Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:33:54 (25331): wrapper (7.7.26015): starting
00:33:54 (25331): wrapper: running run_atlas (--nthreads 8)
[2025-12-19 00:33:54] Arguments: --nthreads 8
[2025-12-19 00:33:54] Threads: 8
[2025-12-19 00:33:54] Checking for CVMFS
[2025-12-19 00:33:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 00:33:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 00:33:54] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 00:33:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 00:33:54] 2.11.2.0 31396 150362 139360 154178 3 59 15317825 18432001 1833 130560 0 111722727 99.979 5949174 35136 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-19 00:33:54] CVMFS is ok
[2025-12-19 00:33:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-19 00:33:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-19 00:33:54] Further information can be found at the LHC@home message board.
[2025-12-19 00:33:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 00:33:54] Checking for apptainer binary...
[2025-12-19 00:33:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 00:33:54] Running /usr/bin/apptainer --version
[2025-12-19 00:33:54] apptainer version 1.3.2-1.el7
[2025-12-19 00:33:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 00:33:55] c-206-10.aglt2.org
[2025-12-19 00:33:55] apptainer works
[2025-12-19 00:33:55] Set ATHENA_PROC_NUMBER=8
[2025-12-19 00:33:55] Set ATHENA_CORE_NUMBER=8
[2025-12-19 00:33:55] Starting ATLAS job with PandaID=6934185079
[2025-12-19 00:33:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 04:49:37]  *** The last 200 lines of the pilot log: ***
[2025-12-19 04:49:37] 2025-12-19 09:48:43,316 | INFO     | total number of processed events: 400 (read)
[2025-12-19 04:49:37] 2025-12-19 09:48:43,316 | INFO     | executing command: lscpu
[2025-12-19 04:49:37] 2025-12-19 09:48:43,339 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-19 04:49:37] 2025-12-19 09:48:44,407 | INFO     | time since job start (15278s) is within the limit (174528.0s)
[2025-12-19 04:49:37] 2025-12-19 09:48:44,412 | INFO     | monitor loop #1094: job 0:6934185079 is in state 'finished'
[2025-12-19 04:49:37] 2025-12-19 09:48:44,413 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 04:49:37] 2025-12-19 09:48:46,413 | INFO     | time since job start (15280s) is within the limit (174528.0s)
[2025-12-19 04:49:37] 2025-12-19 09:48:46,775 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-19 04:49:37] 2025-12-19 09:48:46,782 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2472.375
[2025-12-19 04:49:37] 2025-12-19 09:48:46,786 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6934185079/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 04:49:37] 2025-12-19 09:48:46,787 | INFO     | extracted standard info from prmon json
[2025-12-19 04:49:37] 2025-12-19 09:48:46,787 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 04:49:37] 2025-12-19 09:48:46,787 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 04:49:37] 2025-12-19 09:48:46,788 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 04:49:37] 2025-12-19 09:48:46,788 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 04:49:37] 2025-12-19 09:48:46,795 | INFO     | fitting pss+swap vs Time
[2025-12-19 04:49:37] 2025-12-19 09:48:46,796 | INFO     | sum of square deviations: 4844974562.5
[2025-12-19 04:49:37] 2025-12-19 09:48:46,798 | INFO     | sum of deviations: 9457076927.999996
[2025-12-19 04:49:37] 2025-12-19 09:48:46,799 | INFO     | mean x: 1766130066.5
[2025-12-19 04:49:37] 2025-12-19 09:48:46,799 | INFO     | mean y: 2503946.304
[2025-12-19 04:49:37] 2025-12-19 09:48:46,799 | INFO     | intersect: -3444867693.791014
[2025-12-19 04:49:37] 2025-12-19 09:48:46,800 | INFO     | chi2: 1.2158035073008322
