Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:04:31 (838075): wrapper (7.7.26015): starting
17:04:31 (838075): wrapper: running run_atlas (--nthreads 4)
[2025-12-20 17:04:31] Arguments: --nthreads 4
[2025-12-20 17:04:31] Threads: 4
[2025-12-20 17:04:31] Checking for CVMFS
[2025-12-20 17:04:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-20 17:04:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-20 17:04:31] Running cvmfs_config stat atlas.cern.ch
[2025-12-20 17:04:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-20 17:04:31] 2.9.2.0 419240 1739 86072 154230 0 57 18661081 36864000 0 130560 0 1096623 99.990 61371 2254 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-20 17:04:31] CVMFS is ok
[2025-12-20 17:04:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-20 17:04:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-20 17:04:31] Further information can be found at the LHC@home message board.
[2025-12-20 17:04:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-20 17:04:31] Checking for apptainer binary...
[2025-12-20 17:04:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-20 17:04:31] Running /usr/bin/apptainer --version
[2025-12-20 17:04:31] apptainer version 1.4.1-1.1
[2025-12-20 17:04:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-20 17:04:31] thA350a
[2025-12-20 17:04:31] apptainer works
[2025-12-20 17:04:31] Set ATHENA_PROC_NUMBER=4
[2025-12-20 17:04:31] Set ATHENA_CORE_NUMBER=4
[2025-12-20 17:04:31] Starting ATLAS job with PandaID=6934988249
[2025-12-20 17:04:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-20 18:15:02]  *** The last 200 lines of the pilot log: ***
[2025-12-20 18:15:02]  workdir=None
[2025-12-20 18:15:02] ]
[2025-12-20 18:15:02] 2025-12-20 17:14:25,205 | INFO     | transferring file log.47929280._000404.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6934988249/log.47929280._000404.job.log.tgz.1 to /local/data/boinc/
[2025-12-20 18:15:02] 2025-12-20 17:14:25,205 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6934988249/log.47929280._000404.job.log.tgz.1 /local/data/boinc/slots/0/log.47929280._0004
[2025-12-20 18:15:02] 2025-12-20 17:14:25,222 | INFO     | adding to output.list: log.47929280._000404.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c0/d7/log.47929280._000404.job.log.tg
[2025-12-20 18:15:02] 2025-12-20 17:14:25,222 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-20 18:15:02] 2025-12-20 17:14:25,222 | INFO     | summary of transferred files:
[2025-12-20 18:15:02] 2025-12-20 17:14:25,223 | INFO     |  -- lfn=log.47929280._000404.job.log.tgz.1, status_code=0, status=transferred
[2025-12-20 18:15:02] 2025-12-20 17:14:25,223 | INFO     | stage-out finished correctly
[2025-12-20 18:15:02] 2025-12-20 17:14:25,262 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-20 18:15:02] 2025-12-20 17:14:27,042 | INFO     | time since job start (4188s) is within the limit (174528.0s)
[2025-12-20 18:15:02] 2025-12-20 17:14:27,214 | INFO     | job 6934988249 has state=finished
[2025-12-20 18:15:02] 2025-12-20 17:14:27,214 | INFO     | preparing for final server update for job 6934988249 in state='finished'
[2025-12-20 18:15:02] 2025-12-20 17:14:27,215 | INFO     | this job has now completed (state=finished)
[2025-12-20 18:15:02] 2025-12-20 17:14:27,215 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-20 18:15:02] 2025-12-20 17:14:27,215 | INFO     | log transfer has been attempted: DONE
[2025-12-20 18:15:02] 2025-12-20 17:14:27,215 | INFO     | job 6934988249 has finished - writing final server update
[2025-12-20 18:15:02] 2025-12-20 17:14:27,215 | INFO     | total number of processed events: 400 (read)
[2025-12-20 18:15:02] 2025-12-20 17:14:27,216 | INFO     | executing command: lscpu
[2025-12-20 18:15:02] 2025-12-20 17:14:27,236 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-20 18:15:02] 2025-12-20 17:14:27,351 | WARNING  | process 848451 can no longer be monitored (due to stat problems) - aborting
[2025-12-20 18:15:02] 2025-12-20 17:14:27,351 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6934988249/memory_monitor_summary.json (trf name=prmon)
[2025-12-20 18:15:02] 2025-12-20 17:14:27,352 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6934988249/memory_monitor_summary.json (trf name=prmon)
[2025-12-20 18:15:02] 2025-12-20 17:14:27,352 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-12-20 18:15:02] 2025-12-20 17:14:27,352 | WARNING  | maxPSS not found in memory monitor output
[2025-12-20 18:15:02] 2025-12-20 17:14:27,352 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2039418 B
[2025-12-20 18:15:02] 2025-12-20 17:14:27,352 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16070 B
[2025-12-20 18:15:02] 2025-12-20 17:14:27,352 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-20 18:15:02] 2025-12-20 17:14:29,047 | INFO     | time since job start (4190s) is within the limit (174528.0s)
[2025-12-20 18:15:02] 2025-12-20 17:14:30,385 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-20 18:15:02] 2025-12-20 17:14:30,391 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3426.0364375
[2025-12-20 18:15:02] 2025-12-20 17:14:30,393 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6934988249/memory_monitor_summary.json (trf name=prmon)
[2025-12-20 18:15:02] 2025-12-20 17:14:30,394 | INFO     | extracted standard info from prmon json
[2025-12-20 18:15:02] 2025-12-20 17:14:30,394 | INFO     | extracted standard memory fields from prmon json
[2025-12-20 18:15:02] 2025-12-20 17:14:30,394 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-20 18:15:02] 2025-12-20 17:14:30,394 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-20 18:15:02] 2025-12-20 17:14:30,394 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-20 18:15:02] 2025-12-20 17:14:30,395 | INFO     | fitting pss+swap vs Time
[2025-12-20 18:15:02] 2025-12-20 17:14:30,395 | INFO     | sum of square deviations: 73882315.5
[2025-12-20 18:15:02] 2025-12-20 17:14:30,395 | INFO     | sum of deviations: -1437619818.0000002
[2025-12-20 18:15:02] 2025-12-20 17:14:30,395 | INFO     | mean x: 1766248866.5
[2025-12-20 18:15:02] 2025-12-20 17:14:30,395 | INFO     | mean y: 2441045.9032258065
[2025-12-20 18:15:02] 2025-12-20 17:14:30,396 | INFO     | intersect: 34370535180.695694
[2025-12-20 18:15:02] 2025-12-20 17:14:30,396 | INFO     | chi2: 0.08134823780637519
[2025-12-20 18:15:02] 2025-12-20 17:14:30,396 | INFO     | current memory leak: -19.46 B/s (using 62 data points, chi2=0.08)
[2025-12-20 18:15:02] 2025-12-20 17:14:30,396 | INFO     | could have reported an average CPU frequency of 3672 MHz (6 samples)
[2025-12-20 18:15:02] 2025-12-20 17:14:30,396 | INFO     | ..............................
[2025-12-20 18:15:02] 2025-12-20 17:14:30,396 | INFO     | . Timing measurements:
[2025-12-20 18:15:02] 2025-12-20 17:14:30,396 | INFO     | . get job = 0 s
[2025-12-20 18:15:02] 2025-12-20 17:14:30,396 | INFO     | . initial setup = 1 s
[2025-12-20 18:15:02] 2025-12-20 17:14:30,396 | INFO     | . payload setup = 4 s
[2025-12-20 18:15:02] 2025-12-20 17:14:30,396 | INFO     | . stage-in = 0 s
[2025-12-20 18:15:02] 2025-12-20 17:14:30,396 | INFO     | . payload execution = 4163 s
[2025-12-20 18:15:02] 2025-12-20 17:14:30,396 | INFO     | . stage-out = 0 s
[2025-12-20 18:15:02] 2025-12-20 17:14:30,396 | INFO     | . log creation = 0 s
[2025-12-20 18:15:02] 2025-12-20 17:14:30,396 | INFO     | ..............................
[2025-12-20 18:15:02] 2025-12-20 17:14:30,414 | INFO     | sufficient remaining disk space (239710765056 B)
[2025-12-20 18:15:02] 2025-12-20 17:14:30,420 | INFO     | work directory size check will use 2768240640 B as a max limit (20% grace limit added, divider=1)
[2025-12-20 18:15:02] 2025-12-20 17:14:30,438 | INFO     | 
[2025-12-20 18:15:02] 2025-12-20 17:14:30,438 | INFO     | job summary report
[2025-12-20 18:15:02] 2025-12-20 17:14:30,438 | INFO     | --------------------------------------------------
[2025-12-20 18:15:02] 2025-12-20 17:14:30,438 | INFO     | PanDA job id: 6934988249
[2025-12-20 18:15:02] 2025-12-20 17:14:30,438 | INFO     | task id: 47929280
[2025-12-20 18:15:02] 2025-12-20 17:14:30,438 | INFO     | errors: (none)
[2025-12-20 18:15:02] 2025-12-20 17:14:30,438 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-20 18:15:02] 2025-12-20 17:14:30,438 | INFO     | pilot state: finished 
[2025-12-20 18:15:02] 2025-12-20 17:14:30,438 | INFO     | transexitcode: 0
[2025-12-20 18:15:02] 2025-12-20 17:14:30,438 | INFO     | exeerrorcode: 0
[2025-12-20 18:15:02] 2025-12-20 17:14:30,438 | INFO     | exeerrordiag: 
[2025-12-20 18:15:02] 2025-12-20 17:14:30,438 | INFO     | exitcode: 0
[2025-12-20 18:15:02] 2025-12-20 17:14:30,438 | INFO     | exitmsg: OK
[2025-12-20 18:15:02] 2025-12-20 17:14:30,438 | INFO     | cpuconsumptiontime: 15755 s
[2025-12-20 18:15:02] 2025-12-20 17:14:30,439 | INFO     | nevents: 400
[2025-12-20 18:15:02] 2025-12-20 17:14:30,439 | INFO     | neventsw: 0
[2025-12-20 18:15:02] 2025-12-20 17:14:30,439 | INFO     | pid: 848451
[2025-12-20 18:15:02] 2025-12-20 17:14:30,439 | INFO     | pgrp: 848451
[2025-12-20 18:15:02] 2025-12-20 17:14:30,439 | INFO     | corecount: 4
[2025-12-20 18:15:02] 2025-12-20 17:14:30,439 | INFO     | event service: False
[2025-12-20 18:15:02] 2025-12-20 17:14:30,439 | INFO     | sizes: {0: 2284033, 3: 2284295, 11: 2284323, 4170: 2310354, 4172: 2319414, 4177: 2319552}
[2025-12-20 18:15:02] 2025-12-20 17:14:30,439 | INFO     | --------------------------------------------------
[2025-12-20 18:15:02] 2025-12-20 17:14:30,439 | INFO     | 
[2025-12-20 18:15:02] 2025-12-20 17:14:30,439 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-20 18:15:02] 2025-12-20 17:14:30,442 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6934988249: 2332875 B (within 2768240640 B limit)
[2025-12-20 18:15:02] 2025-12-20 17:14:30,443 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6934988249/HITS.47929280._000404.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-20 18:15:02] 2025-12-20 17:14:30,443 | INFO     | total size of present files: 0 B (workdir size: 2332875 B)
[2025-12-20 18:15:02] 2025-12-20 17:14:30,443 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6934988249/HITS.47929280._000404.pool.root.1 since it does not exist
[2025-12-20 18:15:02] 2025-12-20 17:14:30,457 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-20 18:15:02] 2025-12-20 17:14:30,457 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-20 18:15:02] 2025-12-20 17:14:30,457 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-20 18:15:02] 2025-12-20 17:14:30,457 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-20 18:15:02] 2025-12-20 17:14:30,458 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-20 18:15:02] 2025-12-20 17:14:30,458 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-20 18:15:02] 2025-12-20 17:14:30,458 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-20 18:15:02] 2025-12-20 17:14:30,458 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-20 18:15:02] 2025-12-20 17:14:30,458 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-20 18:15:02] 2025-12-20 17:14:30,458 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-20 18:15:02] 2025-12-20 17:14:30,458 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-20 18:15:02] 2025-12-20 17:14:30,458 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-20 18:15:02] 2025-12-20 17:14:30,458 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-20 18:15:02] 2025-12-20 17:14:30,458 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-20 18:15:02] 2025-12-20 17:14:30,458 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-20 18:15:02] 2025-12-20 17:14:30,458 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-20 18:15:02] 2025-12-20 17:14:30,458 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-20 18:15:02] 2025-12-20 17:14:30,458 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-20 18:15:02] 2025-12-20 17:14:30,458 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-20 18:15:02] 2025-12-20 17:14:30,458 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-20 18:15:02] 2025-12-20 17:14:30,458 | INFO     | job 6934988249 has completed (purged errors)
[2025-12-20 18:15:02] 2025-12-20 17:14:30,458 | INFO     | overall cleanup function is called
[2025-12-20 18:15:02] 2025-12-20 17:14:30,488 | INFO     | number of running child processes to parent process 848451: 1
[2025-12-20 18:15:02] 2025-12-20 17:14:30,488 | INFO     | maximum number of monitored processes: 6
[2025-12-20 18:15:02] 2025-12-20 17:14:30,488 | INFO     | aborting job monitoring since job object (job id=6934988249) has expired
[2025-12-20 18:15:02] 2025-12-20 17:14:31,465 | INFO     | --- collectZombieJob: --- 10, [848451]
[2025-12-20 18:15:02] 2025-12-20 17:14:31,465 | INFO     | zombie collector waiting for pid 848451
[2025-12-20 18:15:02] 2025-12-20 17:14:31,465 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-20 18:15:02] 2025-12-20 17:14:31,465 | INFO     | collected zombie processes
[2025-12-20 18:15:02] 2025-12-20 17:14:31,465 | INFO     | will attempt to kill all subprocesses of pid=848451
[2025-12-20 18:15:02] 2025-12-20 17:14:31,507 | INFO     | process IDs to be killed: [848451] (in reverse order)
[2025-12-20 18:15:02] 2025-12-20 17:14:31,538 | WARNING  | found no corresponding commands to process id(s)
[2025-12-20 18:15:02] 2025-12-20 17:14:31,538 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-20 18:15:02] 2025-12-20 17:14:31,540 | INFO     | did not find any defunct processes belonging to 848451
[2025-12-20 18:15:02] 2025-12-20 17:14:31,542 | INFO     | did not find any defunct processes belonging to 848451
[2025-12-20 18:15:02] 2025-12-20 17:14:31,542 | INFO     | ready for new job
[2025-12-20 18:15:02] 2025-12-20 17:14:31,542 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-20 18:15:02] 2025-12-20 17:14:31,542 | INFO     | ***************************************
[2025-12-20 18:15:02] 2025-12-20 17:14:31,542 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-20 18:15:02] 2025-12-20 17:14:31,543 | INFO     | ***************************************
[2025-12-20 18:15:02] 2025-12-20 17:14:31,543 | INFO     | 
[2025-12-20 18:15:02] 2025-12-20 17:14:31,543 | INFO     | architecture information:
[2025-12-20 18:15:02] 2025-12-20 17:14:31,543 | INFO     | executing command: cat /etc/os-release
[2025-12-20 18:15:02] 2025-12-20 17:14:31,556 | INFO     | cat /etc/os-release:
[2025-12-20 18:15:02] NAME="CentOS Linux"
[2025-12-20 18:15:02] VERSION="7 (Core)"
[2025-12-20 18:15:02] ID="centos"
[2025-12-20 18:15:02] ID_LIKE="rhel fedora"
[2025-12-20 18:15:02] VERSION_ID="7"
[2025-12-20 18:15:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-20 18:15:02] ANSI_COLOR="0;31"
[2025-12-20 18:15:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-20 18:15:02] HOME_URL="https://www.centos.org/"
[2025-12-20 18:15:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-20 18:15:02] 
[2025-12-20 18:15:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-20 18:15:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-20 18:15:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-20 18:15:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-20 18:15:02] 
[2025-12-20 18:15:02] 2025-12-20 17:14:31,557 | INFO     | ***************************************
[2025-12-20 18:15:02] 2025-12-20 17:14:32,060 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-20 18:15:02] 2025-12-20 17:14:32,077 | INFO     | sufficient remaining disk space (239713910784 B)
[2025-12-20 18:15:02] 2025-12-20 17:14:32,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-20 18:15:02] 2025-12-20 17:14:32,077 | INFO     | current server update state: UPDATING_FINAL
[2025-12-20 18:15:02] 2025-12-20 17:14:32,077 | INFO     | update_server=False
[2025-12-20 18:15:02] 2025-12-20 17:14:32,077 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-20 18:15:02] 2025-12-20 17:14:32,077 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-20 18:15:02] 2025-12-20 17:14:32,077 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-20 18:15:02] 2025-12-20 17:14:32,077 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-20 18:15:02] 2025-12-20 17:14:32,077 | INFO     | aborting loop
[2025-12-20 18:15:02] 2025-12-20 17:14:32,748 | INFO     | all payload control threads have been joined
[2025-12-20 18:15:02] 2025-12-20 17:14:32,799 | INFO     | all data control threads have been joined
[2025-12-20 18:15:02] 2025-12-20 17:14:33,083 | INFO     | [job] retrieve thread has finished
[2025-12-20 18:15:02] 2025-12-20 17:14:33,083 | INFO     | [job] queue monitor thread has finished
[2025-12-20 18:15:02] 2025-12-20 17:14:33,083 | INFO     | [job] job monitor thread has finished
[2025-12-20 18:15:02] 2025-12-20 17:14:33,141 | INFO     | all job control threads have been joined
[2025-12-20 18:15:02] 2025-12-20 17:14:33,275 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-20 18:15:02] 2025-12-20 17:14:33,278 | INFO     | [data] copytool_in thread has finished
[2025-12-20 18:15:02] 2025-12-20 17:14:33,605 | INFO     | [payload] failed_post thread has finished
[2025-12-20 18:15:02] 2025-12-20 17:14:33,754 | INFO     | [payload] control thread has finished
[2025-12-20 18:15:02] 2025-12-20 17:14:33,774 | INFO     | [payload] execute_payloads thread has finished
[2025-12-20 18:15:02] 2025-12-20 17:14:33,805 | INFO     | [data] control thread has finished
[2025-12-20 18:15:02] 2025-12-20 17:14:34,147 | INFO     | [job] control thread has finished
[2025-12-20 18:15:02] 2025-12-20 17:14:34,241 | INFO     | [job] validate thread has finished
[2025-12-20 18:15:02] 2025-12-20 17:14:34,369 | INFO     | [job] create_data_payload thread has finished
