Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:35:04 (2532560): wrapper (7.7.26015): starting
11:35:04 (2532560): wrapper: running run_atlas (--nthreads 2)
[2025-12-19 11:35:04] Arguments: --nthreads 2
[2025-12-19 11:35:04] Threads: 2
[2025-12-19 11:35:04] Checking for CVMFS
[2025-12-19 11:35:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 11:35:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 11:35:04] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 11:35:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 11:35:04] 2.9.2.0 769479 8742 62288 154185 0 57 36584271 36864000 0 130560 0 4666548 99.987 318492 9843 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-19 11:35:04] CVMFS is ok
[2025-12-19 11:35:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-19 11:35:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-19 11:35:04] Further information can be found at the LHC@home message board.
[2025-12-19 11:35:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 11:35:04] Checking for apptainer binary...
[2025-12-19 11:35:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 11:35:04] Running /usr/bin/apptainer --version
[2025-12-19 11:35:04] apptainer version 1.4.1-1.1
[2025-12-19 11:35:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 11:35:04] thA337
[2025-12-19 11:35:04] apptainer works
[2025-12-19 11:35:04] Set ATHENA_PROC_NUMBER=2
[2025-12-19 11:35:04] Set ATHENA_CORE_NUMBER=2
[2025-12-19 11:35:04] Starting ATLAS job with PandaID=6934303081
[2025-12-19 11:35:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 13:35:38]  *** The last 200 lines of the pilot log: ***
[2025-12-19 13:35:38] 2025-12-19 12:35:07,709 | INFO     | all data control threads have been joined
[2025-12-19 13:35:38] 2025-12-19 12:35:08,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 13:35:38] 2025-12-19 12:35:08,511 | INFO     | [job] retrieve thread has finished
[2025-12-19 13:35:38] 2025-12-19 12:35:08,511 | INFO     | [job] queue monitor thread has finished
[2025-12-19 13:35:38] 2025-12-19 12:35:08,595 | INFO     | [data] copytool_in thread has finished
[2025-12-19 13:35:38] 2025-12-19 12:35:08,669 | INFO     | [job] job monitor thread has finished
[2025-12-19 13:35:38] 2025-12-19 12:35:08,686 | INFO     | [payload] control thread has finished
[2025-12-19 13:35:38] 2025-12-19 12:35:08,701 | INFO     | [payload] validate_post thread has finished
[2025-12-19 13:35:38] 2025-12-19 12:35:08,715 | INFO     | [data] control thread has finished
[2025-12-19 13:35:38] 2025-12-19 12:35:09,117 | INFO     | all job control threads have been joined
[2025-12-19 13:35:38] 2025-12-19 12:35:09,129 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 13:35:38] 2025-12-19 12:35:09,395 | INFO     | [payload] failed_post thread has finished
[2025-12-19 13:35:38] 2025-12-19 12:35:09,475 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 13:35:38] 2025-12-19 12:35:09,604 | INFO     | [job] validate thread has finished
[2025-12-19 13:35:38] 2025-12-19 12:35:09,739 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 13:35:38] 2025-12-19 12:35:09,769 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 13:35:38] 2025-12-19 12:35:10,123 | INFO     | [job] control thread has finished
[2025-12-19 13:35:38] 2025-12-19 12:35:10,330 | INFO     | [data] copytool_out thread has finished
