Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:50:31 (834449): wrapper (7.7.26015): starting
19:50:31 (834449): wrapper: running run_atlas (--nthreads 4)
[2025-12-19 19:50:32] Arguments: --nthreads 4
[2025-12-19 19:50:32] Threads: 4
[2025-12-19 19:50:32] Checking for CVMFS
[2025-12-19 19:50:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 19:50:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 19:50:32] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 19:50:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 19:50:32] 2.9.2.0 3086 2699 93776 154198 3 57 33633883 36864001 0 130560 0 2166284 99.991 101726 16540 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-19 19:50:32] CVMFS is ok
[2025-12-19 19:50:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-19 19:50:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-19 19:50:32] Further information can be found at the LHC@home message board.
[2025-12-19 19:50:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 19:50:32] Checking for apptainer binary...
[2025-12-19 19:50:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 19:50:32] Running /usr/bin/apptainer --version
[2025-12-19 19:50:32] apptainer version 1.4.1-1.1
[2025-12-19 19:50:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 19:50:32] cosA131b
[2025-12-19 19:50:32] apptainer works
[2025-12-19 19:50:32] Set ATHENA_PROC_NUMBER=4
[2025-12-19 19:50:32] Set ATHENA_CORE_NUMBER=4
[2025-12-19 19:50:32] Starting ATLAS job with PandaID=6934551388
[2025-12-19 19:50:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 21:29:54]  *** The last 200 lines of the pilot log: ***
[2025-12-19 21:29:54]  protocol_id=None
[2025-12-19 21:29:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-19 21:29:54]  replicas=None
[2025-12-19 21:29:54]  scope=mc23_13p6TeV
[2025-12-19 21:29:54]  status=None
[2025-12-19 21:29:54]  status_code=0
[2025-12-19 21:29:54]  storage_token=
[2025-12-19 21:29:54]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6934551388/log.47898763._025356.job.log.tgz.1
[2025-12-19 21:29:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/47/log.47898763._025356.job.log.tgz.1
[2025-12-19 21:29:54]  workdir=None
[2025-12-19 21:29:54] ]
[2025-12-19 21:29:54] 2025-12-19 20:28:41,491 | INFO     | transferring file log.47898763._025356.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6934551388/log.47898763._025356.job.log.tgz.1 to /local/data/boinc/
[2025-12-19 21:29:54] 2025-12-19 20:28:41,492 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6934551388/log.47898763._025356.job.log.tgz.1 /local/data/boinc/slots/0/log.47898763._0253
[2025-12-19 21:29:54] 2025-12-19 20:28:41,510 | INFO     | adding to output.list: log.47898763._025356.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/47/log.47898763._025356.job.log.tg
[2025-12-19 21:29:54] 2025-12-19 20:28:41,510 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-19 21:29:54] 2025-12-19 20:28:41,510 | INFO     | summary of transferred files:
[2025-12-19 21:29:54] 2025-12-19 20:28:41,510 | INFO     |  -- lfn=log.47898763._025356.job.log.tgz.1, status_code=0, status=transferred
[2025-12-19 21:29:54] 2025-12-19 20:28:41,511 | INFO     | stage-out finished correctly
[2025-12-19 21:29:54] 2025-12-19 20:28:41,892 | INFO     | time since job start (5881s) is within the limit (174528.0s)
[2025-12-19 21:29:54] 2025-12-19 20:28:42,955 | INFO     | PID=838242 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-19 21:29:54] 2025-12-19 20:28:43,464 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-19 21:29:54] 2025-12-19 20:28:43,505 | INFO     | job 6934551388 has state=finished
[2025-12-19 21:29:54] 2025-12-19 20:28:43,505 | INFO     | preparing for final server update for job 6934551388 in state='finished'
