Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:06:20 (3398884): wrapper (7.7.26015): starting
05:06:20 (3398884): wrapper: running run_atlas (--nthreads 4)
[2025-12-20 05:06:20] Arguments: --nthreads 4
[2025-12-20 05:06:20] Threads: 4
[2025-12-20 05:06:20] Checking for CVMFS
[2025-12-20 05:06:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-20 05:06:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-20 05:06:20] Running cvmfs_config stat atlas.cern.ch
[2025-12-20 05:06:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-20 05:06:20] 2.9.2.0 639704 9851 105692 154211 0 57 20313613 36864001 0 130560 0 6781166 99.990 354896 18094 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-20 05:06:20] CVMFS is ok
[2025-12-20 05:06:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-20 05:06:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-20 05:06:20] Further information can be found at the LHC@home message board.
[2025-12-20 05:06:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-20 05:06:20] Checking for apptainer binary...
[2025-12-20 05:06:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-20 05:06:20] Running /usr/bin/apptainer --version
[2025-12-20 05:06:20] apptainer version 1.4.1-1.1
[2025-12-20 05:06:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-20 05:06:20] thA309
[2025-12-20 05:06:20] apptainer works
[2025-12-20 05:06:20] Set ATHENA_PROC_NUMBER=4
[2025-12-20 05:06:20] Set ATHENA_CORE_NUMBER=4
[2025-12-20 05:06:20] Starting ATLAS job with PandaID=6935288626
[2025-12-20 05:06:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-20 06:18:41]  *** The last 200 lines of the pilot log: ***
[2025-12-20 06:18:41] 2025-12-20 05:17:38,197 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-20 06:18:41] 2025-12-20 05:17:38,197 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-20 06:18:41] 2025-12-20 05:17:38,376 | INFO     | all payload control threads have been joined
[2025-12-20 06:18:41] 2025-12-20 05:17:38,535 | INFO     | all job control threads have been joined
[2025-12-20 06:18:41] 2025-12-20 05:17:38,819 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-20 06:18:41] 2025-12-20 05:17:39,202 | INFO     | [job] queue monitor thread has finished
[2025-12-20 06:18:41] 2025-12-20 05:17:39,202 | INFO     | [job] retrieve thread has finished
[2025-12-20 06:18:41] 2025-12-20 05:17:39,203 | INFO     | [job] job monitor thread has finished
[2025-12-20 06:18:41] 2025-12-20 05:17:39,218 | INFO     | [job] create_data_payload thread has finished
[2025-12-20 06:18:41] 2025-12-20 05:17:39,219 | INFO     | all data control threads have been joined
[2025-12-20 06:18:41] 2025-12-20 05:17:39,271 | INFO     | [payload] validate_pre thread has finished
[2025-12-20 06:18:41] 2025-12-20 05:17:39,382 | INFO     | [payload] control thread has finished
[2025-12-20 06:18:41] 2025-12-20 05:17:39,392 | INFO     | [payload] execute_payloads thread has finished
[2025-12-20 06:18:41] 2025-12-20 05:17:39,541 | INFO     | [job] control thread has finished
[2025-12-20 06:18:41] 2025-12-20 05:17:39,688 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-20 06:18:41] 2025-12-20 05:17:39,848 | INFO     | [data] copytool_in thread has finished
