Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:43:21 (562925): wrapper (7.7.26015): starting
21:43:21 (562925): wrapper: running run_atlas (--nthreads 3)
[2025-12-19 21:43:21] Arguments: --nthreads 3
[2025-12-19 21:43:21] Threads: 3
[2025-12-19 21:43:21] Checking for CVMFS
[2025-12-19 21:43:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 21:43:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 21:43:21] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 21:43:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 21:43:22] 2.9.2.0 3111 1880 77436 154201 3 56 22824121 36864001 0 130560 0 1264841 99.990 68493 21304 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-19 21:43:22] CVMFS is ok
[2025-12-19 21:43:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-19 21:43:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-19 21:43:22] Further information can be found at the LHC@home message board.
[2025-12-19 21:43:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 21:43:22] Checking for apptainer binary...
[2025-12-19 21:43:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 21:43:22] Running /usr/bin/apptainer --version
[2025-12-19 21:43:22] apptainer version 1.4.1-1.1
[2025-12-19 21:43:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 21:43:22] legendA163
[2025-12-19 21:43:22] apptainer works
[2025-12-19 21:43:22] Set ATHENA_PROC_NUMBER=3
[2025-12-19 21:43:22] Set ATHENA_CORE_NUMBER=3
[2025-12-19 21:43:22] Starting ATLAS job with PandaID=6935102240
[2025-12-19 21:43:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 23:09:40]  *** The last 200 lines of the pilot log: ***
[2025-12-19 23:09:40]  mtime=0
[2025-12-19 23:09:40]  protocol_id=None
[2025-12-19 23:09:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-19 23:09:40]  replicas=None
[2025-12-19 23:09:40]  scope=mc23_13p6TeV
[2025-12-19 23:09:40]  status=None
[2025-12-19 23:09:40]  status_code=0
[2025-12-19 23:09:40]  storage_token=
[2025-12-19 23:09:40]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6935102240/log.47929280._001328.job.log.tgz.1
[2025-12-19 23:09:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/8b/log.47929280._001328.job.log.tgz.1
[2025-12-19 23:09:40]  workdir=None
[2025-12-19 23:09:40] ]
[2025-12-19 23:09:40] 2025-12-19 22:08:27,626 | INFO     | transferring file log.47929280._001328.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6935102240/log.47929280._001328.job.log.tgz.1 to /local/data/boinc/
[2025-12-19 23:09:40] 2025-12-19 22:08:27,627 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6935102240/log.47929280._001328.job.log.tgz.1 /local/data/boinc/slots/0/log.47929280._0013
[2025-12-19 23:09:40] 2025-12-19 22:08:27,641 | INFO     | adding to output.list: log.47929280._001328.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/8b/log.47929280._001328.job.log.tg
[2025-12-19 23:09:40] 2025-12-19 22:08:27,641 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-19 23:09:40] 2025-12-19 22:08:27,641 | INFO     | summary of transferred files:
[2025-12-19 23:09:40] 2025-12-19 22:08:27,641 | INFO     |  -- lfn=log.47929280._001328.job.log.tgz.1, status_code=0, status=transferred
[2025-12-19 23:09:40] 2025-12-19 22:08:27,642 | INFO     | stage-out finished correctly
[2025-12-19 23:09:40] 2025-12-19 22:08:27,691 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-19 23:09:40] 2025-12-19 22:08:28,829 | INFO     | time since job start (5100s) is within the limit (174528.0s)
[2025-12-19 23:09:40] 2025-12-19 22:08:29,196 | INFO     | job 6935102240 has state=finished
[2025-12-19 23:09:40] 2025-12-19 22:08:29,196 | INFO     | preparing for final server update for job 6935102240 in state='finished'
[2025-12-19 23:09:40] 2025-12-19 22:08:29,196 | INFO     | this job has now completed (state=finished)
[2025-12-19 23:09:40] 2025-12-19 22:08:29,196 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-19 23:09:40] 2025-12-19 22:08:29,197 | INFO     | log transfer has been attempted: DONE
