Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:02:33 (1134): wrapper (7.7.26015): starting
14:02:33 (1134): wrapper: running run_atlas (--nthreads 8)
[2025-12-19 14:02:33] Arguments: --nthreads 8
[2025-12-19 14:02:33] Threads: 8
[2025-12-19 14:02:33] Checking for CVMFS
[2025-12-19 14:02:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 14:02:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 14:02:33] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 14:02:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 14:02:33] 2.11.2.0 31396 151171 139552 154198 3 57 15465022 18432000 1833 130560 0 112866354 99.979 5975274 35125 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-19 14:02:33] CVMFS is ok
[2025-12-19 14:02:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-19 14:02:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-19 14:02:33] Further information can be found at the LHC@home message board.
[2025-12-19 14:02:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 14:02:33] Checking for apptainer binary...
[2025-12-19 14:02:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 14:02:33] Running /usr/bin/apptainer --version
[2025-12-19 14:02:33] apptainer version 1.3.2-1.el7
[2025-12-19 14:02:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 14:02:34] c-206-10.aglt2.org
[2025-12-19 14:02:34] apptainer works
[2025-12-19 14:02:34] Set ATHENA_PROC_NUMBER=8
[2025-12-19 14:02:34] Set ATHENA_CORE_NUMBER=8
[2025-12-19 14:02:34] Starting ATLAS job with PandaID=6935103065
[2025-12-19 14:02:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 17:05:10]  *** The last 200 lines of the pilot log: ***
[2025-12-19 17:05:10] 2025-12-19 22:04:32,691 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6935103065/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 17:05:10] 2025-12-19 22:04:32,692 | INFO     | extracted standard info from prmon json
[2025-12-19 17:05:10] 2025-12-19 22:04:32,692 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 17:05:10] 2025-12-19 22:04:32,692 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 17:05:10] 2025-12-19 22:04:32,693 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 17:05:10] 2025-12-19 22:04:32,693 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 17:05:10] 2025-12-19 22:04:32,696 | INFO     | fitting pss+swap vs Time
[2025-12-19 17:05:10] 2025-12-19 22:04:32,696 | INFO     | sum of square deviations: 1778377530.0
[2025-12-19 17:05:10] 2025-12-19 22:04:32,697 | INFO     | sum of deviations: 25847679999.000008
[2025-12-19 17:05:10] 2025-12-19 22:04:32,697 | INFO     | mean x: 1766176419.0
[2025-12-19 17:05:10] 2025-12-19 22:04:32,698 | INFO     | mean y: 2465736.290502793
[2025-12-19 17:05:10] 2025-12-19 22:04:32,698 | INFO     | intersect: -25667878231.726093
[2025-12-19 17:05:10] 2025-12-19 22:04:32,698 | INFO     | chi2: 2.165426918197694
[2025-12-19 17:05:10] 2025-12-19 22:04:32,698 | INFO     | sum of square deviations: 1633472487.5
[2025-12-19 17:05:10] 2025-12-19 22:04:32,699 | INFO     | sum of deviations: 36746683741.5
[2025-12-19 17:05:10] 2025-12-19 22:04:32,700 | INFO     | mean x: 1766176266.5
[2025-12-19 17:05:10] 2025-12-19 22:04:32,700 | INFO     | mean y: 2476922.0172413792
