Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:06:44 (3721794): wrapper (7.7.26015): starting
17:06:44 (3721794): wrapper: running run_atlas (--nthreads 12)
[2025-12-19 17:06:44] Arguments: --nthreads 12
[2025-12-19 17:06:44] Threads: 12
[2025-12-19 17:06:44] Checking for CVMFS
[2025-12-19 17:06:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 17:06:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 17:06:45] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 17:06:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 17:06:46] 2.11.5.0 86566 27085 271864 154207 0 582 23013464 45568000 24298 130560 0 191073349 99.781 115157555 23335 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-19 17:06:46] CVMFS is ok
[2025-12-19 17:06:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-19 17:06:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-19 17:06:47] Further information can be found at the LHC@home message board.
[2025-12-19 17:06:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 17:06:47] Checking for apptainer binary...
[2025-12-19 17:06:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 17:06:47] Running /usr/bin/apptainer --version
[2025-12-19 17:06:47] apptainer version 1.4.1-1.el9
[2025-12-19 17:06:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 17:06:48] wns0083.triumf.lcg
[2025-12-19 17:06:48] apptainer works
[2025-12-19 17:06:48] Set ATHENA_PROC_NUMBER=12
[2025-12-19 17:06:48] Set ATHENA_CORE_NUMBER=12
[2025-12-19 17:06:48] Starting ATLAS job with PandaID=6935455981
[2025-12-19 17:06:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 17:12:22]  *** The last 200 lines of the pilot log: ***
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | WARNING  | wrong length of table data, x=[1766192935.0], y=[980.0] (must be same and length>=4)
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | INFO     | could have reported an average CPU frequency of 2739 MHz (4 samples)
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | INFO     | ..............................
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | INFO     | . Timing measurements:
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | INFO     | . get job = 0 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | INFO     | . initial setup = 4 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | INFO     | . payload setup = 21 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | . stage-in = 0 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | . payload execution = 28 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | . stage-out = 1 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | . log creation = 0 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | ..............................
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6935455981/pilotlog.txt
[2025-12-19 17:12:22] 2025-12-20 01:11:28,707 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-19 17:12:22] - Log from pilotlog.txt -
[2025-12-19 17:12:22] 2025-12-20 01:11:28,578 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6935455981/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 17:12:22] 2025-12-20 01:11:28,579 | INFO     | extracted standard info from prmon json
[2025-12-19 17:12:22] 2025-12-20 01:11:28,579 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 17:12:22] 2025-12-20 01:11:28,579 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | WARNING  | wrong length of table data, x=[1766192935.0], y=[980.0] (must be same and length>=4)
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | INFO     | could have reported an average CPU frequency of 2739 MHz (4 samples)
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | INFO     | ..............................
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | INFO     | . Timing measurements:
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | INFO     | . get job = 0 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | INFO     | . initial setup = 4 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | INFO     | . payload setup = 21 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | . stage-in = 0 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | . payload execution = 28 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | . stage-out = 1 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | . log creation = 0 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | ..............................
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6935455981/pilotlog.txt
[2025-12-19 17:12:22] 2025-12-20 01:11:28,707 | WARNING  | 
[2025-12-19 17:12:22] [begin log extracts]
[2025-12-19 17:12:22] - Log from pilotlog.txt -
[2025-12-19 17:12:22] 2025-12-20 01:11:28,578 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6935455981/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 17:12:22] 2025-12-20 01:11:28,579 | INFO     | extracted standard info from prmon json
[2025-12-19 17:12:22] 2025-12-20 01:11:28,579 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 17:12:22] 2025-12-20 01:11:28,579 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | WARNING  | wrong length of table data, x=[1766192935.0], y=[980.0] (must be same and length>=4)
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | INFO     | could have reported an average CPU frequency of 2739 MHz (4 samples)
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | INFO     | ..............................
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | INFO     | . Timing measurements:
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | INFO     | . get job = 0 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | INFO     | . initial setup = 4 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,580 | INFO     | . payload setup = 21 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | . stage-in = 0 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | . payload execution = 28 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | . stage-out = 1 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | . log creation = 0 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | ..............................