[2025-12-19 23:09:40] 2025-12-19 22:08:29,197 | INFO     | job 6935102240 has finished - writing final server update
[2025-12-19 23:09:40] 2025-12-19 22:08:29,197 | INFO     | total number of processed events: 400 (read)
[2025-12-19 23:09:40] 2025-12-19 22:08:29,197 | INFO     | executing command: lscpu
[2025-12-19 23:09:40] 2025-12-19 22:08:29,213 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-19 23:09:40] 2025-12-19 22:08:29,638 | WARNING  | process 573115 can no longer be monitored (due to stat problems) - aborting
[2025-12-19 23:09:40] 2025-12-19 22:08:29,639 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6935102240/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 23:09:40] 2025-12-19 22:08:29,690 | INFO     | number of running child processes to parent process 573115: 1
[2025-12-19 23:09:40] 2025-12-19 22:08:29,690 | INFO     | maximum number of monitored processes: 6
[2025-12-19 23:09:40] 2025-12-19 22:08:30,835 | INFO     | time since job start (5102s) is within the limit (174528.0s)
[2025-12-19 23:09:40] 2025-12-19 22:08:32,193 | INFO     | monitor loop #392: job 0:6935102240 is in state 'finished'
[2025-12-19 23:09:40] 2025-12-19 22:08:32,193 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 23:09:40] 2025-12-19 22:08:32,841 | INFO     | time since job start (5104s) is within the limit (174528.0s)
[2025-12-19 23:09:40] 2025-12-19 22:08:33,705 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-19 23:09:40] 2025-12-19 22:08:33,706 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3659.4197499999996
[2025-12-19 23:09:40] 2025-12-19 22:08:33,707 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6935102240/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 23:09:40] 2025-12-19 22:08:33,707 | INFO     | extracted standard info from prmon json
[2025-12-19 23:09:40] 2025-12-19 22:08:33,707 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 23:09:40] 2025-12-19 22:08:33,707 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 23:09:40] 2025-12-19 22:08:33,707 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 23:09:40] 2025-12-19 22:08:33,707 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 23:09:40] 2025-12-19 22:08:33,708 | INFO     | fitting pss+swap vs Time
[2025-12-19 23:09:40] 2025-12-19 22:08:33,708 | INFO     | sum of square deviations: 141539398.0
[2025-12-19 23:09:40] 2025-12-19 22:08:33,708 | INFO     | sum of deviations: -13903202228.0
[2025-12-19 23:09:40] 2025-12-19 22:08:33,708 | INFO     | mean x: 1766179651.0
[2025-12-19 23:09:40] 2025-12-19 22:08:33,708 | INFO     | mean y: 2475245.2207792206
[2025-12-19 23:09:40] 2025-12-19 22:08:33,708 | INFO     | intersect: 173491646499.37195
[2025-12-19 23:09:40] 2025-12-19 22:08:33,708 | INFO     | chi2: 0.10930642302123765
[2025-12-19 23:09:40] 2025-12-19 22:08:33,708 | INFO     | current memory leak: -98.23 B/s (using 77 data points, chi2=0.11)
[2025-12-19 23:09:40] 2025-12-19 22:08:33,709 | INFO     | could have reported an average CPU frequency of 3811 MHz (6 samples)
[2025-12-19 23:09:40] 2025-12-19 22:08:33,709 | INFO     | ..............................
[2025-12-19 23:09:40] 2025-12-19 22:08:33,709 | INFO     | . Timing measurements:
[2025-12-19 23:09:40] 2025-12-19 22:08:33,709 | INFO     | . get job = 0 s
[2025-12-19 23:09:40] 2025-12-19 22:08:33,709 | INFO     | . initial setup = 1 s
[2025-12-19 23:09:40] 2025-12-19 22:08:33,709 | INFO     | . payload setup = 3 s
[2025-12-19 23:09:40] 2025-12-19 22:08:33,709 | INFO     | . stage-in = 0 s
[2025-12-19 23:09:40] 2025-12-19 22:08:33,709 | INFO     | . payload execution = 5079 s
[2025-12-19 23:09:40] 2025-12-19 22:08:33,709 | INFO     | . stage-out = 0 s
[2025-12-19 23:09:40] 2025-12-19 22:08:33,709 | INFO     | . log creation = 0 s
[2025-12-19 23:09:40] 2025-12-19 22:08:33,709 | INFO     | ..............................
