Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:27:10 (1126930): wrapper (7.7.26015): starting
08:27:10 (1126930): wrapper: running run_atlas (--nthreads 2)
[2025-12-20 08:27:10] Arguments: --nthreads 2
[2025-12-20 08:27:10] Threads: 2
[2025-12-20 08:27:10] Checking for CVMFS
[2025-12-20 08:27:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-20 08:27:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-20 08:27:10] Running cvmfs_config stat atlas.cern.ch
[2025-12-20 08:27:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-20 08:27:10] 2.9.2.0 2364742 10276 64232 154218 1 56 18524607 36864001 0 130560 0 5061602 99.986 373823 16604 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-20 08:27:10] CVMFS is ok
[2025-12-20 08:27:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-20 08:27:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-20 08:27:10] Further information can be found at the LHC@home message board.
[2025-12-20 08:27:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-20 08:27:10] Checking for apptainer binary...
[2025-12-20 08:27:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-20 08:27:10] Running /usr/bin/apptainer --version
[2025-12-20 08:27:10] apptainer version 1.4.1-1.1
[2025-12-20 08:27:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-20 08:27:11] belleA253d
[2025-12-20 08:27:11] apptainer works
[2025-12-20 08:27:11] Set ATHENA_PROC_NUMBER=2
[2025-12-20 08:27:11] Set ATHENA_CORE_NUMBER=2
[2025-12-20 08:27:11] Starting ATLAS job with PandaID=6934303805
[2025-12-20 08:27:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-20 10:33:46]  *** The last 200 lines of the pilot log: ***
[2025-12-20 10:33:46] 2025-12-20 09:33:11,716 | INFO     | job 6934303805 has finished - writing final server update
[2025-12-20 10:33:46] 2025-12-20 09:33:11,716 | INFO     | total number of processed events: 400 (read)
[2025-12-20 10:33:46] 2025-12-20 09:33:11,716 | INFO     | executing command: lscpu
[2025-12-20 10:33:46] 2025-12-20 09:33:11,726 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-20 10:33:46] 2025-12-20 09:33:12,026 | INFO     | monitor loop #579: job 0:6934303805 is in state 'finished'
[2025-12-20 10:33:46] 2025-12-20 09:33:12,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-20 10:33:46] 2025-12-20 09:33:13,195 | INFO     | time since job start (7557s) is within the limit (174528.0s)
[2025-12-20 10:33:46] 2025-12-20 09:33:13,661 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-20 10:33:46] 2025-12-20 09:33:13,662 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 4600.016874999999
[2025-12-20 10:33:46] 2025-12-20 09:33:13,662 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6934303805/memory_monitor_summary.json (trf name=prmon)
[2025-12-20 10:33:46] 2025-12-20 09:33:13,662 | INFO     | extracted standard info from prmon json
[2025-12-20 10:33:46] 2025-12-20 09:33:13,662 | INFO     | extracted standard memory fields from prmon json
[2025-12-20 10:33:46] 2025-12-20 09:33:13,662 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-20 10:33:46] 2025-12-20 09:33:13,663 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-20 10:33:46] 2025-12-20 09:33:13,663 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-20 10:33:46] 2025-12-20 09:33:13,663 | INFO     | fitting pss+swap vs Time
[2025-12-20 10:33:46] 2025-12-20 09:33:13,664 | INFO     | sum of square deviations: 591173875.0
[2025-12-20 10:33:46] 2025-12-20 09:33:13,664 | INFO     | sum of deviations: -15472003704.999998
[2025-12-20 10:33:46] 2025-12-20 09:33:13,664 | INFO     | mean x: 1766219405.5
[2025-12-20 10:33:46] 2025-12-20 09:33:13,664 | INFO     | mean y: 2381399.4838709678
[2025-12-20 10:33:46] 2025-12-20 09:33:13,664 | INFO     | intersect: 46227281283.192184
