Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:35:12 (20894): wrapper (7.7.26015): starting
14:35:12 (20894): wrapper: running run_atlas (--nthreads 8)
[2025-12-19 14:35:12] Arguments: --nthreads 8
[2025-12-19 14:35:12] Threads: 8
[2025-12-19 14:35:12] Checking for CVMFS
[2025-12-19 14:35:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 14:35:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 14:35:12] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 14:35:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 14:35:12] 2.11.2.0 31396 151204 142936 154200 2 188 15472035 18432000 1833 130560 0 113015885 99.979 5978019 35126 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-19 14:35:12] CVMFS is ok
[2025-12-19 14:35:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-19 14:35:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-19 14:35:12] Further information can be found at the LHC@home message board.
[2025-12-19 14:35:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 14:35:12] Checking for apptainer binary...
[2025-12-19 14:35:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 14:35:12] Running /usr/bin/apptainer --version
[2025-12-19 14:35:12] apptainer version 1.3.2-1.el7
[2025-12-19 14:35:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 14:35:13] c-206-10.aglt2.org
[2025-12-19 14:35:13] apptainer works
[2025-12-19 14:35:13] Set ATHENA_PROC_NUMBER=8
[2025-12-19 14:35:13] Set ATHENA_CORE_NUMBER=8
[2025-12-19 14:35:13] Starting ATLAS job with PandaID=6935322944
[2025-12-19 14:35:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 17:50:48]  *** The last 200 lines of the pilot log: ***
[2025-12-19 17:50:48] 2025-12-19 22:49:37,944 | INFO     | executing command: lscpu
[2025-12-19 17:50:48] 2025-12-19 22:49:37,975 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-19 17:50:48] 2025-12-19 22:49:38,601 | INFO     | monitor loop #843: job 0:6935322944 is in state 'finished'
[2025-12-19 17:50:48] 2025-12-19 22:49:38,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 17:50:48] 2025-12-19 22:49:39,291 | INFO     | time since job start (11656s) is within the limit (174528.0s)
[2025-12-19 17:50:48] 2025-12-19 22:49:41,103 | INFO     | monitor loop #844: job 0:6935322944 is in state 'finished'
[2025-12-19 17:50:48] 2025-12-19 22:49:41,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 17:50:48] 2025-12-19 22:49:41,297 | INFO     | time since job start (11658s) is within the limit (174528.0s)
[2025-12-19 17:50:48] 2025-12-19 22:49:42,201 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-19 17:50:48] 2025-12-19 22:49:42,206 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2527.875
[2025-12-19 17:50:48] 2025-12-19 22:49:42,209 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6935322944/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 17:50:48] 2025-12-19 22:49:42,209 | INFO     | extracted standard info from prmon json
[2025-12-19 17:50:48] 2025-12-19 22:49:42,209 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 17:50:48] 2025-12-19 22:49:42,209 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 17:50:48] 2025-12-19 22:49:42,210 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 17:50:48] 2025-12-19 22:49:42,210 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 17:50:48] 2025-12-19 22:49:42,213 | INFO     | fitting pss+swap vs Time
[2025-12-19 17:50:48] 2025-12-19 22:49:42,213 | INFO     | sum of square deviations: 2160561440.0