[2025-12-19 17:05:10] 2025-12-19 22:04:32,700 | INFO     | intersect: -39729518072.36966
[2025-12-19 17:05:10] 2025-12-19 22:04:32,700 | INFO     | chi2: 1.3825872254873586
[2025-12-19 17:05:10] 2025-12-19 22:04:32,700 | INFO     | current chi2=1.3825872254873586 (change=36.1517484673138 %)
[2025-12-19 17:05:10] 2025-12-19 22:04:32,701 | INFO     | sum of square deviations: 1496660620.0
[2025-12-19 17:05:10] 2025-12-19 22:04:32,702 | INFO     | sum of deviations: 35490801132.00001
[2025-12-19 17:05:10] 2025-12-19 22:04:32,702 | INFO     | mean x: 1766176114.0
[2025-12-19 17:05:10] 2025-12-19 22:04:32,702 | INFO     | mean y: 2475521.75147929
[2025-12-19 17:05:10] 2025-12-19 22:04:32,702 | INFO     | intersect: -41879434370.46081
[2025-12-19 17:05:10] 2025-12-19 22:04:32,703 | INFO     | chi2: 1.3823949613070692
[2025-12-19 17:05:10] 2025-12-19 22:04:32,703 | INFO     | current chi2=1.3823949613070692 (change=0.013906115776646166 %)
[2025-12-19 17:05:10] 2025-12-19 22:04:32,703 | INFO     | right removable region: 168
[2025-12-19 17:05:10] 2025-12-19 22:04:32,703 | INFO     | sum of square deviations: 1633472487.5
[2025-12-19 17:05:10] 2025-12-19 22:04:32,704 | INFO     | sum of deviations: -1280183789.500002
[2025-12-19 17:05:10] 2025-12-19 22:04:32,704 | INFO     | mean x: 1766176571.5
[2025-12-19 17:05:10] 2025-12-19 22:04:32,705 | INFO     | mean y: 2493975.695402299
[2025-12-19 17:05:10] 2025-12-19 22:04:32,705 | INFO     | intersect: 1386680506.862179
[2025-12-19 17:05:10] 2025-12-19 22:04:32,705 | INFO     | chi2: 0.8452084976175439
[2025-12-19 17:05:10] 2025-12-19 22:04:32,705 | INFO     | current chi2=0.8452084976175439 (change=60.968043275225405 %)
[2025-12-19 17:05:10] 2025-12-19 22:04:32,706 | INFO     | sum of square deviations: 1496660620.0
[2025-12-19 17:05:10] 2025-12-19 22:04:32,706 | INFO     | sum of deviations: -6151775702.0
[2025-12-19 17:05:10] 2025-12-19 22:04:32,707 | INFO     | mean x: 1766176724.0
[2025-12-19 17:05:10] 2025-12-19 22:04:32,707 | INFO     | mean y: 2499344.2662721896
[2025-12-19 17:05:10] 2025-12-19 22:04:32,707 | INFO     | intersect: 7262076372.58493
[2025-12-19 17:05:10] 2025-12-19 22:04:32,707 | INFO     | chi2: 0.803705489976602
[2025-12-19 17:05:10] 2025-12-19 22:04:32,708 | INFO     | current chi2=0.803705489976602 (change=4.910386935049726 %)
[2025-12-19 17:05:10] 2025-12-19 22:04:32,708 | INFO     | left removable region: 20
[2025-12-19 17:05:10] 2025-12-19 22:04:32,708 | INFO     | sum of square deviations: 1005179777.0
[2025-12-19 17:05:10] 2025-12-19 22:04:32,709 | INFO     | sum of deviations: 2608740121.499999
[2025-12-19 17:05:10] 2025-12-19 22:04:32,709 | INFO     | mean x: 1766176693.5
[2025-12-19 17:05:10] 2025-12-19 22:04:32,709 | INFO     | mean y: 2514661.128378378
[2025-12-19 17:05:10] 2025-12-19 22:04:32,709 | INFO     | intersect: -4581238521.553944
[2025-12-19 17:05:10] 2025-12-19 22:04:32,710 | INFO     | chi2: 0.0005606051635408803
[2025-12-19 17:05:10] 2025-12-19 22:04:32,710 | INFO     | current memory leak: 2.60 B/s (using 148 data points, chi2=0.00)
[2025-12-19 17:05:10] 2025-12-19 22:04:32,710 | INFO     | could have reported an average CPU frequency of 2523 MHz (9 samples)
[2025-12-19 17:05:10] 2025-12-19 22:04:32,711 | INFO     | ..............................