[2025-12-19 23:09:40] 2025-12-19 22:08:33,740 | INFO     | 
[2025-12-19 23:09:40] 2025-12-19 22:08:33,740 | INFO     | job summary report
[2025-12-19 23:09:40] 2025-12-19 22:08:33,740 | INFO     | --------------------------------------------------
[2025-12-19 23:09:40] 2025-12-19 22:08:33,740 | INFO     | PanDA job id: 6935102240
[2025-12-19 23:09:40] 2025-12-19 22:08:33,740 | INFO     | task id: 47929280
[2025-12-19 23:09:40] 2025-12-19 22:08:33,740 | INFO     | errors: (none)
[2025-12-19 23:09:40] 2025-12-19 22:08:33,740 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 23:09:40] 2025-12-19 22:08:33,740 | INFO     | pilot state: finished 
[2025-12-19 23:09:40] 2025-12-19 22:08:33,740 | INFO     | transexitcode: 0
[2025-12-19 23:09:40] 2025-12-19 22:08:33,740 | INFO     | exeerrorcode: 0
[2025-12-19 23:09:40] 2025-12-19 22:08:33,740 | INFO     | exeerrordiag: 
[2025-12-19 23:09:40] 2025-12-19 22:08:33,740 | INFO     | exitcode: 0
[2025-12-19 23:09:40] 2025-12-19 22:08:33,740 | INFO     | exitmsg: OK
[2025-12-19 23:09:40] 2025-12-19 22:08:33,741 | INFO     | cpuconsumptiontime: 14592 s
[2025-12-19 23:09:40] 2025-12-19 22:08:33,741 | INFO     | nevents: 400
[2025-12-19 23:09:40] 2025-12-19 22:08:33,741 | INFO     | neventsw: 0
[2025-12-19 23:09:40] 2025-12-19 22:08:33,741 | INFO     | pid: 573115
[2025-12-19 23:09:40] 2025-12-19 22:08:33,741 | INFO     | pgrp: 573115
[2025-12-19 23:09:40] 2025-12-19 22:08:33,741 | INFO     | corecount: 3
[2025-12-19 23:09:40] 2025-12-19 22:08:33,741 | INFO     | event service: False
[2025-12-19 23:09:40] 2025-12-19 22:08:33,741 | INFO     | sizes: {0: 2284034, 3: 2284296, 11: 2284324, 5085: 2319815, 5086: 2319815, 5092: 2320009}
[2025-12-19 23:09:40] 2025-12-19 22:08:33,741 | INFO     | --------------------------------------------------
[2025-12-19 23:09:40] 2025-12-19 22:08:33,741 | INFO     | 
[2025-12-19 23:09:40] 2025-12-19 22:08:33,741 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-19 23:09:40] 2025-12-19 22:08:33,754 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 23:09:40] 2025-12-19 22:08:33,754 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 23:09:40] 2025-12-19 22:08:33,754 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 23:09:40] 2025-12-19 22:08:33,754 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 23:09:40] 2025-12-19 22:08:33,755 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 23:09:40] 2025-12-19 22:08:33,755 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 23:09:40] 2025-12-19 22:08:33,755 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 23:09:40] 2025-12-19 22:08:33,755 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 23:09:40] 2025-12-19 22:08:33,755 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 23:09:40] 2025-12-19 22:08:33,755 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 23:09:40] 2025-12-19 22:08:33,755 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 23:09:40] 2025-12-19 22:08:33,755 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 23:09:40] 2025-12-19 22:08:33,755 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 23:09:40] 2025-12-19 22:08:33,755 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 23:09:40] 2025-12-19 22:08:33,755 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 23:09:40] 2025-12-19 22:08:33,755 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 23:09:40] 2025-12-19 22:08:33,755 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 23:09:40] 2025-12-19 22:08:33,755 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 23:09:40] 2025-12-19 22:08:33,755 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 23:09:40] 2025-12-19 22:08:33,755 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 23:09:40] 2025-12-19 22:08:33,755 | INFO     | job 6935102240 has completed (purged errors)
[2025-12-19 23:09:40] 2025-12-19 22:08:33,755 | INFO     | overall cleanup function is called
