
[2025-12-20 20:52:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-20 20:52:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-20 20:52:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-20 20:52:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-20 20:52:36] 
[2025-12-20 20:52:36] 2025-12-20 19:52:05,625 | INFO     | ***************************************
[2025-12-20 20:52:36] 2025-12-20 19:52:06,128 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-20 20:52:36] 2025-12-20 19:52:06,139 | INFO     | sufficient remaining disk space (282386759680 B)
[2025-12-20 20:52:36] 2025-12-20 19:52:06,140 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-20 20:52:36] 2025-12-20 19:52:06,140 | INFO     | current server update state: UPDATING_FINAL
[2025-12-20 20:52:36] 2025-12-20 19:52:06,140 | INFO     | update_server=False
[2025-12-20 20:52:36] 2025-12-20 19:52:06,140 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-20 20:52:36] 2025-12-20 19:52:06,140 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-20 20:52:36] 2025-12-20 19:52:06,140 | INFO     | aborting loop
[2025-12-20 20:52:36] 2025-12-20 19:52:06,140 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-20 20:52:36] 2025-12-20 19:52:06,915 | INFO     | all data control threads have been joined
[2025-12-20 20:52:36] 2025-12-20 19:52:07,144 | INFO     | [job] retrieve thread has finished
[2025-12-20 20:52:36] 2025-12-20 19:52:07,145 | INFO     | [job] job monitor thread has finished
[2025-12-20 20:52:36] 2025-12-20 19:52:07,145 | INFO     | [job] queue monitor thread has finished
[2025-12-20 20:52:36] 2025-12-20 19:52:07,160 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-20 20:52:36] 2025-12-20 19:52:07,332 | INFO     | all payload control threads have been joined
[2025-12-20 20:52:36] 2025-12-20 19:52:07,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-20 20:52:36] 2025-12-20 19:52:07,722 | INFO     | all job control threads have been joined
[2025-12-20 20:52:36] 2025-12-20 19:52:07,752 | INFO     | [payload] execute_payloads thread has finished
[2025-12-20 20:52:36] 2025-12-20 19:52:07,920 | INFO     | [data] control thread has finished
[2025-12-20 20:52:36] 2025-12-20 19:52:07,959 | INFO     | [data] copytool_in thread has finished
[2025-12-20 20:52:36] 2025-12-20 19:52:08,023 | INFO     | [payload] failed_post thread has finished
[2025-12-20 20:52:36] 2025-12-20 19:52:08,338 | INFO     | [payload] control thread has finished
[2025-12-20 20:52:36] 2025-12-20 19:52:08,416 | INFO     | [job] validate thread has finished
[2025-12-20 20:52:36] 2025-12-20 19:52:08,529 | INFO     | [payload] validate_post thread has finished
[2025-12-20 20:52:36] 2025-12-20 19:52:08,543 | INFO     | [payload] validate_pre thread has finished
[2025-12-20 20:52:36] 2025-12-20 19:52:08,553 | INFO     | [job] create_data_payload thread has finished
[2025-12-20 20:52:36] 2025-12-20 19:52:08,728 | INFO     | [job] control thread has finished
[2025-12-20 20:52:36] 2025-12-20 19:52:09,165 | INFO     | [data] copytool_out thread has finished
[2025-12-20 20:52:36] 2025-12-20 19:52:11,689 | INFO     | [data] queue_monitor thread has finished