[2025-12-19 13:35:38] 2025-12-19 12:35:13,136 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 13:35:38] 2025-12-19 12:35:17,696 [wrapper] supervise_pilot (15 min periods counter: 9)
[2025-12-19 13:35:38] 2025-12-19 12:35:18,314 | INFO     | job.realtimelogging is not enabled
[2025-12-19 13:35:38] 2025-12-19 12:35:19,320 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 13:35:38] 2025-12-19 12:35:29,203 | INFO     | [monitor] cgroup control has ended
[2025-12-19 13:35:38] 2025-12-19 12:35:29,248 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140351016068928)>', '<ExcThread(monitor, started 140349934663424)>']
[2025-12-19 13:35:38] 2025-12-19 12:35:34,274 | INFO     | all workflow threads have been joined
[2025-12-19 13:35:38] 2025-12-19 12:35:34,275 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 13:35:38] 2025-12-19 12:35:34,275 | INFO     | traces error code: 0
[2025-12-19 13:35:38] 2025-12-19 12:35:34,276 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 13:35:38] 2025-12-19 12:35:38,482 | INFO     | PID=2536263 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-19 13:35:38] 2025-12-19 12:35:38,482 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 13:35:38] 2025-12-19 12:35:38,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 13:35:38] 2025-12-19 12:35:38,483 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 13:35:38] 2025-12-19 12:35:38,483 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 13:35:38] 2025-12-19 12:35:38,483 | INFO     | [monitor] control thread has ended
[2025-12-19 13:35:38] 2025-12-19 12:35:38,520 [wrapper] ==== pilot stdout END ====
[2025-12-19 13:35:38] 2025-12-19 12:35:38,523 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 13:35:38] 2025-12-19 12:35:38,526 [wrapper] pilotpid: 2536263
[2025-12-19 13:35:38] 2025-12-19 12:35:38,528 [wrapper] Pilot exit status: 0
[2025-12-19 13:35:38] 2025-12-19 12:35:38,534 [wrapper] pandaids: 6934303081
[2025-12-19 13:35:38] 2025-12-19 12:35:38,545 [wrapper] cleanup supervisor_pilot 2559018 2536264
[2025-12-19 13:35:38] 2025-12-19 12:35:38,547 [wrapper] Test setup, not cleaning
[2025-12-19 13:35:38] 2025-12-19 12:35:38,549 [wrapper] apfmon messages muted
[2025-12-19 13:35:38] 2025-12-19 12:35:38,551 [wrapper] ==== wrapper stdout END ====
[2025-12-19 13:35:38] 2025-12-19 12:35:38,553 [wrapper] ==== wrapper stderr END ====
[2025-12-19 13:35:38]  *** Error codes and diagnostics ***
[2025-12-19 13:35:38]     "exeErrorCode": 0,
[2025-12-19 13:35:38]     "exeErrorDiag": "",
[2025-12-19 13:35:38]     "pilotErrorCode": 0,
[2025-12-19 13:35:38]     "pilotErrorDiag": "",
[2025-12-19 13:35:38]  *** Listing of results directory ***
[2025-12-19 13:35:38] total 428892
[2025-12-19 13:35:38] -rw-r--r-- 1 boinc boinc    579449 Dec 18 21:41 pilot3.tar.gz
[2025-12-19 13:35:38] -rwx------ 1 boinc boinc     36322 Dec 18 21:41 runpilot2-wrapper.sh
[2025-12-19 13:35:38] -rw-r--r-- 1 boinc boinc      5112 Dec 18 21:42 queuedata.json
[2025-12-19 13:35:38] -rw-r--r-- 1 boinc boinc       100 Dec 19 11:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 13:35:38] -rwxr-xr-x 1 boinc boinc      7986 Dec 19 11:35 run_atlas
[2025-12-19 13:35:38] -rw-r--r-- 1 boinc boinc       105 Dec 19 11:35 job.xml