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-19 17:12:22] 2025-12-20 01:11:28,581 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6935455981/pilotlog.txt
[2025-12-19 17:12:22] [end log extracts]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,708 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-19 17:12:22] 2025-12-20 01:11:28,708 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-19 17:12:22] 2025-12-20 01:11:28,861 | INFO     | 
[2025-12-19 17:12:22] 2025-12-20 01:11:28,861 | INFO     | job summary report
[2025-12-19 17:12:22] 2025-12-20 01:11:28,861 | INFO     | --------------------------------------------------
[2025-12-19 17:12:22] 2025-12-20 01:11:28,861 | INFO     | PanDA job id: 6935455981
[2025-12-19 17:12:22] 2025-12-20 01:11:28,861 | INFO     | task id: 47929288
[2025-12-19 17:12:22] 2025-12-20 01:11:28,862 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-19 17:09:08,326 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-19 17:12:22] 2025-12-20 01:11:28,862 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 17:12:22] 2025-12-20 01:11:28,862 | INFO     | pilot state: failed 
[2025-12-19 17:12:22] 2025-12-20 01:11:28,862 | INFO     | transexitcode: 65
[2025-12-19 17:12:22] 2025-12-20 01:11:28,862 | INFO     | exeerrorcode: 65
[2025-12-19 17:12:22] 2025-12-20 01:11:28,862 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-19 17:12:22] 2025-12-20 01:11:28,862 | INFO     | exitcode: 65
[2025-12-19 17:12:22] 2025-12-20 01:11:28,862 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-19 17:12:22] 2025-12-20 01:11:28,862 | INFO     | cpuconsumptiontime: 16 s
[2025-12-19 17:12:22] 2025-12-20 01:11:28,862 | INFO     | nevents: 0
[2025-12-19 17:12:22] 2025-12-20 01:11:28,862 | INFO     | neventsw: 0
[2025-12-19 17:12:22] 2025-12-20 01:11:28,862 | INFO     | pid: 3732371
[2025-12-19 17:12:22] 2025-12-20 01:11:28,862 | INFO     | pgrp: 3732371
[2025-12-19 17:12:22] 2025-12-20 01:11:28,862 | INFO     | corecount: 12
[2025-12-19 17:12:22] 2025-12-20 01:11:28,862 | INFO     | event service: False
[2025-12-19 17:12:22] 2025-12-20 01:11:28,862 | INFO     | sizes: {0: 2283785, 1: 2284040, 12: 2284040, 23: 2284068, 25: 2284358, 34: 2284386, 54: 2307769, 55: 2307745, 56: 2312065, 58: 2312093, 187: 2312259}
[2025-12-19 17:12:22] 2025-12-20 01:11:28,862 | INFO     | --------------------------------------------------
[2025-12-19 17:12:22] 2025-12-20 01:11:28,862 | INFO     | 
[2025-12-19 17:12:22] 2025-12-20 01:11:28,862 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-19 17:12:22] 2025-12-20 01:11:28,876 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,876 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,876 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,876 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,876 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,876 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,876 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,877 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,877 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,877 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,877 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,877 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,877 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,877 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,877 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,877 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,877 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,877 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 17:12:22] 2025-12-20 01:11:28,877 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,877 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 17:12:22] 2025-12-20 01:11:28,877 | INFO     | job 6935455981 has completed (purged errors)