[2025-12-19 17:50:48] 2025-12-19 22:49:42,214 | INFO     | sum of deviations: 18165732534.0
[2025-12-19 17:50:48] 2025-12-19 22:49:42,214 | INFO     | mean x: 1766178744.0
[2025-12-19 17:50:48] 2025-12-19 22:49:42,214 | INFO     | mean y: 2466133.9842931936
[2025-12-19 17:50:48] 2025-12-19 22:49:42,214 | INFO     | intersect: -14847345621.769367
[2025-12-19 17:50:48] 2025-12-19 22:49:42,215 | INFO     | chi2: 1.4710531982997086
[2025-12-19 17:50:48] 2025-12-19 22:49:42,215 | INFO     | sum of square deviations: 1995283922.5
[2025-12-19 17:50:48] 2025-12-19 22:49:42,216 | INFO     | sum of deviations: 17674095988.500004
[2025-12-19 17:50:48] 2025-12-19 22:49:42,216 | INFO     | mean x: 1766178591.5
[2025-12-19 17:50:48] 2025-12-19 22:49:42,216 | INFO     | mean y: 2465680.306451613
[2025-12-19 17:50:48] 2025-12-19 22:49:42,216 | INFO     | intersect: -15642230098.073298
[2025-12-19 17:50:48] 2025-12-19 22:49:42,216 | INFO     | chi2: 1.4721254828113997
[2025-12-19 17:50:48] 2025-12-19 22:49:42,217 | INFO     | current chi2=1.4721254828113997 (change=-0.07289230008339867 %)
[2025-12-19 17:50:48] 2025-12-19 22:49:42,217 | INFO     | right removable region: 185
[2025-12-19 17:50:48] 2025-12-19 22:49:42,217 | INFO     | sum of square deviations: 1995283922.5
[2025-12-19 17:50:48] 2025-12-19 22:49:42,218 | INFO     | sum of deviations: -11044553311.0
[2025-12-19 17:50:48] 2025-12-19 22:49:42,218 | INFO     | mean x: 1766178896.5
[2025-12-19 17:50:48] 2025-12-19 22:49:42,218 | INFO     | mean y: 2492790.053763441
[2025-12-19 17:50:48] 2025-12-19 22:49:42,218 | INFO     | intersect: 9778874366.22386
[2025-12-19 17:50:48] 2025-12-19 22:49:42,218 | INFO     | chi2: 0.05092624651124785
[2025-12-19 17:50:48] 2025-12-19 22:49:42,219 | INFO     | current chi2=0.05092624651124785 (change=96.53810979982845 %)
[2025-12-19 17:50:48] 2025-12-19 22:49:42,219 | INFO     | sum of square deviations: 1838657730.0
[2025-12-19 17:50:48] 2025-12-19 22:49:42,220 | INFO     | sum of deviations: -11413085115.999998
[2025-12-19 17:50:48] 2025-12-19 22:49:42,220 | INFO     | mean x: 1766179049.0
[2025-12-19 17:50:48] 2025-12-19 22:49:42,220 | INFO     | mean y: 2493112.458563536
[2025-12-19 17:50:48] 2025-12-19 22:49:42,220 | INFO     | intersect: 10965681903.627941
[2025-12-19 17:50:48] 2025-12-19 22:49:42,220 | INFO     | chi2: 0.039412167541227706
[2025-12-19 17:50:48] 2025-12-19 22:49:42,220 | INFO     | current chi2=0.039412167541227706 (change=22.6093218306931 %)
[2025-12-19 17:50:48] 2025-12-19 22:49:42,221 | INFO     | left removable region: 20
[2025-12-19 17:50:48] 2025-12-19 22:49:42,221 | INFO     | sum of square deviations: 1392881930.0
[2025-12-19 17:50:48] 2025-12-19 22:49:42,222 | INFO     | sum of deviations: -6659429353.000001
[2025-12-19 17:50:48] 2025-12-19 22:49:42,222 | INFO     | mean x: 1766179171.0
[2025-12-19 17:50:48] 2025-12-19 22:49:42,222 | INFO     | mean y: 2488418.987878788
[2025-12-19 17:50:48] 2025-12-19 22:49:42,222 | INFO     | intersect: 8446668188.061779
[2025-12-19 17:50:48] 2025-12-19 22:49:42,222 | INFO     | chi2: 0.03379609792602997
[2025-12-19 17:50:48] 2025-12-19 22:49:42,222 | INFO     | current memory leak: -4.78 B/s (using 165 data points, chi2=0.03)
[2025-12-19 17:50:48] 2025-12-19 22:49:42,223 | INFO     | could have reported an average CPU frequency of 2540 MHz (10 samples)
[2025-12-19 17:50:48] 2025-12-19 22:49:42,223 | INFO     | ..............................
