Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:21:39 (980583): wrapper (7.7.26015): starting
13:21:39 (980583): wrapper: running run_atlas (--nthreads 2)
[2025-12-19 13:21:39] Arguments: --nthreads 2
[2025-12-19 13:21:39] Threads: 2
[2025-12-19 13:21:39] Checking for CVMFS
[2025-12-19 13:21:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 13:21:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 13:21:39] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 13:21:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 13:21:39] 2.9.2.0 2364742 9130 58708 154187 1 57 36789545 36864000 0 130560 0 4691365 99.987 331701 20087 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-19 13:21:39] CVMFS is ok
[2025-12-19 13:21:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-19 13:21:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-19 13:21:39] Further information can be found at the LHC@home message board.
[2025-12-19 13:21:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 13:21:39] Checking for apptainer binary...
[2025-12-19 13:21:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 13:21:39] Running /usr/bin/apptainer --version
[2025-12-19 13:21:39] apptainer version 1.4.1-1.1
[2025-12-19 13:21:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 13:21:39] belleA253d
[2025-12-19 13:21:39] apptainer works
[2025-12-19 13:21:39] Set ATHENA_PROC_NUMBER=2
[2025-12-19 13:21:39] Set ATHENA_CORE_NUMBER=2
[2025-12-19 13:21:39] Starting ATLAS job with PandaID=6934701610
[2025-12-19 13:21:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-20 05:28:41]  *** The last 200 lines of the pilot log: ***
[2025-12-20 05:28:41] 2025-12-20 04:28:06,494 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-20 05:28:41] 2025-12-20 04:28:08,103 | INFO     | time since job start (57981s) is within the limit (174528.0s)
[2025-12-20 05:28:41] 2025-12-20 04:28:08,739 | INFO     | monitor loop #4415: job 0:6934701610 is in state 'finished'
[2025-12-20 05:28:41] 2025-12-20 04:28:08,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-20 05:28:41] 2025-12-20 04:28:08,927 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-20 05:28:41] 2025-12-20 04:28:08,928 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 4565.209875
[2025-12-20 05:28:41] 2025-12-20 04:28:08,929 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6934701610/memory_monitor_summary.json (trf name=prmon)
[2025-12-20 05:28:41] 2025-12-20 04:28:08,929 | INFO     | extracted standard info from prmon json
[2025-12-20 05:28:41] 2025-12-20 04:28:08,929 | INFO     | extracted standard memory fields from prmon json
[2025-12-20 05:28:41] 2025-12-20 04:28:08,929 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-20 05:28:41] 2025-12-20 04:28:08,934 | INFO     | fitting pss+swap vs Time
[2025-12-20 05:28:41] 2025-12-20 04:28:08,934 | INFO     | sum of square deviations: 266697837700.0
[2025-12-20 05:28:41] 2025-12-20 04:28:08,942 | INFO     | sum of deviations: 464476971257.99994
[2025-12-20 05:28:41] 2025-12-20 04:28:08,942 | INFO     | mean x: 1766175901.0
[2025-12-20 05:28:41] 2025-12-20 04:28:08,942 | INFO     | mean y: 2023822.4994742377
[2025-12-20 05:28:41] 2025-12-20 04:28:08,942 | INFO     | intersect: -3073921750.5131307
[2025-12-20 05:28:41] 2025-12-20 04:28:08,942 | INFO     | chi2: 4.024503681763573
[2025-12-20 05:28:41] 2025-12-20 04:28:08,943 | INFO     | sum of square deviations: 262513322032.5
[2025-12-20 05:28:41] 2025-12-20 04:28:08,950 | INFO     | sum of deviations: 597865382056.9999