[2025-12-20 18:15:02] 2025-12-20 17:14:34,415 | INFO     | [payload] validate_post thread has finished
[2025-12-20 18:15:02] 2025-12-20 17:14:34,437 | INFO     | [payload] validate_pre thread has finished
[2025-12-20 18:15:02] 2025-12-20 17:14:35,281 | INFO     | [data] copytool_out thread has finished
[2025-12-20 18:15:02] 2025-12-20 17:14:36,084 | INFO     | [data] queue_monitor thread has finished
[2025-12-20 18:15:02] 2025-12-20 17:14:43,045 | INFO     | job.realtimelogging is not enabled
[2025-12-20 18:15:02] 2025-12-20 17:14:44,051 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-20 18:15:02] 2025-12-20 17:14:44,645 | INFO     | [monitor] cgroup control has ended
[2025-12-20 18:15:02] 2025-12-20 17:14:46,427 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140327641261888)>', '<ExcThread(monitor, started 140326765319936)>']
[2025-12-20 18:15:02] 2025-12-20 17:14:51,453 | INFO     | all workflow threads have been joined
[2025-12-20 18:15:02] 2025-12-20 17:14:51,453 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-20 18:15:02] 2025-12-20 17:14:51,453 | INFO     | traces error code: 0
[2025-12-20 18:15:02] 2025-12-20 17:14:51,453 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-20 18:15:02] 2025-12-20 17:15:02,164 | INFO     | PID=841870 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-20 18:15:02] 2025-12-20 17:15:02,165 | INFO     | found 0 job(s) in 20 queues
[2025-12-20 18:15:02] 2025-12-20 17:15:02,165 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-20 18:15:02] 2025-12-20 17:15:02,165 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-20 18:15:02] 2025-12-20 17:15:02,165 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-20 18:15:02] 2025-12-20 17:15:02,165 | INFO     | [monitor] control thread has ended
[2025-12-20 18:15:02] 2025-12-20 17:15:02,240 [wrapper] ==== pilot stdout END ====
[2025-12-20 18:15:02] 2025-12-20 17:15:02,243 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-20 18:15:02] 2025-12-20 17:15:02,247 [wrapper] pilotpid: 841870
[2025-12-20 18:15:02] 2025-12-20 17:15:02,251 [wrapper] Pilot exit status: 0
[2025-12-20 18:15:02] 2025-12-20 17:15:02,262 [wrapper] pandaids: 6934988249
[2025-12-20 18:15:02] 2025-12-20 17:15:02,282 [wrapper] cleanup supervisor_pilot  858118 841871
[2025-12-20 18:15:02] 2025-12-20 17:15:02,286 [wrapper] Test setup, not cleaning
[2025-12-20 18:15:02] 2025-12-20 17:15:02,290 [wrapper] apfmon messages muted
[2025-12-20 18:15:02] 2025-12-20 17:15:02,293 [wrapper] ==== wrapper stdout END ====
[2025-12-20 18:15:02] 2025-12-20 17:15:02,297 [wrapper] ==== wrapper stderr END ====
[2025-12-20 18:15:02]  *** Error codes and diagnostics ***
[2025-12-20 18:15:02]     "exeErrorCode": 0,
[2025-12-20 18:15:02]     "exeErrorDiag": "",
[2025-12-20 18:15:02]     "pilotErrorCode": 0,
[2025-12-20 18:15:02]     "pilotErrorDiag": "",
[2025-12-20 18:15:02]  *** Listing of results directory ***
[2025-12-20 18:15:02] total 426544
[2025-12-20 18:15:02] -rw-r--r-- 1 boinc boinc    579449 Dec 19 06:06 pilot3.tar.gz
[2025-12-20 18:15:02] -rw-r--r-- 1 boinc boinc      5112 Dec 19 06:06 queuedata.json
[2025-12-20 18:15:02] -rwx------ 1 boinc boinc     36322 Dec 19 06:06 runpilot2-wrapper.sh
[2025-12-20 18:15:02] -rw-r--r-- 1 boinc boinc       100 Dec 20 17:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-20 18:15:02] -rwxr-xr-x 1 boinc boinc      7986 Dec 20 17:04 run_atlas
