Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:43:11 (327032): wrapper (7.7.26015): starting
04:43:11 (327032): wrapper: running run_atlas (--nthreads 4)
[2025-12-20 04:43:11] Arguments: --nthreads 4
[2025-12-20 04:43:11] Threads: 4
[2025-12-20 04:43:11] Checking for CVMFS
[2025-12-20 04:43:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-20 04:43:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-20 04:43:11] Running cvmfs_config stat atlas.cern.ch
[2025-12-20 04:43:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-20 04:43:11] 2.9.2.0 4066 1327 84908 154211 2 57 26157396 36864001 0 130560 0 857955 99.990 43863 13889 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-20 04:43:11] CVMFS is ok
[2025-12-20 04:43:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-20 04:43:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-20 04:43:11] Further information can be found at the LHC@home message board.
[2025-12-20 04:43:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-20 04:43:11] Checking for apptainer binary...
[2025-12-20 04:43:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-20 04:43:11] Running /usr/bin/apptainer --version
[2025-12-20 04:43:11] apptainer version 1.4.1-1.1
[2025-12-20 04:43:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-20 04:43:11] atlasA237
[2025-12-20 04:43:11] apptainer works
[2025-12-20 04:43:11] Set ATHENA_PROC_NUMBER=4
[2025-12-20 04:43:11] Set ATHENA_CORE_NUMBER=4
[2025-12-20 04:43:11] Starting ATLAS job with PandaID=6934552623
[2025-12-20 04:43:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-20 04:46:46]  *** The last 200 lines of the pilot log: ***
[2025-12-20 04:46:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-20 04:46:46] HOME_URL="https://www.centos.org/"
[2025-12-20 04:46:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-20 04:46:46] 
[2025-12-20 04:46:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-20 04:46:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-20 04:46:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-20 04:46:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-20 04:46:46] 
[2025-12-20 04:46:46] 2025-12-20 03:46:14,963 | INFO     | ***************************************
[2025-12-20 04:46:46] 2025-12-20 03:46:15,467 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-20 04:46:46] 2025-12-20 03:46:15,484 | INFO     | sufficient remaining disk space (332946997248 B)
[2025-12-20 04:46:46] 2025-12-20 03:46:15,484 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-20 04:46:46] 2025-12-20 03:46:15,484 | INFO     | current server update state: UPDATING_FINAL
[2025-12-20 04:46:46] 2025-12-20 03:46:15,484 | INFO     | update_server=False
[2025-12-20 04:46:46] 2025-12-20 03:46:15,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-20 04:46:46] 2025-12-20 03:46:15,484 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-20 04:46:46] 2025-12-20 03:46:15,484 | INFO     | aborting loop
[2025-12-20 04:46:46] 2025-12-20 03:46:15,484 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-20 04:46:46] 2025-12-20 03:46:15,485 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-20 04:46:46] 2025-12-20 03:46:15,874 | INFO     | all data control threads have been joined
[2025-12-20 04:46:46] 2025-12-20 03:46:16,490 | INFO     | [job] retrieve thread has finished
[2025-12-20 04:46:46] 2025-12-20 03:46:16,490 | INFO     | [job] job monitor thread has finished
[2025-12-20 04:46:46] 2025-12-20 03:46:16,490 | INFO     | [job] queue monitor thread has finished
[2025-12-20 04:46:46] 2025-12-20 03:46:16,501 | INFO     | [job] create_data_payload thread has finished
[2025-12-20 04:46:46] 2025-12-20 03:46:16,578 | INFO     | [payload] validate_pre thread has finished