[2025-12-20 10:33:46] 2025-12-20 09:33:13,664 | INFO     | chi2: 1.6055996906967938
[2025-12-20 10:33:46] 2025-12-20 09:33:13,664 | INFO     | sum of square deviations: 522502820.0
[2025-12-20 10:33:46] 2025-12-20 09:33:13,664 | INFO     | sum of deviations: -14073629762.0
[2025-12-20 10:33:46] 2025-12-20 09:33:13,664 | INFO     | mean x: 1766219253.0
[2025-12-20 10:33:46] 2025-12-20 09:33:13,664 | INFO     | mean y: 2384506.6974789915
[2025-12-20 10:33:46] 2025-12-20 09:33:13,664 | INFO     | intersect: 47575555203.150764
[2025-12-20 10:33:46] 2025-12-20 09:33:13,664 | INFO     | chi2: 1.602867211906528
[2025-12-20 10:33:46] 2025-12-20 09:33:13,665 | INFO     | current chi2=1.602867211906528 (change=0.17018431219801752 %)
[2025-12-20 10:33:46] 2025-12-20 09:33:13,665 | INFO     | right removable region: 118
[2025-12-20 10:33:46] 2025-12-20 09:33:13,665 | INFO     | sum of square deviations: 522502820.0
[2025-12-20 10:33:46] 2025-12-20 09:33:13,665 | INFO     | sum of deviations: -30253153191.000004
[2025-12-20 10:33:46] 2025-12-20 09:33:13,665 | INFO     | mean x: 1766219558.0
[2025-12-20 10:33:46] 2025-12-20 09:33:13,665 | INFO     | mean y: 2413369.8235294116
[2025-12-20 10:33:46] 2025-12-20 09:33:13,665 | INFO     | intersect: 102267336757.44145
[2025-12-20 10:33:46] 2025-12-20 09:33:13,665 | INFO     | chi2: 0.1426986990519454
[2025-12-20 10:33:46] 2025-12-20 09:33:13,665 | INFO     | current chi2=0.1426986990519454 (change=91.11243606493113 %)
[2025-12-20 10:33:46] 2025-12-20 09:33:13,665 | INFO     | sum of square deviations: 459366752.5
[2025-12-20 10:33:46] 2025-12-20 09:33:13,665 | INFO     | sum of deviations: -25362599459.0
[2025-12-20 10:33:46] 2025-12-20 09:33:13,665 | INFO     | mean x: 1766219710.5
[2025-12-20 10:33:46] 2025-12-20 09:33:13,665 | INFO     | mean y: 2401545.035087719
[2025-12-20 10:33:46] 2025-12-20 09:33:13,665 | INFO     | intersect: 97519086917.25832
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | chi2: 0.13779296932136884
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | current chi2=0.13779296932136884 (change=3.437823724511166 %)
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | left removable region: 20
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | sum of square deviations: 291817564.5
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | sum of deviations: -13815922635.0
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | mean x: 1766219832.5
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | mean y: 2377077.6326530613
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | intersect: 83622965865.81253
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | chi2: 0.0983056188959427
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | current memory leak: -47.34 B/s (using 98 data points, chi2=0.10)
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | could have reported an average CPU frequency of 4580 MHz (8 samples)
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | ..............................
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | . Timing measurements:
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | . get job = 0 s
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | . initial setup = 1 s
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | . payload setup = 2 s
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | . stage-in = 0 s
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | . payload execution = 7533 s
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | . stage-out = 0 s
[2025-12-20 10:33:46] 2025-12-20 09:33:13,666 | INFO     | . log creation = 0 s
[2025-12-20 10:33:46] 2025-12-20 09:33:13,667 | INFO     | ..............................
