Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:53:07 (3622686): wrapper (7.7.26015): starting
11:53:07 (3622686): wrapper: running run_atlas (--nthreads 4)
[2025-12-20 11:53:07] Arguments: --nthreads 4
[2025-12-20 11:53:07] Threads: 4
[2025-12-20 11:53:07] Checking for CVMFS
[2025-12-20 11:53:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-20 11:53:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-20 11:53:07] Running cvmfs_config stat atlas.cern.ch
[2025-12-20 11:53:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-20 11:53:07] 2.9.2.0 504409 10416 98516 154222 3 57 21671665 36864001 0 130560 0 8183782 99.991 378351 11367 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-20 11:53:07] CVMFS is ok
[2025-12-20 11:53:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-20 11:53:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-20 11:53:07] Further information can be found at the LHC@home message board.
[2025-12-20 11:53:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-20 11:53:07] Checking for apptainer binary...
[2025-12-20 11:53:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-20 11:53:07] Running /usr/bin/apptainer --version
[2025-12-20 11:53:07] apptainer version 1.4.1-1.1
[2025-12-20 11:53:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-20 11:53:07] thA314a
[2025-12-20 11:53:07] apptainer works
[2025-12-20 11:53:07] Set ATHENA_PROC_NUMBER=4
[2025-12-20 11:53:07] Set ATHENA_CORE_NUMBER=4
[2025-12-20 11:53:07] Starting ATLAS job with PandaID=6934702906
[2025-12-20 11:53:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-20 20:55:05]  *** The last 200 lines of the pilot log: ***
[2025-12-20 20:55:05] 2025-12-20 19:54:59,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140488641566528)>', '<ExcThread(monitor, started 140487642052352)>']
[2025-12-20 20:55:05] 2025-12-20 19:55:04,347 | INFO     | all workflow threads have been joined
[2025-12-20 20:55:05] 2025-12-20 19:55:04,348 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-20 20:55:05] 2025-12-20 19:55:04,348 | INFO     | traces error code: 0
[2025-12-20 20:55:05] 2025-12-20 19:55:04,348 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-20 20:55:05] 2025-12-20 19:55:05,298 | INFO     | PID=3626486 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-20 20:55:05] 2025-12-20 19:55:05,299 | INFO     | found 0 job(s) in 20 queues
[2025-12-20 20:55:05] 2025-12-20 19:55:05,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-20 20:55:05] 2025-12-20 19:55:05,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-20 20:55:05] 2025-12-20 19:55:05,299 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-20 20:55:05] 2025-12-20 19:55:05,299 | CRITICAL | thread 'MainThread' is not alive
[2025-12-20 20:55:05] 2025-12-20 19:55:05,299 | INFO     | [monitor] control thread has ended
[2025-12-20 20:55:05] 2025-12-20 19:55:05,363 [wrapper] ==== pilot stdout END ====
[2025-12-20 20:55:05] 2025-12-20 19:55:05,367 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-20 20:55:05] 2025-12-20 19:55:05,371 [wrapper] pilotpid: 3626486
[2025-12-20 20:55:05] 2025-12-20 19:55:05,375 [wrapper] Pilot exit status: 0
[2025-12-20 20:55:05] 2025-12-20 19:55:05,386 [wrapper] pandaids: 6934702906
[2025-12-20 20:55:05] 2025-12-20 19:55:05,407 [wrapper] cleanup supervisor_pilot 3688387 3626487
[2025-12-20 20:55:05] 2025-12-20 19:55:05,410 [wrapper] Test setup, not cleaning
[2025-12-20 20:55:05] 2025-12-20 19:55:05,414 [wrapper] apfmon messages muted
[2025-12-20 20:55:05] 2025-12-20 19:55:05,417 [wrapper] ==== wrapper stdout END ====
[2025-12-20 20:55:05] 2025-12-20 19:55:05,421 [wrapper] ==== wrapper stderr END ====
[2025-12-20 20:55:05]  *** Error codes and diagnostics ***
[2025-12-20 20:55:05]     "exeErrorCode": 0,
[2025-12-20 20:55:05]     "exeErrorDiag": "",
[2025-12-20 20:55:05]     "pilotErrorCode": 0,
[2025-12-20 20:55:05]     "pilotErrorDiag": "",
[2025-12-20 20:55:05]  *** Listing of results directory ***
[2025-12-20 20:55:05] total 1401632
[2025-12-20 20:55:05] -rw-r--r-- 1 boinc boinc     579449 Dec 19 03:02 pilot3.tar.gz
[2025-12-20 20:55:05] -rwx------ 1 boinc boinc      36322 Dec 19 03:04 runpilot2-wrapper.sh
[2025-12-20 20:55:05] -rw-r--r-- 1 boinc boinc       5112 Dec 19 03:05 queuedata.json
[2025-12-20 20:55:05] -rw-r--r-- 1 boinc boinc        100 Dec 20 11:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-20 20:55:05] -rwxr-xr-x 1 boinc boinc       7986 Dec 20 11:53 run_atlas
[2025-12-20 20:55:05] -rw-r--r-- 1 boinc boinc        105 Dec 20 11:53 job.xml
[2025-12-20 20:55:05] -rw-r--r-- 2 boinc boinc  414925925 Dec 20 11:53 EVNT.47960986._000053.pool.root.1
[2025-12-20 20:55:05] drwxrwx--x 2 boinc boinc       4096 Dec 20 11:53 shared
[2025-12-20 20:55:05] -rw-r--r-- 2 boinc boinc     592597 Dec 20 11:53 input.tar.gz
[2025-12-20 20:55:05] -rw-r--r-- 2 boinc boinc      15847 Dec 20 11:53 start_atlas.sh
[2025-12-20 20:55:05] -rw-r--r-- 1 boinc boinc          0 Dec 20 11:53 boinc_setup_complete
[2025-12-20 20:55:05] -rw-r--r-- 1 boinc boinc       6371 Dec 20 11:53 init_data.xml
[2025-12-20 20:55:05] -rw-r--r-- 1 boinc boinc          0 Dec 20 11:53 boinc_lockfile
[2025-12-20 20:55:05] -rw-r--r-- 1 boinc boinc       2877 Dec 20 11:53 pandaJob.out
[2025-12-20 20:55:05] -rw------- 1 boinc boinc     988138 Dec 20 11:53 agis_schedconf.cvmfs.json
[2025-12-20 20:55:05] drwx------ 5 boinc boinc       4096 Dec 20 11:53 pilot3
[2025-12-20 20:55:05] -rw-r--r-- 1 boinc boinc        533 Dec 20 20:51 boinc_task_state.xml
[2025-12-20 20:55:05] -rw------- 1 boinc boinc 1004611624 Dec 20 20:54 HITS.47960988._000279.pool.root.1
[2025-12-20 20:55:05] -rw------- 1 boinc boinc         95 Dec 20 20:54 pilot_heartbeat.json
[2025-12-20 20:55:05] -rw------- 1 boinc boinc       1029 Dec 20 20:54 memory_monitor_summary.json
[2025-12-20 20:55:05] -rw------- 1 boinc boinc    1516240 Dec 20 20:54 agis_ddmendpoints.agis.ALL.json
[2025-12-20 20:55:05] -rw------- 1 boinc boinc    1347581 Dec 20 20:54 log.47960988._000279.job.log.tgz.1
[2025-12-20 20:55:05] -rw------- 1 boinc boinc       8578 Dec 20 20:54 heartbeat.json
[2025-12-20 20:55:05] -rw-r--r-- 1 boinc boinc       8192 Dec 20 20:55 boinc_mmap_file
[2025-12-20 20:55:05] -rw-r--r-- 1 boinc boinc         29 Dec 20 20:55 wrapper_checkpoint.txt
[2025-12-20 20:55:05] -rw------- 1 boinc boinc        817 Dec 20 20:55 pilotlog.txt
[2025-12-20 20:55:05] -rw------- 1 boinc boinc    4567863 Dec 20 20:55 log.47960988._000279.job.log.1
[2025-12-20 20:55:05] -rw------- 1 boinc boinc        353 Dec 20 20:55 output.list
[2025-12-20 20:55:05] -rw-r--r-- 1 boinc boinc        620 Dec 20 20:55 runtime_log
[2025-12-20 20:55:05] -rw------- 1 boinc boinc    5939200 Dec 20 20:55 result.tar.gz
[2025-12-20 20:55:05] -rw-r--r-- 1 boinc boinc       8903 Dec 20 20:55 runtime_log.err
[2025-12-20 20:55:05] -rw------- 1 boinc boinc        667 Dec 20 20:55 39BLDm81eq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4DfKDmOBpdEn.diag
[2025-12-20 20:55:05] -rw-r--r-- 1 boinc boinc       4712 Dec 20 20:55 stderr.txt
[2025-12-20 20:55:05] HITS file was successfully produced:
[2025-12-20 20:55:05] -rw------- 1 boinc boinc 1004611624 Dec 20 20:54 shared/HITS.pool.root.1
[2025-12-20 20:55:05]  *** Contents of shared directory: ***
[2025-12-20 20:55:05] total 1392676
[2025-12-20 20:55:05] -rw-r--r-- 2 boinc boinc  414925925 Dec 20 11:53 ATLAS.root_0
[2025-12-20 20:55:05] -rw-r--r-- 2 boinc boinc     592597 Dec 20 11:53 input.tar.gz
[2025-12-20 20:55:05] -rw-r--r-- 2 boinc boinc      15847 Dec 20 11:53 start_atlas.sh
[2025-12-20 20:55:05] -rw------- 1 boinc boinc 1004611624 Dec 20 20:54 HITS.pool.root.1
[2025-12-20 20:55:05] -rw------- 1 boinc boinc    5939200 Dec 20 20:55 result.tar.gz
20:55:06 (3622686): run_atlas exited; CPU time 127982.783118
20:55:06 (3622686): called boinc_finish(0)

</stderr_txt>
]]>

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