Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:00:50 (1202606): wrapper (7.7.26015): starting
21:00:50 (1202606): wrapper: running run_atlas (--nthreads 2)
[2025-12-20 21:00:50] Arguments: --nthreads 2
[2025-12-20 21:00:50] Threads: 2
[2025-12-20 21:00:50] Checking for CVMFS
[2025-12-20 21:00:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-20 21:00:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-20 21:00:50] Running cvmfs_config stat atlas.cern.ch
[2025-12-20 21:00:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-20 21:00:50] 2.9.2.0 3291537 10884 66752 154236 2 57 35343930 36864000 0 130560 0 5421195 99.987 391606 6911 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-20 21:00:50] CVMFS is ok
[2025-12-20 21:00:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-20 21:00:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-20 21:00:50] Further information can be found at the LHC@home message board.
[2025-12-20 21:00:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-20 21:00:50] Checking for apptainer binary...
[2025-12-20 21:00:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-20 21:00:50] Running /usr/bin/apptainer --version
[2025-12-20 21:00:50] apptainer version 1.4.1-1.1
[2025-12-20 21:00:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-20 21:00:50] thA354
[2025-12-20 21:00:50] apptainer works
[2025-12-20 21:00:50] Set ATHENA_PROC_NUMBER=2
[2025-12-20 21:00:50] Set ATHENA_CORE_NUMBER=2
[2025-12-20 21:00:50] Starting ATLAS job with PandaID=6935102210
[2025-12-20 21:00:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-20 23:06:21]  *** The last 200 lines of the pilot log: ***
[2025-12-20 23:06:21] 2025-12-20 22:05:23,191 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-20 23:06:21] 2025-12-20 22:05:23,192 | INFO     | fitting pss+swap vs Time
[2025-12-20 23:06:21] 2025-12-20 22:05:23,192 | INFO     | sum of square deviations: 563026370.5
[2025-12-20 23:06:21] 2025-12-20 22:05:23,192 | INFO     | sum of deviations: 2833031570.5000033
[2025-12-20 23:06:21] 2025-12-20 22:05:23,192 | INFO     | mean x: 1766264583.5
[2025-12-20 23:06:21] 2025-12-20 22:05:23,193 | INFO     | mean y: 2301684.844262295
[2025-12-20 23:06:21] 2025-12-20 22:05:23,193 | INFO     | intersect: -8885174264.937273
[2025-12-20 23:06:21] 2025-12-20 22:05:23,193 | INFO     | chi2: 1.5847379483638246
[2025-12-20 23:06:21] 2025-12-20 22:05:23,193 | INFO     | sum of square deviations: 496597218.0
[2025-12-20 23:06:21] 2025-12-20 22:05:23,193 | INFO     | sum of deviations: 2779048308.999999
[2025-12-20 23:06:21] 2025-12-20 22:05:23,193 | INFO     | mean x: 1766264431.0
[2025-12-20 23:06:21] 2025-12-20 22:05:23,193 | INFO     | mean y: 2301560.8803418805
[2025-12-20 23:06:21] 2025-12-20 22:05:23,193 | INFO     | intersect: -9882035286.567312
[2025-12-20 23:06:21] 2025-12-20 22:05:23,193 | INFO     | chi2: 1.5862569182733217
[2025-12-20 23:06:21] 2025-12-20 22:05:23,193 | INFO     | current chi2=1.5862569182733217 (change=-0.09584991077328227 %)
[2025-12-20 23:06:21] 2025-12-20 22:05:23,193 | INFO     | right removable region: 116
[2025-12-20 23:06:21] 2025-12-20 22:05:23,193 | INFO     | sum of square deviations: 496597218.0
[2025-12-20 23:06:21] 2025-12-20 22:05:23,194 | INFO     | sum of deviations: -10429237831.999998
[2025-12-20 23:06:21] 2025-12-20 22:05:23,194 | INFO     | mean x: 1766264736.0
