Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:25:20 (1281553): wrapper (7.7.26015): starting
17:25:20 (1281553): wrapper: running run_atlas (--nthreads 12)
[2025-12-19 17:25:20] Arguments: --nthreads 12
[2025-12-19 17:25:20] Threads: 12
[2025-12-19 17:25:20] Checking for CVMFS
[2025-12-19 17:25:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 17:25:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 17:25:20] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 17:25:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 17:25:21] 2.11.5.0 3627452 61971 226732 154208 0 160 40153900 45568001 27758 130560 0 511687604 99.788 322700177 22329 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-12-19 17:25:21] CVMFS is ok
[2025-12-19 17:25:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-19 17:25:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-19 17:25:21] Further information can be found at the LHC@home message board.
[2025-12-19 17:25:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 17:25:21] Checking for apptainer binary...
[2025-12-19 17:25:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 17:25:21] Running /usr/bin/apptainer --version
[2025-12-19 17:25:21] apptainer version 1.4.1-1.el9
[2025-12-19 17:25:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 17:25:21] wns0050.triumf.lcg
[2025-12-19 17:25:21] apptainer works
[2025-12-19 17:25:21] Set ATHENA_PROC_NUMBER=12
[2025-12-19 17:25:21] Set ATHENA_CORE_NUMBER=12
[2025-12-19 17:25:21] Starting ATLAS job with PandaID=6935893273
[2025-12-19 17:25:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 17:29:53]  *** The last 200 lines of the pilot log: ***
[2025-12-19 17:29:53] 2025-12-20 01:29:17,618 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 17:29:53] 2025-12-20 01:29:17,618 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 17:29:53] 2025-12-20 01:29:17,618 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | WARNING  | wrong length of table data, x=[1766193997.0], y=[1799.0] (must be same and length>=4)
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | could have reported an average CPU frequency of 2672 MHz (4 samples)
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | ..............................
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . Timing measurements:
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . get job = 0 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . initial setup = 3 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . payload setup = 15 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . stage-in = 0 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . payload execution = 38 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . stage-out = 0 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . log creation = 0 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | ..............................
[2025-12-19 17:29:53] 2025-12-20 01:29:17,620 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-19 17:29:53] 2025-12-20 01:29:17,620 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6935893273/pilotlog.txt
[2025-12-19 17:29:53] 2025-12-20 01:29:17,631 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-19 17:29:53] - Log from pilotlog.txt -
[2025-12-19 17:29:53] 2025-12-20 01:29:17,617 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6935893273/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 17:29:53] 2025-12-20 01:29:17,618 | INFO     | extracted standard info from prmon json
[2025-12-19 17:29:53] 2025-12-20 01:29:17,618 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 17:29:53] 2025-12-20 01:29:17,618 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 17:29:53] 2025-12-20 01:29:17,618 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 17:29:53] 2025-12-20 01:29:17,618 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | WARNING  | wrong length of table data, x=[1766193997.0], y=[1799.0] (must be same and length>=4)
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | could have reported an average CPU frequency of 2672 MHz (4 samples)
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | ..............................
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . Timing measurements:
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . get job = 0 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . initial setup = 3 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . payload setup = 15 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . stage-in = 0 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . payload execution = 38 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . stage-out = 0 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . log creation = 0 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | ..............................
[2025-12-19 17:29:53] 2025-12-20 01:29:17,620 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-19 17:29:53] 2025-12-20 01:29:17,620 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6935893273/pilotlog.txt
[2025-12-19 17:29:53] 2025-12-20 01:29:17,631 | WARNING  | 
[2025-12-19 17:29:53] [begin log extracts]
[2025-12-19 17:29:53] - Log from pilotlog.txt -
[2025-12-19 17:29:53] 2025-12-20 01:29:17,617 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6935893273/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 17:29:53] 2025-12-20 01:29:17,618 | INFO     | extracted standard info from prmon json
[2025-12-19 17:29:53] 2025-12-20 01:29:17,618 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 17:29:53] 2025-12-20 01:29:17,618 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 17:29:53] 2025-12-20 01:29:17,618 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 17:29:53] 2025-12-20 01:29:17,618 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | WARNING  | wrong length of table data, x=[1766193997.0], y=[1799.0] (must be same and length>=4)
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | could have reported an average CPU frequency of 2672 MHz (4 samples)
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | ..............................