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | 
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | job summary report
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | --------------------------------------------------
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | PanDA job id: 6934303805
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | task id: 47929392
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | errors: (none)
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | pilot state: finished 
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | transexitcode: 0
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | exeerrorcode: 0
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | exeerrordiag: 
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | exitcode: 0
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | exitmsg: OK
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | cpuconsumptiontime: 14729 s
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | nevents: 400
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | neventsw: 0
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | pid: 1137065
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | pgrp: 1137065
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | corecount: 2
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | event service: False
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | sizes: {0: 2284017, 2: 2284279, 10: 2284307, 7539: 2311988, 7540: 2320992, 7541: 2321048, 7545: 2321370}
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | --------------------------------------------------
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | 
[2025-12-20 10:33:46] 2025-12-20 09:33:13,695 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-20 10:33:46] 2025-12-20 09:33:13,705 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-20 10:33:46] 2025-12-20 09:33:13,705 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-20 10:33:46] 2025-12-20 09:33:13,705 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-20 10:33:46] 2025-12-20 09:33:13,705 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-20 10:33:46] 2025-12-20 09:33:13,705 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-20 10:33:46] 2025-12-20 09:33:13,705 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-20 10:33:46] 2025-12-20 09:33:13,705 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-20 10:33:46] 2025-12-20 09:33:13,706 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-20 10:33:46] 2025-12-20 09:33:13,706 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-20 10:33:46] 2025-12-20 09:33:13,706 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-20 10:33:46] 2025-12-20 09:33:13,706 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-20 10:33:46] 2025-12-20 09:33:13,706 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-20 10:33:46] 2025-12-20 09:33:13,706 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-20 10:33:46] 2025-12-20 09:33:13,706 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-20 10:33:46] 2025-12-20 09:33:13,706 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-20 10:33:46] 2025-12-20 09:33:13,706 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-20 10:33:46] 2025-12-20 09:33:13,706 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-20 10:33:46] 2025-12-20 09:33:13,706 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-20 10:33:46] 2025-12-20 09:33:13,706 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-20 10:33:46] 2025-12-20 09:33:13,706 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-20 10:33:46] 2025-12-20 09:33:13,706 | INFO     | job 6934303805 has completed (purged errors)
[2025-12-20 10:33:46] 2025-12-20 09:33:13,706 | INFO     | overall cleanup function is called
[2025-12-20 10:33:46] 2025-12-20 09:33:14,242 | INFO     | PID=1130641 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-20 10:33:46] 2025-12-20 09:33:14,712 | INFO     | --- collectZombieJob: --- 10, [1137065]