[2025-12-20 23:06:21] 2025-12-20 22:05:23,194 | INFO     | mean y: 2331252.905982906
[2025-12-20 23:06:21] 2025-12-20 22:05:23,194 | INFO     | intersect: 37096367099.918495
[2025-12-20 23:06:21] 2025-12-20 22:05:23,194 | INFO     | chi2: 0.1840487575851407
[2025-12-20 23:06:21] 2025-12-20 22:05:23,194 | INFO     | current chi2=0.1840487575851407 (change=88.38617086344381 %)
[2025-12-20 23:06:21] 2025-12-20 22:05:23,194 | INFO     | sum of square deviations: 435610028.0
[2025-12-20 23:06:21] 2025-12-20 22:05:23,194 | INFO     | sum of deviations: -4132072625.499999
[2025-12-20 23:06:21] 2025-12-20 22:05:23,194 | INFO     | mean x: 1766264888.5
[2025-12-20 23:06:21] 2025-12-20 22:05:23,194 | INFO     | mean y: 2315491.026785714
[2025-12-20 23:06:21] 2025-12-20 22:05:23,195 | INFO     | intersect: 16756601035.510756
[2025-12-20 23:06:21] 2025-12-20 22:05:23,195 | INFO     | chi2: 0.10547077473551157
[2025-12-20 23:06:21] 2025-12-20 22:05:23,195 | INFO     | current chi2=0.10547077473551157 (change=42.694112082380705 %)
[2025-12-20 23:06:21] 2025-12-20 22:05:23,195 | INFO     | sum of square deviations: 379832238.0
[2025-12-20 23:06:21] 2025-12-20 22:05:23,195 | INFO     | sum of deviations: 911282904.0
[2025-12-20 23:06:21] 2025-12-20 22:05:23,195 | INFO     | mean x: 1766265041.0
[2025-12-20 23:06:21] 2025-12-20 22:05:23,195 | INFO     | mean y: 2301841.6261682245
[2025-12-20 23:06:21] 2025-12-20 22:05:23,195 | INFO     | intersect: -4235271946.9266586
[2025-12-20 23:06:21] 2025-12-20 22:05:23,195 | INFO     | chi2: 0.0016396546103870791
[2025-12-20 23:06:21] 2025-12-20 22:05:23,195 | INFO     | current chi2=0.0016396546103870791 (change=98.4453943620886 %)
[2025-12-20 23:06:21] 2025-12-20 22:05:23,195 | INFO     | sum of square deviations: 329031285.5
[2025-12-20 23:06:21] 2025-12-20 22:05:23,196 | INFO     | sum of deviations: 570209608.5000001
[2025-12-20 23:06:21] 2025-12-20 22:05:23,196 | INFO     | mean x: 1766265193.5
[2025-12-20 23:06:21] 2025-12-20 22:05:23,196 | INFO     | mean y: 2302864.2647058824
[2025-12-20 23:06:21] 2025-12-20 22:05:23,196 | INFO     | intersect: -3058626077.3778725
[2025-12-20 23:06:21] 2025-12-20 22:05:23,196 | INFO     | chi2: 0.0014295155014067546
[2025-12-20 23:06:21] 2025-12-20 22:05:23,196 | INFO     | current chi2=0.0014295155014067546 (change=12.816059409653127 %)
[2025-12-20 23:06:21] 2025-12-20 22:05:23,196 | INFO     | left removable region: 40
[2025-12-20 23:06:21] 2025-12-20 22:05:23,196 | INFO     | sum of square deviations: 136095575.0
[2025-12-20 23:06:21] 2025-12-20 22:05:23,196 | INFO     | sum of deviations: -216455144.99999994
[2025-12-20 23:06:21] 2025-12-20 22:05:23,196 | INFO     | mean x: 1766265620.5
[2025-12-20 23:06:21] 2025-12-20 22:05:23,196 | INFO     | mean y: 2305925.263157895
[2025-12-20 23:06:21] 2025-12-20 22:05:23,196 | INFO     | intersect: 2811488229.6389055
[2025-12-20 23:06:21] 2025-12-20 22:05:23,196 | INFO     | chi2: 0.0006071381231815893
[2025-12-20 23:06:21] 2025-12-20 22:05:23,197 | INFO     | current memory leak: -1.59 B/s (using 76 data points, chi2=0.00)
[2025-12-20 23:06:21] 2025-12-20 22:05:23,197 | INFO     | could have reported an average CPU frequency of 4337 MHz (8 samples)
[2025-12-20 23:06:21] 2025-12-20 22:05:23,197 | INFO     | ..............................