[2025-12-19 17:05:10] 2025-12-19 22:04:32,711 | INFO     | . Timing measurements:
[2025-12-19 17:05:10] 2025-12-19 22:04:32,711 | INFO     | . get job = 0 s
[2025-12-19 17:05:10] 2025-12-19 22:04:32,711 | INFO     | . initial setup = 2 s
[2025-12-19 17:05:10] 2025-12-19 22:04:32,711 | INFO     | . payload setup = 4 s
[2025-12-19 17:05:10] 2025-12-19 22:04:32,712 | INFO     | . stage-in = 0 s
[2025-12-19 17:05:10] 2025-12-19 22:04:32,712 | INFO     | . payload execution = 10877 s
[2025-12-19 17:05:10] 2025-12-19 22:04:32,712 | INFO     | . stage-out = 2 s
[2025-12-19 17:05:10] 2025-12-19 22:04:32,712 | INFO     | . log creation = 0 s
[2025-12-19 17:05:10] 2025-12-19 22:04:32,712 | INFO     | ..............................
[2025-12-19 17:05:10] 2025-12-19 22:04:32,801 | INFO     | 
[2025-12-19 17:05:10] 2025-12-19 22:04:32,802 | INFO     | job summary report
[2025-12-19 17:05:10] 2025-12-19 22:04:32,802 | INFO     | --------------------------------------------------
[2025-12-19 17:05:10] 2025-12-19 22:04:32,802 | INFO     | PanDA job id: 6935103065
[2025-12-19 17:05:10] 2025-12-19 22:04:32,802 | INFO     | task id: 47929280
[2025-12-19 17:05:10] 2025-12-19 22:04:32,802 | INFO     | errors: (none)
[2025-12-19 17:05:10] 2025-12-19 22:04:32,803 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 17:05:10] 2025-12-19 22:04:32,803 | INFO     | pilot state: finished 
[2025-12-19 17:05:10] 2025-12-19 22:04:32,803 | INFO     | transexitcode: 0
[2025-12-19 17:05:10] 2025-12-19 22:04:32,803 | INFO     | exeerrorcode: 0
[2025-12-19 17:05:10] 2025-12-19 22:04:32,803 | INFO     | exeerrordiag: 
[2025-12-19 17:05:10] 2025-12-19 22:04:32,803 | INFO     | exitcode: 0
[2025-12-19 17:05:10] 2025-12-19 22:04:32,804 | INFO     | exitmsg: OK
[2025-12-19 17:05:10] 2025-12-19 22:04:32,804 | INFO     | cpuconsumptiontime: 82626 s
[2025-12-19 17:05:10] 2025-12-19 22:04:32,804 | INFO     | nevents: 400
[2025-12-19 17:05:10] 2025-12-19 22:04:32,804 | INFO     | neventsw: 0
[2025-12-19 17:05:10] 2025-12-19 22:04:32,805 | INFO     | pid: 13426
[2025-12-19 17:05:10] 2025-12-19 22:04:32,805 | INFO     | pgrp: 13426
[2025-12-19 17:05:10] 2025-12-19 22:04:32,805 | INFO     | corecount: 8
[2025-12-19 17:05:10] 2025-12-19 22:04:32,805 | INFO     | event service: False
[2025-12-19 17:05:10] 2025-12-19 22:04:32,805 | INFO     | sizes: {0: 2283862, 1: 2284061, 4: 2284323, 11: 2284351, 10885: 2313451, 10886: 2313450, 10888: 2322688, 10892: 2322890}
[2025-12-19 17:05:10] 2025-12-19 22:04:32,806 | INFO     | --------------------------------------------------
[2025-12-19 17:05:10] 2025-12-19 22:04:32,806 | INFO     | 
[2025-12-19 17:05:10] 2025-12-19 22:04:32,806 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-19 17:05:10] 2025-12-19 22:04:32,824 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 17:05:10] 2025-12-19 22:04:32,824 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 17:05:10] 2025-12-19 22:04:32,825 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 17:05:10] 2025-12-19 22:04:32,825 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 17:05:10] 2025-12-19 22:04:32,825 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 17:05:10] 2025-12-19 22:04:32,825 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 17:05:10] 2025-12-19 22:04:32,825 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 17:05:10] 2025-12-19 22:04:32,826 