[2025-12-19 23:09:40] 2025-12-19 22:08:34,762 | INFO     | --- collectZombieJob: --- 10, [573115]
[2025-12-19 23:09:40] 2025-12-19 22:08:34,762 | INFO     | zombie collector waiting for pid 573115
[2025-12-19 23:09:40] 2025-12-19 22:08:34,762 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 23:09:40] 2025-12-19 22:08:34,762 | INFO     | collected zombie processes
[2025-12-19 23:09:40] 2025-12-19 22:08:34,762 | INFO     | will attempt to kill all subprocesses of pid=573115
[2025-12-19 23:09:40] 2025-12-19 22:08:34,818 | INFO     | process IDs to be killed: [573115] (in reverse order)
[2025-12-19 23:09:40] 2025-12-19 22:08:34,847 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 23:09:40] 2025-12-19 22:08:34,847 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 23:09:40] 2025-12-19 22:08:34,849 | INFO     | did not find any defunct processes belonging to 573115
[2025-12-19 23:09:40] 2025-12-19 22:08:34,850 | INFO     | did not find any defunct processes belonging to 573115
[2025-12-19 23:09:40] 2025-12-19 22:08:34,850 | INFO     | ready for new job
[2025-12-19 23:09:40] 2025-12-19 22:08:34,850 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 23:09:40] 2025-12-19 22:08:34,851 | INFO     | ***************************************
[2025-12-19 23:09:40] 2025-12-19 22:08:34,851 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 23:09:40] 2025-12-19 22:08:34,851 | INFO     | ***************************************
[2025-12-19 23:09:40] 2025-12-19 22:08:34,851 | INFO     | 
[2025-12-19 23:09:40] 2025-12-19 22:08:34,851 | INFO     | architecture information:
[2025-12-19 23:09:40] 2025-12-19 22:08:34,851 | INFO     | executing command: cat /etc/os-release
[2025-12-19 23:09:40] 2025-12-19 22:08:34,860 | INFO     | cat /etc/os-release:
[2025-12-19 23:09:40] NAME="CentOS Linux"
[2025-12-19 23:09:40] VERSION="7 (Core)"
[2025-12-19 23:09:40] ID="centos"
[2025-12-19 23:09:40] ID_LIKE="rhel fedora"
[2025-12-19 23:09:40] VERSION_ID="7"
[2025-12-19 23:09:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 23:09:40] ANSI_COLOR="0;31"
[2025-12-19 23:09:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 23:09:40] HOME_URL="https://www.centos.org/"
[2025-12-19 23:09:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 23:09:40] 
[2025-12-19 23:09:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 23:09:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 23:09:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 23:09:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 23:09:40] 
[2025-12-19 23:09:40] 2025-12-19 22:08:34,860 | INFO     | ***************************************
[2025-12-19 23:09:40] 2025-12-19 22:08:35,362 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-19 23:09:40] 2025-12-19 22:08:35,376 | INFO     | sufficient remaining disk space (382101094400 B)
[2025-12-19 23:09:40] 2025-12-19 22:08:35,376 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 23:09:40] 2025-12-19 22:08:35,376 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 23:09:40] 2025-12-19 22:08:35,376 | INFO     | update_server=False
[2025-12-19 23:09:40] 2025-12-19 22:08:35,376 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 23:09:40] 2025-12-19 22:08:35,376 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 23:09:40] 2025-12-19 22:08:35,514 | INFO     | all payload control threads have been joined
[2025-12-19 23:09:40] 2025-12-19 22:08:35,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 23:09:40] 2025-12-19 22:08:35,702 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 23:09:40] 2025-12-19 22:08:35,702 | INFO     | aborting loop
[2025-12-19 23:09:40] 2025-12-19 22:08:36,071 | INFO     | all data control threads have been joined
[2025-12-19 23:09:40] 2025-12-19 22:08:36,379 | INFO     | [job] retrieve thread has finished
[2025-12-19 23:09:40] 2025-12-19 22:08:36,381 | INFO     | [job] queue monitor thread has finished