[2025-12-19 17:12:22] 2025-12-20 01:11:28,877 | INFO     | overall cleanup function is called
[2025-12-19 17:12:22] 2025-12-20 01:11:29,884 | INFO     | --- collectZombieJob: --- 10, [3732371]
[2025-12-19 17:12:22] 2025-12-20 01:11:29,884 | INFO     | zombie collector waiting for pid 3732371
[2025-12-19 17:12:22] 2025-12-20 01:11:29,884 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 17:12:22] 2025-12-20 01:11:29,884 | INFO     | collected zombie processes
[2025-12-19 17:12:22] 2025-12-20 01:11:29,884 | INFO     | will attempt to kill all subprocesses of pid=3732371
[2025-12-19 17:12:22] 2025-12-20 01:11:30,319 | INFO     | process IDs to be killed: [3732371] (in reverse order)
[2025-12-19 17:12:22] 2025-12-20 01:11:30,456 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 17:12:22] 2025-12-20 01:11:30,457 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 17:12:22] 2025-12-20 01:11:30,464 | INFO     | did not find any defunct processes belonging to 3732371
[2025-12-19 17:12:22] 2025-12-20 01:11:30,471 | INFO     | did not find any defunct processes belonging to 3732371
[2025-12-19 17:12:22] 2025-12-20 01:11:30,471 | INFO     | ready for new job
[2025-12-19 17:12:22] 2025-12-20 01:11:30,471 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 17:12:22] 2025-12-20 01:11:30,472 | INFO     | ***************************************
[2025-12-19 17:12:22] 2025-12-20 01:11:30,472 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 17:12:22] 2025-12-20 01:11:30,473 | INFO     | ***************************************
[2025-12-19 17:12:22] 2025-12-20 01:11:30,473 | INFO     | 
[2025-12-19 17:12:22] 2025-12-20 01:11:30,474 | INFO     | architecture information:
[2025-12-19 17:12:22] 2025-12-20 01:11:30,475 | INFO     | executing command: cat /etc/os-release
[2025-12-19 17:12:22] 2025-12-20 01:11:30,485 | INFO     | cat /etc/os-release:
[2025-12-19 17:12:22] NAME="CentOS Linux"
[2025-12-19 17:12:22] VERSION="7 (Core)"
[2025-12-19 17:12:22] ID="centos"
[2025-12-19 17:12:22] ID_LIKE="rhel fedora"
[2025-12-19 17:12:22] VERSION_ID="7"
[2025-12-19 17:12:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 17:12:22] ANSI_COLOR="0;31"
[2025-12-19 17:12:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 17:12:22] HOME_URL="https://www.centos.org/"
[2025-12-19 17:12:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 17:12:22] 
[2025-12-19 17:12:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 17:12:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 17:12:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 17:12:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 17:12:22] 
[2025-12-19 17:12:22] 2025-12-20 01:11:30,486 | INFO     | ***************************************
[2025-12-19 17:12:22] 2025-12-20 01:11:30,989 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-19 17:12:22] 2025-12-20 01:11:31,059 | INFO     | sufficient remaining disk space (1946960265216 B)
[2025-12-19 17:12:22] 2025-12-20 01:11:31,059 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 17:12:22] 2025-12-20 01:11:31,059 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 17:12:22] 2025-12-20 01:11:31,059 | INFO     | update_server=False
[2025-12-19 17:12:22] 2025-12-20 01:11:31,059 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 17:12:22] 2025-12-20 01:11:31,095 | INFO     | all data control threads have been joined
[2025-12-19 17:12:22] 2025-12-20 01:11:31,297 | INFO     | all job control threads have been joined
[2025-12-19 17:12:22] 2025-12-20 01:11:31,899 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 17:12:22] 2025-12-20 01:11:31,971 | INFO     | all payload control threads have been joined
[2025-12-19 17:12:22] 2025-12-20 01:11:32,032 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 17:12:22] 2025-12-20 01:11:32,032 | INFO     | aborting loop
