Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:34:28 (618208): wrapper (7.7.26015): starting
00:34:28 (618208): wrapper: running run_atlas (--nthreads 3)
[2025-12-20 00:34:28] Arguments: --nthreads 3
[2025-12-20 00:34:28] Threads: 3
[2025-12-20 00:34:28] Checking for CVMFS
[2025-12-20 00:34:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-20 00:34:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-20 00:34:28] Running cvmfs_config stat atlas.cern.ch
[2025-12-20 00:34:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-20 00:34:29] 2.9.2.0 3111 2051 78444 154206 0 56 22849679 36864000 0 130560 0 1396676 99.990 75291 21931 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-20 00:34:29] CVMFS is ok
[2025-12-20 00:34:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-20 00:34:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-20 00:34:29] Further information can be found at the LHC@home message board.
[2025-12-20 00:34:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-20 00:34:29] Checking for apptainer binary...
[2025-12-20 00:34:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-20 00:34:29] Running /usr/bin/apptainer --version
[2025-12-20 00:34:29] apptainer version 1.4.1-1.1
[2025-12-20 00:34:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-20 00:34:29] legendA163
[2025-12-20 00:34:29] apptainer works
[2025-12-20 00:34:29] Set ATHENA_PROC_NUMBER=3
[2025-12-20 00:34:29] Set ATHENA_CORE_NUMBER=3
[2025-12-20 00:34:29] Starting ATLAS job with PandaID=6934701615
[2025-12-20 00:34:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-20 11:10:24]  *** The last 200 lines of the pilot log: ***
[2025-12-20 11:10:24] 2025-12-20 10:09:39,678 | INFO     | monitor loop #2895: job 0:6934701615 is in state 'finished'
[2025-12-20 11:10:24] 2025-12-20 10:09:39,678 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-20 11:10:24] 2025-12-20 10:09:40,803 | INFO     | time since job start (38105s) is within the limit (174528.0s)
[2025-12-20 11:10:24] 2025-12-20 10:09:41,782 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-20 11:10:24] 2025-12-20 10:09:41,783 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3868.40925
[2025-12-20 11:10:24] 2025-12-20 10:09:41,784 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6934701615/memory_monitor_summary.json (trf name=prmon)
[2025-12-20 11:10:24] 2025-12-20 10:09:41,785 | INFO     | extracted standard info from prmon json
[2025-12-20 11:10:24] 2025-12-20 10:09:41,785 | INFO     | extracted standard memory fields from prmon json
[2025-12-20 11:10:24] 2025-12-20 10:09:41,785 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-20 11:10:24] 2025-12-20 10:09:41,788 | INFO     | fitting pss+swap vs Time
[2025-12-20 11:10:24] 2025-12-20 10:09:41,788 | INFO     | sum of square deviations: 75703745000.0
[2025-12-20 11:10:24] 2025-12-20 10:09:41,791 | INFO     | sum of deviations: 286511325840.9998
[2025-12-20 11:10:24] 2025-12-20 10:09:41,791 | INFO     | mean x: 1766206328.0
[2025-12-20 11:10:24] 2025-12-20 10:09:41,791 | INFO     | mean y: 2218255.3008
[2025-12-20 11:10:24] 2025-12-20 10:09:41,791 | INFO     | intersect: -6682234630.6699505
[2025-12-20 11:10:24] 2025-12-20 10:09:41,792 | INFO     | chi2: 4.577373910206872
[2025-12-20 11:10:24] 2025-12-20 10:09:41,792 | INFO     | sum of square deviations: 73901348415.0
[2025-12-20 11:10:24] 2025-12-20 10:09:41,795 | INFO     | sum of deviations: 401540158946.4998