[2025-12-19 04:49:37] 2025-12-19 09:48:46,800 | INFO     | sum of square deviations: 4560048290.0
[2025-12-19 04:49:37] 2025-12-19 09:48:46,803 | INFO     | sum of deviations: 9065998363.999996
[2025-12-19 04:49:37] 2025-12-19 09:48:46,803 | INFO     | mean x: 1766129914.0
[2025-12-19 04:49:37] 2025-12-19 09:48:46,803 | INFO     | mean y: 2503737.1142857145
[2025-12-19 04:49:37] 2025-12-19 09:48:46,803 | INFO     | intersect: -3508803576.4614334
[2025-12-19 04:49:37] 2025-12-19 09:48:46,804 | INFO     | chi2: 1.2159580270378578
[2025-12-19 04:49:37] 2025-12-19 09:48:46,804 | INFO     | current chi2=1.2159580270378578 (change=-0.012709268898941683 %)
[2025-12-19 04:49:37] 2025-12-19 09:48:46,804 | INFO     | right removable region: 244
[2025-12-19 04:49:37] 2025-12-19 09:48:46,805 | INFO     | sum of square deviations: 4560048290.0
[2025-12-19 04:49:37] 2025-12-19 09:48:46,807 | INFO     | sum of deviations: -20767899203.999992
[2025-12-19 04:49:37] 2025-12-19 09:48:46,807 | INFO     | mean x: 1766130219.0
[2025-12-19 04:49:37] 2025-12-19 09:48:46,807 | INFO     | mean y: 2519946.5142857144
[2025-12-19 04:49:37] 2025-12-19 09:48:46,808 | INFO     | intersect: 8046034408.798726
[2025-12-19 04:49:37] 2025-12-19 09:48:46,808 | INFO     | chi2: 0.04896703530077009
[2025-12-19 04:49:37] 2025-12-19 09:48:46,808 | INFO     | current chi2=0.04896703530077009 (change=95.97245484103922 %)
[2025-12-19 04:49:37] 2025-12-19 09:48:46,809 | INFO     | sum of square deviations: 4286517580.0
[2025-12-19 04:49:37] 2025-12-19 09:48:46,812 | INFO     | sum of deviations: -18615371464.000004
[2025-12-19 04:49:37] 2025-12-19 09:48:46,812 | INFO     | mean x: 1766130371.5
[2025-12-19 04:49:37] 2025-12-19 09:48:46,812 | INFO     | mean y: 2518745.9
[2025-12-19 04:49:37] 2025-12-19 09:48:46,812 | INFO     | intersect: 7672421482.966302
[2025-12-19 04:49:37] 2025-12-19 09:48:46,813 | INFO     | chi2: 0.04843578112251972
[2025-12-19 04:49:37] 2025-12-19 09:48:46,813 | INFO     | current chi2=0.04843578112251972 (change=1.0849220807166426 %)
[2025-12-19 04:49:37] 2025-12-19 09:48:46,813 | INFO     | left removable region: 20
[2025-12-19 04:49:37] 2025-12-19 09:48:46,814 | INFO     | sum of square deviations: 3485088600.0
[2025-12-19 04:49:37] 2025-12-19 09:48:46,816 | INFO     | sum of deviations: -11905435697.000002
[2025-12-19 04:49:37] 2025-12-19 09:48:46,816 | INFO     | mean x: 1766130493.5
[2025-12-19 04:49:37] 2025-12-19 09:48:46,816 | INFO     | mean y: 2514797.973214286
[2025-12-19 04:49:37] 2025-12-19 09:48:46,816 | INFO     | intersect: 6035805608.105022
[2025-12-19 04:49:37] 2025-12-19 09:48:46,817 | INFO     | chi2: 0.041192115154721994
[2025-12-19 04:49:37] 2025-12-19 09:48:46,817 | INFO     | current memory leak: -3.42 B/s (using 224 data points, chi2=0.04)
[2025-12-19 04:49:37] 2025-12-19 09:48:46,818 | INFO     | could have reported an average CPU frequency of 2590 MHz (12 samples)
[2025-12-19 04:49:37] 2025-12-19 09:48:46,818 | INFO     | ..............................
[2025-12-19 04:49:37] 2025-12-19 09:48:46,818 | INFO     | . Timing measurements:
[2025-12-19 04:49:37] 2025-12-19 09:48:46,818 | INFO     | . get job = 0 s
[2025-12-19 04:49:37] 2025-12-19 09:48:46,818 | INFO     | . initial setup = 2 s
[2025-12-19 04:49:37] 2025-12-19 09:48:46,819 | INFO     | . payload setup = 4 s
[2025-12-19 04:49:37] 2025-12-19 09:48:46,819 | INFO     | . stage-in = 0 s
[2025-12-19 04:49:37] 2025-12-19 09:48:46,819 | INFO     | . payload execution = 15247 s
[2025-12-19 04:49:37] 2025-12-19 09:48:46,819 | INFO     | . stage-out = 2 s
[2025-12-19 04:49:37] 2025-12-19 09:48:46,819 | INFO     | . log creation = 0 s
[2025-12-19 04:49:37] 2025-12-19 09:48:46,819 | INFO     | ..............................