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . Timing measurements:
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . get job = 0 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . initial setup = 3 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . payload setup = 15 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . stage-in = 0 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . payload execution = 38 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . stage-out = 0 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | . log creation = 0 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,619 | INFO     | ..............................
[2025-12-19 17:29:53] 2025-12-20 01:29:17,620 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-19 17:29:53] 2025-12-20 01:29:17,620 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6935893273/pilotlog.txt
[2025-12-19 17:29:53] [end log extracts]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,631 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-19 17:29:53] 2025-12-20 01:29:17,632 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-19 17:29:53] 2025-12-20 01:29:17,817 | INFO     | 
[2025-12-19 17:29:53] 2025-12-20 01:29:17,817 | INFO     | job summary report
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | --------------------------------------------------
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | PanDA job id: 6935893273
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | task id: 47929392
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-19 17:26:58,762 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | pilot state: failed 
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | transexitcode: 65
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | exeerrorcode: 65
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | exitcode: 65
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | cpuconsumptiontime: 17 s
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | nevents: 0
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | neventsw: 0
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | pid: 1291956
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | pgrp: 1291956
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | corecount: 12
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | event service: False
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | sizes: {0: 2284011, 1: 2284011, 9: 2284301, 11: 2284329, 58: 2307587, 60: 2311879, 61: 2312035, 188: 2312201}
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | --------------------------------------------------
[2025-12-19 17:29:53] 2025-12-20 01:29:17,818 | INFO     | 
[2025-12-19 17:29:53] 2025-12-20 01:29:17,819 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-19 17:29:53] 2025-12-20 01:29:17,844 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,844 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,844 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,844 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,844 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,844 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,844 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,844 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,844 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,844 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,844 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,844 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,844 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,844 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,845 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,845 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,845 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,845 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 17:29:53] 2025-12-20 01:29:17,845 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,845 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 17:29:53] 2025-12-20 01:29:17,845 | INFO     | job 6935893273 has completed (purged errors)