[2025-12-20 05:28:41] 2025-12-20 04:28:08,950 | INFO     | mean x: 1766175748.5
[2025-12-20 05:28:41] 2025-12-20 04:28:08,950 | INFO     | mean y: 2028674.3488372094
[2025-12-20 05:28:41] 2025-12-20 04:28:08,950 | INFO     | intersect: -4020378000.0295095
[2025-12-20 05:28:41] 2025-12-20 04:28:08,951 | INFO     | chi2: 2.4327167416068014
[2025-12-20 05:28:41] 2025-12-20 04:28:08,951 | INFO     | current chi2=2.4327167416068014 (change=39.5523787782755 %)
[2025-12-20 05:28:41] 2025-12-20 04:28:08,951 | INFO     | sum of square deviations: 258372807190.0
[2025-12-20 05:28:41] 2025-12-20 04:28:08,959 | INFO     | sum of deviations: 598434689139.9999
[2025-12-20 05:28:41] 2025-12-20 04:28:08,959 | INFO     | mean x: 1766175596.0
[2025-12-20 05:28:41] 2025-12-20 04:28:08,959 | INFO     | mean y: 2028694.3868225291
[2025-12-20 05:28:41] 2025-12-20 04:28:08,959 | INFO     | intersect: -4088729753.663285
[2025-12-20 05:28:41] 2025-12-20 04:28:08,959 | INFO     | chi2: 2.4210010785167935
[2025-12-20 05:28:41] 2025-12-20 04:28:08,959 | INFO     | current chi2=2.4210010785167935 (change=0.4815876377892552 %)
[2025-12-20 05:28:41] 2025-12-20 04:28:08,959 | INFO     | right removable region: 940
[2025-12-20 05:28:41] 2025-12-20 04:28:08,959 | INFO     | sum of square deviations: 262513322032.5
[2025-12-20 05:28:41] 2025-12-20 04:28:08,967 | INFO     | sum of deviations: 284527918954.0001
[2025-12-20 05:28:41] 2025-12-20 04:28:08,967 | INFO     | mean x: 1766176053.5
[2025-12-20 05:28:41] 2025-12-20 04:28:08,967 | INFO     | mean y: 2030375.3995771671
[2025-12-20 05:28:41] 2025-12-20 04:28:08,967 | INFO     | intersect: -1912258747.5978813
[2025-12-20 05:28:41] 2025-12-20 04:28:08,967 | INFO     | chi2: 1.9804406102299128
[2025-12-20 05:28:41] 2025-12-20 04:28:08,967 | INFO     | current chi2=1.9804406102299128 (change=50.79043860230571 %)
[2025-12-20 05:28:41] 2025-12-20 04:28:08,968 | INFO     | sum of square deviations: 258372807190.0
[2025-12-20 05:28:41] 2025-12-20 04:28:08,975 | INFO     | sum of deviations: 231059365267.0
[2025-12-20 05:28:41] 2025-12-20 04:28:08,975 | INFO     | mean x: 1766176206.0
[2025-12-20 05:28:41] 2025-12-20 04:28:08,975 | INFO     | mean y: 2032339.659936238
[2025-12-20 05:28:41] 2025-12-20 04:28:08,975 | INFO     | intersect: -1577435552.284046
[2025-12-20 05:28:41] 2025-12-20 04:28:08,976 | INFO     | chi2: 1.6872869192377533
[2025-12-20 05:28:41] 2025-12-20 04:28:08,976 | INFO     | current chi2=1.6872869192377533 (change=14.802447974348837 %)
[2025-12-20 05:28:41] 2025-12-20 04:28:08,976 | INFO     | left removable region: 20
[2025-12-20 05:28:41] 2025-12-20 04:28:08,976 | INFO     | sum of square deviations: 241457885390.0
[2025-12-20 05:28:41] 2025-12-20 04:28:08,983 | INFO     | sum of deviations: 351178161226.5
[2025-12-20 05:28:41] 2025-12-20 04:28:08,983 | INFO     | mean x: 1766176175.5
[2025-12-20 05:28:41] 2025-12-20 04:28:08,983 | INFO     | mean y: 2037885.372826087
[2025-12-20 05:28:41] 2025-12-20 04:28:08,983 | INFO     | intersect: -2566702003.6241045
[2025-12-20 05:28:41] 2025-12-20 04:28:08,984 | INFO     | chi2: 0.0747172766717754
[2025-12-20 05:28:41] 2025-12-20 04:28:08,984 | INFO     | current memory leak: 1.45 B/s (using 920 data points, chi2=0.07)
[2025-12-20 05:28:41] 2025-12-20 04:28:08,984 | INFO     | could have reported an average CPU frequency of 4582 MHz (35 samples)
[2025-12-20 05:28:41] 2025-12-20 04:28:08,984 | INFO     | ..............................
