Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:53:47 (3759396): wrapper (7.7.26015): starting
05:53:47 (3759396): wrapper: running run_atlas (--nthreads 4)
[2025-12-21 05:53:47] Arguments: --nthreads 4
[2025-12-21 05:53:47] Threads: 4
[2025-12-21 05:53:47] Checking for CVMFS
[2025-12-21 05:53:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-21 05:53:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-21 05:53:47] Running cvmfs_config stat atlas.cern.ch
[2025-12-21 05:53:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-21 05:53:47] 2.9.2.0 504409 11496 101612 154249 0 81 21825999 36864000 0 130560 0 8566827 99.991 415067 6695 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-21 05:53:47] CVMFS is ok
[2025-12-21 05:53:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-21 05:53:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-21 05:53:47] Further information can be found at the LHC@home message board.
[2025-12-21 05:53:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-21 05:53:47] Checking for apptainer binary...
[2025-12-21 05:53:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-21 05:53:47] Running /usr/bin/apptainer --version
[2025-12-21 05:53:47] apptainer version 1.4.1-1.1
[2025-12-21 05:53:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-21 05:53:47] thA314a
[2025-12-21 05:53:47] apptainer works
[2025-12-21 05:53:47] Set ATHENA_PROC_NUMBER=4
[2025-12-21 05:53:47] Set ATHENA_CORE_NUMBER=4
[2025-12-21 05:53:47] Starting ATLAS job with PandaID=6935100664
[2025-12-21 05:53:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-21 07:07:14]  *** The last 200 lines of the pilot log: ***
[2025-12-21 07:07:14] 2025-12-21 06:06:44,805 | INFO     | [job] retrieve thread has finished
[2025-12-21 07:07:14] 2025-12-21 06:06:44,805 | INFO     | [job] queue monitor thread has finished
[2025-12-21 07:07:14] 2025-12-21 06:06:44,805 | INFO     | [job] job monitor thread has finished
[2025-12-21 07:07:14] 2025-12-21 06:06:44,830 | INFO     | [payload] control thread has finished
[2025-12-21 07:07:14] 2025-12-21 06:06:44,917 | INFO     | [payload] validate_pre thread has finished
[2025-12-21 07:07:14] 2025-12-21 06:06:45,185 | INFO     | [payload] validate_post thread has finished
[2025-12-21 07:07:14] 2025-12-21 06:06:45,190 | INFO     | [data] copytool_in thread has finished
[2025-12-21 07:07:14] 2025-12-21 06:06:45,318 | INFO     | all job control threads have been joined
[2025-12-21 07:07:14] 2025-12-21 06:06:45,719 | INFO     | [data] control thread has finished
[2025-12-21 07:07:14] 2025-12-21 06:06:45,949 | INFO     | [payload] execute_payloads thread has finished
[2025-12-21 07:07:14] 2025-12-21 06:06:46,079 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-21 07:07:14] 2025-12-21 06:06:46,187 | INFO     | [payload] failed_post thread has finished
[2025-12-21 07:07:14] 2025-12-21 06:06:46,238 | INFO     | [job] validate thread has finished
[2025-12-21 07:07:14] 2025-12-21 06:06:46,275 | INFO     | [job] create_data_payload thread has finished
[2025-12-21 07:07:14] 2025-12-21 06:06:46,324 | INFO     | [job] control thread has finished
[2025-12-21 07:07:14] 2025-12-21 06:06:46,602 | INFO     | [data] copytool_out thread has finished