[2025-12-20 11:10:24] 2025-12-20 10:09:41,795 | INFO     | mean x: 1766206175.5
[2025-12-20 11:10:24] 2025-12-20 10:09:41,795 | INFO     | mean y: 2227965.708064516
[2025-12-20 11:10:24] 2025-12-20 10:09:41,796 | INFO     | intersect: -9594385948.018717
[2025-12-20 11:10:24] 2025-12-20 10:09:41,796 | INFO     | chi2: 2.499723176460267
[2025-12-20 11:10:24] 2025-12-20 10:09:41,796 | INFO     | current chi2=2.499723176460267 (change=45.38957870830147 %)
[2025-12-20 11:10:24] 2025-12-20 10:09:41,796 | INFO     | sum of square deviations: 72127789580.0
[2025-12-20 11:10:24] 2025-12-20 10:09:41,799 | INFO     | sum of deviations: 398505108673.99994
[2025-12-20 11:10:24] 2025-12-20 10:09:41,799 | INFO     | mean x: 1766206023.0
[2025-12-20 11:10:24] 2025-12-20 10:09:41,799 | INFO     | mean y: 2227702.5479674796
[2025-12-20 11:10:24] 2025-12-20 10:09:41,800 | INFO     | intersect: -9756037831.925774
[2025-12-20 11:10:24] 2025-12-20 10:09:41,800 | INFO     | chi2: 2.4903004885344973
[2025-12-20 11:10:24] 2025-12-20 10:09:41,800 | INFO     | current chi2=2.4903004885344973 (change=0.3769492564017805 %)
[2025-12-20 11:10:24] 2025-12-20 10:09:41,800 | INFO     | right removable region: 614
[2025-12-20 11:10:24] 2025-12-20 10:09:41,800 | INFO     | sum of square deviations: 73901348415.0
[2025-12-20 11:10:24] 2025-12-20 10:09:41,804 | INFO     | sum of deviations: 154788519615.00003
[2025-12-20 11:10:24] 2025-12-20 10:09:41,804 | INFO     | mean x: 1766206480.5
[2025-12-20 11:10:24] 2025-12-20 10:09:41,804 | INFO     | mean y: 2229387.564516129
[2025-12-20 11:10:24] 2025-12-20 10:09:41,804 | INFO     | intersect: -3697141358.9038105
[2025-12-20 11:10:24] 2025-12-20 10:09:41,804 | INFO     | chi2: 2.4936629986592314
[2025-12-20 11:10:24] 2025-12-20 10:09:41,804 | INFO     | current chi2=2.4936629986592314 (change=45.52197291336133 %)
[2025-12-20 11:10:24] 2025-12-20 10:09:41,804 | INFO     | sum of square deviations: 72127789580.0
[2025-12-20 11:10:24] 2025-12-20 10:09:41,807 | INFO     | sum of deviations: 112040977557.00003
[2025-12-20 11:10:24] 2025-12-20 10:09:41,807 | INFO     | mean x: 1766206633.0
[2025-12-20 11:10:24] 2025-12-20 10:09:41,807 | INFO     | mean y: 2233051.095934959
[2025-12-20 11:10:24] 2025-12-20 10:09:41,807 | INFO     | intersect: -2741335258.445731
[2025-12-20 11:10:24] 2025-12-20 10:09:41,807 | INFO     | chi2: 2.1898083836177125
[2025-12-20 11:10:24] 2025-12-20 10:09:41,807 | INFO     | current chi2=2.1898083836177125 (change=12.185071326995368 %)
[2025-12-20 11:10:24] 2025-12-20 10:09:41,807 | INFO     | left removable region: 20
[2025-12-20 11:10:24] 2025-12-20 10:09:41,808 | INFO     | sum of square deviations: 64988502232.5
[2025-12-20 11:10:24] 2025-12-20 10:09:41,811 | INFO     | sum of deviations: 201438509406.00076
[2025-12-20 11:10:24] 2025-12-20 10:09:41,811 | INFO     | mean x: 1766206602.5
[2025-12-20 11:10:24] 2025-12-20 10:09:41,811 | INFO     | mean y: 2244860.855218855
[2025-12-20 11:10:24] 2025-12-20 10:09:41,811 | INFO     | intersect: -5472293143.387544
[2025-12-20 11:10:24] 2025-12-20 10:09:41,811 | INFO     | chi2: 0.07652822555810918
[2025-12-20 11:10:24] 2025-12-20 10:09:41,811 | INFO     | current memory leak: 3.10 B/s (using 594 data points, chi2=0.08)
[2025-12-20 11:10:24] 2025-12-20 10:09:41,812 | INFO     | could have reported an average CPU frequency of 3939 MHz (25 samples)
[2025-12-20 11:10:24] 2025-12-20 10:09:41,812 | INFO     | ..............................