[2025-12-20 10:33:46] 2025-12-20 09:33:14,713 | INFO     | zombie collector waiting for pid 1137065
[2025-12-20 10:33:46] 2025-12-20 09:33:14,713 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-20 10:33:46] 2025-12-20 09:33:14,713 | INFO     | collected zombie processes
[2025-12-20 10:33:46] 2025-12-20 09:33:14,713 | INFO     | will attempt to kill all subprocesses of pid=1137065
[2025-12-20 10:33:46] 2025-12-20 09:33:14,751 | INFO     | process IDs to be killed: [1137065] (in reverse order)
[2025-12-20 10:33:46] 2025-12-20 09:33:14,771 | WARNING  | found no corresponding commands to process id(s)
[2025-12-20 10:33:46] 2025-12-20 09:33:14,771 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-20 10:33:46] 2025-12-20 09:33:14,772 | INFO     | did not find any defunct processes belonging to 1137065
[2025-12-20 10:33:46] 2025-12-20 09:33:14,773 | INFO     | did not find any defunct processes belonging to 1137065
[2025-12-20 10:33:46] 2025-12-20 09:33:14,773 | INFO     | ready for new job
[2025-12-20 10:33:46] 2025-12-20 09:33:14,773 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-20 10:33:46] 2025-12-20 09:33:14,773 | INFO     | ***************************************
[2025-12-20 10:33:46] 2025-12-20 09:33:14,774 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-20 10:33:46] 2025-12-20 09:33:14,774 | INFO     | ***************************************
[2025-12-20 10:33:46] 2025-12-20 09:33:14,774 | INFO     | 
[2025-12-20 10:33:46] 2025-12-20 09:33:14,774 | INFO     | architecture information:
[2025-12-20 10:33:46] 2025-12-20 09:33:14,774 | INFO     | executing command: cat /etc/os-release
[2025-12-20 10:33:46] 2025-12-20 09:33:14,782 | INFO     | cat /etc/os-release:
[2025-12-20 10:33:46] NAME="CentOS Linux"
[2025-12-20 10:33:46] VERSION="7 (Core)"
[2025-12-20 10:33:46] ID="centos"
[2025-12-20 10:33:46] ID_LIKE="rhel fedora"
[2025-12-20 10:33:46] VERSION_ID="7"
[2025-12-20 10:33:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-20 10:33:46] ANSI_COLOR="0;31"
[2025-12-20 10:33:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-20 10:33:46] HOME_URL="https://www.centos.org/"
[2025-12-20 10:33:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-20 10:33:46] 
[2025-12-20 10:33:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-20 10:33:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-20 10:33:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-20 10:33:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-20 10:33:46] 
[2025-12-20 10:33:46] 2025-12-20 09:33:14,782 | INFO     | ***************************************
[2025-12-20 10:33:46] 2025-12-20 09:33:15,285 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-20 10:33:46] 2025-12-20 09:33:15,297 | INFO     | sufficient remaining disk space (505381126144 B)
[2025-12-20 10:33:46] 2025-12-20 09:33:15,297 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-20 10:33:46] 2025-12-20 09:33:15,297 | INFO     | current server update state: UPDATING_FINAL
[2025-12-20 10:33:46] 2025-12-20 09:33:15,297 | INFO     | update_server=False
[2025-12-20 10:33:46] 2025-12-20 09:33:15,297 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-20 10:33:46] 2025-12-20 09:33:15,297 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-20 10:33:46] 2025-12-20 09:33:15,298 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-20 10:33:46] 2025-12-20 09:33:15,513 | INFO     | all payload control threads have been joined
[2025-12-20 10:33:46] 2025-12-20 09:33:15,535 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-20 10:33:46] 2025-12-20 09:33:15,535 | INFO     | aborting loop
[2025-12-20 10:33:46] 2025-12-20 09:33:16,013 | INFO     | all data control threads have been joined
[2025-12-20 10:33:46] 2025-12-20 09:33:16,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-20 10:33:46] 2025-12-20 09:33:16,303 | INFO     | [job] retrieve thread has finished