[2025-12-19 17:12:22] 2025-12-20 01:11:32,068 | INFO     | [job] retrieve thread has finished
[2025-12-19 17:12:22] 2025-12-20 01:11:32,082 | INFO     | [data] copytool_in thread has finished
[2025-12-19 17:12:22] 2025-12-20 01:11:32,086 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 17:12:22] 2025-12-20 01:11:32,101 | INFO     | [data] control thread has finished
[2025-12-19 17:12:22] 2025-12-20 01:11:32,297 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 17:12:22] 2025-12-20 01:11:32,303 | INFO     | [job] control thread has finished
[2025-12-19 17:12:22] 2025-12-20 01:11:32,751 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 17:12:22] 2025-12-20 01:11:32,774 | INFO     | [payload] validate_post thread has finished
[2025-12-19 17:12:22] 2025-12-20 01:11:32,976 | INFO     | [payload] control thread has finished
[2025-12-19 17:12:22] 2025-12-20 01:11:33,038 | INFO     | [job] job monitor thread has finished
[2025-12-19 17:12:22] 2025-12-20 01:11:33,229 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 17:12:22] 2025-12-20 01:11:33,236 | INFO     | [payload] failed_post thread has finished
[2025-12-19 17:12:22] 2025-12-20 01:11:33,247 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 17:12:22] 2025-12-20 01:11:33,272 | INFO     | [job] validate thread has finished
[2025-12-19 17:12:22] 2025-12-20 01:11:33,876 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 17:12:22] 2025-12-20 01:11:33,906 | INFO     | [data] copytool_out thread has finished
[2025-12-19 17:12:22] 2025-12-20 01:11:34,882 | INFO     | [job] queue monitor thread has finished
[2025-12-19 17:12:22] 2025-12-20 01:11:36,759 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 17:12:22] 2025-12-20 01:11:59,562 | INFO     | 257s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-19 17:12:22] 2025-12-20 01:12:00,798 | INFO     | PID=3725504 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-19 17:12:22] 2025-12-20 01:12:00,798 | INFO     | .. there are 27 such processes running
[2025-12-19 17:12:22] 2025-12-20 01:12:00,798 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 17:12:22] 2025-12-20 01:12:00,798 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 17:12:22] 2025-12-20 01:12:00,798 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 17:12:22] 2025-12-20 01:12:15,854 | INFO     | [monitor] cgroup control has ended
[2025-12-19 17:12:22] 2025-12-20 01:12:16,862 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140165886445376)>', '<ExcThread(monitor, started 140165485934336)>']
[2025-12-19 17:12:22] 2025-12-20 01:12:16,917 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 17:12:22] 2025-12-20 01:12:16,917 | INFO     | [monitor] control thread has ended
[2025-12-19 17:12:22] 2025-12-20 01:12:21,894 | INFO     | all workflow threads have been joined
[2025-12-19 17:12:22] 2025-12-20 01:12:21,894 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 17:12:22] 2025-12-20 01:12:21,895 | INFO     | traces error code: 0
[2025-12-19 17:12:22] 2025-12-20 01:12:21,895 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 17:12:22] 2025-12-20 01:12:22,127 [wrapper] ==== pilot stdout END ====
[2025-12-19 17:12:22] 2025-12-20 01:12:22,135 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 17:12:22] 2025-12-20 01:12:22,147 [wrapper] pilotpid: 3725504
[2025-12-19 17:12:22] 2025-12-20 01:12:22,149 [wrapper] Pilot exit status: 0
[2025-12-19 17:12:22] 2025-12-20 01:12:22,222 [wrapper] pandaids: 6935455981
[2025-12-19 17:12:22] 2025-12-20 01:12:22,407 [wrapper] cleanup supervisor_pilot 3725510 3725505
[2025-12-19 17:12:22] 2025-12-20 01:12:22,410 [wrapper] Test setup, not cleaning
[2025-12-19 17:12:22] 2025-12-20 01:12:22,412 [wrapper] apfmon messages muted
[2025-12-19 17:12:22] 2025-12-20 01:12:22,428 [wrapper] ==== wrapper stdout END ====
[2025-12-19 17:12:22] 2025-12-20 01:12:22,439 [wrapper] ==== wrapper stderr END ====