[2025-12-19 17:29:53] 2025-12-20 01:29:17,845 | INFO     | overall cleanup function is called
[2025-12-19 17:29:53] 2025-12-20 01:29:18,852 | INFO     | --- collectZombieJob: --- 10, [1291956]
[2025-12-19 17:29:53] 2025-12-20 01:29:18,852 | INFO     | zombie collector waiting for pid 1291956
[2025-12-19 17:29:53] 2025-12-20 01:29:18,852 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 17:29:53] 2025-12-20 01:29:18,852 | INFO     | collected zombie processes
[2025-12-19 17:29:53] 2025-12-20 01:29:18,852 | INFO     | will attempt to kill all subprocesses of pid=1291956
[2025-12-19 17:29:53] 2025-12-20 01:29:19,051 | INFO     | process IDs to be killed: [1291956] (in reverse order)
[2025-12-19 17:29:53] 2025-12-20 01:29:19,130 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 17:29:53] 2025-12-20 01:29:19,130 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 17:29:53] 2025-12-20 01:29:19,151 | INFO     | did not find any defunct processes belonging to 1291956
[2025-12-19 17:29:53] 2025-12-20 01:29:19,159 | INFO     | did not find any defunct processes belonging to 1291956
[2025-12-19 17:29:53] 2025-12-20 01:29:19,159 | INFO     | ready for new job
[2025-12-19 17:29:53] 2025-12-20 01:29:19,160 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 17:29:53] 2025-12-20 01:29:19,161 | INFO     | ***************************************
[2025-12-19 17:29:53] 2025-12-20 01:29:19,161 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 17:29:53] 2025-12-20 01:29:19,161 | INFO     | ***************************************
[2025-12-19 17:29:53] 2025-12-20 01:29:19,161 | INFO     | 
[2025-12-19 17:29:53] 2025-12-20 01:29:19,206 | INFO     | architecture information:
[2025-12-19 17:29:53] 2025-12-20 01:29:19,206 | INFO     | executing command: cat /etc/os-release
[2025-12-19 17:29:53] 2025-12-20 01:29:19,254 | INFO     | cat /etc/os-release:
[2025-12-19 17:29:53] NAME="CentOS Linux"
[2025-12-19 17:29:53] VERSION="7 (Core)"
[2025-12-19 17:29:53] ID="centos"
[2025-12-19 17:29:53] ID_LIKE="rhel fedora"
[2025-12-19 17:29:53] VERSION_ID="7"
[2025-12-19 17:29:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 17:29:53] ANSI_COLOR="0;31"
[2025-12-19 17:29:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 17:29:53] HOME_URL="https://www.centos.org/"
[2025-12-19 17:29:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 17:29:53] 
[2025-12-19 17:29:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 17:29:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 17:29:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 17:29:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 17:29:53] 
[2025-12-19 17:29:53] 2025-12-20 01:29:19,254 | INFO     | ***************************************
[2025-12-19 17:29:53] 2025-12-20 01:29:19,758 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-19 17:29:53] 2025-12-20 01:29:19,826 | INFO     | sufficient remaining disk space (1859737616384 B)
[2025-12-19 17:29:53] 2025-12-20 01:29:19,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 17:29:53] 2025-12-20 01:29:19,827 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 17:29:53] 2025-12-20 01:29:19,827 | INFO     | update_server=False
[2025-12-19 17:29:53] 2025-12-20 01:29:19,827 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 17:29:53] 2025-12-20 01:29:19,828 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 17:29:53] 2025-12-20 01:29:19,828 | INFO     | aborting loop
[2025-12-19 17:29:53] 2025-12-20 01:29:19,832 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 17:29:53] 2025-12-20 01:29:19,998 | INFO     | all data control threads have been joined