[2025-12-20 10:33:46] 2025-12-20 09:33:16,304 | INFO     | [job] queue monitor thread has finished
[2025-12-20 10:33:46] 2025-12-20 09:33:16,309 | INFO     | [payload] failed_post thread has finished
[2025-12-20 10:33:46] 2025-12-20 09:33:16,519 | INFO     | [payload] control thread has finished
[2025-12-20 10:33:46] 2025-12-20 09:33:16,541 | INFO     | [job] job monitor thread has finished
[2025-12-20 10:33:46] 2025-12-20 09:33:16,542 | INFO     | [data] copytool_in thread has finished
[2025-12-20 10:33:46] 2025-12-20 09:33:16,717 | INFO     | all job control threads have been joined
[2025-12-20 10:33:46] 2025-12-20 09:33:16,831 | INFO     | [payload] validate_post thread has finished
[2025-12-20 10:33:46] 2025-12-20 09:33:17,019 | INFO     | [data] control thread has finished
[2025-12-20 10:33:46] 2025-12-20 09:33:17,159 | INFO     | [job] validate thread has finished
[2025-12-20 10:33:46] 2025-12-20 09:33:17,328 | INFO     | [job] create_data_payload thread has finished
[2025-12-20 10:33:46] 2025-12-20 09:33:17,485 | INFO     | [payload] validate_pre thread has finished
[2025-12-20 10:33:46] 2025-12-20 09:33:17,723 | INFO     | [job] control thread has finished
[2025-12-20 10:33:46] 2025-12-20 09:33:17,752 | INFO     | [payload] execute_payloads thread has finished
[2025-12-20 10:33:46] 2025-12-20 09:33:18,120 | INFO     | [data] copytool_out thread has finished
[2025-12-20 10:33:46] 2025-12-20 09:33:19,304 | INFO     | [data] queue_monitor thread has finished
[2025-12-20 10:33:46] 2025-12-20 09:33:25,693 | INFO     | job.realtimelogging is not enabled
[2025-12-20 10:33:46] 2025-12-20 09:33:26,698 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-20 10:33:46] 2025-12-20 09:33:26,939 | INFO     | [monitor] cgroup control has ended
[2025-12-20 10:33:46] 2025-12-20 09:33:28,017 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139698618521408)>', '<ExcThread(monitor, started 139697888155392)>']
[2025-12-20 10:33:46] 2025-12-20 09:33:33,042 | INFO     | all workflow threads have been joined
[2025-12-20 10:33:46] 2025-12-20 09:33:33,042 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-20 10:33:46] 2025-12-20 09:33:33,042 | INFO     | traces error code: 0
[2025-12-20 10:33:46] 2025-12-20 09:33:33,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-20 10:33:46] 2025-12-20 09:33:46,302 | INFO     | PID=1130641 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-20 10:33:46] 2025-12-20 09:33:46,303 | INFO     | found 0 job(s) in 20 queues
[2025-12-20 10:33:46] 2025-12-20 09:33:46,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-20 10:33:46] 2025-12-20 09:33:46,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-20 10:33:46] 2025-12-20 09:33:46,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-20 10:33:46] 2025-12-20 09:33:46,303 | CRITICAL | thread 'MainThread' is not alive
[2025-12-20 10:33:46] 2025-12-20 09:33:46,303 | INFO     | [monitor] control thread has ended
[2025-12-20 10:33:46] 2025-12-20 09:33:46,341 [wrapper] ==== pilot stdout END ====
[2025-12-20 10:33:46] 2025-12-20 09:33:46,343 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-20 10:33:46] 2025-12-20 09:33:46,345 [wrapper] pilotpid: 1130641
[2025-12-20 10:33:46] 2025-12-20 09:33:46,347 [wrapper] Pilot exit status: 0
[2025-12-20 10:33:46] 2025-12-20 09:33:46,352 [wrapper] pandaids: 6934303805
[2025-12-20 10:33:46] 2025-12-20 09:33:46,365 [wrapper] cleanup supervisor_pilot 1152309 1130642
[2025-12-20 10:33:46] 2025-12-20 09:33:46,367 [wrapper] Test setup, not cleaning
[2025-12-20 10:33:46] 2025-12-20 09:33:46,369 [wrapper] apfmon messages muted
[2025-12-20 10:33:46] 2025-12-20 09:33:46,370 [wrapper] ==== wrapper stdout END ====
[2025-12-20 10:33:46] 2025-12-20 09:33:46,372 [wrapper] ==== wrapper stderr END ====
[2025-12-20 10:33:46]  *** Error codes and diagnostics ***
[2025-12-20 10:33:46]     "exeErrorCode": 0,
[2025-12-20 10:33:46]     "exeErrorDiag": "",
[2025-12-20 10:33:46]     "pilotErrorCode": 0,