[2025-12-19 17:50:48] 2025-12-19 22:49:42,223 | INFO     | . Timing measurements:
[2025-12-19 17:50:48] 2025-12-19 22:49:42,223 | INFO     | . get job = 0 s
[2025-12-19 17:50:48] 2025-12-19 22:49:42,223 | INFO     | . initial setup = 2 s
[2025-12-19 17:50:48] 2025-12-19 22:49:42,223 | INFO     | . payload setup = 4 s
[2025-12-19 17:50:48] 2025-12-19 22:49:42,223 | INFO     | . stage-in = 0 s
[2025-12-19 17:50:48] 2025-12-19 22:49:42,223 | INFO     | . payload execution = 11624 s
[2025-12-19 17:50:48] 2025-12-19 22:49:42,224 | INFO     | . stage-out = 2 s
[2025-12-19 17:50:48] 2025-12-19 22:49:42,224 | INFO     | . log creation = 0 s
[2025-12-19 17:50:48] 2025-12-19 22:49:42,224 | INFO     | ..............................
[2025-12-19 17:50:48] 2025-12-19 22:49:42,307 | INFO     | 
[2025-12-19 17:50:48] 2025-12-19 22:49:42,307 | INFO     | job summary report
[2025-12-19 17:50:48] 2025-12-19 22:49:42,307 | INFO     | --------------------------------------------------
[2025-12-19 17:50:48] 2025-12-19 22:49:42,307 | INFO     | PanDA job id: 6935322944
[2025-12-19 17:50:48] 2025-12-19 22:49:42,307 | INFO     | task id: 47886933
[2025-12-19 17:50:48] 2025-12-19 22:49:42,308 | INFO     | errors: (none)
[2025-12-19 17:50:48] 2025-12-19 22:49:42,308 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 17:50:48] 2025-12-19 22:49:42,308 | INFO     | pilot state: finished 
[2025-12-19 17:50:48] 2025-12-19 22:49:42,308 | INFO     | transexitcode: 0
[2025-12-19 17:50:48] 2025-12-19 22:49:42,308 | INFO     | exeerrorcode: 0
[2025-12-19 17:50:48] 2025-12-19 22:49:42,308 | INFO     | exeerrordiag: 
[2025-12-19 17:50:48] 2025-12-19 22:49:42,309 | INFO     | exitcode: 0
[2025-12-19 17:50:48] 2025-12-19 22:49:42,309 | INFO     | exitmsg: OK
[2025-12-19 17:50:48] 2025-12-19 22:49:42,309 | INFO     | cpuconsumptiontime: 88497 s
[2025-12-19 17:50:48] 2025-12-19 22:49:42,309 | INFO     | nevents: 400
[2025-12-19 17:50:48] 2025-12-19 22:49:42,309 | INFO     | neventsw: 0
[2025-12-19 17:50:48] 2025-12-19 22:49:42,309 | INFO     | pid: 31055
[2025-12-19 17:50:48] 2025-12-19 22:49:42,310 | INFO     | pgrp: 31055
[2025-12-19 17:50:48] 2025-12-19 22:49:42,310 | INFO     | corecount: 8
[2025-12-19 17:50:48] 2025-12-19 22:49:42,310 | INFO     | event service: False
[2025-12-19 17:50:48] 2025-12-19 22:49:42,310 | INFO     | sizes: {0: 2283798, 1: 2283997, 4: 2284259, 12: 2284287, 11632: 2313722, 11633: 2313721, 11636: 2322903, 11637: 2322959, 11643: 2323153}
[2025-12-19 17:50:48] 2025-12-19 22:49:42,310 | INFO     | --------------------------------------------------
[2025-12-19 17:50:48] 2025-12-19 22:49:42,310 | INFO     | 
[2025-12-19 17:50:48] 2025-12-19 22:49:42,311 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-19 17:50:48] 2025-12-19 22:49:42,330 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 17:50:48] 2025-12-19 22:49:42,330 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 17:50:48] 2025-12-19 22:49:42,330 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 17:50:48] 2025-12-19 22:49:42,330 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 17:50:48] 2025-12-19 22:49:42,331 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 17:50:48] 2025-12-19 22:49:42,331 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 17:50:48] 2025-12-19 22:49:42,331 