[2025-12-19 21:29:54] 2025-12-19 20:28:43,505 | INFO     | this job has now completed (state=finished)
[2025-12-19 21:29:54] 2025-12-19 20:28:43,505 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-19 21:29:54] 2025-12-19 20:28:43,505 | INFO     | log transfer has been attempted: DONE
[2025-12-19 21:29:54] 2025-12-19 20:28:43,505 | INFO     | job 6934551388 has finished - writing final server update
[2025-12-19 21:29:54] 2025-12-19 20:28:43,505 | INFO     | total number of processed events: 400 (read)
[2025-12-19 21:29:54] 2025-12-19 20:28:43,506 | INFO     | executing command: lscpu
[2025-12-19 21:29:54] 2025-12-19 20:28:43,525 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-19 21:29:54] 2025-12-19 20:28:43,660 | INFO     | monitor loop #452: job 0:6934551388 is in state 'finished'
[2025-12-19 21:29:54] 2025-12-19 20:28:43,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 21:29:54] 2025-12-19 20:28:43,955 | INFO     | time since job start (5883s) is within the limit (174528.0s)
[2025-12-19 21:29:54] 2025-12-19 20:28:45,960 | INFO     | time since job start (5885s) is within the limit (174528.0s)
[2025-12-19 21:29:54] 2025-12-19 20:28:46,165 | INFO     | monitor loop #453: job 0:6934551388 is in state 'finished'
[2025-12-19 21:29:54] 2025-12-19 20:28:46,165 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 21:29:54] 2025-12-19 20:28:46,964 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-19 21:29:54] 2025-12-19 20:28:46,966 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3227.6627499999995
[2025-12-19 21:29:54] 2025-12-19 20:28:46,967 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6934551388/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 21:29:54] 2025-12-19 20:28:46,967 | INFO     | extracted standard info from prmon json
[2025-12-19 21:29:54] 2025-12-19 20:28:46,968 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 21:29:54] 2025-12-19 20:28:46,968 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 21:29:54] 2025-12-19 20:28:46,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 21:29:54] 2025-12-19 20:28:46,968 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 21:29:54] 2025-12-19 20:28:46,969 | INFO     | fitting pss+swap vs Time
[2025-12-19 21:29:54] 2025-12-19 20:28:46,969 | INFO     | sum of square deviations: 218571540.0
[2025-12-19 21:29:54] 2025-12-19 20:28:46,969 | INFO     | sum of deviations: -5811060324.000001
[2025-12-19 21:29:54] 2025-12-19 20:28:46,969 | INFO     | mean x: 1766173252.0
[2025-12-19 21:29:54] 2025-12-19 20:28:46,969 | INFO     | mean y: 2440813.0786516853
[2025-12-19 21:29:54] 2025-12-19 20:28:46,969 | INFO     | intersect: 46958871234.0166
[2025-12-19 21:29:54] 2025-12-19 20:28:46,969 | INFO     | chi2: 0.09527012986892588
[2025-12-19 21:29:54] 2025-12-19 20:28:46,969 | INFO     | current memory leak: -26.59 B/s (using 89 data points, chi2=0.10)
[2025-12-19 21:29:54] 2025-12-19 20:28:46,969 | INFO     | could have reported an average CPU frequency of 3717 MHz (7 samples)
[2025-12-19 21:29:54] 2025-12-19 20:28:46,969 | INFO     | ..............................
[2025-12-19 21:29:54] 2025-12-19 20:28:46,969 | INFO     | . Timing measurements:
[2025-12-19 21:29:54] 2025-12-19 20:28:46,969 | INFO     | . get job = 0 s
[2025-12-19 21:29:54] 2025-12-19 20:28:46,969 | INFO     | . initial setup = 1 s
[2025-12-19 21:29:54] 2025-12-19 20:28:46,969 | INFO     | . payload setup = 4 s
[2025-12-19 21:29:54] 2025-12-19 20:28:46,970 | INFO     | . stage-in = 0 s
[2025-12-19 21:29:54] 2025-12-19 20:28:46,970 | INFO     | . payload execution = 5858 s
[2025-12-19 21:29:54] 2025-12-19 20:28:46,970 | INFO     | . stage-out = 0 s
[2025-12-19 21:29:54] 2025-12-19 20:28:46,970 | INFO     | . log creation = 0 s
[2025-12-19 21:29:54] 2025-12-19 20:28:46,970 | INFO     | ..............................