[2025-12-20 20:52:36] 2025-12-20 19:52:16,967 | INFO     | job.realtimelogging is not enabled
[2025-12-20 20:52:36] 2025-12-20 19:52:17,517 | INFO     | [monitor] cgroup control has ended
[2025-12-20 20:52:36] 2025-12-20 19:52:17,972 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-20 20:52:36] 2025-12-20 19:52:19,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139762902574912)>', '<ExcThread(monitor, started 139762052622080)>']
[2025-12-20 20:52:36] 2025-12-20 19:52:24,067 | INFO     | all workflow threads have been joined
[2025-12-20 20:52:36] 2025-12-20 19:52:24,068 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-20 20:52:36] 2025-12-20 19:52:24,068 | INFO     | traces error code: 0
[2025-12-20 20:52:36] 2025-12-20 19:52:24,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-20 20:52:36] 2025-12-20 19:52:35,934 | INFO     | PID=3040521 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-20 20:52:36] 2025-12-20 19:52:35,934 | INFO     | found 0 job(s) in 20 queues
[2025-12-20 20:52:36] 2025-12-20 19:52:35,934 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-20 20:52:36] 2025-12-20 19:52:35,934 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-20 20:52:36] 2025-12-20 19:52:35,934 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-20 20:52:36] 2025-12-20 19:52:35,935 | INFO     | [monitor] control thread has ended
[2025-12-20 20:52:36] 2025-12-20 19:52:35,991 [wrapper] ==== pilot stdout END ====
[2025-12-20 20:52:36] 2025-12-20 19:52:35,993 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-20 20:52:36] 2025-12-20 19:52:35,995 [wrapper] pilotpid: 3040521
[2025-12-20 20:52:36] 2025-12-20 19:52:35,998 [wrapper] Pilot exit status: 0
[2025-12-20 20:52:36] 2025-12-20 19:52:36,005 [wrapper] pandaids: 6935897124
[2025-12-20 20:52:36] 2025-12-20 19:52:36,024 [wrapper] cleanup supervisor_pilot 3059795 3040522
[2025-12-20 20:52:36] 2025-12-20 19:52:36,027 [wrapper] Test setup, not cleaning
[2025-12-20 20:52:36] 2025-12-20 19:52:36,029 [wrapper] apfmon messages muted
[2025-12-20 20:52:36] 2025-12-20 19:52:36,031 [wrapper] ==== wrapper stdout END ====
[2025-12-20 20:52:36] 2025-12-20 19:52:36,034 [wrapper] ==== wrapper stderr END ====
[2025-12-20 20:52:36]  *** Error codes and diagnostics ***
[2025-12-20 20:52:36]     "exeErrorCode": 0,
[2025-12-20 20:52:36]     "exeErrorDiag": "",
[2025-12-20 20:52:36]     "pilotErrorCode": 0,
[2025-12-20 20:52:36]     "pilotErrorDiag": "",
[2025-12-20 20:52:36]  *** Listing of results directory ***
[2025-12-20 20:52:36] total 434780
[2025-12-20 20:52:36] -rw-r--r-- 1 boinc boinc    579449 Dec 19 20:58 pilot3.tar.gz
[2025-12-20 20:52:36] -rwx------ 1 boinc boinc     36322 Dec 19 21:00 runpilot2-wrapper.sh
[2025-12-20 20:52:36] -rw-r--r-- 1 boinc boinc      5112 Dec 19 21:02 queuedata.json
[2025-12-20 20:52:36] -rw-r--r-- 1 boinc boinc       100 Dec 20 19:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-20 20:52:36] -rwxr-xr-x 1 boinc boinc      7986 Dec 20 19:32 run_atlas
[2025-12-20 20:52:36] -rw-r--r-- 1 boinc boinc       105 Dec 20 19:32 job.xml
[2025-12-20 20:52:36] -rw-r--r-- 2 boinc boinc 256134821 Dec 20 19:32 EVNT.47929390._000155.pool.root.1