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 17:50:48] 2025-12-19 22:49:42,331 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 17:50:48] 2025-12-19 22:49:42,331 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 17:50:48] 2025-12-19 22:49:42,331 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 17:50:48] 2025-12-19 22:49:42,332 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 17:50:48] 2025-12-19 22:49:42,332 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 17:50:48] 2025-12-19 22:49:42,332 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 17:50:48] 2025-12-19 22:49:42,332 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 17:50:48] 2025-12-19 22:49:42,332 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 17:50:48] 2025-12-19 22:49:42,332 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 17:50:48] 2025-12-19 22:49:42,333 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 17:50:48] 2025-12-19 22:49:42,333 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 17:50:48] 2025-12-19 22:49:42,333 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 17:50:48] 2025-12-19 22:49:42,333 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 17:50:48] 2025-12-19 22:49:42,333 | INFO     | job 6935322944 has completed (purged errors)
[2025-12-19 17:50:48] 2025-12-19 22:49:42,334 | INFO     | overall cleanup function is called
[2025-12-19 17:50:48] 2025-12-19 22:49:43,342 | INFO     | --- collectZombieJob: --- 10, [31055]
[2025-12-19 17:50:48] 2025-12-19 22:49:43,342 | INFO     | zombie collector waiting for pid 31055
[2025-12-19 17:50:48] 2025-12-19 22:49:43,342 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 17:50:48] 2025-12-19 22:49:43,343 | INFO     | collected zombie processes
[2025-12-19 17:50:48] 2025-12-19 22:49:43,343 | INFO     | will attempt to kill all subprocesses of pid=31055
[2025-12-19 17:50:48] 2025-12-19 22:49:43,508 | INFO     | process IDs to be killed: [31055] (in reverse order)
[2025-12-19 17:50:48] 2025-12-19 22:49:43,563 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 17:50:48] 2025-12-19 22:49:43,563 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 17:50:48] 2025-12-19 22:49:43,566 | INFO     | did not find any defunct processes belonging to 31055
[2025-12-19 17:50:48] 2025-12-19 22:49:43,568 | INFO     | did not find any defunct processes belonging to 31055
[2025-12-19 17:50:48] 2025-12-19 22:49:43,568 | INFO     | ready for new job
[2025-12-19 17:50:48] 2025-12-19 22:49:43,569 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 17:50:48] 2025-12-19 22:49:43,570 | INFO     | ***************************************
[2025-12-19 17:50:48] 2025-12-19 22:49:43,570 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 17:50:48] 2025-12-19 22:49:43,570 | INFO     | ***************************************
[2025-12-19 17:50:48] 2025-12-19 22:49:43,570 | INFO     | 
[2025-12-19 17:50:48] 2025-12-19 22:49:43,571 | INFO     | architecture information:
[2025-12-19 17:50:48] 2025-12-19 22:49:43,571 | INFO     | executing command: cat /etc/os-release
[2025-12-19 17:50:48] 2025-12-19 22:49:43,582 | INFO     | cat /etc/os-release:
[2025-12-19 17:50:48] NAME="CentOS Linux"
[2025-12-19 17:50:48] VERSION="7 (Core)"
[2025-12-19 17:50:48] ID="centos"
[2025-12-19 17:50:48] ID_LIKE="rhel fedora"
[2025-12-19 17:50:48] VERSION_ID="7"