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 17:05:10] 2025-12-19 22:04:32,826 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 17:05:10] 2025-12-19 22:04:32,826 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 17:05:10] 2025-12-19 22:04:32,826 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 17:05:10] 2025-12-19 22:04:32,826 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 17:05:10] 2025-12-19 22:04:32,827 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 17:05:10] 2025-12-19 22:04:32,827 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 17:05:10] 2025-12-19 22:04:32,827 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 17:05:10] 2025-12-19 22:04:32,827 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 17:05:10] 2025-12-19 22:04:32,828 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 17:05:10] 2025-12-19 22:04:32,828 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 17:05:10] 2025-12-19 22:04:32,828 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 17:05:10] 2025-12-19 22:04:32,828 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 17:05:10] 2025-12-19 22:04:32,829 | INFO     | job 6935103065 has completed (purged errors)
[2025-12-19 17:05:10] 2025-12-19 22:04:32,829 | INFO     | overall cleanup function is called
[2025-12-19 17:05:10] 2025-12-19 22:04:32,867 | INFO     | number of running child processes to parent process 13426: 1
[2025-12-19 17:05:10] 2025-12-19 22:04:32,867 | INFO     | maximum number of monitored processes: 6
[2025-12-19 17:05:10] 2025-12-19 22:04:32,867 | INFO     | aborting job monitoring since job object (job id=6935103065) has expired
[2025-12-19 17:05:10] 2025-12-19 22:04:33,838 | INFO     | --- collectZombieJob: --- 10, [13426]
[2025-12-19 17:05:10] 2025-12-19 22:04:33,838 | INFO     | zombie collector waiting for pid 13426
[2025-12-19 17:05:10] 2025-12-19 22:04:33,838 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 17:05:10] 2025-12-19 22:04:33,839 | INFO     | collected zombie processes
[2025-12-19 17:05:10] 2025-12-19 22:04:33,839 | INFO     | will attempt to kill all subprocesses of pid=13426
[2025-12-19 17:05:10] 2025-12-19 22:04:33,994 | INFO     | process IDs to be killed: [13426] (in reverse order)
[2025-12-19 17:05:10] 2025-12-19 22:04:34,053 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 17:05:10] 2025-12-19 22:04:34,053 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 17:05:10] 2025-12-19 22:04:34,056 | INFO     | did not find any defunct processes belonging to 13426
[2025-12-19 17:05:10] 2025-12-19 22:04:34,058 | INFO     | did not find any defunct processes belonging to 13426
[2025-12-19 17:05:10] 2025-12-19 22:04:34,058 | INFO     | ready for new job
[2025-12-19 17:05:10] 2025-12-19 22:04:34,058 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 17:05:10] 2025-12-19 22:04:34,060 | INFO     | ***************************************
[2025-12-19 17:05:10] 2025-12-19 22:04:34,060 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 17:05:10] 2025-12-19 22:04:34,060 | INFO     | ***************************************
[2025-12-19 17:05:10] 2025-12-19 22:04:34,060 | INFO     | 
[2025-12-19 17:05:10] 2025-12-19 22:04:34,061 | INFO     | architecture information:
[2025-12-19 17:05:10] 2025-12-19 22:04:34,061 | INFO     | executing command: cat /etc/os-release
[2025-12-19 17:05:10] 2025-12-19 22:04:34,070 | INFO     | cat /etc/os-release:
[2025-12-19 17:05:10] NAME="CentOS Linux"
[2025-12-19 17:05:10] VERSION="7 (Core)"
[2025-12-19 17:05:10] ID="centos"
[2025-12-19 17:05:10] ID_LIKE="rhel fedora"
[2025-12-19 17:05:10] VERSION_ID="7"
[2025-12-19 17:05:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 17:05:10] ANSI_COLOR="0;31"
[2025-12-19 17:05:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 17:05:10] HOME_URL="https://www.centos.org/"
[2025-12-19 17:05:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 17:05:10] 
[2025-12-19 17:05:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 17:05:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 17:05:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 17:05:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 17:05:10] 
[2025-12-19 17:05:10] 2025-12-19 22:04:34,071 | INFO     | ***************************************
[2025-12-19 17:05:10] 2025-12-19 22:04:34,574 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-19 17:05:10] 2025-12-19 22:04:34,586 | INFO     | sufficient remaining disk space (28109176832 B)
[2025-12-19 17:05:10] 2025-12-19 22:04:34,586 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 17:05:10] 2025-12-19 22:04:34,586 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 17:05:10] 2025-12-19 22:04:34,586 | INFO     | update_server=False
[2025-12-19 17:05:10] 2025-12-19 22:04:34,587 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 17:05:10] 2025-12-19 22:04:34,587 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 17:05:10] 2025-12-19 22:04:34,587 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 17:05:10] 2025-12-19 22:04:34,587 | INFO     | aborting loop
[2025-12-19 17:05:10] 2025-12-19 22:04:34,716 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 17:05:10] 2025-12-19 22:04:35,127 | INFO     | all data control threads have been joined
[2025-12-19 17:05:10] 2025-12-19 22:04:35,308 | INFO     | all payload control threads have been joined
[2025-12-19 17:05:10] 2025-12-19 22:04:35,322 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 17:05:10] 2025-12-19 22:04:35,592 | INFO     | [job] retrieve thread has finished
[2025-12-19 17:05:10] 2025-12-19 22:04:35,593 | INFO     | [job] queue monitor thread has finished
[2025-12-19 17:05:10] 2025-12-19 22:04:35,593 | INFO     | [job] job monitor thread has finished
[2025-12-19 17:05:10] 2025-12-19 22:04:35,791 | INFO     | all job control threads have been joined
[2025-12-19 17:05:10] 2025-12-19 22:04:36,098 | INFO     | [payload] failed_post thread has finished
[2025-12-19 17:05:10] 2025-12-19 22:04:36,133 | INFO     | [data] control thread has finished
[2025-12-19 17:05:10] 2025-12-19 22:04:36,310 | INFO     | [data] copytool_in thread has finished
[2025-12-19 17:05:10] 2025-12-19 22:04:36,313 | INFO     | [payload] control thread has finished
[2025-12-19 17:05:10] 2025-12-19 22:04:36,322 | INFO     | [job] validate thread has finished
[2025-12-19 17:05:10] 2025-12-19 22:04:36,375 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 17:05:10] 2025-12-19 22:04:36,500 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 17:05:10] 2025-12-19 22:04:36,682 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 17:05:10] 2025-12-19 22:04:36,724 | INFO     | [data] copytool_out thread has finished
[2025-12-19 17:05:10] 2025-12-19 22:04:36,798 | INFO     | [job] control thread has finished