[2025-12-20 11:10:24] 2025-12-20 10:09:41,812 | INFO     | . Timing measurements:
[2025-12-20 11:10:24] 2025-12-20 10:09:41,812 | INFO     | . get job = 0 s
[2025-12-20 11:10:24] 2025-12-20 10:09:41,812 | INFO     | . initial setup = 1 s
[2025-12-20 11:10:24] 2025-12-20 10:09:41,812 | INFO     | . payload setup = 3 s
[2025-12-20 11:10:24] 2025-12-20 10:09:41,812 | INFO     | . stage-in = 0 s
[2025-12-20 11:10:24] 2025-12-20 10:09:41,812 | INFO     | . payload execution = 38079 s
[2025-12-20 11:10:24] 2025-12-20 10:09:41,812 | INFO     | . stage-out = 1 s
[2025-12-20 11:10:24] 2025-12-20 10:09:41,812 | INFO     | . log creation = 0 s
[2025-12-20 11:10:24] 2025-12-20 10:09:41,812 | INFO     | ..............................
[2025-12-20 11:10:24] 2025-12-20 10:09:41,843 | INFO     | 
[2025-12-20 11:10:24] 2025-12-20 10:09:41,843 | INFO     | job summary report
[2025-12-20 11:10:24] 2025-12-20 10:09:41,843 | INFO     | --------------------------------------------------
[2025-12-20 11:10:24] 2025-12-20 10:09:41,843 | INFO     | PanDA job id: 6934701615
[2025-12-20 11:10:24] 2025-12-20 10:09:41,843 | INFO     | task id: 47960988
[2025-12-20 11:10:24] 2025-12-20 10:09:41,843 | INFO     | errors: (none)
[2025-12-20 11:10:24] 2025-12-20 10:09:41,843 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-20 11:10:24] 2025-12-20 10:09:41,843 | INFO     | pilot state: finished 
[2025-12-20 11:10:24] 2025-12-20 10:09:41,843 | INFO     | transexitcode: 0
[2025-12-20 11:10:24] 2025-12-20 10:09:41,843 | INFO     | exeerrorcode: 0
[2025-12-20 11:10:24] 2025-12-20 10:09:41,843 | INFO     | exeerrordiag: 
[2025-12-20 11:10:24] 2025-12-20 10:09:41,843 | INFO     | exitcode: 0
[2025-12-20 11:10:24] 2025-12-20 10:09:41,843 | INFO     | exitmsg: OK
[2025-12-20 11:10:24] 2025-12-20 10:09:41,843 | INFO     | cpuconsumptiontime: 112743 s
[2025-12-20 11:10:24] 2025-12-20 10:09:41,843 | INFO     | nevents: 1000
[2025-12-20 11:10:24] 2025-12-20 10:09:41,843 | INFO     | neventsw: 0
[2025-12-20 11:10:24] 2025-12-20 10:09:41,843 | INFO     | pid: 628400
[2025-12-20 11:10:24] 2025-12-20 10:09:41,843 | INFO     | pgrp: 628400
[2025-12-20 11:10:24] 2025-12-20 10:09:41,844 | INFO     | corecount: 3
[2025-12-20 11:10:24] 2025-12-20 10:09:41,844 | INFO     | event service: False
[2025-12-20 11:10:24] 2025-12-20 10:09:41,844 | INFO     | sizes: {0: 2284600, 3: 2284862, 11: 2284890, 38086: 2328184, 38088: 2337184, 38089: 2337240, 38094: 2337678}
[2025-12-20 11:10:24] 2025-12-20 10:09:41,844 | INFO     | --------------------------------------------------
[2025-12-20 11:10:24] 2025-12-20 10:09:41,844 | INFO     | 
[2025-12-20 11:10:24] 2025-12-20 10:09:41,844 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-20 11:10:24] 2025-12-20 10:09:41,855 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-20 11:10:24] 2025-12-20 10:09:41,856 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-20 11:10:24] 2025-12-20 10:09:41,856 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-20 11:10:24] 2025-12-20 10:09:41,856 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-20 11:10:24] 2025-12-20 10:09:41,856 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-20 11:10:24] 2025-12-20 10:09:41,856 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-20 11:10:24] 2025-12-20 10:09:41,856 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-20 