[2025-12-19 04:49:37] 2025-12-19 09:48:46,927 | INFO     | 
[2025-12-19 04:49:37] 2025-12-19 09:48:46,927 | INFO     | job summary report
[2025-12-19 04:49:37] 2025-12-19 09:48:46,927 | INFO     | --------------------------------------------------
[2025-12-19 04:49:37] 2025-12-19 09:48:46,927 | INFO     | PanDA job id: 6934185079
[2025-12-19 04:49:37] 2025-12-19 09:48:46,927 | INFO     | task id: 47898763
[2025-12-19 04:49:37] 2025-12-19 09:48:46,928 | INFO     | errors: (none)
[2025-12-19 04:49:37] 2025-12-19 09:48:46,928 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 04:49:37] 2025-12-19 09:48:46,928 | INFO     | pilot state: finished 
[2025-12-19 04:49:37] 2025-12-19 09:48:46,928 | INFO     | transexitcode: 0
[2025-12-19 04:49:37] 2025-12-19 09:48:46,928 | INFO     | exeerrorcode: 0
[2025-12-19 04:49:37] 2025-12-19 09:48:46,928 | INFO     | exeerrordiag: 
[2025-12-19 04:49:37] 2025-12-19 09:48:46,929 | INFO     | exitcode: 0
[2025-12-19 04:49:37] 2025-12-19 09:48:46,929 | INFO     | exitmsg: OK
[2025-12-19 04:49:37] 2025-12-19 09:48:46,929 | INFO     | cpuconsumptiontime: 117314 s
[2025-12-19 04:49:37] 2025-12-19 09:48:46,929 | INFO     | nevents: 400
[2025-12-19 04:49:37] 2025-12-19 09:48:46,929 | INFO     | neventsw: 0
[2025-12-19 04:49:37] 2025-12-19 09:48:46,929 | INFO     | pid: 3156
[2025-12-19 04:49:37] 2025-12-19 09:48:46,930 | INFO     | pgrp: 3156
[2025-12-19 04:49:37] 2025-12-19 09:48:46,930 | INFO     | corecount: 8
[2025-12-19 04:49:37] 2025-12-19 09:48:46,930 | INFO     | event service: False
[2025-12-19 04:49:37] 2025-12-19 09:48:46,930 | INFO     | sizes: {0: 2283959, 1: 2283959, 4: 2284249, 12: 2284277, 15256: 2315376, 15258: 2324374, 15259: 2324558, 15265: 2324752}
[2025-12-19 04:49:37] 2025-12-19 09:48:46,930 | INFO     | --------------------------------------------------
[2025-12-19 04:49:37] 2025-12-19 09:48:46,930 | INFO     | 
[2025-12-19 04:49:37] 2025-12-19 09:48:46,931 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-19 04:49:37] 2025-12-19 09:48:46,952 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 04:49:37] 2025-12-19 09:48:46,952 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 04:49:37] 2025-12-19 09:48:46,953 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 04:49:37] 2025-12-19 09:48:46,953 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 04:49:37] 2025-12-19 09:48:46,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 04:49:37] 2025-12-19 09:48:46,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 04:49:37] 2025-12-19 09:48:46,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 04:49:37] 2025-12-19 09:48:46,954 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 04:49:37] 2025-12-19 09:48:46,954 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 04:49:37] 2025-12-19 09:48:46,954 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 04:49:37] 2025-12-19 09:48:46,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 04:49:37] 2025-12-19 09:48:46,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 04:49:37] 2025-12-19 09:48:46,954 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 04:49:37] 2025-12-19 09:48:46,955 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 04:49:37] 2025-12-19 09:48:46,955 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 04:49:37] 2025-12-19 09:48:46,955 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 04:49:37] 2025-12-19 09:48:46,955 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 04:49:37] 2025-12-19 09:48:46,955 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 04:49:37] 2025-12-19 09:48:46,956 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 04:49:37] 2025-12-19 09:48:46,956 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 04:49:37] 2025-12-19 09:48:46,956 | INFO     | job 6934185079 has completed (purged errors)
[2025-12-19 04:49:37] 2025-12-19 09:48:46,956 | INFO     | overall cleanup function is called
[2025-12-19 04:49:37] 2025-12-19 09:48:47,965 | INFO     | --- collectZombieJob: --- 10, [3156]
[2025-12-19 04:49:37] 2025-12-19 09:48:47,965 | INFO     | zombie collector waiting for pid 3156
[2025-12-19 04:49:37] 2025-12-19 09:48:47,965 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 04:49:37] 2025-12-19 09:48:47,965 | INFO     | collected zombie processes
[2025-12-19 04:49:37] 2025-12-19 09:48:47,965 | INFO     | will attempt to kill all subprocesses of pid=3156
[2025-12-19 04:49:37] 2025-12-19 09:48:48,124 | INFO     | process IDs to be killed: [3156] (in reverse order)
[2025-12-19 04:49:37] 2025-12-19 09:48:48,182 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 04:49:37] 2025-12-19 09:48:48,183 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 04:49:37] 2025-12-19 09:48:48,188 | INFO     | did not find any defunct processes belonging to 3156
[2025-12-19 04:49:37] 2025-12-19 09:48:48,193 | INFO     | did not find any defunct processes belonging to 3156
[2025-12-19 04:49:37] 2025-12-19 09:48:48,193 | INFO     | ready for new job
[2025-12-19 04:49:37] 2025-12-19 09:48:48,193 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 04:49:37] 2025-12-19 09:48:48,196 | INFO     | ***************************************
[2025-12-19 04:49:37] 2025-12-19 09:48:48,196 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 04:49:37] 2025-12-19 09:48:48,196 | INFO     | ***************************************
[2025-12-19 04:49:37] 2025-12-19 09:48:48,196 | INFO     | 
[2025-12-19 04:49:37] 2025-12-19 09:48:48,197 | INFO     | architecture information:
[2025-12-19 04:49:37] 2025-12-19 09:48:48,198 | INFO     | executing command: cat /etc/os-release
[2025-12-19 04:49:37] 2025-12-19 09:48:48,210 | INFO     | cat /etc/os-release:
[2025-12-19 04:49:37] NAME="CentOS Linux"
[2025-12-19 04:49:37] VERSION="7 (Core)"
[2025-12-19 04:49:37] ID="centos"
[2025-12-19 04:49:37] ID_LIKE="rhel fedora"
[2025-12-19 04:49:37] VERSION_ID="7"
[2025-12-19 04:49:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 04:49:37] ANSI_COLOR="0;31"
[2025-12-19 04:49:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 04:49:37] HOME_URL="https://www.centos.org/"
[2025-12-19 04:49:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 04:49:37] 
[2025-12-19 04:49:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 04:49:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 04:49:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 04:49:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 04:49:37] 
[2025-12-19 04:49:37] 2025-12-19 09:48:48,211 | INFO     | ***************************************
[2025-12-19 04:49:37] 2025-12-19 09:48:48,715 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-19 04:49:37] 2025-12-19 09:48:48,736 | INFO     | sufficient remaining disk space (27982299136 B)
[2025-12-19 04:49:37] 2025-12-19 09:48:48,737 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 04:49:37] 2025-12-19 09:48:48,737 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 04:49:37] 2025-12-19 09:48:48,737 | INFO     | update_server=False
[2025-12-19 04:49:37] 2025-12-19 09:48:48,737 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 04:49:37] 2025-12-19 09:48:48,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 04:49:37] 2025-12-19 09:48:48,738 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 04:49:37] 2025-12-19 09:48:48,738 | INFO     | aborting loop
[2025-12-19 04:49:37] 2025-12-19 09:48:48,738 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 04:49:37] 2025-12-19 09:48:48,779 | INFO     | all payload control threads have been joined
[2025-12-19 04:49:37] 2025-12-19 09:48:49,744 | INFO     | [job] retrieve thread has finished
[2025-12-19 04:49:37] 2025-12-19 09:48:49,745 | INFO     | [job] queue monitor thread has finished
[2025-12-19 04:49:37] 2025-12-19 09:48:49,744 | INFO     | [job] job monitor thread has finished
[2025-12-19 04:49:37] 2025-12-19 09:48:49,785 | INFO     | [payload] control thread has finished
[2025-12-19 04:49:37] 2025-12-19 09:48:49,818 | INFO     | all data control threads have been joined