[2025-12-19 17:05:10] 2025-12-19 22:04:37,098 | INFO     | [payload] validate_post thread has finished
[2025-12-19 17:05:10] 2025-12-19 22:04:39,328 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 17:05:10] 2025-12-19 22:04:45,352 | INFO     | job.realtimelogging is not enabled
[2025-12-19 17:05:10] 2025-12-19 22:04:46,356 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 17:05:10] 2025-12-19 22:05:03,138 | INFO     | [monitor] cgroup control has ended
[2025-12-19 17:05:10] 2025-12-19 22:05:04,211 | INFO     | PID=6369 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-19 17:05:10] 2025-12-19 22:05:04,212 | INFO     | .. there are 3 such processes running
[2025-12-19 17:05:10] 2025-12-19 22:05:04,212 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 17:05:10] 2025-12-19 22:05:04,213 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 17:05:10] 2025-12-19 22:05:04,213 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 17:05:10] 2025-12-19 22:05:04,901 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139798274926400)>', '<ExcThread(monitor, started 139797544818432)>']
[2025-12-19 17:05:10] 2025-12-19 22:05:05,217 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 17:05:10] 2025-12-19 22:05:05,218 | INFO     | [monitor] control thread has ended
[2025-12-19 17:05:10] 2025-12-19 22:05:09,925 | INFO     | all workflow threads have been joined
[2025-12-19 17:05:10] 2025-12-19 22:05:09,925 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 17:05:10] 2025-12-19 22:05:09,926 | INFO     | traces error code: 0
[2025-12-19 17:05:10] 2025-12-19 22:05:09,926 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 17:05:10] 2025-12-19 22:05:10,027 [wrapper] ==== pilot stdout END ====
[2025-12-19 17:05:10] 2025-12-19 22:05:10,029 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 17:05:10] 2025-12-19 22:05:10,034 [wrapper] pilotpid: 6369
[2025-12-19 17:05:10] 2025-12-19 22:05:10,037 [wrapper] Pilot exit status: 0
[2025-12-19 17:05:10] 2025-12-19 22:05:10,045 [wrapper] pandaids: 6935103065
[2025-12-19 17:05:10] 2025-12-19 22:05:10,075 [wrapper] cleanup supervisor_pilot  1700 6370
[2025-12-19 17:05:10] 2025-12-19 22:05:10,080 [wrapper] Test setup, not cleaning
[2025-12-19 17:05:10] 2025-12-19 22:05:10,082 [wrapper] apfmon messages muted
[2025-12-19 17:05:10] 2025-12-19 22:05:10,084 [wrapper] ==== wrapper stdout END ====
[2025-12-19 17:05:10] 2025-12-19 22:05:10,087 [wrapper] ==== wrapper stderr END ====
[2025-12-19 17:05:10]  *** Error codes and diagnostics ***
[2025-12-19 17:05:10]     "exeErrorCode": 0,
[2025-12-19 17:05:10]     "exeErrorDiag": "",
[2025-12-19 17:05:10]     "pilotErrorCode": 0,
[2025-12-19 17:05:10]     "pilotErrorDiag": "",
[2025-12-19 17:05:10]  *** Listing of results directory ***
[2025-12-19 17:05:10] total 432440
[2025-12-19 17:05:10] -rw-r--r-- 1 boincer umatlas      5112 Dec 19 03:01 queuedata.json
[2025-12-19 17:05:10] -rw-r--r-- 1 boincer umatlas    579449 Dec 19 03:01 pilot3.tar.gz
[2025-12-19 17:05:10] -rwx------ 1 boincer umatlas     36322 Dec 19 03:01 runpilot2-wrapper.sh
[2025-12-19 17:05:10] -rw-r--r-- 1 boincer umatlas       100 Dec 19 14:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 17:05:10] -rwxr-xr-x 1 boincer umatlas      7986 Dec 19 14:02 run_atlas
[2025-12-19 17:05:10] -rw-r--r-- 1 boincer umatlas       105 Dec 19 14:02 job.xml