[2025-12-20 06:18:41] 2025-12-20 05:17:40,131 | INFO     | [payload] validate_post thread has finished
[2025-12-20 06:18:41] 2025-12-20 05:17:40,224 | INFO     | [data] control thread has finished
[2025-12-20 06:18:41] 2025-12-20 05:17:40,296 | INFO     | [payload] failed_post thread has finished
[2025-12-20 06:18:41] 2025-12-20 05:17:40,603 | INFO     | [job] validate thread has finished
[2025-12-20 06:18:41] 2025-12-20 05:17:40,825 | INFO     | [data] copytool_out thread has finished
[2025-12-20 06:18:41] 2025-12-20 05:17:41,278 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-20 06:18:41] 2025-12-20 05:17:45,285 | INFO     | [data] queue_monitor thread has finished
[2025-12-20 06:18:41] 2025-12-20 05:18:33,920 | INFO     | [monitor] cgroup control has ended
[2025-12-20 06:18:41] 2025-12-20 05:18:35,873 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140450477422400)>', '<ExcThread(monitor, started 140449247389440)>']
[2025-12-20 06:18:41] 2025-12-20 05:18:36,499 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-20 06:18:41] 2025-12-20 05:18:36,499 | INFO     | [monitor] control thread has ended
[2025-12-20 06:18:41] 2025-12-20 05:18:40,898 | INFO     | all workflow threads have been joined
[2025-12-20 06:18:41] 2025-12-20 05:18:40,898 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-20 06:18:41] 2025-12-20 05:18:40,899 | INFO     | traces error code: 0
[2025-12-20 06:18:41] 2025-12-20 05:18:40,899 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-20 06:18:41] 2025-12-20 05:18:40,981 [wrapper] ==== pilot stdout END ====
[2025-12-20 06:18:41] 2025-12-20 05:18:40,985 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-20 06:18:41] 2025-12-20 05:18:40,989 [wrapper] pilotpid: 3402680
[2025-12-20 06:18:41] 2025-12-20 05:18:40,993 [wrapper] Pilot exit status: 0
[2025-12-20 06:18:41] 2025-12-20 05:18:41,005 [wrapper] pandaids: 6935288626
[2025-12-20 06:18:41] 2025-12-20 05:18:41,030 [wrapper] cleanup supervisor_pilot 3421055 3402681
[2025-12-20 06:18:41] 2025-12-20 05:18:41,034 [wrapper] Test setup, not cleaning
[2025-12-20 06:18:41] 2025-12-20 05:18:41,038 [wrapper] apfmon messages muted
[2025-12-20 06:18:41] 2025-12-20 05:18:41,043 [wrapper] ==== wrapper stdout END ====
[2025-12-20 06:18:41] 2025-12-20 05:18:41,046 [wrapper] ==== wrapper stderr END ====
[2025-12-20 06:18:41]  *** Error codes and diagnostics ***
[2025-12-20 06:18:41]     "exeErrorCode": 0,
[2025-12-20 06:18:41]     "exeErrorDiag": "",
[2025-12-20 06:18:41]     "pilotErrorCode": 0,
[2025-12-20 06:18:41]     "pilotErrorDiag": "",
[2025-12-20 06:18:41]  *** Listing of results directory ***
[2025-12-20 06:18:41] total 433440
[2025-12-20 06:18:41] -rwx------ 1 boinc boinc     36322 Dec 19 14:36 runpilot2-wrapper.sh
[2025-12-20 06:18:41] -rw-r--r-- 1 boinc boinc    579449 Dec 19 14:38 pilot3.tar.gz
[2025-12-20 06:18:41] -rw-r--r-- 1 boinc boinc      5112 Dec 19 14:39 queuedata.json
[2025-12-20 06:18:41] -rw-r--r-- 1 boinc boinc       100 Dec 20 05:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-20 06:18:41] -rwxr-xr-x 1 boinc boinc      7986 Dec 20 05:06 run_atlas
[2025-12-20 06:18:41] -rw-r--r-- 1 boinc boinc       105 Dec 20 05:06 job.xml