[2025-12-19 13:35:38] -rw-r--r-- 2 boinc boinc 252833636 Dec 19 11:35 EVNT.47929406._000016.pool.root.1
[2025-12-19 13:35:38] -rw-r--r-- 2 boinc boinc    592420 Dec 19 11:35 input.tar.gz
[2025-12-19 13:35:38] -rw-r--r-- 2 boinc boinc     15847 Dec 19 11:35 start_atlas.sh
[2025-12-19 13:35:38] drwxrwx--x 2 boinc boinc      4096 Dec 19 11:35 shared
[2025-12-19 13:35:38] -rw-r--r-- 1 boinc boinc         0 Dec 19 11:35 boinc_setup_complete
[2025-12-19 13:35:38] -rw-r--r-- 1 boinc boinc      6206 Dec 19 11:35 init_data.xml
[2025-12-19 13:35:38] -rw-r--r-- 1 boinc boinc         0 Dec 19 11:35 boinc_lockfile
[2025-12-19 13:35:38] -rw-r--r-- 1 boinc boinc      2573 Dec 19 11:35 pandaJob.out
[2025-12-19 13:35:38] -rw------- 1 boinc boinc    988887 Dec 19 11:35 agis_schedconf.cvmfs.json
[2025-12-19 13:35:38] -rw------- 1 boinc boinc   1516240 Dec 19 11:35 agis_ddmendpoints.agis.ALL.json
[2025-12-19 13:35:38] drwx------ 5 boinc boinc      4096 Dec 19 11:35 pilot3
[2025-12-19 13:35:38] -rw------- 1 boinc boinc 179878840 Dec 19 13:34 HITS.47929408._000580.pool.root.1
[2025-12-19 13:35:38] -rw-r--r-- 1 boinc boinc       529 Dec 19 13:34 boinc_task_state.xml
[2025-12-19 13:35:38] -rw------- 1 boinc boinc        95 Dec 19 13:34 pilot_heartbeat.json
[2025-12-19 13:35:38] -rw------- 1 boinc boinc      1016 Dec 19 13:34 memory_monitor_summary.json
[2025-12-19 13:35:38] -rw------- 1 boinc boinc    260415 Dec 19 13:34 log.47929408._000580.job.log.tgz.1
[2025-12-19 13:35:38] -rw------- 1 boinc boinc      7746 Dec 19 13:35 heartbeat.json
[2025-12-19 13:35:38] -rw-r--r-- 1 boinc boinc      8192 Dec 19 13:35 boinc_mmap_file
[2025-12-19 13:35:38] -rw-r--r-- 1 boinc boinc        27 Dec 19 13:35 wrapper_checkpoint.txt
[2025-12-19 13:35:38] -rw------- 1 boinc boinc       747 Dec 19 13:35 pilotlog.txt
[2025-12-19 13:35:38] -rw------- 1 boinc boinc   1035932 Dec 19 13:35 log.47929408._000580.job.log.1
[2025-12-19 13:35:38] -rw------- 1 boinc boinc       357 Dec 19 13:35 output.list
[2025-12-19 13:35:38] -rw-r--r-- 1 boinc boinc       620 Dec 19 13:35 runtime_log
[2025-12-19 13:35:38] -rw------- 1 boinc boinc   1310720 Dec 19 13:35 result.tar.gz
[2025-12-19 13:35:38] -rw-r--r-- 1 boinc boinc      8897 Dec 19 13:35 runtime_log.err
[2025-12-19 13:35:38] -rw------- 1 boinc boinc       659 Dec 19 13:35 erKMDmuzZq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDml1ZKDmvA1kbm.diag
[2025-12-19 13:35:38] -rw-r--r-- 1 boinc boinc      6955 Dec 19 13:35 stderr.txt
[2025-12-19 13:35:38] HITS file was successfully produced:
[2025-12-19 13:35:38] -rw------- 1 boinc boinc 179878840 Dec 19 13:34 shared/HITS.pool.root.1
[2025-12-19 13:35:38]  *** Contents of shared directory: ***
[2025-12-19 13:35:38] total 424452
[2025-12-19 13:35:38] -rw-r--r-- 2 boinc boinc 252833636 Dec 19 11:35 ATLAS.root_0
[2025-12-19 13:35:38] -rw-r--r-- 2 boinc boinc    592420 Dec 19 11:35 input.tar.gz
[2025-12-19 13:35:38] -rw-r--r-- 2 boinc boinc     15847 Dec 19 11:35 start_atlas.sh
[2025-12-19 13:35:38] -rw------- 1 boinc boinc 179878840 Dec 19 13:34 HITS.pool.root.1
[2025-12-19 13:35:38] -rw------- 1 boinc boinc   1310720 Dec 19 13:35 result.tar.gz
13:35:40 (2532560): run_atlas exited; CPU time 13962.359142
13:35:40 (2532560): called boinc_finish(0)

</stderr_txt>
]]>

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