[2025-12-19 21:29:54] 2025-12-19 20:28:47,009 | INFO     | 
[2025-12-19 21:29:54] 2025-12-19 20:28:47,009 | INFO     | job summary report
[2025-12-19 21:29:54] 2025-12-19 20:28:47,009 | INFO     | --------------------------------------------------
[2025-12-19 21:29:54] 2025-12-19 20:28:47,009 | INFO     | PanDA job id: 6934551388
[2025-12-19 21:29:54] 2025-12-19 20:28:47,009 | INFO     | task id: 47898763
[2025-12-19 21:29:54] 2025-12-19 20:28:47,009 | INFO     | errors: (none)
[2025-12-19 21:29:54] 2025-12-19 20:28:47,009 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 21:29:54] 2025-12-19 20:28:47,009 | INFO     | pilot state: finished 
[2025-12-19 21:29:54] 2025-12-19 20:28:47,009 | INFO     | transexitcode: 0
[2025-12-19 21:29:54] 2025-12-19 20:28:47,009 | INFO     | exeerrorcode: 0
[2025-12-19 21:29:54] 2025-12-19 20:28:47,009 | INFO     | exeerrordiag: 
[2025-12-19 21:29:54] 2025-12-19 20:28:47,010 | INFO     | exitcode: 0
[2025-12-19 21:29:54] 2025-12-19 20:28:47,010 | INFO     | exitmsg: OK
[2025-12-19 21:29:54] 2025-12-19 20:28:47,010 | INFO     | cpuconsumptiontime: 22502 s
[2025-12-19 21:29:54] 2025-12-19 20:28:47,010 | INFO     | nevents: 400
[2025-12-19 21:29:54] 2025-12-19 20:28:47,010 | INFO     | neventsw: 0
[2025-12-19 21:29:54] 2025-12-19 20:28:47,010 | INFO     | pid: 844831
[2025-12-19 21:29:54] 2025-12-19 20:28:47,010 | INFO     | pgrp: 844831
[2025-12-19 21:29:54] 2025-12-19 20:28:47,010 | INFO     | corecount: 4
[2025-12-19 21:29:54] 2025-12-19 20:28:47,010 | INFO     | event service: False
[2025-12-19 21:29:54] 2025-12-19 20:28:47,010 | INFO     | sizes: {0: 2283961, 1: 2283961, 4: 2284251, 11: 2284279, 5866: 2320142, 5868: 2320142, 5872: 2320464}
[2025-12-19 21:29:54] 2025-12-19 20:28:47,010 | INFO     | --------------------------------------------------
[2025-12-19 21:29:54] 2025-12-19 20:28:47,010 | INFO     | 
[2025-12-19 21:29:54] 2025-12-19 20:28:47,010 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-19 21:29:54] 2025-12-19 20:28:47,027 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 21:29:54] 2025-12-19 20:28:47,027 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 21:29:54] 2025-12-19 20:28:47,027 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 21:29:54] 2025-12-19 20:28:47,027 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 21:29:54] 2025-12-19 20:28:47,027 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 21:29:54] 2025-12-19 20:28:47,027 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 21:29:54] 2025-12-19 20:28:47,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 21:29:54] 2025-12-19 20:28:47,028 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 21:29:54] 2025-12-19 20:28:47,028 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 21:29:54] 2025-12-19 20:28:47,028 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 21:29:54] 2025-12-19 20:28:47,028 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 21:29:54] 2025-12-19 20:28:47,028 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 21:29:54] 2025-12-19 20:28:47,028 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 21:29:54] 2025-12-19 20:28:47,028 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 21:29:54] 2025-12-19 20:28:47,028 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 21:29:54] 2025-12-19 20:28:47,028 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 21:29:54] 2025-12-19 20:28:47,028 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 21:29:54] 2025-12-19 20:28:47,028 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 21:29:54] 2025-12-19 20:28:47,028 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 21:29:54] 2025-12-19 20:28:47,028 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 21:29:54] 2025-12-19 20:28:47,028 | INFO     | job 6934551388 has completed (purged errors)
[2025-12-19 21:29:54] 2025-12-19 20:28:47,028 | INFO     | overall cleanup function is called