[2025-12-19 23:09:40] 2025-12-19 22:08:36,401 | INFO     | [payload] validate_post thread has finished
[2025-12-19 23:09:40] 2025-12-19 22:08:36,434 | INFO     | [payload] failed_post thread has finished
[2025-12-19 23:09:40] 2025-12-19 22:08:36,520 | INFO     | [payload] control thread has finished
[2025-12-19 23:09:40] 2025-12-19 22:08:36,603 | INFO     | [data] copytool_in thread has finished
[2025-12-19 23:09:40] 2025-12-19 22:08:36,670 | INFO     | all job control threads have been joined
[2025-12-19 23:09:40] 2025-12-19 22:08:36,708 | INFO     | [job] job monitor thread has finished
[2025-12-19 23:09:40] 2025-12-19 22:08:36,805 | INFO     | [job] validate thread has finished
[2025-12-19 23:09:40] 2025-12-19 22:08:36,883 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 23:09:40] 2025-12-19 22:08:36,985 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 23:09:40] 2025-12-19 22:08:37,076 | INFO     | [data] control thread has finished
[2025-12-19 23:09:40] 2025-12-19 22:08:37,373 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 23:09:40] 2025-12-19 22:08:37,676 | INFO     | [job] control thread has finished
[2025-12-19 23:09:40] 2025-12-19 22:08:37,689 | INFO     | [data] copytool_out thread has finished
[2025-12-19 23:09:40] 2025-12-19 22:08:38,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 23:09:40] 2025-12-19 22:08:42,244 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 23:09:40] 2025-12-19 22:08:45,843 | INFO     | job.realtimelogging is not enabled
[2025-12-19 23:09:40] 2025-12-19 22:08:46,849 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 23:09:40] 2025-12-19 22:09:05,998 | INFO     | PID=566655 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-19 23:09:40] 2025-12-19 22:09:05,998 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 23:09:40] 2025-12-19 22:09:05,998 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 23:09:40] 2025-12-19 22:09:05,998 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 23:09:40] 2025-12-19 22:09:33,795 | INFO     | [monitor] cgroup control has ended
[2025-12-19 23:09:40] 2025-12-19 22:09:35,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139810879874880)>', '<ExcThread(monitor, started 139810043852544)>']
[2025-12-19 23:09:40] 2025-12-19 22:09:36,148 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 23:09:40] 2025-12-19 22:09:36,149 | INFO     | [monitor] control thread has ended
[2025-12-19 23:09:40] 2025-12-19 22:09:40,346 | INFO     | all workflow threads have been joined
[2025-12-19 23:09:40] 2025-12-19 22:09:40,346 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 23:09:40] 2025-12-19 22:09:40,346 | INFO     | traces error code: 0
[2025-12-19 23:09:40] 2025-12-19 22:09:40,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 23:09:40] 2025-12-19 22:09:40,398 [wrapper] ==== pilot stdout END ====
[2025-12-19 23:09:40] 2025-12-19 22:09:40,401 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 23:09:40] 2025-12-19 22:09:40,403 [wrapper] pilotpid: 566655
[2025-12-19 23:09:40] 2025-12-19 22:09:40,406 [wrapper] Pilot exit status: 0
[2025-12-19 23:09:40] 2025-12-19 22:09:40,414 [wrapper] pandaids: 6935102240
[2025-12-19 23:09:40] 2025-12-19 22:09:40,435 [wrapper] cleanup supervisor_pilot  587320 566656
[2025-12-19 23:09:40] 2025-12-19 22:09:40,437 [wrapper] Test setup, not cleaning
[2025-12-19 23:09:40] 2025-12-19 22:09:40,440 [wrapper] apfmon messages muted
[2025-12-19 23:09:40] 2025-12-19 22:09:40,442 [wrapper] ==== wrapper stdout END ====
[2025-12-19 23:09:40] 2025-12-19 22:09:40,445 [wrapper] ==== wrapper stderr END ====
[2025-12-19 23:09:40]  *** Error codes and diagnostics ***
[2025-12-19 23:09:40]     "exeErrorCode": 0,
[2025-12-19 23:09:40]     "exeErrorDiag": "",
[2025-12-19 23:09:40]     "pilotErrorCode": 0,
[2025-12-19 23:09:40]     "pilotErrorDiag": "",
[2025-12-19 23:09:40]  *** Listing of results directory ***