11:10:24] 2025-12-20 10:09:41,856 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-20 11:10:24] 2025-12-20 10:09:41,856 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-20 11:10:24] 2025-12-20 10:09:41,856 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-20 11:10:24] 2025-12-20 10:09:41,856 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-20 11:10:24] 2025-12-20 10:09:41,856 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-20 11:10:24] 2025-12-20 10:09:41,856 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-20 11:10:24] 2025-12-20 10:09:41,856 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-20 11:10:24] 2025-12-20 10:09:41,856 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-20 11:10:24] 2025-12-20 10:09:41,856 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-20 11:10:24] 2025-12-20 10:09:41,856 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-20 11:10:24] 2025-12-20 10:09:41,856 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-20 11:10:24] 2025-12-20 10:09:41,857 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-20 11:10:24] 2025-12-20 10:09:41,857 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-20 11:10:24] 2025-12-20 10:09:41,857 | INFO     | job 6934701615 has completed (purged errors)
[2025-12-20 11:10:24] 2025-12-20 10:09:41,857 | INFO     | overall cleanup function is called
[2025-12-20 11:10:24] 2025-12-20 10:09:41,920 | INFO     | PID=621934 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-20 11:10:24] 2025-12-20 10:09:42,868 | INFO     | --- collectZombieJob: --- 10, [628400]
[2025-12-20 11:10:24] 2025-12-20 10:09:42,868 | INFO     | zombie collector waiting for pid 628400
[2025-12-20 11:10:24] 2025-12-20 10:09:42,868 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-20 11:10:24] 2025-12-20 10:09:42,868 | INFO     | collected zombie processes
[2025-12-20 11:10:24] 2025-12-20 10:09:42,868 | INFO     | will attempt to kill all subprocesses of pid=628400
[2025-12-20 11:10:24] 2025-12-20 10:09:42,922 | INFO     | process IDs to be killed: [628400] (in reverse order)
[2025-12-20 11:10:24] 2025-12-20 10:09:42,951 | WARNING  | found no corresponding commands to process id(s)
[2025-12-20 11:10:24] 2025-12-20 10:09:42,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-20 11:10:24] 2025-12-20 10:09:42,953 | INFO     | did not find any defunct processes belonging to 628400
[2025-12-20 11:10:24] 2025-12-20 10:09:42,954 | INFO     | did not find any defunct processes belonging to 628400
[2025-12-20 11:10:24] 2025-12-20 10:09:42,954 | INFO     | ready for new job
[2025-12-20 11:10:24] 2025-12-20 10:09:42,954 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-20 11:10:24] 2025-12-20 10:09:42,956 | INFO     | ***************************************
[2025-12-20 11:10:24] 2025-12-20 10:09:42,956 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-20 11:10:24] 2025-12-20 10:09:42,956 | INFO     | ***************************************
[2025-12-20 11:10:24] 2025-12-20 10:09:42,956 | INFO     | 
[2025-12-20 11:10:24] 2025-12-20 10:09:42,956 | INFO     | architecture information:
[2025-12-20 11:10:24] 2025-12-20 10:09:42,957 | INFO     | executing command: cat /etc/os-release
[2025-12-20 11:10:24] 2025-12-20 10:09:42,966 | INFO     | cat /etc/os-release:
[2025-12-20 11:10:24] NAME="CentOS Linux"