[2025-12-19 21:29:54] 2025-12-19 20:28:48,035 | INFO     | --- collectZombieJob: --- 10, [844831]
[2025-12-19 21:29:54] 2025-12-19 20:28:48,035 | INFO     | zombie collector waiting for pid 844831
[2025-12-19 21:29:54] 2025-12-19 20:28:48,035 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 21:29:54] 2025-12-19 20:28:48,035 | INFO     | collected zombie processes
[2025-12-19 21:29:54] 2025-12-19 20:28:48,035 | INFO     | will attempt to kill all subprocesses of pid=844831
[2025-12-19 21:29:54] 2025-12-19 20:28:48,079 | INFO     | process IDs to be killed: [844831] (in reverse order)
[2025-12-19 21:29:54] 2025-12-19 20:28:48,112 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 21:29:54] 2025-12-19 20:28:48,112 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 21:29:54] 2025-12-19 20:28:48,114 | INFO     | did not find any defunct processes belonging to 844831
[2025-12-19 21:29:54] 2025-12-19 20:28:48,115 | INFO     | did not find any defunct processes belonging to 844831
[2025-12-19 21:29:54] 2025-12-19 20:28:48,115 | INFO     | ready for new job
[2025-12-19 21:29:54] 2025-12-19 20:28:48,115 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 21:29:54] 2025-12-19 20:28:48,116 | INFO     | ***************************************
[2025-12-19 21:29:54] 2025-12-19 20:28:48,116 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 21:29:54] 2025-12-19 20:28:48,116 | INFO     | ***************************************
[2025-12-19 21:29:54] 2025-12-19 20:28:48,116 | INFO     | 
[2025-12-19 21:29:54] 2025-12-19 20:28:48,116 | INFO     | architecture information:
[2025-12-19 21:29:54] 2025-12-19 20:28:48,117 | INFO     | executing command: cat /etc/os-release
[2025-12-19 21:29:54] 2025-12-19 20:28:48,130 | INFO     | cat /etc/os-release:
[2025-12-19 21:29:54] NAME="CentOS Linux"
[2025-12-19 21:29:54] VERSION="7 (Core)"
[2025-12-19 21:29:54] ID="centos"
[2025-12-19 21:29:54] ID_LIKE="rhel fedora"
[2025-12-19 21:29:54] VERSION_ID="7"
[2025-12-19 21:29:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 21:29:54] ANSI_COLOR="0;31"
[2025-12-19 21:29:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 21:29:54] HOME_URL="https://www.centos.org/"
[2025-12-19 21:29:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 21:29:54] 
[2025-12-19 21:29:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 21:29:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 21:29:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 21:29:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 21:29:54] 
[2025-12-19 21:29:54] 2025-12-19 20:28:48,130 | INFO     | ***************************************
[2025-12-19 21:29:54] 2025-12-19 20:28:48,634 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-19 21:29:54] 2025-12-19 20:28:48,651 | INFO     | sufficient remaining disk space (321161003008 B)
[2025-12-19 21:29:54] 2025-12-19 20:28:48,651 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 21:29:54] 2025-12-19 20:28:48,651 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 21:29:54] 2025-12-19 20:28:48,651 | INFO     | update_server=False
[2025-12-19 21:29:54] 2025-12-19 20:28:48,651 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 21:29:54] 2025-12-19 20:28:48,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 21:29:54] 2025-12-19 20:28:48,669 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-19 21:29:54] 2025-12-19 20:28:48,669 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-19 21:29:54] 2025-12-19 20:28:48,669 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 21:29:54] 2025-12-19 20:28:48,669 | INFO     | will abort loop
[2025-12-19 21:29:54] 2025-12-19 20:28:48,797 | INFO     | all job control threads have been joined
[2025-12-19 21:29:54] 2025-12-19 20:28:49,107 | INFO     | all data control threads have been joined
[2025-12-19 21:29:54] 2025-12-19 20:28:49,227 | INFO     | all payload control threads have been joined
[2025-12-19 21:29:54] 2025-12-19 20:28:49,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 21:29:54] 2025-12-19 20:28:49,563 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 21:29:54] 2025-12-19 20:28:49,657 | INFO     | [job] queue monitor thread has finished
[2025-12-19 21:29:54] 2025-12-19 20:28:49,657 | INFO     | [job] retrieve thread has finished
[2025-12-19 21:29:54] 2025-12-19 20:28:49,658 | INFO     | [payload] failed_post thread has finished
[2025-12-19 21:29:54] 2025-12-19 20:28:49,675 | INFO     | [job] job monitor thread has finished
[2025-12-19 21:29:54] 2025-12-19 20:28:49,802 | INFO     | [job] control thread has finished
[2025-12-19 21:29:54] 2025-12-19 20:28:49,831 | INFO     | [data] copytool_in thread has finished
[2025-12-19 21:29:54] 2025-12-19 20:28:50,113 | INFO     | [data] control thread has finished
[2025-12-19 21:29:54] 2025-12-19 20:28:50,162 | INFO     | [payload] validate_post thread has finished
[2025-12-19 21:29:54] 2025-12-19 20:28:50,233 | INFO     | [payload] control thread has finished
[2025-12-19 21:29:54] 2025-12-19 20:28:50,604 | INFO     | [job] validate thread has finished
[2025-12-19 21:29:54] 2025-12-19 20:28:50,687 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 21:29:54] 2025-12-19 20:28:50,831 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 21:29:54] 2025-12-19 20:28:51,012 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 21:29:54] 2025-12-19 20:28:51,569 | INFO     | [data] copytool_out thread has finished
[2025-12-19 21:29:54] 2025-12-19 20:28:53,521 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 21:29:54] 2025-12-19 20:28:58,907 | INFO     | job.realtimelogging is not enabled
[2025-12-19 21:29:54] 2025-12-19 20:28:59,913 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 21:29:54] 2025-12-19 20:29:19,093 | INFO     | PID=838242 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-19 21:29:54] 2025-12-19 20:29:19,093 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 21:29:54] 2025-12-19 20:29:19,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 21:29:54] 2025-12-19 20:29:19,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 21:29:54] 2025-12-19 20:29:47,106 | INFO     | [monitor] cgroup control has ended
[2025-12-19 21:29:54] 2025-12-19 20:29:49,008 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140256060561216)>', '<ExcThread(monitor, started 140254908512000)>']
[2025-12-19 21:29:54] 2025-12-19 20:29:49,253 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 21:29:54] 2025-12-19 20:29:49,254 | INFO     | [monitor] control thread has ended
[2025-12-19 21:29:54] 2025-12-19 20:29:54,020 | INFO     | all workflow threads have been joined
[2025-12-19 21:29:54] 2025-12-19 20:29:54,021 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 21:29:54] 2025-12-19 20:29:54,021 | INFO     | traces error code: 0
[2025-12-19 21:29:54] 2025-12-19 20:29:54,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 21:29:54] 2025-12-19 20:29:54,101 [wrapper] ==== pilot stdout END ====
[2025-12-19 21:29:54] 2025-12-19 20:29:54,105 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 21:29:54] 2025-12-19 20:29:54,109 [wrapper] pilotpid: 838242
[2025-12-19 21:29:54] 2025-12-19 20:29:54,113 [wrapper] Pilot exit status: 0
[2025-12-19 21:29:54] 2025-12-19 20:29:54,125 [wrapper] pandaids: 6934551388
[2025-12-19 21:29:54] 2025-12-19 20:29:54,148 [wrapper] cleanup supervisor_pilot  857103 838243
[2025-12-19 21:29:54] 2025-12-19 20:29:54,152 [wrapper] Test setup, not cleaning
[2025-12-19 21:29:54] 2025-12-19 20:29:54,156 [wrapper] apfmon messages muted
[2025-12-19 21:29:54] 2025-12-19 20:29:54,160 [wrapper] ==== wrapper stdout END ====
[2025-12-19 21:29:54] 2025-12-19 20:29:54,164 [wrapper] ==== wrapper stderr END ====
[2025-12-19 21:29:54]  *** Error codes and diagnostics ***
[2025-12-19 21:29:54]     "exeErrorCode": 0,
[2025-12-19 21:29:54]     "exeErrorDiag": "",
[2025-12-19 21:29:54]     "pilotErrorCode": 0,
[2025-12-19 21:29:54]     "pilotErrorDiag": "",