[2025-12-20 05:28:41] 2025-12-20 04:28:08,984 | INFO     | . Timing measurements:
[2025-12-20 05:28:41] 2025-12-20 04:28:08,984 | INFO     | . get job = 0 s
[2025-12-20 05:28:41] 2025-12-20 04:28:08,984 | INFO     | . initial setup = 1 s
[2025-12-20 05:28:41] 2025-12-20 04:28:08,984 | INFO     | . payload setup = 2 s
[2025-12-20 05:28:41] 2025-12-20 04:28:08,984 | INFO     | . stage-in = 0 s
[2025-12-20 05:28:41] 2025-12-20 04:28:08,984 | INFO     | . payload execution = 57956 s
[2025-12-20 05:28:41] 2025-12-20 04:28:08,984 | INFO     | . stage-out = 1 s
[2025-12-20 05:28:41] 2025-12-20 04:28:08,984 | INFO     | . log creation = 0 s
[2025-12-20 05:28:41] 2025-12-20 04:28:08,984 | INFO     | ..............................
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | 
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | job summary report
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | --------------------------------------------------
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | PanDA job id: 6934701610
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | task id: 47960988
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | errors: (none)
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | pilot state: finished 
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | transexitcode: 0
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | exeerrorcode: 0
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | exeerrordiag: 
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | exitcode: 0
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | exitmsg: OK
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | cpuconsumptiontime: 114982 s
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | nevents: 1000
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | neventsw: 0
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | pid: 990715
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | pgrp: 990715
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | corecount: 2
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | event service: False
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | sizes: {0: 2284429, 1: 2284628, 3: 2284890, 11: 2284918, 57963: 2337536, 57964: 2346536, 57966: 2346720, 57968: 2346966}
[2025-12-20 05:28:41] 2025-12-20 04:28:09,013 | INFO     | --------------------------------------------------
[2025-12-20 05:28:41] 2025-12-20 04:28:09,014 | INFO     | 
[2025-12-20 05:28:41] 2025-12-20 04:28:09,014 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-20 05:28:41] 2025-12-20 04:28:09,024 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-20 05:28:41] 2025-12-20 04:28:09,024 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-20 05:28:41] 2025-12-20 04:28:09,024 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-20 05:28:41] 2025-12-20 04:28:09,024 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-20 05:28:41] 2025-12-20 04:28:09,024 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-20 05:28:41] 2025-12-20 04:28:09,025 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-20 05:28:41] 2025-12-20 04:28:09,025 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-20 05:28:41] 2025-12-20 04:28:09,025 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-20 05:28:41] 2025-12-20 04:28:09,025 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-20 05:28:41] 2025-12-20 04:28:09,025 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-20 05:28:41] 2025-12-20 04:28:09,025 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-20 05:28:41] 2025-12-20 04:28:09,025 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-20 05:28:41] 2025-12-20 04:28:09,025 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-20 05:28:41] 2025-12-20 04:28:09,025 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-20 05:28:41] 2025-12-20 04:28:09,025 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-20 05:28:41] 2025-12-20 04:28:09,025 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-20 05:28:41] 2025-12-20 04:28:09,025 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-20 05:28:41] 2025-12-20 04:28:09,025 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-20 05:28:41] 2025-12-20 04:28:09,025 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-20 05:28:41] 2025-12-20 04:28:09,025 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-20 05:28:41] 2025-12-20 04:28:09,025 | INFO     | job 6934701610 has completed (purged errors)