[2025-12-20 11:10:24] VERSION="7 (Core)"
[2025-12-20 11:10:24] ID="centos"
[2025-12-20 11:10:24] ID_LIKE="rhel fedora"
[2025-12-20 11:10:24] VERSION_ID="7"
[2025-12-20 11:10:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-20 11:10:24] ANSI_COLOR="0;31"
[2025-12-20 11:10:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-20 11:10:24] HOME_URL="https://www.centos.org/"
[2025-12-20 11:10:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-20 11:10:24] 
[2025-12-20 11:10:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-20 11:10:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-20 11:10:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-20 11:10:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-20 11:10:24] 
[2025-12-20 11:10:24] 2025-12-20 10:09:42,966 | INFO     | ***************************************
[2025-12-20 11:10:24] 2025-12-20 10:09:43,470 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-20 11:10:24] 2025-12-20 10:09:43,484 | INFO     | sufficient remaining disk space (380522987520 B)
[2025-12-20 11:10:24] 2025-12-20 10:09:43,484 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-20 11:10:24] 2025-12-20 10:09:43,484 | INFO     | current server update state: UPDATING_FINAL
[2025-12-20 11:10:24] 2025-12-20 10:09:43,484 | INFO     | update_server=False
[2025-12-20 11:10:24] 2025-12-20 10:09:43,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-20 11:10:24] 2025-12-20 10:09:43,484 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-20 11:10:24] 2025-12-20 10:09:43,484 | INFO     | aborting loop
[2025-12-20 11:10:24] 2025-12-20 10:09:43,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-20 11:10:24] 2025-12-20 10:09:43,484 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-20 11:10:24] 2025-12-20 10:09:43,764 | INFO     | all job control threads have been joined
[2025-12-20 11:10:24] 2025-12-20 10:09:44,214 | INFO     | all payload control threads have been joined
[2025-12-20 11:10:24] 2025-12-20 10:09:44,221 | INFO     | all data control threads have been joined
[2025-12-20 11:10:24] 2025-12-20 10:09:44,246 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-20 11:10:24] 2025-12-20 10:09:44,490 | INFO     | [job] job monitor thread has finished
[2025-12-20 11:10:24] 2025-12-20 10:09:44,490 | INFO     | [job] queue monitor thread has finished
[2025-12-20 11:10:24] 2025-12-20 10:09:44,490 | INFO     | [job] retrieve thread has finished
[2025-12-20 11:10:24] 2025-12-20 10:09:44,770 | INFO     | [job] control thread has finished
[2025-12-20 11:10:24] 2025-12-20 10:09:44,907 | INFO     | [payload] validate_post thread has finished
[2025-12-20 11:10:24] 2025-12-20 10:09:45,220 | INFO     | [payload] control thread has finished
[2025-12-20 11:10:24] 2025-12-20 10:09:45,227 | INFO     | [data] control thread has finished
[2025-12-20 11:10:24] 2025-12-20 10:09:45,356 | INFO     | [job] validate thread has finished
[2025-12-20 11:10:24] 2025-12-20 10:09:45,399 | INFO     | [data] copytool_in thread has finished
[2025-12-20 11:10:24] 2025-12-20 10:09:45,421 | INFO     | [payload] failed_post thread has finished
[2025-12-20 11:10:24] 2025-12-20 10:09:45,537 | INFO     | [job] create_data_payload thread has finished
[2025-12-20 11:10:24] 2025-12-20 10:09:45,629 | INFO     | [payload] validate_pre thread has finished