[2025-12-19 17:50:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 17:50:48] ANSI_COLOR="0;31"
[2025-12-19 17:50:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 17:50:48] HOME_URL="https://www.centos.org/"
[2025-12-19 17:50:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 17:50:48] 
[2025-12-19 17:50:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 17:50:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 17:50:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 17:50:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 17:50:48] 
[2025-12-19 17:50:48] 2025-12-19 22:49:43,582 | INFO     | ***************************************
[2025-12-19 17:50:48] 2025-12-19 22:49:44,085 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-19 17:50:48] 2025-12-19 22:49:44,099 | INFO     | sufficient remaining disk space (27949793280 B)
[2025-12-19 17:50:48] 2025-12-19 22:49:44,100 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 17:50:48] 2025-12-19 22:49:44,100 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 17:50:48] 2025-12-19 22:49:44,100 | INFO     | update_server=False
[2025-12-19 17:50:48] 2025-12-19 22:49:44,100 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 17:50:48] 2025-12-19 22:49:44,101 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 17:50:48] 2025-12-19 22:49:44,101 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 17:50:48] 2025-12-19 22:49:44,579 | INFO     | all payload control threads have been joined
[2025-12-19 17:50:48] 2025-12-19 22:49:44,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 17:50:48] 2025-12-19 22:49:44,612 | INFO     | aborting loop
[2025-12-19 17:50:48] 2025-12-19 22:49:44,789 | INFO     | all job control threads have been joined
[2025-12-19 17:50:48] 2025-12-19 22:49:45,104 | INFO     | [job] retrieve thread has finished
[2025-12-19 17:50:48] 2025-12-19 22:49:45,106 | INFO     | [job] queue monitor thread has finished
[2025-12-19 17:50:48] 2025-12-19 22:49:45,113 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 17:50:48] 2025-12-19 22:49:45,205 | INFO     | all data control threads have been joined
[2025-12-19 17:50:48] 2025-12-19 22:49:45,209 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 17:50:48] 2025-12-19 22:49:45,266 | INFO     | [data] copytool_in thread has finished
[2025-12-19 17:50:48] 2025-12-19 22:49:45,340 | INFO     | [payload] failed_post thread has finished
[2025-12-19 17:50:48] 2025-12-19 22:49:45,341 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 17:50:48] 2025-12-19 22:49:45,585 | INFO     | [payload] control thread has finished
[2025-12-19 17:50:48] 2025-12-19 22:49:45,618 | INFO     | [job] job monitor thread has finished
[2025-12-19 17:50:48] 2025-12-19 22:49:45,797 | INFO     | [job] control thread has finished
[2025-12-19 17:50:48] 2025-12-19 22:49:45,852 | INFO     | [payload] validate_post thread has finished
[2025-12-19 17:50:48] 2025-12-19 22:49:45,856 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 17:50:48] 2025-12-19 22:49:46,104 | INFO     | [data] copytool_out thread has finished
[2025-12-19 17:50:48] 2025-12-19 22:49:46,161 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 17:50:48] 2025-12-19 22:49:46,207 | INFO     | [data] control thread has finished
[2025-12-19 17:50:48] 2025-12-19 22:49:46,528 | INFO     | [job] validate thread has finished
[2025-12-19 17:50:48] 2025-12-19 22:49:50,168 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 17:50:48] 2025-12-19 22:50:14,553 | INFO     | PID=24573 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-19 17:50:48] 2025-12-19 22:50:14,553 | INFO     | .. there are 3 such processes running
[2025-12-19 17:50:48] 2025-12-19 22:50:14,554 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 17:50:48] 2025-12-19 22:50:14,554 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 17:50:48] 2025-12-19 22:50:14,554 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 17:50:48] 2025-12-19 22:50:21,598 [wrapper] supervise_pilot (15 min periods counter: 14)
[2025-12-19 17:50:48] 2025-12-19 22:50:42,353 | INFO     | [monitor] cgroup control has ended
[2025-12-19 17:50:48] 2025-12-19 22:50:43,608 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140468048369472)>', '<ExcThread(monitor, started 140467601647360)>']
[2025-12-19 17:50:48] 2025-12-19 22:50:43,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 17:50:48] 2025-12-19 22:50:43,701 | INFO     | [monitor] control thread has ended
[2025-12-19 17:50:48] 2025-12-19 22:50:48,625 | INFO     | all workflow threads have been joined
[2025-12-19 17:50:48] 2025-12-19 22:50:48,634 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 17:50:48] 2025-12-19 22:50:48,634 | INFO     | traces error code: 0
[2025-12-19 17:50:48] 2025-12-19 22:50:48,635 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 17:50:48] 2025-12-19 22:50:48,749 [wrapper] ==== pilot stdout END ====
[2025-12-19 17:50:48] 2025-12-19 22:50:48,751 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 17:50:48] 2025-12-19 22:50:48,754 [wrapper] pilotpid: 24573
[2025-12-19 17:50:48] 2025-12-19 22:50:48,756 [wrapper] Pilot exit status: 0
[2025-12-19 17:50:48] 2025-12-19 22:50:48,765 [wrapper] pandaids: 6935322944
[2025-12-19 17:50:48] 2025-12-19 22:50:48,806 [wrapper] cleanup supervisor_pilot 29231 24574
[2025-12-19 17:50:48] 2025-12-19 22:50:48,813 [wrapper] Test setup, not cleaning
[2025-12-19 17:50:48] 2025-12-19 22:50:48,815 [wrapper] apfmon messages muted
[2025-12-19 17:50:48] 2025-12-19 22:50:48,818 [wrapper] ==== wrapper stdout END ====
[2025-12-19 17:50:48] 2025-12-19 22:50:48,823 [wrapper] ==== wrapper stderr END ====
[2025-12-19 17:50:48]  *** Error codes and diagnostics ***
[2025-12-19 17:50:48]     "exeErrorCode": 0,
[2025-12-19 17:50:48]     "exeErrorDiag": "",
[2025-12-19 17:50:48]     "pilotErrorCode": 0,
[2025-12-19 17:50:48]     "pilotErrorDiag": "",
[2025-12-19 17:50:48]  *** Listing of results directory ***
[2025-12-19 17:50:48] total 339060
[2025-12-19 17:50:48] -rw-r--r-- 1 boincer umatlas    579449 Dec 19 08:33 pilot3.tar.gz
[2025-12-19 17:50:48] -rwx------ 1 boincer umatlas     36322 Dec 19 08:34 runpilot2-wrapper.sh
[2025-12-19 17:50:48] -rw-r--r-- 1 boincer umatlas      5112 Dec 19 08:34 queuedata.json
[2025-12-19 17:50:48] -rw-r--r-- 1 boincer umatlas       100 Dec 19 14:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 17:50:48] -rwxr-xr-x 1 boincer umatlas      7986 Dec 19 14:35 run_atlas
[2025-12-19 17:50:48] -rw-r--r-- 1 boincer umatlas       105 Dec 19 14:35 job.xml
[2025-12-19 17:50:48] -rw-r--r-- 2 boincer umatlas 192178140 Dec 19 14:35 EVNT.47886929._000728.pool.root.1
[2025-12-19 17:50:48] -rw-r--r-- 2 boincer umatlas     15847 Dec 19 14:35 start_atlas.sh
[2025-12-19 17:50:48] drwxrwx--x 2 boincer umatlas      4096 Dec 19 14:35 shared
[2025-12-19 17:50:48] -rw-r--r-- 2 boincer umatlas    592403 Dec 19 14:35 input.tar.gz
[2025-12-19 17:50:48] -rw-r--r-- 1 boincer umatlas         0 Dec 19 14:35 boinc_lockfile
[2025-12-19 17:50:48] -rw-r--r-- 1 boincer umatlas      2515 Dec 19 14:35 pandaJob.out
[2025-12-19 17:50:48] -rw------- 1 boincer umatlas        57 Dec 19 14:35 setup.sh.local
[2025-12-19 17:50:48] -rw------- 1 boincer umatlas    988154 Dec 19 14:35 agis_schedconf.cvmfs.json
[2025-12-19 17:50:48] drwx------ 5 boincer umatlas      4096 Dec 19 14:35 pilot3
[2025-12-19 17:50:48] -rw-r--r-- 1 boincer umatlas      5952 Dec 19 17:45 init_data.xml
[2025-12-19 17:50:48] -rw------- 1 boincer umatlas 146964184 Dec 19 17:49 HITS.47886933._017780.pool.root.1
[2025-12-19 17:50:48] -rw-r--r-- 1 boincer umatlas       530 Dec 19 17:49 boinc_task_state.xml
[2025-12-19 17:50:48] -rw------- 1 boincer umatlas      1051 Dec 19 17:49 memory_monitor_summary.json
[2025-12-19 17:50:48] -rw------- 1 boincer umatlas        95 Dec 19 17:49 pilot_heartbeat.json
[2025-12-19 17:50:48] -rw------- 1 boincer umatlas   1516240 Dec 19 17:49 agis_ddmendpoints.agis.ALL.json
[2025-12-19 17:50:48] -rw------- 1 boincer umatlas    439020 Dec 19 17:49 log.47886933._017780.job.log.tgz.1
[2025-12-19 17:50:48] -rw------- 1 boincer umatlas      7851 Dec 19 17:49 heartbeat.json
[2025-12-19 17:50:48] -rw-r--r-- 1 boincer umatlas      8192 Dec 19 17:50 boinc_mmap_file
[2025-12-19 17:50:48] -rw-r--r-- 1 boincer umatlas        28 Dec 19 17:50 wrapper_checkpoint.txt
[2025-12-19 17:50:48] -rw------- 1 boincer umatlas      4821 Dec 19 17:50 pilotlog.txt
[2025-12-19 17:50:48] -rw------- 1 boincer umatlas   1633683 Dec 19 17:50 log.47886933._017780.job.log.1
[2025-12-19 17:50:48] -rw------- 1 boincer umatlas       357 Dec 19 17:50 output.list
[2025-12-19 17:50:48] -rw-r--r-- 1 boincer umatlas       620 Dec 19 17:50 runtime_log
[2025-12-19 17:50:48] -rw------- 1 boincer umatlas   2088960 Dec 19 17:50 result.tar.gz
[2025-12-19 17:50:48] -rw-r--r-- 1 boincer umatlas      9343 Dec 19 17:50 runtime_log.err
[2025-12-19 17:50:48] -rw------- 1 boincer umatlas       661 Dec 19 17:50 ac3MDmqnpq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbAgKDm9CsaAo.diag
[2025-12-19 17:50:48] -rw-r--r-- 1 boincer umatlas     21362 Dec 19 17:50 stderr.txt
[2025-12-19 17:50:48] HITS file was successfully produced:
[2025-12-19 17:50:48] -rw------- 1 boincer umatlas 146964184 Dec 19 17:49 shared/HITS.pool.root.1
[2025-12-19 17:50:48]  *** Contents of shared directory: ***
[2025-12-19 17:50:48] total 333836
[2025-12-19 17:50:48] -rw-r--r-- 2 boincer umatlas 192178140 Dec 19 14:35 ATLAS.root_0
[2025-12-19 17:50:48] -rw-r--r-- 2 boincer umatlas     15847 Dec 19 14:35 start_atlas.sh
[2025-12-19 17:50:48] -rw-r--r-- 2 boincer umatlas    592403 Dec 19 14:35 input.tar.gz
[2025-12-19 17:50:48] -rw------- 1 boincer umatlas 146964184 Dec 19 17:49 HITS.pool.root.1
[2025-12-19 17:50:48] -rw------- 1 boincer umatlas   2088960 Dec 19 17:50 result.tar.gz
17:50:50 (20894): run_atlas exited; CPU time 88645.200921
17:50:50 (20894): called boinc_finish(0)

</stderr_txt>
]]>

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