[2025-12-20 05:28:41] 2025-12-20 04:28:09,025 | INFO     | overall cleanup function is called
[2025-12-20 05:28:41] 2025-12-20 04:28:10,029 | INFO     | --- collectZombieJob: --- 10, [990715]
[2025-12-20 05:28:41] 2025-12-20 04:28:10,029 | INFO     | zombie collector waiting for pid 990715
[2025-12-20 05:28:41] 2025-12-20 04:28:10,029 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-20 05:28:41] 2025-12-20 04:28:10,029 | INFO     | collected zombie processes
[2025-12-20 05:28:41] 2025-12-20 04:28:10,029 | INFO     | will attempt to kill all subprocesses of pid=990715
[2025-12-20 05:28:41] 2025-12-20 04:28:10,064 | INFO     | process IDs to be killed: [990715] (in reverse order)
[2025-12-20 05:28:41] 2025-12-20 04:28:10,084 | WARNING  | found no corresponding commands to process id(s)
[2025-12-20 05:28:41] 2025-12-20 04:28:10,084 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-20 05:28:41] 2025-12-20 04:28:10,085 | INFO     | did not find any defunct processes belonging to 990715
[2025-12-20 05:28:41] 2025-12-20 04:28:10,086 | INFO     | did not find any defunct processes belonging to 990715
[2025-12-20 05:28:41] 2025-12-20 04:28:10,086 | INFO     | ready for new job
[2025-12-20 05:28:41] 2025-12-20 04:28:10,086 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-20 05:28:41] 2025-12-20 04:28:10,087 | INFO     | ***************************************
[2025-12-20 05:28:41] 2025-12-20 04:28:10,087 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-20 05:28:41] 2025-12-20 04:28:10,087 | INFO     | ***************************************
[2025-12-20 05:28:41] 2025-12-20 04:28:10,087 | INFO     | 
[2025-12-20 05:28:41] 2025-12-20 04:28:10,087 | INFO     | architecture information:
[2025-12-20 05:28:41] 2025-12-20 04:28:10,088 | INFO     | executing command: cat /etc/os-release
[2025-12-20 05:28:41] 2025-12-20 04:28:10,096 | INFO     | cat /etc/os-release:
[2025-12-20 05:28:41] NAME="CentOS Linux"
[2025-12-20 05:28:41] VERSION="7 (Core)"
[2025-12-20 05:28:41] ID="centos"
[2025-12-20 05:28:41] ID_LIKE="rhel fedora"
[2025-12-20 05:28:41] VERSION_ID="7"
[2025-12-20 05:28:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-20 05:28:41] ANSI_COLOR="0;31"
[2025-12-20 05:28:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-20 05:28:41] HOME_URL="https://www.centos.org/"
[2025-12-20 05:28:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-20 05:28:41] 
[2025-12-20 05:28:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-20 05:28:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-20 05:28:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-20 05:28:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-20 05:28:41] 
[2025-12-20 05:28:41] 2025-12-20 04:28:10,096 | INFO     | ***************************************
[2025-12-20 05:28:41] 2025-12-20 04:28:10,598 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-20 05:28:41] 2025-12-20 04:28:10,607 | INFO     | sufficient remaining disk space (504205672448 B)
[2025-12-20 05:28:41] 2025-12-20 04:28:10,607 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-20 05:28:41] 2025-12-20 04:28:10,607 | INFO     | current server update state: UPDATING_FINAL
[2025-12-20 05:28:41] 2025-12-20 04:28:10,607 | INFO     | update_server=False
[2025-12-20 05:28:41] 2025-12-20 04:28:10,607 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-20 05:28:41] 2025-12-20 04:28:10,607 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-20 05:28:41] 2025-12-20 04:28:10,607 | INFO     | aborting loop
[2025-12-20 05:28:41] 2025-12-20 04:28:10,607 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-20 05:28:41] 2025-12-20 04:28:10,607 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-20 05:28:41] 2025-12-20 04:28:10,761 | INFO     | all job control threads have been joined