[2025-12-20 23:06:21] 2025-12-20 22:05:23,197 | INFO     | . Timing measurements:
[2025-12-20 23:06:21] 2025-12-20 22:05:23,197 | INFO     | . get job = 0 s
[2025-12-20 23:06:21] 2025-12-20 22:05:23,197 | INFO     | . initial setup = 1 s
[2025-12-20 23:06:21] 2025-12-20 22:05:23,197 | INFO     | . payload setup = 7 s
[2025-12-20 23:06:21] 2025-12-20 22:05:23,197 | INFO     | . stage-in = 0 s
[2025-12-20 23:06:21] 2025-12-20 22:05:23,197 | INFO     | . payload execution = 7417 s
[2025-12-20 23:06:21] 2025-12-20 22:05:23,197 | INFO     | . stage-out = 0 s
[2025-12-20 23:06:21] 2025-12-20 22:05:23,197 | INFO     | . log creation = 0 s
[2025-12-20 23:06:21] 2025-12-20 22:05:23,197 | INFO     | ..............................
[2025-12-20 23:06:21] 2025-12-20 22:05:23,678 | INFO     | 
[2025-12-20 23:06:21] 2025-12-20 22:05:23,678 | INFO     | job summary report
[2025-12-20 23:06:21] 2025-12-20 22:05:23,679 | INFO     | --------------------------------------------------
[2025-12-20 23:06:21] 2025-12-20 22:05:23,679 | INFO     | PanDA job id: 6935102210
[2025-12-20 23:06:21] 2025-12-20 22:05:23,679 | INFO     | task id: 47929280
[2025-12-20 23:06:21] 2025-12-20 22:05:23,679 | INFO     | errors: (none)
[2025-12-20 23:06:21] 2025-12-20 22:05:23,679 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-20 23:06:21] 2025-12-20 22:05:23,679 | INFO     | pilot state: finished 
[2025-12-20 23:06:21] 2025-12-20 22:05:23,680 | INFO     | transexitcode: 0
[2025-12-20 23:06:21] 2025-12-20 22:05:23,680 | INFO     | exeerrorcode: 0
[2025-12-20 23:06:21] 2025-12-20 22:05:23,680 | INFO     | exeerrordiag: 
[2025-12-20 23:06:21] 2025-12-20 22:05:23,680 | INFO     | exitcode: 0
[2025-12-20 23:06:21] 2025-12-20 22:05:23,680 | INFO     | exitmsg: OK
[2025-12-20 23:06:21] 2025-12-20 22:05:23,680 | INFO     | cpuconsumptiontime: 14469 s
[2025-12-20 23:06:21] 2025-12-20 22:05:23,681 | INFO     | nevents: 400
[2025-12-20 23:06:21] 2025-12-20 22:05:23,681 | INFO     | neventsw: 0
[2025-12-20 23:06:21] 2025-12-20 22:05:23,681 | INFO     | pid: 1212746
[2025-12-20 23:06:21] 2025-12-20 22:05:23,681 | INFO     | pgrp: 1212746
[2025-12-20 23:06:21] 2025-12-20 22:05:23,681 | INFO     | corecount: 2
[2025-12-20 23:06:21] 2025-12-20 22:05:23,681 | INFO     | event service: False
[2025-12-20 23:06:21] 2025-12-20 22:05:23,681 | INFO     | sizes: {0: 2284036, 7: 2284298, 11: 2284326, 7428: 2321009, 7431: 2321009, 7440: 2321203}
[2025-12-20 23:06:21] 2025-12-20 22:05:23,682 | INFO     | --------------------------------------------------
[2025-12-20 23:06:21] 2025-12-20 22:05:23,682 | INFO     | 
[2025-12-20 23:06:21] 2025-12-20 22:05:23,682 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-20 23:06:21] 2025-12-20 22:05:23,694 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-20 23:06:21] 2025-12-20 22:05:23,694 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-20 23:06:21] 2025-12-20 22:05:23,694 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-20 23:06:21] 2025-12-20 22:05:23,694 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-20 23:06:21] 2025-12-20 22:05:23,694 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-20 23:06:21] 2025-12-20 22:05:23,694 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-20 23:06:21] 2025-12-20 22:05:23,694 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-20 23:06:21] 