[2025-12-20 06:18:41] -rw-r--r-- 2 boinc boinc 254429487 Dec 20 05:06 EVNT.47929286._000020.pool.root.1
[2025-12-20 06:18:41] drwxrwx--x 2 boinc boinc      4096 Dec 20 05:06 shared
[2025-12-20 06:18:41] -rw-r--r-- 2 boinc boinc    592392 Dec 20 05:06 input.tar.gz
[2025-12-20 06:18:41] -rw-r--r-- 2 boinc boinc     15847 Dec 20 05:06 start_atlas.sh
[2025-12-20 06:18:41] -rw-r--r-- 1 boinc boinc         0 Dec 20 05:06 boinc_setup_complete
[2025-12-20 06:18:41] -rw-r--r-- 1 boinc boinc      6377 Dec 20 05:06 init_data.xml
[2025-12-20 06:18:41] -rw-r--r-- 1 boinc boinc         0 Dec 20 05:06 boinc_lockfile
[2025-12-20 06:18:41] -rw-r--r-- 1 boinc boinc      2545 Dec 20 05:06 pandaJob.out
[2025-12-20 06:18:41] -rw------- 1 boinc boinc    988138 Dec 20 05:06 agis_schedconf.cvmfs.json
[2025-12-20 06:18:41] -rw------- 1 boinc boinc   1516240 Dec 20 05:06 agis_ddmendpoints.agis.ALL.json
[2025-12-20 06:18:41] drwx------ 5 boinc boinc      4096 Dec 20 05:06 pilot3
[2025-12-20 06:18:41] -rw------- 1 boinc boinc        95 Dec 20 06:16 pilot_heartbeat.json
[2025-12-20 06:18:41] -rw------- 1 boinc boinc 183753359 Dec 20 06:17 HITS.47929288._000378.pool.root.1
[2025-12-20 06:18:41] -rw-r--r-- 1 boinc boinc       529 Dec 20 06:17 boinc_task_state.xml
[2025-12-20 06:18:41] -rw------- 1 boinc boinc      1020 Dec 20 06:17 memory_monitor_summary.json
[2025-12-20 06:18:41] -rw------- 1 boinc boinc    246074 Dec 20 06:17 log.47929288._000378.job.log.tgz.1
[2025-12-20 06:18:41] -rw------- 1 boinc boinc      7750 Dec 20 06:17 heartbeat.json
[2025-12-20 06:18:41] -rw-r--r-- 1 boinc boinc      8192 Dec 20 06:18 boinc_mmap_file
[2025-12-20 06:18:41] -rw-r--r-- 1 boinc boinc        27 Dec 20 06:18 wrapper_checkpoint.txt
[2025-12-20 06:18:41] -rw------- 1 boinc boinc      4556 Dec 20 06:18 pilotlog.txt
[2025-12-20 06:18:41] -rw------- 1 boinc boinc    634296 Dec 20 06:18 log.47929288._000378.job.log.1
[2025-12-20 06:18:41] -rw------- 1 boinc boinc       357 Dec 20 06:18 output.list
[2025-12-20 06:18:41] -rw-r--r-- 1 boinc boinc       620 Dec 20 06:18 runtime_log
[2025-12-20 06:18:41] -rw------- 1 boinc boinc    901120 Dec 20 06:18 result.tar.gz
[2025-12-20 06:18:41] -rw-r--r-- 1 boinc boinc      8897 Dec 20 06:18 runtime_log.err
[2025-12-20 06:18:41] -rw------- 1 boinc boinc       658 Dec 20 06:18 SuZLDmzppq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjGgKDmV18U7m.diag
[2025-12-20 06:18:41] -rw-r--r-- 1 boinc boinc      6557 Dec 20 06:18 stderr.txt
[2025-12-20 06:18:41] HITS file was successfully produced:
[2025-12-20 06:18:41] -rw------- 1 boinc boinc 183753359 Dec 20 06:17 shared/HITS.pool.root.1
[2025-12-20 06:18:41]  *** Contents of shared directory: ***
[2025-12-20 06:18:41] total 429400
[2025-12-20 06:18:41] -rw-r--r-- 2 boinc boinc 254429487 Dec 20 05:06 ATLAS.root_0
[2025-12-20 06:18:41] -rw-r--r-- 2 boinc boinc    592392 Dec 20 05:06 input.tar.gz
[2025-12-20 06:18:41] -rw-r--r-- 2 boinc boinc     15847 Dec 20 05:06 start_atlas.sh
[2025-12-20 06:18:41] -rw------- 1 boinc boinc 183753359 Dec 20 06:17 HITS.pool.root.1
[2025-12-20 06:18:41] -rw------- 1 boinc boinc    901120 Dec 20 06:18 result.tar.gz
06:18:42 (3398884): run_atlas exited; CPU time 16088.657165
06:18:42 (3398884): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN