Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:57:23 (2933050): wrapper (7.7.26015): starting
13:57:23 (2933050): wrapper: running run_atlas (--nthreads 3)
[2025-12-20 13:57:23] Arguments: --nthreads 3
[2025-12-20 13:57:23] Threads: 3
[2025-12-20 13:57:23] Checking for CVMFS
[2025-12-20 13:57:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-20 13:57:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-20 13:57:23] Running cvmfs_config stat atlas.cern.ch
[2025-12-20 13:57:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-20 13:57:23] 2.9.2.0 415797 9999 92384 154226 1 81 21326746 36864001 0 130560 0 6481272 99.990 357569 6969 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-20 13:57:23] CVMFS is ok
[2025-12-20 13:57:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-20 13:57:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-20 13:57:23] Further information can be found at the LHC@home message board.
[2025-12-20 13:57:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-20 13:57:23] Checking for apptainer binary...
[2025-12-20 13:57:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-20 13:57:23] Running /usr/bin/apptainer --version
[2025-12-20 13:57:23] apptainer version 1.4.1-1.1
[2025-12-20 13:57:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-20 13:57:23] magicA246a
[2025-12-20 13:57:23] apptainer works
[2025-12-20 13:57:23] Set ATHENA_PROC_NUMBER=3
[2025-12-20 13:57:23] Set ATHENA_CORE_NUMBER=3
[2025-12-20 13:57:23] Starting ATLAS job with PandaID=6935286021
[2025-12-20 13:57:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-20 15:21:41]  *** The last 200 lines of the pilot log: ***
[2025-12-20 15:21:41] 2025-12-20 14:20:40,213 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-20 15:21:41] 2025-12-20 14:20:40,224 | INFO     | sufficient remaining disk space (282827161600 B)
[2025-12-20 15:21:41] 2025-12-20 14:20:40,224 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-20 15:21:41] 2025-12-20 14:20:40,224 | INFO     | current server update state: UPDATING_FINAL
[2025-12-20 15:21:41] 2025-12-20 14:20:40,224 | INFO     | update_server=False
[2025-12-20 15:21:41] 2025-12-20 14:20:40,224 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-20 15:21:41] 2025-12-20 14:20:40,224 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-20 15:21:41] 2025-12-20 14:20:40,224 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-20 15:21:41] 2025-12-20 14:20:40,224 | INFO     | aborting loop
[2025-12-20 15:21:41] 2025-12-20 14:20:40,397 | INFO     | all job control threads have been joined
[2025-12-20 15:21:41] 2025-12-20 14:20:41,001 | INFO     | all payload control threads have been joined
[2025-12-20 15:21:41] 2025-12-20 14:20:41,004 | INFO     | all data control threads have been joined
[2025-12-20 15:21:41] 2025-12-20 14:20:41,229 | INFO     | [job] retrieve thread has finished
[2025-12-20 15:21:41] 2025-12-20 14:20:41,230 | INFO     | [job] queue monitor thread has finished
[2025-12-20 15:21:41] 2025-12-20 14:20:41,230 | INFO     | [job] job monitor thread has finished
[2025-12-20 15:21:41] 2025-12-20 14:20:41,403 | INFO     | [job] control thread has finished
[2025-12-20 15:21:41] 2025-12-20 14:20:41,428 | INFO     | [payload] execute_payloads thread has finished
[2025-12-20 15:21:41] 2025-12-20 14:20:41,553 | INFO     | [data] copytool_in thread has finished
[2025-12-20 15:21:41] 2025-12-20 14:20:41,617 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-20 15:21:41] 2025-12-20 14:20:41,719 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-20 15:21:41] 2025-12-20 14:20:41,858 | INFO     | [payload] failed_post thread has finished
[2025-12-20 15:21:41] 2025-12-20 14:20:41,891 | INFO     | [job] validate thread has finished
[2025-12-20 15:21:41] 2025-12-20 14:20:41,961 | INFO     | [payload] validate_pre thread has finished
[2025-12-20 15:21:41] 2025-12-20 14:20:41,961 | INFO     | [job] create_data_payload thread has finished
[2025-12-20 15:21:41] 2025-12-20 14:20:42,005 | INFO     | [payload] control thread has finished
[2025-12-20 15:21:41] 2025-12-20 14:20:42,006 | INFO     | [data] control thread has finished
[2025-12-20 15:21:41] 2025-12-20 14:20:42,245 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-20 15:21:41] 2025-12-20 14:20:42,380 | INFO     | [payload] validate_post thread has finished
[2025-12-20 15:21:41] 2025-12-20 14:20:43,623 | INFO     | [data] copytool_out thread has finished
[2025-12-20 15:21:41] 2025-12-20 14:20:46,251 | INFO     | [data] queue_monitor thread has finished
[2025-12-20 15:21:41] 2025-12-20 14:21:10,394 | INFO     | PID=2936772 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-20 15:21:41] 2025-12-20 14:21:10,394 | INFO     | found 0 job(s) in 20 queues
[2025-12-20 15:21:41] 2025-12-20 14:21:10,394 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-20 15:21:41] 2025-12-20 14:21:10,394 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-20 15:21:41] 2025-12-20 14:21:35,834 | INFO     | [monitor] cgroup control has ended
[2025-12-20 15:21:41] 2025-12-20 14:21:35,894 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139693899831104)>', '<ExcThread(monitor, started 139693266036480)>']
[2025-12-20 15:21:41] 2025-12-20 14:21:36,524 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-20 15:21:41] 2025-12-20 14:21:36,524 | INFO     | [monitor] control thread has ended
[2025-12-20 15:21:41] 2025-12-20 14:21:40,919 | INFO     | all workflow threads have been joined
[2025-12-20 15:21:41] 2025-12-20 14:21:40,920 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-20 15:21:41] 2025-12-20 14:21:40,920 | INFO     | traces error code: 0
[2025-12-20 15:21:41] 2025-12-20 14:21:40,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-20 15:21:41] 2025-12-20 14:21:40,974 [wrapper] ==== pilot stdout END ====
[2025-12-20 15:21:41] 2025-12-20 14:21:40,977 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-20 15:21:41] 2025-12-20 14:21:40,979 [wrapper] pilotpid: 2936772
[2025-12-20 15:21:41] 2025-12-20 14:21:40,981 [wrapper] Pilot exit status: 0
[2025-12-20 15:21:41] 2025-12-20 14:21:40,989 [wrapper] pandaids: 6935286021
[2025-12-20 15:21:41] 2025-12-20 14:21:41,009 [wrapper] cleanup supervisor_pilot 2956026 2936773
[2025-12-20 15:21:41] 2025-12-20 14:21:41,012 [wrapper] Test setup, not cleaning
[2025-12-20 15:21:41] 2025-12-20 14:21:41,014 [wrapper] apfmon messages muted
[2025-12-20 15:21:41] 2025-12-20 14:21:41,016 [wrapper] ==== wrapper stdout END ====
[2025-12-20 15:21:41] 2025-12-20 14:21:41,019 [wrapper] ==== wrapper stderr END ====
[2025-12-20 15:21:41]  *** Error codes and diagnostics ***
[2025-12-20 15:21:41]     "exeErrorCode": 0,
[2025-12-20 15:21:41]     "exeErrorDiag": "",
[2025-12-20 15:21:41]     "pilotErrorCode": 0,
[2025-12-20 15:21:41]     "pilotErrorDiag": "",
[2025-12-20 15:21:41]  *** Listing of results directory ***
[2025-12-20 15:21:41] total 431040
[2025-12-20 15:21:41] -rwx------ 1 boinc boinc     36322 Dec 19 12:38 runpilot2-wrapper.sh
[2025-12-20 15:21:41] -rw-r--r-- 1 boinc boinc    579449 Dec 19 12:40 pilot3.tar.gz
[2025-12-20 15:21:41] -rw-r--r-- 1 boinc boinc      5112 Dec 19 12:41 queuedata.json
[2025-12-20 15:21:41] -rw-r--r-- 1 boinc boinc       100 Dec 20 13:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-20 15:21:41] -rwxr-xr-x 1 boinc boinc      7986 Dec 20 13:57 run_atlas
[2025-12-20 15:21:41] -rw-r--r-- 1 boinc boinc       105 Dec 20 13:57 job.xml
[2025-12-20 15:21:41] -rw-r--r-- 2 boinc boinc 253204583 Dec 20 13:57 EVNT.47929278._000146.pool.root.1
[2025-12-20 15:21:41] -rw-r--r-- 2 boinc boinc    592408 Dec 20 13:57 input.tar.gz
[2025-12-20 15:21:41] -rw-r--r-- 2 boinc boinc     15847 Dec 20 13:57 start_atlas.sh
[2025-12-20 15:21:41] drwxrwx--x 2 boinc boinc      4096 Dec 20 13:57 shared
[2025-12-20 15:21:41] -rw-r--r-- 1 boinc boinc         0 Dec 20 13:57 boinc_setup_complete
[2025-12-20 15:21:41] -rw-r--r-- 1 boinc boinc      6447 Dec 20 13:57 init_data.xml
[2025-12-20 15:21:41] -rw-r--r-- 1 boinc boinc         0 Dec 20 13:57 boinc_lockfile
[2025-12-20 15:21:41] -rw-r--r-- 1 boinc boinc      2568 Dec 20 13:57 pandaJob.out
[2025-12-20 15:21:41] -rw------- 1 boinc boinc    988146 Dec 20 13:57 agis_schedconf.cvmfs.json
[2025-12-20 15:21:41] -rw------- 1 boinc boinc   1516240 Dec 20 13:57 agis_ddmendpoints.agis.ALL.json
[2025-12-20 15:21:41] drwx------ 5 boinc boinc      4096 Dec 20 13:57 pilot3
[2025-12-20 15:21:41] -rw------- 1 boinc boinc 182313380 Dec 20 15:20 HITS.47929280._003463.pool.root.1
[2025-12-20 15:21:41] -rw-r--r-- 1 boinc boinc       529 Dec 20 15:20 boinc_task_state.xml
[2025-12-20 15:21:41] -rw------- 1 boinc boinc      1027 Dec 20 15:20 memory_monitor_summary.json
[2025-12-20 15:21:41] -rw------- 1 boinc boinc    254679 Dec 20 15:20 log.47929280._003463.job.log.tgz.1
[2025-12-20 15:21:41] -rw------- 1 boinc boinc      7763 Dec 20 15:20 heartbeat.json
[2025-12-20 15:21:41] -rw------- 1 boinc boinc        95 Dec 20 15:21 pilot_heartbeat.json
[2025-12-20 15:21:41] -rw-r--r-- 1 boinc boinc      8192 Dec 20 15:21 boinc_mmap_file
[2025-12-20 15:21:41] -rw-r--r-- 1 boinc boinc        27 Dec 20 15:21 wrapper_checkpoint.txt
[2025-12-20 15:21:41] -rw------- 1 boinc boinc      4752 Dec 20 15:21 pilotlog.txt
[2025-12-20 15:21:41] -rw------- 1 boinc boinc    732208 Dec 20 15:21 log.47929280._003463.job.log.1
[2025-12-20 15:21:41] -rw------- 1 boinc boinc       357 Dec 20 15:21 output.list
[2025-12-20 15:21:41] -rw-r--r-- 1 boinc boinc       620 Dec 20 15:21 runtime_log
[2025-12-20 15:21:41] -rw------- 1 boinc boinc   1003520 Dec 20 15:21 result.tar.gz
[2025-12-20 15:21:41] -rw-r--r-- 1 boinc boinc      8917 Dec 20 15:21 runtime_log.err
[2025-12-20 15:21:41] -rw------- 1 boinc boinc       662 Dec 20 15:21 O4oNDm0znq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmb9aKDmFJu2hm.diag
[2025-12-20 15:21:41] -rw-r--r-- 1 boinc boinc      7866 Dec 20 15:21 stderr.txt
[2025-12-20 15:21:41] HITS file was successfully produced:
[2025-12-20 15:21:41] -rw------- 1 boinc boinc 182313380 Dec 20 15:20 shared/HITS.pool.root.1
[2025-12-20 15:21:41]  *** Contents of shared directory: ***
[2025-12-20 15:21:41] total 426900
[2025-12-20 15:21:41] -rw-r--r-- 2 boinc boinc 253204583 Dec 20 13:57 ATLAS.root_0
[2025-12-20 15:21:41] -rw-r--r-- 2 boinc boinc    592408 Dec 20 13:57 input.tar.gz
[2025-12-20 15:21:41] -rw-r--r-- 2 boinc boinc     15847 Dec 20 13:57 start_atlas.sh
[2025-12-20 15:21:41] -rw------- 1 boinc boinc 182313380 Dec 20 15:20 HITS.pool.root.1
[2025-12-20 15:21:41] -rw------- 1 boinc boinc   1003520 Dec 20 15:21 result.tar.gz
15:21:42 (2933050): run_atlas exited; CPU time 14232.612676
15:21:42 (2933050): called boinc_finish(0)

</stderr_txt>
]]>

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