2025-12-20 22:05:23,694 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-20 23:06:21] 2025-12-20 22:05:23,694 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-20 23:06:21] 2025-12-20 22:05:23,694 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-20 23:06:21] 2025-12-20 22:05:23,695 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-20 23:06:21] 2025-12-20 22:05:23,695 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-20 23:06:21] 2025-12-20 22:05:23,695 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-20 23:06:21] 2025-12-20 22:05:23,695 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-20 23:06:21] 2025-12-20 22:05:23,695 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-20 23:06:21] 2025-12-20 22:05:23,695 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-20 23:06:21] 2025-12-20 22:05:23,695 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-20 23:06:21] 2025-12-20 22:05:23,695 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-20 23:06:21] 2025-12-20 22:05:23,695 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-20 23:06:21] 2025-12-20 22:05:23,695 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-20 23:06:21] 2025-12-20 22:05:23,695 | INFO     | job 6935102210 has completed (purged errors)
[2025-12-20 23:06:21] 2025-12-20 22:05:23,695 | INFO     | overall cleanup function is called
[2025-12-20 23:06:21] 2025-12-20 22:05:24,701 | INFO     | --- collectZombieJob: --- 10, [1212746]
[2025-12-20 23:06:21] 2025-12-20 22:05:24,701 | INFO     | zombie collector waiting for pid 1212746
[2025-12-20 23:06:21] 2025-12-20 22:05:24,701 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-20 23:06:21] 2025-12-20 22:05:24,702 | INFO     | collected zombie processes
[2025-12-20 23:06:21] 2025-12-20 22:05:24,702 | INFO     | will attempt to kill all subprocesses of pid=1212746
[2025-12-20 23:06:21] 2025-12-20 22:05:24,738 | INFO     | process IDs to be killed: [1212746] (in reverse order)
[2025-12-20 23:06:21] 2025-12-20 22:05:24,759 | WARNING  | found no corresponding commands to process id(s)
[2025-12-20 23:06:21] 2025-12-20 22:05:24,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-20 23:06:21] 2025-12-20 22:05:24,760 | INFO     | did not find any defunct processes belonging to 1212746
[2025-12-20 23:06:21] 2025-12-20 22:05:24,761 | INFO     | did not find any defunct processes belonging to 1212746
[2025-12-20 23:06:21] 2025-12-20 22:05:24,761 | INFO     | ready for new job
[2025-12-20 23:06:21] 2025-12-20 22:05:24,761 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-20 23:06:21] 2025-12-20 22:05:24,761 | INFO     | ***************************************
[2025-12-20 23:06:21] 2025-12-20 22:05:24,761 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-20 23:06:21] 2025-12-20 22:05:24,761 | INFO     | ***************************************
[2025-12-20 23:06:21] 2025-12-20 22:05:24,761 | INFO     | 
[2025-12-20 23:06:21] 2025-12-20 22:05:24,762 | INFO     | architecture information:
[2025-12-20 23:06:21] 2025-12-20 22:05:24,762 | INFO     | executing command: cat /etc/os-release
[2025-12-20 23:06:21] 2025-12-20 22:05:24,769 | INFO     | cat /etc/os-release:
[2025-12-20 23:06:21] NAME="CentOS Linux"
[2025-12-20 23:06:21] VERSION="7 (Core)"
[2025-12-20 23:06:21] ID="centos"
[2025-12-20 23:06:21] ID_LIKE="rhel fedora"
[2025-12-20 23:06:21] VERSION_ID="7"