[2025-12-20 20:52:36] -rw-r--r-- 2 boinc boinc    592394 Dec 20 19:32 input.tar.gz
[2025-12-20 20:52:36] -rw-r--r-- 2 boinc boinc     15847 Dec 20 19:32 start_atlas.sh
[2025-12-20 20:52:36] drwxrwx--x 2 boinc boinc      4096 Dec 20 19:32 shared
[2025-12-20 20:52:36] -rw-r--r-- 1 boinc boinc         0 Dec 20 19:32 boinc_setup_complete
[2025-12-20 20:52:36] -rw-r--r-- 1 boinc boinc      6447 Dec 20 19:32 init_data.xml
[2025-12-20 20:52:36] -rw-r--r-- 1 boinc boinc         0 Dec 20 19:32 boinc_lockfile
[2025-12-20 20:52:36] -rw-r--r-- 1 boinc boinc      2550 Dec 20 19:32 pandaJob.out
[2025-12-20 20:52:36] -rw------- 1 boinc boinc    988154 Dec 20 19:32 agis_schedconf.cvmfs.json
[2025-12-20 20:52:36] -rw------- 1 boinc boinc   1516240 Dec 20 19:32 agis_ddmendpoints.agis.ALL.json
[2025-12-20 20:52:36] drwx------ 5 boinc boinc      4096 Dec 20 19:32 pilot3
[2025-12-20 20:52:36] -rw------- 1 boinc boinc        95 Dec 20 20:51 pilot_heartbeat.json
[2025-12-20 20:52:36] -rw------- 1 boinc boinc 183230801 Dec 20 20:51 HITS.47929392._004150.pool.root.1
[2025-12-20 20:52:36] -rw-r--r-- 1 boinc boinc       529 Dec 20 20:51 boinc_task_state.xml
[2025-12-20 20:52:36] -rw------- 1 boinc boinc      1016 Dec 20 20:51 memory_monitor_summary.json
[2025-12-20 20:52:36] -rw------- 1 boinc boinc    267568 Dec 20 20:52 log.47929392._004150.job.log.tgz.1
[2025-12-20 20:52:36] -rw------- 1 boinc boinc      7755 Dec 20 20:52 heartbeat.json
[2025-12-20 20:52:36] -rw-r--r-- 1 boinc boinc      8192 Dec 20 20:52 boinc_mmap_file
[2025-12-20 20:52:36] -rw-r--r-- 1 boinc boinc        27 Dec 20 20:52 wrapper_checkpoint.txt
[2025-12-20 20:52:36] -rw------- 1 boinc boinc       747 Dec 20 20:52 pilotlog.txt
[2025-12-20 20:52:36] -rw------- 1 boinc boinc    706044 Dec 20 20:52 log.47929392._004150.job.log.1
[2025-12-20 20:52:36] -rw------- 1 boinc boinc       357 Dec 20 20:52 output.list
[2025-12-20 20:52:36] -rw-r--r-- 1 boinc boinc       620 Dec 20 20:52 runtime_log
[2025-12-20 20:52:36] -rw------- 1 boinc boinc    993280 Dec 20 20:52 result.tar.gz
[2025-12-20 20:52:36] -rw-r--r-- 1 boinc boinc      8917 Dec 20 20:52 runtime_log.err
[2025-12-20 20:52:36] -rw------- 1 boinc boinc       662 Dec 20 20:52 6LPKDmapvq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4ogKDmcNYUNn.diag
[2025-12-20 20:52:36] -rw-r--r-- 1 boinc boinc      8763 Dec 20 20:52 stderr.txt
[2025-12-20 20:52:36] HITS file was successfully produced:
[2025-12-20 20:52:36] -rw------- 1 boinc boinc 183230801 Dec 20 20:51 shared/HITS.pool.root.1
[2025-12-20 20:52:36]  *** Contents of shared directory: ***
[2025-12-20 20:52:36] total 430648
[2025-12-20 20:52:36] -rw-r--r-- 2 boinc boinc 256134821 Dec 20 19:32 ATLAS.root_0
[2025-12-20 20:52:36] -rw-r--r-- 2 boinc boinc    592394 Dec 20 19:32 input.tar.gz
[2025-12-20 20:52:36] -rw-r--r-- 2 boinc boinc     15847 Dec 20 19:32 start_atlas.sh
[2025-12-20 20:52:36] -rw------- 1 boinc boinc 183230801 Dec 20 20:51 HITS.pool.root.1
[2025-12-20 20:52:36] -rw------- 1 boinc boinc    993280 Dec 20 20:52 result.tar.gz
20:52:37 (3036804): run_atlas exited; CPU time 13763.384363
20:52:37 (3036804): called boinc_finish(0)

</stderr_txt>
]]>

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