[2025-12-20 05:28:41] 2025-12-20 04:28:10,948 | INFO     | all payload control threads have been joined
[2025-12-20 05:28:41] 2025-12-20 04:28:11,612 | INFO     | [job] retrieve thread has finished
[2025-12-20 05:28:41] 2025-12-20 04:28:11,612 | INFO     | [job] job monitor thread has finished
[2025-12-20 05:28:41] 2025-12-20 04:28:11,613 | INFO     | [job] queue monitor thread has finished
[2025-12-20 05:28:41] 2025-12-20 04:28:11,624 | INFO     | all data control threads have been joined
[2025-12-20 05:28:41] 2025-12-20 04:28:11,709 | INFO     | [monitor] cgroup control has ended
[2025-12-20 05:28:41] 2025-12-20 04:28:11,766 | INFO     | [job] control thread has finished
[2025-12-20 05:28:41] 2025-12-20 04:28:11,953 | INFO     | [payload] control thread has finished
[2025-12-20 05:28:41] 2025-12-20 04:28:12,137 | INFO     | [payload] validate_post thread has finished
[2025-12-20 05:28:41] 2025-12-20 04:28:12,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-20 05:28:41] 2025-12-20 04:28:12,314 | INFO     | [job] validate thread has finished
[2025-12-20 05:28:41] 2025-12-20 04:28:12,382 | INFO     | [job] create_data_payload thread has finished
[2025-12-20 05:28:41] 2025-12-20 04:28:12,397 | INFO     | [payload] validate_pre thread has finished
[2025-12-20 05:28:41] 2025-12-20 04:28:12,613 | INFO     | [data] copytool_out thread has finished
[2025-12-20 05:28:41] 2025-12-20 04:28:12,628 | INFO     | [data] control thread has finished
[2025-12-20 05:28:41] 2025-12-20 04:28:12,966 | INFO     | [payload] failed_post thread has finished
[2025-12-20 05:28:41] 2025-12-20 04:28:12,984 | INFO     | [data] copytool_in thread has finished
[2025-12-20 05:28:41] 2025-12-20 04:28:13,113 | INFO     | [payload] execute_payloads thread has finished
[2025-12-20 05:28:41] 2025-12-20 04:28:16,155 | INFO     | [data] queue_monitor thread has finished
[2025-12-20 05:28:41] 2025-12-20 04:28:21,558 | INFO     | job.realtimelogging is not enabled
[2025-12-20 05:28:41] 2025-12-20 04:28:22,564 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-20 05:28:41] 2025-12-20 04:28:23,482 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140018618292032)>', '<ExcThread(monitor, started 140017989043968)>']
[2025-12-20 05:28:41] 2025-12-20 04:28:28,507 | INFO     | all workflow threads have been joined
[2025-12-20 05:28:41] 2025-12-20 04:28:28,507 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-20 05:28:41] 2025-12-20 04:28:28,507 | INFO     | traces error code: 0
[2025-12-20 05:28:41] 2025-12-20 04:28:28,507 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-20 05:28:41] 2025-12-20 04:28:41,212 | INFO     | PID=984292 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-20 05:28:41] 2025-12-20 04:28:41,213 | INFO     | found 0 job(s) in 20 queues
[2025-12-20 05:28:41] 2025-12-20 04:28:41,213 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-20 05:28:41] 2025-12-20 04:28:41,213 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-20 05:28:41] 2025-12-20 04:28:41,213 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-20 05:28:41] 2025-12-20 04:28:41,213 | INFO     | [monitor] control thread has ended
[2025-12-20 05:28:41] 2025-12-20 04:28:41,252 [wrapper] ==== pilot stdout END ====
[2025-12-20 05:28:41] 2025-12-20 04:28:41,255 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-20 05:28:41] 2025-12-20 04:28:41,257 [wrapper] pilotpid: 984292
[2025-12-20 05:28:41] 2025-12-20 04:28:41,258 [wrapper] Pilot exit status: 0
[2025-12-20 05:28:41] 2025-12-20 04:28:41,264 [wrapper] pandaids: 6934701610
[2025-12-20 05:28:41] 2025-12-20 04:28:41,276 [wrapper] cleanup supervisor_pilot 1090918 984293
[2025-12-20 05:28:41] 2025-12-20 04:28:41,278 [wrapper] Test setup, not cleaning
[2025-12-20 05:28:41] 2025-12-20 04:28:41,280 [wrapper] apfmon messages muted
[2025-12-20 05:28:41] 2025-12-20 04:28:41,282 [wrapper] ==== wrapper stdout END ====
[2025-12-20 05:28:41] 2025-12-20 04:28:41,284 [wrapper] ==== wrapper stderr END ====
[2025-12-20 05:28:41]  *** Error codes and diagnostics ***