[2025-12-20 23:06:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-20 23:06:21] ANSI_COLOR="0;31"
[2025-12-20 23:06:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-20 23:06:21] HOME_URL="https://www.centos.org/"
[2025-12-20 23:06:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-20 23:06:21] 
[2025-12-20 23:06:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-20 23:06:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-20 23:06:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-20 23:06:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-20 23:06:21] 
[2025-12-20 23:06:21] 2025-12-20 22:05:24,770 | INFO     | ***************************************
[2025-12-20 23:06:21] 2025-12-20 22:05:25,272 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-20 23:06:21] 2025-12-20 22:05:25,285 | INFO     | sufficient remaining disk space (487704231936 B)
[2025-12-20 23:06:21] 2025-12-20 22:05:25,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-20 23:06:21] 2025-12-20 22:05:25,285 | INFO     | current server update state: UPDATING_FINAL
[2025-12-20 23:06:21] 2025-12-20 22:05:25,285 | INFO     | update_server=False
[2025-12-20 23:06:21] 2025-12-20 22:05:25,285 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-20 23:06:21] 2025-12-20 22:05:25,285 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-20 23:06:21] 2025-12-20 22:05:25,441 | INFO     | all job control threads have been joined
[2025-12-20 23:06:21] 2025-12-20 22:05:25,529 | INFO     | all data control threads have been joined
[2025-12-20 23:06:21] 2025-12-20 22:05:25,690 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-20 23:06:21] 2025-12-20 22:05:25,691 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-20 23:06:21] 2025-12-20 22:05:25,691 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-20 23:06:21] 2025-12-20 22:05:25,715 | INFO     | will abort loop
[2025-12-20 23:06:21] 2025-12-20 22:05:26,291 | INFO     | [job] retrieve thread has finished
[2025-12-20 23:06:21] 2025-12-20 22:05:26,380 | INFO     | [job] create_data_payload thread has finished
[2025-12-20 23:06:21] 2025-12-20 22:05:26,381 | INFO     | [payload] validate_pre thread has finished
[2025-12-20 23:06:21] 2025-12-20 22:05:26,432 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-20 23:06:21] 2025-12-20 22:05:26,446 | INFO     | [job] control thread has finished
[2025-12-20 23:06:21] 2025-12-20 22:05:26,535 | INFO     | [data] control thread has finished
[2025-12-20 23:06:21] 2025-12-20 22:05:26,620 | INFO     | [payload] execute_payloads thread has finished
[2025-12-20 23:06:21] 2025-12-20 22:05:26,719 | INFO     | [job] job monitor thread has finished
[2025-12-20 23:06:21] 2025-12-20 22:05:26,784 | INFO     | all payload control threads have been joined
[2025-12-20 23:06:21] 2025-12-20 22:05:26,905 | INFO     | [payload] failed_post thread has finished
[2025-12-20 23:06:21] 2025-12-20 22:05:27,447 | INFO     | [data] copytool_in thread has finished
[2025-12-20 23:06:21] 2025-12-20 22:05:27,649 | INFO     | [payload] validate_post thread has finished
[2025-12-20 23:06:21] 2025-12-20 22:05:27,667 | INFO     | [job] validate thread has finished
[2025-12-20 23:06:21] 2025-12-20 22:05:27,790 | INFO     | [payload] control thread has finished