[2025-12-19 17:12:22]  *** Error codes and diagnostics ***
[2025-12-19 17:12:22]     "exeErrorCode": 65,
[2025-12-19 17:12:22]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-19 17:12:22]     "pilotErrorCode": 1305,
[2025-12-19 17:12:22]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-19 17:12:22]  *** Listing of results directory ***
[2025-12-19 17:12:22] total 249616
[2025-12-19 17:12:22] -rw-r--r--. 1 boinc boinc    579449 Dec 19 08:45 pilot3.tar.gz
[2025-12-19 17:12:22] -rwx------. 1 boinc boinc     36322 Dec 19 08:46 runpilot2-wrapper.sh
[2025-12-19 17:12:22] -rw-r--r--. 1 boinc boinc      5112 Dec 19 08:50 queuedata.json
[2025-12-19 17:12:22] -rw-r--r--. 1 boinc boinc       100 Dec 19 17:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 17:12:22] -rwxr-xr-x. 1 boinc boinc      7986 Dec 19 17:06 run_atlas
[2025-12-19 17:12:22] -rw-r--r--. 1 boinc boinc       105 Dec 19 17:06 job.xml
[2025-12-19 17:12:22] -rw-r--r--. 1 boinc boinc      6596 Dec 19 17:06 init_data.xml
[2025-12-19 17:12:22] -rw-r--r--. 2 boinc boinc 251465997 Dec 19 17:06 EVNT.47929286._000072.pool.root.1
[2025-12-19 17:12:22] -rw-r--r--. 2 boinc boinc     15847 Dec 19 17:06 start_atlas.sh
[2025-12-19 17:12:22] drwxrwx--x. 2 boinc boinc      4096 Dec 19 17:06 shared
[2025-12-19 17:12:22] -rw-r--r--. 2 boinc boinc    592404 Dec 19 17:06 input.tar.gz
[2025-12-19 17:12:22] -rw-r--r--. 1 boinc boinc         0 Dec 19 17:06 boinc_lockfile
[2025-12-19 17:12:22] -rw-r--r--. 1 boinc boinc      2548 Dec 19 17:06 pandaJob.out
[2025-12-19 17:12:22] -rw-------. 1 boinc boinc    988146 Dec 19 17:07 agis_schedconf.cvmfs.json
[2025-12-19 17:12:22] -rw-------. 1 boinc boinc   1516240 Dec 19 17:07 agis_ddmendpoints.agis.ALL.json
[2025-12-19 17:12:22] drwx------. 5 boinc boinc      4096 Dec 19 17:07 pilot3
[2025-12-19 17:12:22] -rw-------. 1 boinc boinc       951 Dec 19 17:09 memory_monitor_summary.json
[2025-12-19 17:12:22] -rw-------. 1 boinc boinc     22493 Dec 19 17:09 log.47929288._001793.job.log.tgz.1
[2025-12-19 17:12:22] -rw-------. 1 boinc boinc        95 Dec 19 17:11 pilot_heartbeat.json
[2025-12-19 17:12:22] -rw-------. 1 boinc boinc      8391 Dec 19 17:11 heartbeat.json
[2025-12-19 17:12:22] -rw-r--r--. 1 boinc boinc       523 Dec 19 17:12 boinc_task_state.xml
[2025-12-19 17:12:22] -rw-r--r--. 1 boinc boinc      8192 Dec 19 17:12 boinc_mmap_file
[2025-12-19 17:12:22] -rw-r--r--. 1 boinc boinc        22 Dec 19 17:12 wrapper_checkpoint.txt
[2025-12-19 17:12:22] -rw-------. 1 boinc boinc      4937 Dec 19 17:12 pilotlog.txt
[2025-12-19 17:12:22] -rw-------. 1 boinc boinc     91987 Dec 19 17:12 log.47929288._001793.job.log.1
[2025-12-19 17:12:22] -rw-------. 1 boinc boinc       188 Dec 19 17:12 output.list
[2025-12-19 17:12:22] -rw-r--r--. 1 boinc boinc       620 Dec 19 17:12 runtime_log
[2025-12-19 17:12:22] -rw-------. 1 boinc boinc    133120 Dec 19 17:12 result.tar.gz
[2025-12-19 17:12:22] -rw-r--r--. 1 boinc boinc      8636 Dec 19 17:12 runtime_log.err
[2025-12-19 17:12:22] -rw-------. 1 boinc boinc       644 Dec 19 17:12 CuPKDmpnsq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5ZgKDm1OB8Bo.diag
[2025-12-19 17:12:22] -rw-r--r--. 1 boinc boinc     21865 Dec 19 17:12 stderr.txt
[2025-12-19 17:12:22] No HITS result produced
[2025-12-19 17:12:22]  *** Contents of shared directory: ***
[2025-12-19 17:12:22] total 246304
[2025-12-19 17:12:22] -rw-r--r--. 2 boinc boinc 251465997 Dec 19 17:06 ATLAS.root_0
[2025-12-19 17:12:22] -rw-r--r--. 2 boinc boinc     15847 Dec 19 17:06 start_atlas.sh
[2025-12-19 17:12:22] -rw-r--r--. 2 boinc boinc    592404 Dec 19 17:06 input.tar.gz
[2025-12-19 17:12:22] -rw-------. 1 boinc boinc    133120 Dec 19 17:12 result.tar.gz
17:12:24 (3721794): run_atlas exited; CPU time 26.578480
17:12:24 (3721794): called boinc_finish(0)

</stderr_txt>
]]>

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