[2025-12-21 07:07:14] 2025-12-21 06:06:46,852 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-21 07:07:14] 2025-12-21 06:06:50,859 | INFO     | [data] queue_monitor thread has finished
[2025-12-21 07:07:14] 2025-12-21 06:07:00,155 | INFO     | [monitor] cgroup control has ended
[2025-12-21 07:07:14] 2025-12-21 06:07:00,554 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140392053569344)>', '<ExcThread(monitor, started 140391248545536)>']
[2025-12-21 07:07:14] 2025-12-21 06:07:05,580 | INFO     | all workflow threads have been joined
[2025-12-21 07:07:14] 2025-12-21 06:07:05,580 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-21 07:07:14] 2025-12-21 06:07:05,580 | INFO     | traces error code: 0
[2025-12-21 07:07:14] 2025-12-21 06:07:05,580 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-21 07:07:14] 2025-12-21 06:07:14,262 | INFO     | PID=3763175 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-21 07:07:14] 2025-12-21 06:07:14,262 | INFO     | found 0 job(s) in 20 queues
[2025-12-21 07:07:14] 2025-12-21 06:07:14,262 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-21 07:07:14] 2025-12-21 06:07:14,262 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-21 07:07:14] 2025-12-21 06:07:14,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-21 07:07:14] 2025-12-21 06:07:14,262 | INFO     | [monitor] control thread has ended
[2025-12-21 07:07:14] 2025-12-21 06:07:14,327 [wrapper] ==== pilot stdout END ====
[2025-12-21 07:07:14] 2025-12-21 06:07:14,331 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-21 07:07:14] 2025-12-21 06:07:14,335 [wrapper] pilotpid: 3763175
[2025-12-21 07:07:14] 2025-12-21 06:07:14,338 [wrapper] Pilot exit status: 0
[2025-12-21 07:07:14] 2025-12-21 06:07:14,349 [wrapper] pandaids: 6935100664
[2025-12-21 07:07:14] 2025-12-21 06:07:14,371 [wrapper] cleanup supervisor_pilot 3779335 3763176
[2025-12-21 07:07:14] 2025-12-21 06:07:14,374 [wrapper] Test setup, not cleaning
[2025-12-21 07:07:14] 2025-12-21 06:07:14,378 [wrapper] apfmon messages muted
[2025-12-21 07:07:14] 2025-12-21 06:07:14,381 [wrapper] ==== wrapper stdout END ====
[2025-12-21 07:07:14] 2025-12-21 06:07:14,385 [wrapper] ==== wrapper stderr END ====
[2025-12-21 07:07:14]  *** Error codes and diagnostics ***
[2025-12-21 07:07:14]     "exeErrorCode": 0,
[2025-12-21 07:07:14]     "exeErrorDiag": "",
[2025-12-21 07:07:14]     "pilotErrorCode": 0,
[2025-12-21 07:07:14]     "pilotErrorDiag": "",
[2025-12-21 07:07:14]  *** Listing of results directory ***
[2025-12-21 07:07:14] total 435840
[2025-12-21 07:07:14] -rw-r--r-- 1 boinc boinc    597923 Dec  8 08:17 pilot3.tar.gz
[2025-12-21 07:07:14] -rwx------ 1 boinc boinc     36322 Dec 19 06:09 runpilot2-wrapper.sh
[2025-12-21 07:07:14] -rw-r--r-- 1 boinc boinc      5112 Dec 19 06:12 queuedata.json
[2025-12-21 07:07:14] -rw-r--r-- 1 boinc boinc       100 Dec 21 05:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-21 07:07:14] -rwxr-xr-x 1 boinc boinc      7986 Dec 21 05:53 run_atlas
[2025-12-21 07:07:14] -rw-r--r-- 1 boinc boinc       105 Dec 21 05:53 job.xml
[2025-12-21 07:07:14] -rw-r--r-- 2 boinc boinc 252971174 Dec 21 05:53 EVNT.47929278._000040.pool.root.1