[2025-12-19 21:29:54]  *** Listing of results directory ***
[2025-12-19 21:29:54] total 437312
[2025-12-19 21:29:54] -rw-r--r-- 1 boinc boinc    579449 Dec 19 00:10 pilot3.tar.gz
[2025-12-19 21:29:54] -rw-r--r-- 1 boinc boinc      5112 Dec 19 00:11 queuedata.json
[2025-12-19 21:29:54] -rwx------ 1 boinc boinc     36322 Dec 19 00:12 runpilot2-wrapper.sh
[2025-12-19 21:29:54] -rw-r--r-- 1 boinc boinc       100 Dec 19 19:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 21:29:54] -rwxr-xr-x 1 boinc boinc      7986 Dec 19 19:50 run_atlas
[2025-12-19 21:29:54] -rw-r--r-- 1 boinc boinc       105 Dec 19 19:50 job.xml
[2025-12-19 21:29:54] -rw-r--r-- 2 boinc boinc 223886689 Dec 19 19:50 EVNT.47898761._000974.pool.root.1
[2025-12-19 21:29:54] -rw-r--r-- 2 boinc boinc    592396 Dec 19 19:50 input.tar.gz
[2025-12-19 21:29:54] -rw-r--r-- 2 boinc boinc     15847 Dec 19 19:50 start_atlas.sh
[2025-12-19 21:29:54] drwxrwx--x 2 boinc boinc      4096 Dec 19 19:50 shared
[2025-12-19 21:29:54] -rw-r--r-- 1 boinc boinc         0 Dec 19 19:50 boinc_setup_complete
[2025-12-19 21:29:54] -rw-r--r-- 1 boinc boinc      6378 Dec 19 19:50 init_data.xml
[2025-12-19 21:29:54] -rw-r--r-- 1 boinc boinc         0 Dec 19 19:50 boinc_lockfile
[2025-12-19 21:29:54] -rw-r--r-- 1 boinc boinc      2508 Dec 19 19:50 pandaJob.out
[2025-12-19 21:29:54] -rw------- 1 boinc boinc    988154 Dec 19 19:50 agis_schedconf.cvmfs.json
[2025-12-19 21:29:54] -rw------- 1 boinc boinc   1516240 Dec 19 19:50 agis_ddmendpoints.agis.ALL.json
[2025-12-19 21:29:54] drwx------ 5 boinc boinc      4096 Dec 19 19:50 pilot3
[2025-12-19 21:29:54] -rw------- 1 boinc boinc 217734726 Dec 19 21:28 HITS.47898763._025356.pool.root.1
[2025-12-19 21:29:54] -rw-r--r-- 1 boinc boinc       529 Dec 19 21:28 boinc_task_state.xml
[2025-12-19 21:29:54] -rw------- 1 boinc boinc      1022 Dec 19 21:28 memory_monitor_summary.json
[2025-12-19 21:29:54] -rw------- 1 boinc boinc    279106 Dec 19 21:28 log.47898763._025356.job.log.tgz.1
[2025-12-19 21:29:54] -rw------- 1 boinc boinc      7763 Dec 19 21:28 heartbeat.json
[2025-12-19 21:29:54] -rw------- 1 boinc boinc        95 Dec 19 21:29 pilot_heartbeat.json
[2025-12-19 21:29:54] -rw-r--r-- 1 boinc boinc        27 Dec 19 21:29 wrapper_checkpoint.txt
[2025-12-19 21:29:54] -rw-r--r-- 1 boinc boinc      8192 Dec 19 21:29 boinc_mmap_file
[2025-12-19 21:29:54] -rw------- 1 boinc boinc      5009 Dec 19 21:29 pilotlog.txt
[2025-12-19 21:29:54] -rw------- 1 boinc boinc    854285 Dec 19 21:29 log.47898763._025356.job.log.1
[2025-12-19 21:29:54] -rw------- 1 boinc boinc       357 Dec 19 21:29 output.list
[2025-12-19 21:29:54] -rw-r--r-- 1 boinc boinc       620 Dec 19 21:29 runtime_log
[2025-12-19 21:29:54] -rw------- 1 boinc boinc   1157120 Dec 19 21:29 result.tar.gz
[2025-12-19 21:29:54] -rw-r--r-- 1 boinc boinc      8907 Dec 19 21:29 runtime_log.err
[2025-12-19 21:29:54] -rw------- 1 boinc boinc       661 Dec 19 21:29 TcnKDmHLcq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFxeKDm8BzxDm.diag
[2025-12-19 21:29:54] -rw-r--r-- 1 boinc boinc     21898 Dec 19 21:29 stderr.txt
[2025-12-19 21:29:54] HITS file was successfully produced:
[2025-12-19 21:29:54] -rw------- 1 boinc boinc 217734726 Dec 19 21:28 shared/HITS.pool.root.1
[2025-12-19 21:29:54]  *** Contents of shared directory: ***
[2025-12-19 21:29:54] total 433008
[2025-12-19 21:29:54] -rw-r--r-- 2 boinc boinc 223886689 Dec 19 19:50 ATLAS.root_0
[2025-12-19 21:29:54] -rw-r--r-- 2 boinc boinc    592396 Dec 19 19:50 input.tar.gz
[2025-12-19 21:29:54] -rw-r--r-- 2 boinc boinc     15847 Dec 19 19:50 start_atlas.sh
[2025-12-19 21:29:54] -rw------- 1 boinc boinc 217734726 Dec 19 21:28 HITS.pool.root.1
[2025-12-19 21:29:54] -rw------- 1 boinc boinc   1157120 Dec 19 21:29 result.tar.gz
21:29:55 (834449): run_atlas exited; CPU time 22521.629527
21:29:55 (834449): called boinc_finish(0)

</stderr_txt>
]]>

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