[2025-12-19 17:29:53] 2025-12-20 01:29:19,998 | INFO     | all payload control threads have been joined
[2025-12-19 17:29:53] 2025-12-20 01:29:20,659 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 17:29:53] 2025-12-20 01:29:20,704 | INFO     | all job control threads have been joined
[2025-12-19 17:29:53] 2025-12-20 01:29:20,834 | INFO     | [job] job monitor thread has finished
[2025-12-19 17:29:53] 2025-12-20 01:29:20,843 | INFO     | [job] retrieve thread has finished
[2025-12-19 17:29:53] 2025-12-20 01:29:21,004 | INFO     | [data] control thread has finished
[2025-12-19 17:29:53] 2025-12-20 01:29:21,004 | INFO     | [payload] control thread has finished
[2025-12-19 17:29:53] 2025-12-20 01:29:21,264 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 17:29:53] 2025-12-20 01:29:21,264 | INFO     | [job] validate thread has finished
[2025-12-19 17:29:53] 2025-12-20 01:29:21,313 | INFO     | [payload] failed_post thread has finished
[2025-12-19 17:29:53] 2025-12-20 01:29:21,346 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 17:29:53] 2025-12-20 01:29:21,670 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 17:29:53] 2025-12-20 01:29:21,674 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 17:29:53] 2025-12-20 01:29:21,710 | INFO     | [job] control thread has finished
[2025-12-19 17:29:53] 2025-12-20 01:29:21,743 | INFO     | [data] copytool_in thread has finished
[2025-12-19 17:29:53] 2025-12-20 01:29:22,283 | INFO     | [payload] validate_post thread has finished
[2025-12-19 17:29:53] 2025-12-20 01:29:22,666 | INFO     | [data] copytool_out thread has finished
[2025-12-19 17:29:53] 2025-12-20 01:29:22,831 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 17:29:53] 2025-12-20 01:29:23,837 | INFO     | [job] queue monitor thread has finished
[2025-12-19 17:29:53] 2025-12-20 01:29:23,851 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 17:29:53] 2025-12-20 01:29:47,341 | INFO     | [monitor] cgroup control has ended
[2025-12-19 17:29:53] 2025-12-20 01:29:47,415 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140678819157824)>', '<ExcThread(monitor, started 140678273156864)>']
[2025-12-19 17:29:53] 2025-12-20 01:29:50,815 | INFO     | PID=1285282 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-19 17:29:53] 2025-12-20 01:29:50,816 | INFO     | .. there are 35 such processes running
[2025-12-19 17:29:53] 2025-12-20 01:29:50,816 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 17:29:53] 2025-12-20 01:29:50,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 17:29:53] 2025-12-20 01:29:50,817 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 17:29:53] 2025-12-20 01:29:50,817 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 17:29:53] 2025-12-20 01:29:50,817 | INFO     | [monitor] control thread has ended
[2025-12-19 17:29:53] 2025-12-20 01:29:52,441 | INFO     | all workflow threads have been joined
[2025-12-19 17:29:53] 2025-12-20 01:29:52,441 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 17:29:53] 2025-12-20 01:29:52,441 | INFO     | traces error code: 0
[2025-12-19 17:29:53] 2025-12-20 01:29:52,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 17:29:53] 2025-12-20 01:29:52,672 [wrapper] ==== pilot stdout END ====
[2025-12-19 17:29:53] 2025-12-20 01:29:52,673 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 17:29:53] 2025-12-20 01:29:52,675 [wrapper] pilotpid: 1285282
[2025-12-19 17:29:53] 2025-12-20 01:29:52,676 [wrapper] Pilot exit status: 0
[2025-12-19 17:29:53] 2025-12-20 01:29:52,737 [wrapper] pandaids: 6935893273
[2025-12-19 17:29:53] 2025-12-20 01:29:52,888 [wrapper] cleanup supervisor_pilot 1285288 1285283
[2025-12-19 17:29:53] 2025-12-20 01:29:52,901 [wrapper] Test setup, not cleaning
[2025-12-19 17:29:53] 2025-12-20 01:29:52,934 [wrapper] apfmon messages muted
[2025-12-19 17:29:53] 2025-12-20 01:29:52,957 [wrapper] ==== wrapper stdout END ====
[2025-12-19 17:29:53] 2025-12-20 01:29:52,989 [wrapper] ==== wrapper stderr END ====