[2025-12-20 04:46:46] 2025-12-20 03:46:16,740 | INFO     | all job control threads have been joined
[2025-12-20 04:46:46] 2025-12-20 03:46:16,819 | INFO     | [data] copytool_in thread has finished
[2025-12-20 04:46:46] 2025-12-20 03:46:16,857 | INFO     | [payload] failed_post thread has finished
[2025-12-20 04:46:46] 2025-12-20 03:46:16,880 | INFO     | [data] control thread has finished
[2025-12-20 04:46:46] 2025-12-20 03:46:16,904 | INFO     | all payload control threads have been joined
[2025-12-20 04:46:46] 2025-12-20 03:46:17,491 | INFO     | [data] copytool_out thread has finished
[2025-12-20 04:46:46] 2025-12-20 03:46:17,730 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-20 04:46:46] 2025-12-20 03:46:17,745 | INFO     | [job] control thread has finished
[2025-12-20 04:46:46] 2025-12-20 03:46:17,844 | INFO     | [payload] execute_payloads thread has finished
[2025-12-20 04:46:46] 2025-12-20 03:46:17,895 | INFO     | [job] validate thread has finished
[2025-12-20 04:46:46] 2025-12-20 03:46:17,905 | INFO     | [payload] control thread has finished
[2025-12-20 04:46:46] 2025-12-20 03:46:17,918 | INFO     | [payload] validate_post thread has finished
[2025-12-20 04:46:46] 2025-12-20 03:46:18,588 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-20 04:46:46] 2025-12-20 03:46:19,171 | INFO     | [monitor] cgroup control has ended
[2025-12-20 04:46:46] 2025-12-20 03:46:22,595 | INFO     | [data] queue_monitor thread has finished
[2025-12-20 04:46:46] 2025-12-20 03:46:22,891 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140364753467200)>', '<ExcThread(monitor, started 140363868129024)>']
[2025-12-20 04:46:46] 2025-12-20 03:46:27,917 | INFO     | all workflow threads have been joined
[2025-12-20 04:46:46] 2025-12-20 03:46:27,917 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-20 04:46:46] 2025-12-20 03:46:27,917 | INFO     | traces error code: 0
[2025-12-20 04:46:46] 2025-12-20 03:46:27,917 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-20 04:46:46] 2025-12-20 03:46:45,955 | INFO     | PID=330837 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-20 04:46:46] 2025-12-20 03:46:45,955 | INFO     | found 0 job(s) in 20 queues
[2025-12-20 04:46:46] 2025-12-20 03:46:45,956 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-20 04:46:46] 2025-12-20 03:46:45,956 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-20 04:46:46] 2025-12-20 03:46:45,956 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-20 04:46:46] 2025-12-20 03:46:45,956 | INFO     | [monitor] control thread has ended
[2025-12-20 04:46:46] 2025-12-20 03:46:46,015 [wrapper] ==== pilot stdout END ====
[2025-12-20 04:46:46] 2025-12-20 03:46:46,019 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-20 04:46:46] 2025-12-20 03:46:46,023 [wrapper] pilotpid: 330837
[2025-12-20 04:46:46] 2025-12-20 03:46:46,027 [wrapper] Pilot exit status: 0
[2025-12-20 04:46:46] 2025-12-20 03:46:46,038 [wrapper] pandaids: 6934552623
[2025-12-20 04:46:46] 2025-12-20 03:46:46,058 [wrapper] cleanup supervisor_pilot  330843 330838
[2025-12-20 04:46:46] 2025-12-20 03:46:46,062 [wrapper] Test setup, not cleaning
[2025-12-20 04:46:46] 2025-12-20 03:46:46,065 [wrapper] apfmon messages muted
[2025-12-20 04:46:46] 2025-12-20 03:46:46,069 [wrapper] ==== wrapper stdout END ====
[2025-12-20 04:46:46] 2025-12-20 03:46:46,073 [wrapper] ==== wrapper stderr END ====
[2025-12-20 04:46:46]  *** Error codes and diagnostics ***
[2025-12-20 04:46:46]     "exeErrorCode": 65,
[2025-12-20 04:46:46]     "exeErrorDiag": "EVNTtoHITS got a SIGHUP signal (exit code 129)",
[2025-12-20 04:46:46]     "pilotErrorCode": 1305,
[2025-12-20 04:46:46]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGHUP signal (exit code 129)",
[2025-12-20 04:46:46]  *** Listing of results directory ***
[2025-12-20 04:46:46] total 224252
[2025-12-20 04:46:46] -rw-r--r-- 1 boinc boinc    579449 Dec 19 00:10 pilot3.tar.gz
[2025-12-20 04:46:46] -rw-r--r-- 1 boinc boinc      5112 Dec 19 00:11 queuedata.json
[2025-12-20 04:46:46] -rwx------ 1 boinc boinc     36322 Dec 19 00:12 runpilot2-wrapper.sh
[2025-12-20 04:46:46] -rw-r--r-- 1 boinc boinc       100 Dec 20 04:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-20 04:46:46] -rwxr-xr-x 1 boinc boinc      7986 Dec 20 04:43 run_atlas
[2025-12-20 04:46:46] -rw-r--r-- 1 boinc boinc       105 Dec 20 04:43 job.xml
[2025-12-20 04:46:46] -rw-r--r-- 2 boinc boinc 225526785 Dec 20 04:43 EVNT.47898761._000989.pool.root.1
[2025-12-20 04:46:46] -rw-r--r-- 2 boinc boinc    592400 Dec 20 04:43 input.tar.gz
[2025-12-20 04:46:46] -rw-r--r-- 2 boinc boinc     15847 Dec 20 04:43 start_atlas.sh
[2025-12-20 04:46:46] drwxrwx--x 2 boinc boinc      4096 Dec 20 04:43 shared
[2025-12-20 04:46:46] -rw-r--r-- 1 boinc boinc         0 Dec 20 04:43 boinc_setup_complete
[2025-12-20 04:46:46] -rw-r--r-- 1 boinc boinc      6372 Dec 20 04:43 init_data.xml
[2025-12-20 04:46:46] -rw-r--r-- 1 boinc boinc         0 Dec 20 04:43 boinc_lockfile
[2025-12-20 04:46:46] -rw-r--r-- 1 boinc boinc      2508 Dec 20 04:43 pandaJob.out
[2025-12-20 04:46:46] -rw------- 1 boinc boinc    988138 Dec 20 04:43 agis_schedconf.cvmfs.json
[2025-12-20 04:46:46] -rw------- 1 boinc boinc   1516240 Dec 20 04:43 agis_ddmendpoints.agis.ALL.json
[2025-12-20 04:46:46] drwx------ 5 boinc boinc      4096 Dec 20 04:43 pilot3
[2025-12-20 04:46:46] -rw------- 1 boinc boinc       980 Dec 20 04:44 memory_monitor_summary.json
[2025-12-20 04:46:46] -rw------- 1 boinc boinc     21095 Dec 20 04:44 log.47898763._025691.job.log.tgz.1
[2025-12-20 04:46:46] -rw-r--r-- 1 boinc boinc       522 Dec 20 04:44 boinc_task_state.xml
[2025-12-20 04:46:46] -rw------- 1 boinc boinc      8387 Dec 20 04:46 heartbeat.json
[2025-12-20 04:46:46] -rw-r--r-- 1 boinc boinc      8192 Dec 20 04:46 boinc_mmap_file
[2025-12-20 04:46:46] -rw-r--r-- 1 boinc boinc        22 Dec 20 04:46 wrapper_checkpoint.txt
[2025-12-20 04:46:46] -rw------- 1 boinc boinc       746 Dec 20 04:46 pilotlog.txt
[2025-12-20 04:46:46] -rw------- 1 boinc boinc        95 Dec 20 04:46 pilot_heartbeat.json
[2025-12-20 04:46:46] -rw------- 1 boinc boinc     84197 Dec 20 04:46 log.47898763._025691.job.log.1
[2025-12-20 04:46:46] -rw------- 1 boinc boinc       188 Dec 20 04:46 output.list
[2025-12-20 04:46:46] -rw-r--r-- 1 boinc boinc       620 Dec 20 04:46 runtime_log
[2025-12-20 04:46:46] -rw------- 1 boinc boinc    122880 Dec 20 04:46 result.tar.gz
[2025-12-20 04:46:46] -rw-r--r-- 1 boinc boinc      8759 Dec 20 04:46 runtime_log.err
[2025-12-20 04:46:46] -rw------- 1 boinc boinc       651 Dec 20 04:46 ZcFODmVLcq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFEaKDmzczudn.diag
[2025-12-20 04:46:46] -rw-r--r-- 1 boinc boinc      8628 Dec 20 04:46 stderr.txt
[2025-12-20 04:46:46] No HITS result produced
[2025-12-20 04:46:46]  *** Contents of shared directory: ***
[2025-12-20 04:46:46] total 220964
[2025-12-20 04:46:46] -rw-r--r-- 2 boinc boinc 225526785 Dec 20 04:43 ATLAS.root_0
[2025-12-20 04:46:46] -rw-r--r-- 2 boinc boinc    592400 Dec 20 04:43 input.tar.gz
[2025-12-20 04:46:46] -rw-r--r-- 2 boinc boinc     15847 Dec 20 04:43 start_atlas.sh
[2025-12-20 04:46:46] -rw------- 1 boinc boinc    122880 Dec 20 04:46 result.tar.gz
04:46:47 (327032): run_atlas exited; CPU time 25.712979
04:46:47 (327032): called boinc_finish(0)

</stderr_txt>
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