[2025-12-20 11:10:24] 2025-12-20 10:09:45,776 | INFO     | [payload] execute_payloads thread has finished
[2025-12-20 11:10:24] 2025-12-20 10:09:46,252 | INFO     | [data] copytool_out thread has finished
[2025-12-20 11:10:24] 2025-12-20 10:09:47,492 | INFO     | [data] queue_monitor thread has finished
[2025-12-20 11:10:24] 2025-12-20 10:09:53,670 | INFO     | job.realtimelogging is not enabled
[2025-12-20 11:10:24] 2025-12-20 10:09:54,675 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-20 11:10:24] 2025-12-20 10:10:14,066 | INFO     | PID=621934 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-20 11:10:24] 2025-12-20 10:10:14,066 | INFO     | found 0 job(s) in 20 queues
[2025-12-20 11:10:24] 2025-12-20 10:10:14,066 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-20 11:10:24] 2025-12-20 10:10:14,066 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-20 11:10:24] 2025-12-20 10:10:19,096 | INFO     | [monitor] cgroup control has ended
[2025-12-20 11:10:24] 2025-12-20 10:10:19,536 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140276710119232)>', '<ExcThread(monitor, started 140276223952640)>']
[2025-12-20 11:10:24] 2025-12-20 10:10:20,096 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-20 11:10:24] 2025-12-20 10:10:20,096 | INFO     | [monitor] control thread has ended
[2025-12-20 11:10:24] 2025-12-20 10:10:24,562 | INFO     | all workflow threads have been joined
[2025-12-20 11:10:24] 2025-12-20 10:10:24,562 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-20 11:10:24] 2025-12-20 10:10:24,562 | INFO     | traces error code: 0
[2025-12-20 11:10:24] 2025-12-20 10:10:24,563 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-20 11:10:24] 2025-12-20 10:10:24,615 [wrapper] ==== pilot stdout END ====
[2025-12-20 11:10:24] 2025-12-20 10:10:24,617 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-20 11:10:24] 2025-12-20 10:10:24,620 [wrapper] pilotpid: 621934
[2025-12-20 11:10:24] 2025-12-20 10:10:24,622 [wrapper] Pilot exit status: 0
[2025-12-20 11:10:24] 2025-12-20 10:10:24,630 [wrapper] pandaids: 6934701615
[2025-12-20 11:10:24] 2025-12-20 10:10:24,651 [wrapper] cleanup supervisor_pilot  708436 621935
[2025-12-20 11:10:24] 2025-12-20 10:10:24,653 [wrapper] Test setup, not cleaning
[2025-12-20 11:10:24] 2025-12-20 10:10:24,656 [wrapper] apfmon messages muted
[2025-12-20 11:10:24] 2025-12-20 10:10:24,658 [wrapper] ==== wrapper stdout END ====
[2025-12-20 11:10:24] 2025-12-20 10:10:24,661 [wrapper] ==== wrapper stderr END ====
[2025-12-20 11:10:24]  *** Error codes and diagnostics ***
[2025-12-20 11:10:24]     "exeErrorCode": 0,
[2025-12-20 11:10:24]     "exeErrorDiag": "",
[2025-12-20 11:10:24]     "pilotErrorCode": 0,
[2025-12-20 11:10:24]     "pilotErrorDiag": "",
[2025-12-20 11:10:24]  *** Listing of results directory ***
[2025-12-20 11:10:24] total 1383728
[2025-12-20 11:10:24] -rw-r--r-- 1 boinc boinc      5112 Dec 19 03:02 queuedata.json
[2025-12-20 11:10:24] -rw-r--r-- 1 boinc boinc    579449 Dec 19 03:02 pilot3.tar.gz
[2025-12-20 11:10:24] -rwx------ 1 boinc boinc     36322 Dec 19 03:03 runpilot2-wrapper.sh
[2025-12-20 11:10:24] -rw-r--r-- 1 boinc boinc       100 Dec 20 00:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-20 11:10:24] -rwxr-xr-x 1 boinc boinc      7986 Dec 20 00:34 run_atlas
[2025-12-20 11:10:24] -rw-r--r-- 1 boinc boinc       105 Dec 20 00:34 job.xml