[2025-12-21 07:07:14] -rw-r--r-- 2 boinc boinc    610550 Dec 21 05:53 input.tar.gz
[2025-12-21 07:07:14] -rw-r--r-- 2 boinc boinc     15847 Dec 21 05:53 start_atlas.sh
[2025-12-21 07:07:14] drwxrwx--x 2 boinc boinc      4096 Dec 21 05:53 shared
[2025-12-21 07:07:14] -rw-r--r-- 1 boinc boinc         0 Dec 21 05:53 boinc_setup_complete
[2025-12-21 07:07:14] -rw-r--r-- 1 boinc boinc      6371 Dec 21 05:53 init_data.xml
[2025-12-21 07:07:14] -rw-r--r-- 1 boinc boinc         0 Dec 21 05:53 boinc_lockfile
[2025-12-21 07:07:14] -rw-r--r-- 1 boinc boinc      2565 Dec 21 05:53 pandaJob.out
[2025-12-21 07:07:14] -rw------- 1 boinc boinc    988200 Dec 21 05:53 agis_schedconf.cvmfs.json
[2025-12-21 07:07:14] -rw------- 1 boinc boinc   1516240 Dec 21 05:53 agis_ddmendpoints.agis.ALL.json
[2025-12-21 07:07:14] drwx------ 7 boinc boinc      4096 Dec 21 05:53 pilot3
[2025-12-21 07:07:14] -rw------- 1 boinc boinc 187575548 Dec 21 07:06 HITS.47929280._000912.pool.root.1
[2025-12-21 07:07:14] -rw------- 1 boinc boinc        95 Dec 21 07:06 pilot_heartbeat.json
[2025-12-21 07:07:14] -rw-r--r-- 1 boinc boinc       529 Dec 21 07:06 boinc_task_state.xml
[2025-12-21 07:07:14] -rw------- 1 boinc boinc      1022 Dec 21 07:06 memory_monitor_summary.json
[2025-12-21 07:07:14] -rw------- 1 boinc boinc    260322 Dec 21 07:06 log.47929280._000912.job.log.tgz.1
[2025-12-21 07:07:14] -rw------- 1 boinc boinc      7762 Dec 21 07:06 heartbeat.json
[2025-12-21 07:07:14] -rw-r--r-- 1 boinc boinc      8192 Dec 21 07:06 boinc_mmap_file
[2025-12-21 07:07:14] -rw-r--r-- 1 boinc boinc        27 Dec 21 07:06 wrapper_checkpoint.txt
[2025-12-21 07:07:14] -rw------- 1 boinc boinc       747 Dec 21 07:07 pilotlog.txt
[2025-12-21 07:07:14] -rw------- 1 boinc boinc    651233 Dec 21 07:07 log.47929280._000912.job.log.1
[2025-12-21 07:07:14] -rw------- 1 boinc boinc       357 Dec 21 07:07 output.list
[2025-12-21 07:07:14] -rw-r--r-- 1 boinc boinc       620 Dec 21 07:07 runtime_log
[2025-12-21 07:07:14] -rw------- 1 boinc boinc    931840 Dec 21 07:07 result.tar.gz
[2025-12-21 07:07:14] -rw-r--r-- 1 boinc boinc      8902 Dec 21 07:07 runtime_log.err
[2025-12-21 07:07:14] -rw------- 1 boinc boinc       659 Dec 21 07:07 Ys3KDmQvhq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1WfKDmzCpAhm.diag
[2025-12-21 07:07:14] -rw-r--r-- 1 boinc boinc      6534 Dec 21 07:07 stderr.txt
[2025-12-21 07:07:14] HITS file was successfully produced:
[2025-12-21 07:07:14] -rw------- 1 boinc boinc 187575548 Dec 21 07:06 shared/HITS.pool.root.1
[2025-12-21 07:07:14]  *** Contents of shared directory: ***
[2025-12-21 07:07:14] total 431760
[2025-12-21 07:07:14] -rw-r--r-- 2 boinc boinc 252971174 Dec 21 05:53 ATLAS.root_0
[2025-12-21 07:07:14] -rw-r--r-- 2 boinc boinc    610550 Dec 21 05:53 input.tar.gz
[2025-12-21 07:07:14] -rw-r--r-- 2 boinc boinc     15847 Dec 21 05:53 start_atlas.sh
[2025-12-21 07:07:14] -rw------- 1 boinc boinc 187575548 Dec 21 07:06 HITS.pool.root.1
[2025-12-21 07:07:14] -rw------- 1 boinc boinc    931840 Dec 21 07:07 result.tar.gz
07:07:16 (3759396): run_atlas exited; CPU time 16476.272877
07:07:16 (3759396): called boinc_finish(0)

</stderr_txt>
]]>

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