[2025-12-20 05:28:41]     "exeErrorCode": 0,
[2025-12-20 05:28:41]     "exeErrorDiag": "",
[2025-12-20 05:28:41]     "pilotErrorCode": 0,
[2025-12-20 05:28:41]     "pilotErrorDiag": "",
[2025-12-20 05:28:41]  *** Listing of results directory ***
[2025-12-20 05:28:41] total 1392216
[2025-12-20 05:28:41] -rw-r--r-- 1 boinc boinc    579449 Dec 19 03:02 pilot3.tar.gz
[2025-12-20 05:28:41] -rwx------ 1 boinc boinc     36322 Dec 19 03:04 runpilot2-wrapper.sh
[2025-12-20 05:28:41] -rw-r--r-- 1 boinc boinc      5112 Dec 19 03:04 queuedata.json
[2025-12-20 05:28:41] -rw-r--r-- 1 boinc boinc       100 Dec 19 13:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-20 05:28:41] -rwxr-xr-x 1 boinc boinc      7986 Dec 19 13:21 run_atlas
[2025-12-20 05:28:41] -rw-r--r-- 1 boinc boinc       105 Dec 19 13:21 job.xml
[2025-12-20 05:28:41] -rw-r--r-- 2 boinc boinc 414226712 Dec 19 13:21 EVNT.47960986._000008.pool.root.1
[2025-12-20 05:28:41] -rw-r--r-- 2 boinc boinc    592595 Dec 19 13:21 input.tar.gz
[2025-12-20 05:28:41] -rw-r--r-- 2 boinc boinc     15847 Dec 19 13:21 start_atlas.sh
[2025-12-20 05:28:41] drwxrwx--x 2 boinc boinc      4096 Dec 19 13:21 shared
[2025-12-20 05:28:41] -rw-r--r-- 1 boinc boinc         0 Dec 19 13:21 boinc_setup_complete
[2025-12-20 05:28:41] -rw-r--r-- 1 boinc boinc      6208 Dec 19 13:21 init_data.xml
[2025-12-20 05:28:41] -rw-r--r-- 1 boinc boinc         0 Dec 19 13:21 boinc_lockfile
[2025-12-20 05:28:41] -rw-r--r-- 1 boinc boinc      2875 Dec 19 13:21 pandaJob.out
[2025-12-20 05:28:41] -rw------- 1 boinc boinc    988895 Dec 19 13:21 agis_schedconf.cvmfs.json
[2025-12-20 05:28:41] drwx------ 5 boinc boinc      4096 Dec 19 13:21 pilot3
[2025-12-20 05:28:41] -rw-r--r-- 1 boinc boinc       533 Dec 20 05:22 boinc_task_state.xml
[2025-12-20 05:28:41] -rw------- 1 boinc boinc 988503053 Dec 20 05:27 HITS.47960988._000057.pool.root.1
[2025-12-20 05:28:41] -rw------- 1 boinc boinc      1022 Dec 20 05:28 memory_monitor_summary.json
[2025-12-20 05:28:41] -rw------- 1 boinc boinc   1516240 Dec 20 05:28 agis_ddmendpoints.agis.ALL.json
[2025-12-20 05:28:41] -rw------- 1 boinc boinc   1377036 Dec 20 05:28 log.47960988._000057.job.log.tgz.1
[2025-12-20 05:28:41] -rw------- 1 boinc boinc      8572 Dec 20 05:28 heartbeat.json
[2025-12-20 05:28:41] -rw-r--r-- 1 boinc boinc      8192 Dec 20 05:28 boinc_mmap_file
[2025-12-20 05:28:41] -rw-r--r-- 1 boinc boinc        29 Dec 20 05:28 wrapper_checkpoint.txt
[2025-12-20 05:28:41] -rw------- 1 boinc boinc       746 Dec 20 05:28 pilotlog.txt
[2025-12-20 05:28:41] -rw------- 1 boinc boinc        95 Dec 20 05:28 pilot_heartbeat.json
[2025-12-20 05:28:41] -rw------- 1 boinc boinc   8111316 Dec 20 05:28 log.47960988._000057.job.log.1
[2025-12-20 05:28:41] -rw------- 1 boinc boinc       353 Dec 20 05:28 output.list
[2025-12-20 05:28:41] -rw-r--r-- 1 boinc boinc       620 Dec 20 05:28 runtime_log
[2025-12-20 05:28:41] -rw------- 1 boinc boinc   9512960 Dec 20 05:28 result.tar.gz
[2025-12-20 05:28:41] -rw-r--r-- 1 boinc boinc      8918 Dec 20 05:28 runtime_log.err
[2025-12-20 05:28:41] -rw------- 1 boinc boinc       671 Dec 20 05:28 MzHODm51eq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvQaKDmzfsdSn.diag
[2025-12-20 05:28:41] -rw-r--r-- 1 boinc boinc     21240 Dec 20 05:28 stderr.txt
[2025-12-20 05:28:41] HITS file was successfully produced:
[2025-12-20 05:28:41] -rw------- 1 boinc boinc 988503053 Dec 20 05:27 shared/HITS.pool.root.1
[2025-12-20 05:28:41]  *** Contents of shared directory: ***
[2025-12-20 05:28:41] total 1379752
[2025-12-20 05:28:41] -rw-r--r-- 2 boinc boinc 414226712 Dec 19 13:21 ATLAS.root_0
[2025-12-20 05:28:41] -rw-r--r-- 2 boinc boinc    592595 Dec 19 13:21 input.tar.gz
[2025-12-20 05:28:41] -rw-r--r-- 2 boinc boinc     15847 Dec 19 13:21 start_atlas.sh
[2025-12-20 05:28:41] -rw------- 1 boinc boinc 988503053 Dec 20 05:27 HITS.pool.root.1
[2025-12-20 05:28:41] -rw------- 1 boinc boinc   9512960 Dec 20 05:28 result.tar.gz
05:28:42 (980583): run_atlas exited; CPU time 115204.972657
05:28:42 (980583): called boinc_finish(0)

</stderr_txt>
]]>

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