[2025-12-20 11:10:24] -rw-r--r-- 2 boinc boinc 414829071 Dec 20 00:34 EVNT.47960986._000009.pool.root.1
[2025-12-20 11:10:24] drwxrwx--x 2 boinc boinc      4096 Dec 20 00:34 shared
[2025-12-20 11:10:24] -rw-r--r-- 2 boinc boinc    592589 Dec 20 00:34 input.tar.gz
[2025-12-20 11:10:24] -rw-r--r-- 2 boinc boinc     15847 Dec 20 00:34 start_atlas.sh
[2025-12-20 11:10:24] -rw-r--r-- 1 boinc boinc         0 Dec 20 00:34 boinc_setup_complete
[2025-12-20 11:10:24] -rw-r--r-- 1 boinc boinc      6449 Dec 20 00:34 init_data.xml
[2025-12-20 11:10:24] -rw-r--r-- 1 boinc boinc         0 Dec 20 00:34 boinc_lockfile
[2025-12-20 11:10:24] -rw-r--r-- 1 boinc boinc      2875 Dec 20 00:34 pandaJob.out
[2025-12-20 11:10:24] -rw------- 1 boinc boinc    988138 Dec 20 00:34 agis_schedconf.cvmfs.json
[2025-12-20 11:10:24] drwx------ 5 boinc boinc      4096 Dec 20 00:34 pilot3
[2025-12-20 11:10:24] -rw-r--r-- 1 boinc boinc       532 Dec 20 11:04 boinc_task_state.xml
[2025-12-20 11:10:24] -rw------- 1 boinc boinc 984937824 Dec 20 11:09 HITS.47960988._000062.pool.root.1
[2025-12-20 11:10:24] -rw------- 1 boinc boinc        95 Dec 20 11:09 pilot_heartbeat.json
[2025-12-20 11:10:24] -rw------- 1 boinc boinc      1024 Dec 20 11:09 memory_monitor_summary.json
[2025-12-20 11:10:24] -rw------- 1 boinc boinc   1516240 Dec 20 11:09 agis_ddmendpoints.agis.ALL.json
[2025-12-20 11:10:24] -rw------- 1 boinc boinc   1282414 Dec 20 11:09 log.47960988._000062.job.log.tgz.1
[2025-12-20 11:10:24] -rw------- 1 boinc boinc      8564 Dec 20 11:09 heartbeat.json
[2025-12-20 11:10:24] -rw-r--r-- 1 boinc boinc        29 Dec 20 11:10 wrapper_checkpoint.txt
[2025-12-20 11:10:24] -rw-r--r-- 1 boinc boinc      8192 Dec 20 11:10 boinc_mmap_file
[2025-12-20 11:10:24] -rw------- 1 boinc boinc      4823 Dec 20 11:10 pilotlog.txt
[2025-12-20 11:10:24] -rw------- 1 boinc boinc   5341172 Dec 20 11:10 log.47960988._000062.job.log.1
[2025-12-20 11:10:24] -rw------- 1 boinc boinc       353 Dec 20 11:10 output.list
[2025-12-20 11:10:24] -rw-r--r-- 1 boinc boinc       620 Dec 20 11:10 runtime_log
[2025-12-20 11:10:24] -rw------- 1 boinc boinc   6645760 Dec 20 11:10 result.tar.gz
[2025-12-20 11:10:24] -rw-r--r-- 1 boinc boinc      8918 Dec 20 11:10 runtime_log.err
[2025-12-20 11:10:24] -rw------- 1 boinc boinc       670 Dec 20 11:10 ElDLDmn0eq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmI9eKDm5CSfYn.diag
[2025-12-20 11:10:24] -rw-r--r-- 1 boinc boinc     21218 Dec 20 11:10 stderr.txt
[2025-12-20 11:10:24] HITS file was successfully produced:
[2025-12-20 11:10:24] -rw------- 1 boinc boinc 984937824 Dec 20 11:09 shared/HITS.pool.root.1
[2025-12-20 11:10:24]  *** Contents of shared directory: ***
[2025-12-20 11:10:24] total 1374060
[2025-12-20 11:10:24] -rw-r--r-- 2 boinc boinc 414829071 Dec 20 00:34 ATLAS.root_0
[2025-12-20 11:10:24] -rw-r--r-- 2 boinc boinc    592589 Dec 20 00:34 input.tar.gz
[2025-12-20 11:10:24] -rw-r--r-- 2 boinc boinc     15847 Dec 20 00:34 start_atlas.sh
[2025-12-20 11:10:24] -rw------- 1 boinc boinc 984937824 Dec 20 11:09 HITS.pool.root.1
[2025-12-20 11:10:24] -rw------- 1 boinc boinc   6645760 Dec 20 11:10 result.tar.gz
11:10:26 (618208): run_atlas exited; CPU time 112836.470741
11:10:26 (618208): called boinc_finish(0)

</stderr_txt>
]]>

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