[2025-12-19 17:29:53]  *** Error codes and diagnostics ***
[2025-12-19 17:29:53]     "exeErrorCode": 65,
[2025-12-19 17:29:53]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-19 17:29:53]     "pilotErrorCode": 1305,
[2025-12-19 17:29:53]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-19 17:29:53]  *** Listing of results directory ***
[2025-12-19 17:29:53] total 248572
[2025-12-19 17:29:53] -rw-r--r--. 1 boinc boinc    579449 Dec 19 08:45 pilot3.tar.gz
[2025-12-19 17:29:53] -rwx------. 1 boinc boinc     36322 Dec 19 08:47 runpilot2-wrapper.sh
[2025-12-19 17:29:53] -rw-r--r--. 1 boinc boinc      5112 Dec 19 08:51 queuedata.json
[2025-12-19 17:29:53] -rw-r--r--. 1 boinc boinc       100 Dec 19 17:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 17:29:53] -rwxr-xr-x. 1 boinc boinc      7986 Dec 19 17:25 run_atlas
[2025-12-19 17:29:53] -rw-r--r--. 1 boinc boinc       105 Dec 19 17:25 job.xml
[2025-12-19 17:29:53] -rw-r--r--. 2 boinc boinc 250397710 Dec 19 17:25 EVNT.47929390._000094.pool.root.1
[2025-12-19 17:29:53] -rw-r--r--. 2 boinc boinc     15847 Dec 19 17:25 start_atlas.sh
[2025-12-19 17:29:53] drwxrwx--x. 2 boinc boinc      4096 Dec 19 17:25 shared
[2025-12-19 17:29:53] -rw-r--r--. 2 boinc boinc    592399 Dec 19 17:25 input.tar.gz
[2025-12-19 17:29:53] -rw-r--r--. 1 boinc boinc      6595 Dec 19 17:25 init_data.xml
[2025-12-19 17:29:53] -rw-r--r--. 1 boinc boinc         0 Dec 19 17:25 boinc_lockfile
[2025-12-19 17:29:53] -rw-r--r--. 1 boinc boinc      2548 Dec 19 17:25 pandaJob.out
[2025-12-19 17:29:53] -rw-------. 1 boinc boinc    988154 Dec 19 17:25 agis_schedconf.cvmfs.json
[2025-12-19 17:29:53] -rw-------. 1 boinc boinc   1516240 Dec 19 17:25 agis_ddmendpoints.agis.ALL.json
[2025-12-19 17:29:53] drwx------. 5 boinc boinc      4096 Dec 19 17:25 pilot3
[2025-12-19 17:29:53] -rw-r--r--. 1 boinc boinc       522 Dec 19 17:26 boinc_task_state.xml
[2025-12-19 17:29:53] -rw-------. 1 boinc boinc       953 Dec 19 17:27 memory_monitor_summary.json
[2025-12-19 17:29:53] -rw-------. 1 boinc boinc     21461 Dec 19 17:27 log.47929392._002328.job.log.tgz.1
[2025-12-19 17:29:53] -rw-------. 1 boinc boinc      8401 Dec 19 17:29 heartbeat.json
[2025-12-19 17:29:53] -rw-r--r--. 1 boinc boinc      8192 Dec 19 17:29 boinc_mmap_file
[2025-12-19 17:29:53] -rw-r--r--. 1 boinc boinc        22 Dec 19 17:29 wrapper_checkpoint.txt
[2025-12-19 17:29:53] -rw-------. 1 boinc boinc        95 Dec 19 17:29 pilot_heartbeat.json
[2025-12-19 17:29:53] -rw-------. 1 boinc boinc      4823 Dec 19 17:29 pilotlog.txt
[2025-12-19 17:29:53] -rw-------. 1 boinc boinc     88488 Dec 19 17:29 log.47929392._002328.job.log.1
[2025-12-19 17:29:53] -rw-------. 1 boinc boinc       188 Dec 19 17:29 output.list
[2025-12-19 17:29:53] -rw-r--r--. 1 boinc boinc       620 Dec 19 17:29 runtime_log
[2025-12-19 17:29:53] -rw-------. 1 boinc boinc    133120 Dec 19 17:29 result.tar.gz
[2025-12-19 17:29:53] -rw-------. 1 boinc boinc       647 Dec 19 17:29 sAxNDmMosq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeegKDmc4gpwn.diag
[2025-12-19 17:29:53] -rw-r--r--. 1 boinc boinc      8636 Dec 19 17:29 runtime_log.err
[2025-12-19 17:29:53] -rw-r--r--. 1 boinc boinc     21792 Dec 19 17:29 stderr.txt
[2025-12-19 17:29:53] No HITS result produced
[2025-12-19 17:29:53]  *** Contents of shared directory: ***
[2025-12-19 17:29:53] total 245264
[2025-12-19 17:29:53] -rw-r--r--. 2 boinc boinc 250397710 Dec 19 17:25 ATLAS.root_0
[2025-12-19 17:29:53] -rw-r--r--. 2 boinc boinc     15847 Dec 19 17:25 start_atlas.sh
[2025-12-19 17:29:53] -rw-r--r--. 2 boinc boinc    592399 Dec 19 17:25 input.tar.gz
[2025-12-19 17:29:53] -rw-------. 1 boinc boinc    133120 Dec 19 17:29 result.tar.gz
17:29:54 (1281553): run_atlas exited; CPU time 25.110660
17:29:54 (1281553): called boinc_finish(0)

</stderr_txt>
]]>

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