[2025-12-20 10:33:46]     "pilotErrorDiag": "",
[2025-12-20 10:33:46]  *** Listing of results directory ***
[2025-12-20 10:33:46] total 437428
[2025-12-20 10:33:46] -rw-r--r-- 1 boinc boinc    579449 Dec 18 21:41 pilot3.tar.gz
[2025-12-20 10:33:46] -rwx------ 1 boinc boinc     36322 Dec 18 21:44 runpilot2-wrapper.sh
[2025-12-20 10:33:46] -rw-r--r-- 1 boinc boinc      5112 Dec 18 21:47 queuedata.json
[2025-12-20 10:33:46] -rw-r--r-- 1 boinc boinc       100 Dec 20 08:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-20 10:33:46] -rwxr-xr-x 1 boinc boinc      7986 Dec 20 08:27 run_atlas
[2025-12-20 10:33:46] -rw-r--r-- 1 boinc boinc       105 Dec 20 08:27 job.xml
[2025-12-20 10:33:46] -rw-r--r-- 2 boinc boinc 252116652 Dec 20 08:27 EVNT.47929390._000020.pool.root.1
[2025-12-20 10:33:46] -rw-r--r-- 2 boinc boinc    592395 Dec 20 08:27 input.tar.gz
[2025-12-20 10:33:46] -rw-r--r-- 2 boinc boinc     15847 Dec 20 08:27 start_atlas.sh
[2025-12-20 10:33:46] drwxrwx--x 2 boinc boinc      4096 Dec 20 08:27 shared
[2025-12-20 10:33:46] -rw-r--r-- 1 boinc boinc         0 Dec 20 08:27 boinc_setup_complete
[2025-12-20 10:33:46] -rw-r--r-- 1 boinc boinc      6208 Dec 20 08:27 init_data.xml
[2025-12-20 10:33:46] -rw-r--r-- 1 boinc boinc         0 Dec 20 08:27 boinc_lockfile
[2025-12-20 10:33:46] -rw-r--r-- 1 boinc boinc      2549 Dec 20 08:27 pandaJob.out
[2025-12-20 10:33:46] -rw------- 1 boinc boinc    988146 Dec 20 08:27 agis_schedconf.cvmfs.json
[2025-12-20 10:33:46] -rw------- 1 boinc boinc   1516240 Dec 20 08:27 agis_ddmendpoints.agis.ALL.json
[2025-12-20 10:33:46] drwx------ 5 boinc boinc      4096 Dec 20 08:27 pilot3
[2025-12-20 10:33:46] -rw-r--r-- 1 boinc boinc       530 Dec 20 10:32 boinc_task_state.xml
[2025-12-20 10:33:46] -rw------- 1 boinc boinc 189156080 Dec 20 10:32 HITS.47929392._000398.pool.root.1
[2025-12-20 10:33:46] -rw------- 1 boinc boinc        95 Dec 20 10:32 pilot_heartbeat.json
[2025-12-20 10:33:46] -rw------- 1 boinc boinc      1017 Dec 20 10:33 memory_monitor_summary.json
[2025-12-20 10:33:46] -rw------- 1 boinc boinc    288074 Dec 20 10:33 log.47929392._000398.job.log.tgz.1
[2025-12-20 10:33:46] -rw------- 1 boinc boinc      7757 Dec 20 10:33 heartbeat.json
[2025-12-20 10:33:46] -rw-r--r-- 1 boinc boinc      8192 Dec 20 10:33 boinc_mmap_file
[2025-12-20 10:33:46] -rw-r--r-- 1 boinc boinc        27 Dec 20 10:33 wrapper_checkpoint.txt
[2025-12-20 10:33:46] -rw------- 1 boinc boinc       817 Dec 20 10:33 pilotlog.txt
[2025-12-20 10:33:46] -rw------- 1 boinc boinc   1088031 Dec 20 10:33 log.47929392._000398.job.log.1
[2025-12-20 10:33:46] -rw------- 1 boinc boinc       357 Dec 20 10:33 output.list
[2025-12-20 10:33:46] -rw-r--r-- 1 boinc boinc       620 Dec 20 10:33 runtime_log
[2025-12-20 10:33:46] -rw------- 1 boinc boinc   1392640 Dec 20 10:33 result.tar.gz
[2025-12-20 10:33:46] -rw-r--r-- 1 boinc boinc      8917 Dec 20 10:33 runtime_log.err
[2025-12-20 10:33:46] -rw------- 1 boinc boinc       663 Dec 20 10:33 AVnNDma2Zq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmA8ZKDmp9r8um.diag
[2025-12-20 10:33:46] -rw-r--r-- 1 boinc boinc     21387 Dec 20 10:33 stderr.txt
[2025-12-20 10:33:46] HITS file was successfully produced:
[2025-12-20 10:33:46] -rw------- 1 boinc boinc 189156080 Dec 20 10:32 shared/HITS.pool.root.1
[2025-12-20 10:33:46]  *** Contents of shared directory: ***
[2025-12-20 10:33:46] total 432892
[2025-12-20 10:33:46] -rw-r--r-- 2 boinc boinc 252116652 Dec 20 08:27 ATLAS.root_0
[2025-12-20 10:33:46] -rw-r--r-- 2 boinc boinc    592395 Dec 20 08:27 input.tar.gz
[2025-12-20 10:33:46] -rw-r--r-- 2 boinc boinc     15847 Dec 20 08:27 start_atlas.sh
[2025-12-20 10:33:46] -rw------- 1 boinc boinc 189156080 Dec 20 10:32 HITS.pool.root.1
[2025-12-20 10:33:46] -rw------- 1 boinc boinc   1392640 Dec 20 10:33 result.tar.gz
10:33:47 (1126930): run_atlas exited; CPU time 14765.737645
10:33:47 (1126930): called boinc_finish(0)

</stderr_txt>
]]>

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