[2025-12-20 18:15:02] -rw-r--r-- 1 boinc boinc       105 Dec 20 17:04 job.xml
[2025-12-20 18:15:02] -rw-r--r-- 2 boinc boinc 249179641 Dec 20 17:04 EVNT.47929278._000028.pool.root.1
[2025-12-20 18:15:02] -rw-r--r-- 2 boinc boinc    592409 Dec 20 17:04 input.tar.gz
[2025-12-20 18:15:02] -rw-r--r-- 2 boinc boinc     15847 Dec 20 17:04 start_atlas.sh
[2025-12-20 18:15:02] drwxrwx--x 2 boinc boinc      4096 Dec 20 17:04 shared
[2025-12-20 18:15:02] -rw-r--r-- 1 boinc boinc         0 Dec 20 17:04 boinc_setup_complete
[2025-12-20 18:15:02] -rw-r--r-- 1 boinc boinc      6377 Dec 20 17:04 init_data.xml
[2025-12-20 18:15:02] -rw-r--r-- 1 boinc boinc         0 Dec 20 17:04 boinc_lockfile
[2025-12-20 18:15:02] -rw-r--r-- 1 boinc boinc      2565 Dec 20 17:04 pandaJob.out
[2025-12-20 18:15:02] -rw------- 1 boinc boinc    988154 Dec 20 17:04 agis_schedconf.cvmfs.json
[2025-12-20 18:15:02] -rw------- 1 boinc boinc   1516240 Dec 20 17:04 agis_ddmendpoints.agis.ALL.json
[2025-12-20 18:15:02] drwx------ 5 boinc boinc      4096 Dec 20 17:04 pilot3
[2025-12-20 18:15:02] -rw------- 1 boinc boinc 181944344 Dec 20 18:14 HITS.47929280._000404.pool.root.1
[2025-12-20 18:15:02] -rw-r--r-- 1 boinc boinc       529 Dec 20 18:14 boinc_task_state.xml
[2025-12-20 18:15:02] -rw------- 1 boinc boinc      1018 Dec 20 18:14 memory_monitor_summary.json
[2025-12-20 18:15:02] -rw------- 1 boinc boinc    246760 Dec 20 18:14 log.47929280._000404.job.log.tgz.1
[2025-12-20 18:15:02] -rw------- 1 boinc boinc      7765 Dec 20 18:14 heartbeat.json
[2025-12-20 18:15:02] -rw-r--r-- 1 boinc boinc        27 Dec 20 18:14 wrapper_checkpoint.txt
[2025-12-20 18:15:02] -rw-r--r-- 1 boinc boinc      8192 Dec 20 18:14 boinc_mmap_file
[2025-12-20 18:15:02] -rw------- 1 boinc boinc       746 Dec 20 18:15 pilotlog.txt
[2025-12-20 18:15:02] -rw------- 1 boinc boinc        95 Dec 20 18:15 pilot_heartbeat.json
[2025-12-20 18:15:02] -rw------- 1 boinc boinc    623846 Dec 20 18:15 log.47929280._000404.job.log.1
[2025-12-20 18:15:02] -rw------- 1 boinc boinc       357 Dec 20 18:15 output.list
[2025-12-20 18:15:02] -rw-r--r-- 1 boinc boinc       620 Dec 20 18:15 runtime_log
[2025-12-20 18:15:02] -rw------- 1 boinc boinc    890880 Dec 20 18:15 result.tar.gz
[2025-12-20 18:15:02] -rw-r--r-- 1 boinc boinc      8902 Dec 20 18:15 runtime_log.err
[2025-12-20 18:15:02] -rw------- 1 boinc boinc       659 Dec 20 18:15 IMpMDmUshq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjYaKDmCQ5ggn.diag
[2025-12-20 18:15:02] -rw-r--r-- 1 boinc boinc     22589 Dec 20 18:15 stderr.txt
[2025-12-20 18:15:02] HITS file was successfully produced:
[2025-12-20 18:15:02] -rw------- 1 boinc boinc 181944344 Dec 20 18:14 shared/HITS.pool.root.1
[2025-12-20 18:15:02]  *** Contents of shared directory: ***
[2025-12-20 18:15:02] total 422500
[2025-12-20 18:15:02] -rw-r--r-- 2 boinc boinc 249179641 Dec 20 17:04 ATLAS.root_0
[2025-12-20 18:15:02] -rw-r--r-- 2 boinc boinc    592409 Dec 20 17:04 input.tar.gz
[2025-12-20 18:15:02] -rw-r--r-- 2 boinc boinc     15847 Dec 20 17:04 start_atlas.sh
[2025-12-20 18:15:02] -rw------- 1 boinc boinc 181944344 Dec 20 18:14 HITS.pool.root.1
[2025-12-20 18:15:02] -rw------- 1 boinc boinc    890880 Dec 20 18:15 result.tar.gz
18:15:04 (838075): run_atlas exited; CPU time 15764.942193
18:15:04 (838075): called boinc_finish(0)

</stderr_txt>
]]>

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