[2025-12-19 17:05:10] -rw-r--r-- 2 boincer umatlas 250215624 Dec 19 14:02 EVNT.47929278._000099.pool.root.1
[2025-12-19 17:05:10] -rw-r--r-- 2 boincer umatlas     15847 Dec 19 14:02 start_atlas.sh
[2025-12-19 17:05:10] drwxrwx--x 2 boincer umatlas      4096 Dec 19 14:02 shared
[2025-12-19 17:05:10] -rw-r--r-- 2 boincer umatlas    592409 Dec 19 14:02 input.tar.gz
[2025-12-19 17:05:10] -rw-r--r-- 1 boincer umatlas         0 Dec 19 14:02 boinc_lockfile
[2025-12-19 17:05:10] -rw-r--r-- 1 boincer umatlas      2566 Dec 19 14:02 pandaJob.out
[2025-12-19 17:05:10] -rw------- 1 boincer umatlas        57 Dec 19 14:02 setup.sh.local
[2025-12-19 17:05:10] -rw------- 1 boincer umatlas    988154 Dec 19 14:02 agis_schedconf.cvmfs.json
[2025-12-19 17:05:10] drwx------ 5 boincer umatlas      4096 Dec 19 14:02 pilot3
[2025-12-19 17:05:10] -rw------- 1 boincer umatlas 184776952 Dec 19 17:03 HITS.47929280._002089.pool.root.1
[2025-12-19 17:05:10] -rw-r--r-- 1 boincer umatlas      5952 Dec 19 17:04 init_data.xml
[2025-12-19 17:05:10] -rw-r--r-- 1 boincer umatlas       531 Dec 19 17:04 boinc_task_state.xml
[2025-12-19 17:05:10] -rw------- 1 boincer umatlas      1056 Dec 19 17:04 memory_monitor_summary.json
[2025-12-19 17:05:10] -rw------- 1 boincer umatlas   1516240 Dec 19 17:04 agis_ddmendpoints.agis.ALL.json
[2025-12-19 17:05:10] -rw------- 1 boincer umatlas    419893 Dec 19 17:04 log.47929280._002089.job.log.tgz.1
[2025-12-19 17:05:10] -rw------- 1 boincer umatlas      7853 Dec 19 17:04 heartbeat.json
[2025-12-19 17:05:10] -rw-r--r-- 1 boincer umatlas        28 Dec 19 17:04 wrapper_checkpoint.txt
[2025-12-19 17:05:10] -rw-r--r-- 1 boincer umatlas      8192 Dec 19 17:04 boinc_mmap_file
[2025-12-19 17:05:10] -rw------- 1 boincer umatlas        95 Dec 19 17:05 pilot_heartbeat.json
[2025-12-19 17:05:10] -rw------- 1 boincer umatlas      4892 Dec 19 17:05 pilotlog.txt
[2025-12-19 17:05:10] -rw------- 1 boincer umatlas   1533803 Dec 19 17:05 log.47929280._002089.job.log.1
[2025-12-19 17:05:10] -rw------- 1 boincer umatlas       357 Dec 19 17:05 output.list
[2025-12-19 17:05:10] -rw-r--r-- 1 boincer umatlas       620 Dec 19 17:05 runtime_log
[2025-12-19 17:05:10] -rw------- 1 boincer umatlas   1976320 Dec 19 17:05 result.tar.gz
[2025-12-19 17:05:10] -rw------- 1 boincer umatlas       662 Dec 19 17:05 ZOpNDmXbkq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8naKDmuFO5Fm.diag
[2025-12-19 17:05:10] -rw-r--r-- 1 boincer umatlas      9343 Dec 19 17:05 runtime_log.err
[2025-12-19 17:05:10] -rw-r--r-- 1 boincer umatlas     21040 Dec 19 17:05 stderr.txt
[2025-12-19 17:05:10] HITS file was successfully produced:
[2025-12-19 17:05:10] -rw------- 1 boincer umatlas 184776952 Dec 19 17:03 shared/HITS.pool.root.1
[2025-12-19 17:05:10]  *** Contents of shared directory: ***
[2025-12-19 17:05:10] total 427332
[2025-12-19 17:05:10] -rw-r--r-- 2 boincer umatlas 250215624 Dec 19 14:02 ATLAS.root_0
[2025-12-19 17:05:10] -rw-r--r-- 2 boincer umatlas     15847 Dec 19 14:02 start_atlas.sh
[2025-12-19 17:05:10] -rw-r--r-- 2 boincer umatlas    592409 Dec 19 14:02 input.tar.gz
[2025-12-19 17:05:10] -rw------- 1 boincer umatlas 184776952 Dec 19 17:03 HITS.pool.root.1
[2025-12-19 17:05:10] -rw------- 1 boincer umatlas   1976320 Dec 19 17:05 result.tar.gz
17:05:12 (1134): run_atlas exited; CPU time 82754.077998
17:05:12 (1134): called boinc_finish(0)

</stderr_txt>
]]>

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