[2025-12-20 23:06:21] 2025-12-20 22:05:28,244 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-20 23:06:21] 2025-12-20 22:05:28,438 | INFO     | [data] copytool_out thread has finished
[2025-12-20 23:06:21] 2025-12-20 22:05:29,249 | INFO     | [job] queue monitor thread has finished
[2025-12-20 23:06:21] 2025-12-20 22:05:29,291 | INFO     | [data] queue_monitor thread has finished
[2025-12-20 23:06:21] 2025-12-20 22:05:35,678 | INFO     | job.realtimelogging is not enabled
[2025-12-20 23:06:21] 2025-12-20 22:05:36,684 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-20 23:06:21] 2025-12-20 22:05:55,505 | INFO     | PID=1206320 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-20 23:06:21] 2025-12-20 22:05:55,506 | INFO     | found 0 job(s) in 20 queues
[2025-12-20 23:06:21] 2025-12-20 22:05:55,506 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-20 23:06:21] 2025-12-20 22:05:55,506 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-20 23:06:21] 2025-12-20 22:06:15,213 | INFO     | [monitor] cgroup control has ended
[2025-12-20 23:06:21] 2025-12-20 22:06:16,261 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140492237793088)>', '<ExcThread(monitor, started 140491534366464)>']
[2025-12-20 23:06:21] 2025-12-20 22:06:16,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-20 23:06:21] 2025-12-20 22:06:16,604 | INFO     | [monitor] control thread has ended
[2025-12-20 23:06:21] 2025-12-20 22:06:21,273 | INFO     | all workflow threads have been joined
[2025-12-20 23:06:21] 2025-12-20 22:06:21,274 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-20 23:06:21] 2025-12-20 22:06:21,274 | INFO     | traces error code: 0
[2025-12-20 23:06:21] 2025-12-20 22:06:21,275 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-20 23:06:21] 2025-12-20 22:06:21,353 [wrapper] ==== pilot stdout END ====
[2025-12-20 23:06:21] 2025-12-20 22:06:21,355 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-20 23:06:21] 2025-12-20 22:06:21,358 [wrapper] pilotpid: 1206320
[2025-12-20 23:06:21] 2025-12-20 22:06:21,360 [wrapper] Pilot exit status: 0
[2025-12-20 23:06:21] 2025-12-20 22:06:21,366 [wrapper] pandaids: 6935102210
[2025-12-20 23:06:21] 2025-12-20 22:06:21,378 [wrapper] cleanup supervisor_pilot 1227315 1206321
[2025-12-20 23:06:21] 2025-12-20 22:06:21,380 [wrapper] Test setup, not cleaning
[2025-12-20 23:06:21] 2025-12-20 22:06:21,383 [wrapper] apfmon messages muted
[2025-12-20 23:06:21] 2025-12-20 22:06:21,385 [wrapper] ==== wrapper stdout END ====
[2025-12-20 23:06:21] 2025-12-20 22:06:21,387 [wrapper] ==== wrapper stderr END ====
[2025-12-20 23:06:21]  *** Error codes and diagnostics ***
[2025-12-20 23:06:21]     "exeErrorCode": 0,
[2025-12-20 23:06:21]     "exeErrorDiag": "",
[2025-12-20 23:06:21]     "pilotErrorCode": 0,
[2025-12-20 23:06:21]     "pilotErrorDiag": "",
[2025-12-20 23:06:21]  *** Listing of results directory ***
[2025-12-20 23:06:21] total 428684
[2025-12-20 23:06:21] -rwx------ 1 boinc boinc     36322 Dec 19 06:09 runpilot2-wrapper.sh
[2025-12-20 23:06:21] -rw-r--r-- 1 boinc boinc      5112 Dec 19 06:12 queuedata.json
[2025-12-20 23:06:21] -rw-r--r-- 1 boinc boinc    579449 Dec 19 06:13 pilot3.tar.gz
[2025-12-20 23:06:21] -rw-r--r-- 1 boinc boinc       100 Dec 20 21:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-20 23:06:21] -rwxr-xr-x 1 boinc boinc      7986 Dec 20 21:00 run_atlas
[2025-12-20 23:06:21] -rw-r--r-- 1 boinc boinc       105 Dec 20 21:00 job.xml
