Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:17:17 (3419762): wrapper (7.7.26015): starting
19:17:17 (3419762): wrapper: running run_atlas (--nthreads 4)
[2025-12-19 19:17:17] Arguments: --nthreads 4
[2025-12-19 19:17:17] Threads: 4
[2025-12-19 19:17:17] Checking for CVMFS
[2025-12-19 19:17:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 19:17:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 19:17:17] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 19:17:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 19:17:17] 2.9.2.0 504409 9420 99212 154198 1 56 21534692 36864000 0 130560 0 7641743 99.991 344344 10761 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-19 19:17:17] CVMFS is ok
[2025-12-19 19:17:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-19 19:17:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-19 19:17:17] Further information can be found at the LHC@home message board.
[2025-12-19 19:17:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 19:17:17] Checking for apptainer binary...
[2025-12-19 19:17:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 19:17:17] Running /usr/bin/apptainer --version
[2025-12-19 19:17:17] apptainer version 1.4.1-1.1
[2025-12-19 19:17:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 19:17:18] thA314a
[2025-12-19 19:17:18] apptainer works
[2025-12-19 19:17:18] Set ATHENA_PROC_NUMBER=4
[2025-12-19 19:17:18] Set ATHENA_CORE_NUMBER=4
[2025-12-19 19:17:18] Starting ATLAS job with PandaID=6934216730
[2025-12-19 19:17:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 20:55:38]  *** The last 200 lines of the pilot log: ***
[2025-12-19 20:55:38] 2025-12-19 19:54:33,101 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 20:55:38] 2025-12-19 19:54:33,101 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 20:55:38] 2025-12-19 19:54:33,303 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-19 20:55:38] 2025-12-19 19:54:33,303 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-19 20:55:38] 2025-12-19 19:54:33,303 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 20:55:38] 2025-12-19 19:54:33,303 | INFO     | will abort loop
[2025-12-19 20:55:38] 2025-12-19 19:54:33,329 | INFO     | all payload control threads have been joined
[2025-12-19 20:55:38] 2025-12-19 19:54:33,461 | INFO     | all job control threads have been joined
[2025-12-19 20:55:38] 2025-12-19 19:54:33,923 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 20:55:38] 2025-12-19 19:54:34,072 | INFO     | all data control threads have been joined
[2025-12-19 20:55:38] 2025-12-19 19:54:34,106 | INFO     | [job] queue monitor thread has finished
[2025-12-19 20:55:38] 2025-12-19 19:54:34,107 | INFO     | [job] retrieve thread has finished
[2025-12-19 20:55:38] 2025-12-19 19:54:34,191 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 20:55:38] 2025-12-19 19:54:34,206 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 20:55:38] 2025-12-19 19:54:34,309 | INFO     | [job] job monitor thread has finished
[2025-12-19 20:55:38] 2025-12-19 19:54:34,335 | INFO     | [payload] control thread has finished
[2025-12-19 20:55:38] 2025-12-19 19:54:34,442 | INFO     | [data] copytool_in thread has finished
[2025-12-19 20:55:38] 2025-12-19 19:54:34,467 | INFO     | [job] control thread has finished
[2025-12-19 20:55:38] 2025-12-19 19:54:34,915 | INFO     | [payload] validate_post thread has finished
[2025-12-19 20:55:38] 2025-12-19 19:54:35,078 | INFO     | [data] control thread has finished
[2025-12-19 20:55:38] 2025-12-19 19:54:35,296 | INFO     | [payload] failed_post thread has finished
[2025-12-19 20:55:38] 2025-12-19 19:54:35,448 | INFO     | [job] validate thread has finished
[2025-12-19 20:55:38] 2025-12-19 19:54:35,605 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 20:55:38] 2025-12-19 19:54:35,930 | INFO     | [data] copytool_out thread has finished
[2025-12-19 20:55:38] 2025-12-19 19:54:36,041 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 20:55:38] 2025-12-19 19:54:40,048 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 20:55:38] 2025-12-19 19:54:43,182 | INFO     | job.realtimelogging is not enabled
[2025-12-19 20:55:38] 2025-12-19 19:54:44,188 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 20:55:38] 2025-12-19 19:55:04,107 | INFO     | PID=3423539 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-19 20:55:38] 2025-12-19 19:55:04,108 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 20:55:38] 2025-12-19 19:55:04,108 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 20:55:38] 2025-12-19 19:55:04,108 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 20:55:38] 2025-12-19 19:55:33,183 | INFO     | [monitor] cgroup control has ended
[2025-12-19 20:55:38] 2025-12-19 19:55:33,580 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139945874048832)>', '<ExcThread(monitor, started 139944764880640)>']
[2025-12-19 20:55:38] 2025-12-19 19:55:34,267 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 20:55:38] 2025-12-19 19:55:34,268 | INFO     | [monitor] control thread has ended
[2025-12-19 20:55:38] 2025-12-19 19:55:38,606 | INFO     | all workflow threads have been joined
[2025-12-19 20:55:38] 2025-12-19 19:55:38,606 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 20:55:38] 2025-12-19 19:55:38,607 | INFO     | traces error code: 0
[2025-12-19 20:55:38] 2025-12-19 19:55:38,607 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 20:55:38] 2025-12-19 19:55:38,677 [wrapper] ==== pilot stdout END ====
[2025-12-19 20:55:38] 2025-12-19 19:55:38,681 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 20:55:38] 2025-12-19 19:55:38,684 [wrapper] pilotpid: 3423539
[2025-12-19 20:55:38] 2025-12-19 19:55:38,688 [wrapper] Pilot exit status: 0
[2025-12-19 20:55:38] 2025-12-19 19:55:38,699 [wrapper] pandaids: 6934216730
[2025-12-19 20:55:38] 2025-12-19 19:55:38,721 [wrapper] cleanup supervisor_pilot 3442294 3423540
[2025-12-19 20:55:38] 2025-12-19 19:55:38,725 [wrapper] Test setup, not cleaning
[2025-12-19 20:55:38] 2025-12-19 19:55:38,729 [wrapper] apfmon messages muted
[2025-12-19 20:55:38] 2025-12-19 19:55:38,732 [wrapper] ==== wrapper stdout END ====
[2025-12-19 20:55:38] 2025-12-19 19:55:38,736 [wrapper] ==== wrapper stderr END ====
[2025-12-19 20:55:38]  *** Error codes and diagnostics ***
[2025-12-19 20:55:38]     "exeErrorCode": 0,
[2025-12-19 20:55:38]     "exeErrorDiag": "",
[2025-12-19 20:55:38]     "pilotErrorCode": 0,
[2025-12-19 20:55:38]     "pilotErrorDiag": "",
[2025-12-19 20:55:38]  *** Listing of results directory ***
[2025-12-19 20:55:38] total 439496
[2025-12-19 20:55:38] -rw-r--r-- 1 boinc boinc    579449 Dec 18 21:41 pilot3.tar.gz
[2025-12-19 20:55:38] -rwx------ 1 boinc boinc     36322 Dec 18 21:41 runpilot2-wrapper.sh
[2025-12-19 20:55:38] -rw-r--r-- 1 boinc boinc      5112 Dec 18 21:42 queuedata.json
[2025-12-19 20:55:38] -rw-r--r-- 1 boinc boinc       100 Dec 19 19:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 20:55:38] -rwxr-xr-x 1 boinc boinc      7986 Dec 19 19:17 run_atlas
[2025-12-19 20:55:38] -rw-r--r-- 1 boinc boinc       105 Dec 19 19:17 job.xml
[2025-12-19 20:55:38] -rw-r--r-- 2 boinc boinc 223697501 Dec 19 19:17 EVNT.47898761._000962.pool.root.1
[2025-12-19 20:55:38] drwxrwx--x 2 boinc boinc      4096 Dec 19 19:17 shared
[2025-12-19 20:55:38] -rw-r--r-- 2 boinc boinc    592402 Dec 19 19:17 input.tar.gz
[2025-12-19 20:55:38] -rw-r--r-- 2 boinc boinc     15847 Dec 19 19:17 start_atlas.sh
[2025-12-19 20:55:38] -rw-r--r-- 1 boinc boinc         0 Dec 19 19:17 boinc_setup_complete
[2025-12-19 20:55:38] -rw-r--r-- 1 boinc boinc      6371 Dec 19 19:17 init_data.xml
[2025-12-19 20:55:38] -rw-r--r-- 1 boinc boinc         0 Dec 19 19:17 boinc_lockfile
[2025-12-19 20:55:38] -rw-r--r-- 1 boinc boinc      2508 Dec 19 19:17 pandaJob.out
[2025-12-19 20:55:38] -rw------- 1 boinc boinc    988154 Dec 19 19:17 agis_schedconf.cvmfs.json
[2025-12-19 20:55:38] -rw------- 1 boinc boinc   1516240 Dec 19 19:17 agis_ddmendpoints.agis.ALL.json
[2025-12-19 20:55:38] drwx------ 5 boinc boinc      4096 Dec 19 19:17 pilot3
[2025-12-19 20:55:38] -rw------- 1 boinc boinc 220191927 Dec 19 20:54 HITS.47898763._025063.pool.root.1
[2025-12-19 20:55:38] -rw-r--r-- 1 boinc boinc       530 Dec 19 20:54 boinc_task_state.xml
[2025-12-19 20:55:38] -rw------- 1 boinc boinc      1019 Dec 19 20:54 memory_monitor_summary.json
[2025-12-19 20:55:38] -rw------- 1 boinc boinc    285686 Dec 19 20:54 log.47898763._025063.job.log.tgz.1
[2025-12-19 20:55:38] -rw------- 1 boinc boinc      7759 Dec 19 20:54 heartbeat.json
[2025-12-19 20:55:38] -rw------- 1 boinc boinc        95 Dec 19 20:55 pilot_heartbeat.json
[2025-12-19 20:55:38] -rw-r--r-- 1 boinc boinc      8192 Dec 19 20:55 boinc_mmap_file
[2025-12-19 20:55:38] -rw-r--r-- 1 boinc boinc        27 Dec 19 20:55 wrapper_checkpoint.txt
[2025-12-19 20:55:38] -rw------- 1 boinc boinc      5010 Dec 19 20:55 pilotlog.txt
[2025-12-19 20:55:38] -rw------- 1 boinc boinc    847023 Dec 19 20:55 log.47898763._025063.job.log.1
[2025-12-19 20:55:38] -rw------- 1 boinc boinc       357 Dec 19 20:55 output.list
[2025-12-19 20:55:38] -rw-r--r-- 1 boinc boinc       620 Dec 19 20:55 runtime_log
[2025-12-19 20:55:38] -rw------- 1 boinc boinc   1146880 Dec 19 20:55 result.tar.gz
[2025-12-19 20:55:38] -rw-r--r-- 1 boinc boinc      8902 Dec 19 20:55 runtime_log.err
[2025-12-19 20:55:38] -rw------- 1 boinc boinc       660 Dec 19 20:55 IM8KDmazZq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuxZKDmGjs3Om.diag
[2025-12-19 20:55:38] -rw-r--r-- 1 boinc boinc      7661 Dec 19 20:55 stderr.txt
[2025-12-19 20:55:38] HITS file was successfully produced:
[2025-12-19 20:55:38] -rw------- 1 boinc boinc 220191927 Dec 19 20:54 shared/HITS.pool.root.1
[2025-12-19 20:55:38]  *** Contents of shared directory: ***
[2025-12-19 20:55:38] total 435212
[2025-12-19 20:55:38] -rw-r--r-- 2 boinc boinc 223697501 Dec 19 19:17 ATLAS.root_0
[2025-12-19 20:55:38] -rw-r--r-- 2 boinc boinc    592402 Dec 19 19:17 input.tar.gz
[2025-12-19 20:55:38] -rw-r--r-- 2 boinc boinc     15847 Dec 19 19:17 start_atlas.sh
[2025-12-19 20:55:38] -rw------- 1 boinc boinc 220191927 Dec 19 20:54 HITS.pool.root.1
[2025-12-19 20:55:38] -rw------- 1 boinc boinc   1146880 Dec 19 20:55 result.tar.gz
20:55:40 (3419762): run_atlas exited; CPU time 22213.311713
20:55:40 (3419762): called boinc_finish(0)

</stderr_txt>
]]>

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