[2025-12-19 23:09:40] total 432832
[2025-12-19 23:09:40] -rwx------ 1 boinc boinc     36322 Dec 19 06:09 runpilot2-wrapper.sh
[2025-12-19 23:09:40] -rw-r--r-- 1 boinc boinc    579449 Dec 19 06:13 pilot3.tar.gz
[2025-12-19 23:09:40] -rw-r--r-- 1 boinc boinc      5112 Dec 19 06:13 queuedata.json
[2025-12-19 23:09:40] -rw-r--r-- 1 boinc boinc       100 Dec 19 21:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 23:09:40] -rwxr-xr-x 1 boinc boinc      7986 Dec 19 21:43 run_atlas
[2025-12-19 23:09:40] -rw-r--r-- 1 boinc boinc       105 Dec 19 21:43 job.xml
[2025-12-19 23:09:40] -rw-r--r-- 2 boinc boinc 251748669 Dec 19 21:43 EVNT.47929278._000045.pool.root.1
[2025-12-19 23:09:40] -rw-r--r-- 2 boinc boinc    592408 Dec 19 21:43 input.tar.gz
[2025-12-19 23:09:40] -rw-r--r-- 2 boinc boinc     15847 Dec 19 21:43 start_atlas.sh
[2025-12-19 23:09:40] drwxrwx--x 2 boinc boinc      4096 Dec 19 21:43 shared
[2025-12-19 23:09:40] -rw-r--r-- 1 boinc boinc         0 Dec 19 21:43 boinc_setup_complete
[2025-12-19 23:09:40] -rw-r--r-- 1 boinc boinc      6449 Dec 19 21:43 init_data.xml
[2025-12-19 23:09:40] -rw-r--r-- 1 boinc boinc         0 Dec 19 21:43 boinc_lockfile
[2025-12-19 23:09:40] -rw-r--r-- 1 boinc boinc      2565 Dec 19 21:43 pandaJob.out
[2025-12-19 23:09:40] -rw------- 1 boinc boinc    988154 Dec 19 21:43 agis_schedconf.cvmfs.json
[2025-12-19 23:09:40] -rw------- 1 boinc boinc   1516240 Dec 19 21:43 agis_ddmendpoints.agis.ALL.json
[2025-12-19 23:09:40] drwx------ 5 boinc boinc      4096 Dec 19 21:43 pilot3
[2025-12-19 23:09:40] -rw------- 1 boinc boinc 185584942 Dec 19 23:08 HITS.47929280._001328.pool.root.1
[2025-12-19 23:09:40] -rw-r--r-- 1 boinc boinc       529 Dec 19 23:08 boinc_task_state.xml
[2025-12-19 23:09:40] -rw------- 1 boinc boinc      1013 Dec 19 23:08 memory_monitor_summary.json
[2025-12-19 23:09:40] -rw------- 1 boinc boinc    240737 Dec 19 23:08 log.47929280._001328.job.log.tgz.1
[2025-12-19 23:09:40] -rw------- 1 boinc boinc      7750 Dec 19 23:08 heartbeat.json
[2025-12-19 23:09:40] -rw------- 1 boinc boinc        95 Dec 19 23:09 pilot_heartbeat.json
[2025-12-19 23:09:40] -rw-r--r-- 1 boinc boinc      8192 Dec 19 23:09 boinc_mmap_file
[2025-12-19 23:09:40] -rw-r--r-- 1 boinc boinc        27 Dec 19 23:09 wrapper_checkpoint.txt
[2025-12-19 23:09:40] -rw------- 1 boinc boinc      4823 Dec 19 23:09 pilotlog.txt
[2025-12-19 23:09:40] -rw------- 1 boinc boinc    745891 Dec 19 23:09 log.47929280._001328.job.log.1
[2025-12-19 23:09:40] -rw------- 1 boinc boinc       357 Dec 19 23:09 output.list
[2025-12-19 23:09:40] -rw-r--r-- 1 boinc boinc       620 Dec 19 23:09 runtime_log
[2025-12-19 23:09:40] -rw------- 1 boinc boinc   1003520 Dec 19 23:09 result.tar.gz
[2025-12-19 23:09:40] -rw-r--r-- 1 boinc boinc      8917 Dec 19 23:09 runtime_log.err
[2025-12-19 23:09:40] -rw------- 1 boinc boinc       662 Dec 19 23:09 8jILDmRvhq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAlaKDms1tnGn.diag
[2025-12-19 23:09:40] -rw-r--r-- 1 boinc boinc     21727 Dec 19 23:09 stderr.txt
[2025-12-19 23:09:40] HITS file was successfully produced:
[2025-12-19 23:09:40] -rw------- 1 boinc boinc 185584942 Dec 19 23:08 shared/HITS.pool.root.1
[2025-12-19 23:09:40]  *** Contents of shared directory: ***
[2025-12-19 23:09:40] total 428672
[2025-12-19 23:09:40] -rw-r--r-- 2 boinc boinc 251748669 Dec 19 21:43 ATLAS.root_0
[2025-12-19 23:09:40] -rw-r--r-- 2 boinc boinc    592408 Dec 19 21:43 input.tar.gz
[2025-12-19 23:09:40] -rw-r--r-- 2 boinc boinc     15847 Dec 19 21:43 start_atlas.sh
[2025-12-19 23:09:40] -rw------- 1 boinc boinc 185584942 Dec 19 23:08 HITS.pool.root.1
[2025-12-19 23:09:40] -rw------- 1 boinc boinc   1003520 Dec 19 23:09 result.tar.gz
23:09:41 (562925): run_atlas exited; CPU time 14619.864991
23:09:41 (562925): called boinc_finish(0)

</stderr_txt>
]]>

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