[2025-12-20 23:06:21] -rw-r--r-- 2 boinc boinc 254792176 Dec 20 21:00 EVNT.47929278._000043.pool.root.1
[2025-12-20 23:06:21] drwxrwx--x 2 boinc boinc      4096 Dec 20 21:00 shared
[2025-12-20 23:06:21] -rw-r--r-- 2 boinc boinc    592409 Dec 20 21:00 input.tar.gz
[2025-12-20 23:06:21] -rw-r--r-- 2 boinc boinc     15847 Dec 20 21:00 start_atlas.sh
[2025-12-20 23:06:21] -rw-r--r-- 1 boinc boinc         0 Dec 20 21:00 boinc_setup_complete
[2025-12-20 23:06:21] -rw-r--r-- 1 boinc boinc      6205 Dec 20 21:00 init_data.xml
[2025-12-20 23:06:21] -rw-r--r-- 1 boinc boinc         0 Dec 20 21:00 boinc_lockfile
[2025-12-20 23:06:21] -rw-r--r-- 1 boinc boinc      2566 Dec 20 21:00 pandaJob.out
[2025-12-20 23:06:21] -rw------- 1 boinc boinc    988154 Dec 20 21:01 agis_schedconf.cvmfs.json
[2025-12-20 23:06:21] -rw------- 1 boinc boinc   1516240 Dec 20 21:01 agis_ddmendpoints.agis.ALL.json
[2025-12-20 23:06:21] drwx------ 5 boinc boinc      4096 Dec 20 21:01 pilot3
[2025-12-20 23:06:21] -rw------- 1 boinc boinc 177529340 Dec 20 23:04 HITS.47929280._001298.pool.root.1
[2025-12-20 23:06:21] -rw-r--r-- 1 boinc boinc       529 Dec 20 23:04 boinc_task_state.xml
[2025-12-20 23:06:21] -rw------- 1 boinc boinc      1017 Dec 20 23:05 memory_monitor_summary.json
[2025-12-20 23:06:21] -rw------- 1 boinc boinc    289050 Dec 20 23:05 log.47929280._001298.job.log.tgz.1
[2025-12-20 23:06:21] -rw------- 1 boinc boinc      7744 Dec 20 23:05 heartbeat.json
[2025-12-20 23:06:21] -rw-r--r-- 1 boinc boinc        27 Dec 20 23:05 wrapper_checkpoint.txt
[2025-12-20 23:06:21] -rw-r--r-- 1 boinc boinc      8192 Dec 20 23:05 boinc_mmap_file
[2025-12-20 23:06:21] -rw------- 1 boinc boinc        95 Dec 20 23:05 pilot_heartbeat.json
[2025-12-20 23:06:21] -rw------- 1 boinc boinc      5010 Dec 20 23:06 pilotlog.txt
[2025-12-20 23:06:21] -rw------- 1 boinc boinc   1077309 Dec 20 23:06 log.47929280._001298.job.log.1
[2025-12-20 23:06:21] -rw------- 1 boinc boinc       357 Dec 20 23:06 output.list
[2025-12-20 23:06:21] -rw-r--r-- 1 boinc boinc       620 Dec 20 23:06 runtime_log
[2025-12-20 23:06:21] -rw------- 1 boinc boinc   1382400 Dec 20 23:06 result.tar.gz
[2025-12-20 23:06:21] -rw-r--r-- 1 boinc boinc      8897 Dec 20 23:06 runtime_log.err
[2025-12-20 23:06:21] -rw------- 1 boinc boinc       660 Dec 20 23:06 lFzKDmRvhq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmykaKDmELcfWm.diag
[2025-12-20 23:06:21] -rw-r--r-- 1 boinc boinc     20905 Dec 20 23:06 stderr.txt
[2025-12-20 23:06:21] HITS file was successfully produced:
[2025-12-20 23:06:21] -rw------- 1 boinc boinc 177529340 Dec 20 23:04 shared/HITS.pool.root.1
[2025-12-20 23:06:21]  *** Contents of shared directory: ***
[2025-12-20 23:06:21] total 424152
[2025-12-20 23:06:21] -rw-r--r-- 2 boinc boinc 254792176 Dec 20 21:00 ATLAS.root_0
[2025-12-20 23:06:21] -rw-r--r-- 2 boinc boinc    592409 Dec 20 21:00 input.tar.gz
[2025-12-20 23:06:21] -rw-r--r-- 2 boinc boinc     15847 Dec 20 21:00 start_atlas.sh
[2025-12-20 23:06:21] -rw------- 1 boinc boinc 177529340 Dec 20 23:04 HITS.pool.root.1
[2025-12-20 23:06:21] -rw------- 1 boinc boinc   1382400 Dec 20 23:06 result.tar.gz
23:06:42 (1202606): run_atlas exited; CPU time 14502.605026
23:06:42 (1202606): called boinc_finish(0)

</stderr_txt>
]]>

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