[2025-12-19 04:49:37] 2025-12-19 09:48:49,854 | INFO     | [payload] validate_post thread has finished
[2025-12-19 04:49:37] 2025-12-19 09:48:49,962 | INFO     | [data] copytool_in thread has finished
[2025-12-19 04:49:37] 2025-12-19 09:48:50,370 | INFO     | all job control threads have been joined
[2025-12-19 04:49:37] 2025-12-19 09:48:50,512 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 04:49:37] 2025-12-19 09:48:50,645 | INFO     | [payload] failed_post thread has finished
[2025-12-19 04:49:37] 2025-12-19 09:48:50,698 | INFO     | [job] validate thread has finished
[2025-12-19 04:49:37] 2025-12-19 09:48:50,743 | INFO     | [data] copytool_out thread has finished
[2025-12-19 04:49:37] 2025-12-19 09:48:50,821 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 04:49:37] 2025-12-19 09:48:50,823 | INFO     | [data] control thread has finished
[2025-12-19 04:49:37] 2025-12-19 09:48:50,947 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 04:49:37] 2025-12-19 09:48:51,375 | INFO     | [job] control thread has finished
[2025-12-19 04:49:37] 2025-12-19 09:48:51,481 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 04:49:37] 2025-12-19 09:48:55,493 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 04:49:37] 2025-12-19 09:48:59,090 | INFO     | job.realtimelogging is not enabled
[2025-12-19 04:49:37] 2025-12-19 09:49:00,095 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 04:49:37] 2025-12-19 09:49:04,677 [wrapper] supervise_pilot (15 min periods counter: 18)
[2025-12-19 04:49:37] 2025-12-19 09:49:19,642 | INFO     | PID=29119 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-19 04:49:37] 2025-12-19 09:49:19,642 | INFO     | .. there are 3 such processes running
[2025-12-19 04:49:37] 2025-12-19 09:49:19,642 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 04:49:37] 2025-12-19 09:49:19,643 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 04:49:37] 2025-12-19 09:49:19,643 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 04:49:37] 2025-12-19 09:49:31,073 | INFO     | [monitor] cgroup control has ended
[2025-12-19 04:49:37] 2025-12-19 09:49:31,989 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139749036738368)>', '<ExcThread(monitor, started 139748739888896)>']
[2025-12-19 04:49:37] 2025-12-19 09:49:32,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 04:49:37] 2025-12-19 09:49:32,713 | INFO     | [monitor] control thread has ended
[2025-12-19 04:49:37] 2025-12-19 09:49:37,013 | INFO     | all workflow threads have been joined
[2025-12-19 04:49:37] 2025-12-19 09:49:37,014 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 04:49:37] 2025-12-19 09:49:37,014 | INFO     | traces error code: 0
[2025-12-19 04:49:37] 2025-12-19 09:49:37,014 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 04:49:37] 2025-12-19 09:49:37,126 [wrapper] ==== pilot stdout END ====
[2025-12-19 04:49:37] 2025-12-19 09:49:37,128 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 04:49:37] 2025-12-19 09:49:37,131 [wrapper] pilotpid: 29119
[2025-12-19 04:49:37] 2025-12-19 09:49:37,133 [wrapper] Pilot exit status: 0
[2025-12-19 04:49:37] 2025-12-19 09:49:37,143 [wrapper] pandaids: 6934185079
[2025-12-19 04:49:37] 2025-12-19 09:49:37,179 [wrapper] cleanup supervisor_pilot 29500 29120
[2025-12-19 04:49:37] 2025-12-19 09:49:37,181 [wrapper] Test setup, not cleaning
[2025-12-19 04:49:37] 2025-12-19 09:49:37,183 [wrapper] apfmon messages muted
[2025-12-19 04:49:37] 2025-12-19 09:49:37,185 [wrapper] ==== wrapper stdout END ====
[2025-12-19 04:49:37] 2025-12-19 09:49:37,187 [wrapper] ==== wrapper stderr END ====
[2025-12-19 04:49:37]  *** Error codes and diagnostics ***
[2025-12-19 04:49:37]     "exeErrorCode": 0,
[2025-12-19 04:49:37]     "exeErrorDiag": "",
[2025-12-19 04:49:37]     "pilotErrorCode": 0,
[2025-12-19 04:49:37]     "pilotErrorDiag": "",
[2025-12-19 04:49:37]  *** Listing of results directory ***
[2025-12-19 04:49:37] total 444076
[2025-12-19 04:49:37] -rw-r--r-- 1 boincer umatlas    579449 Dec 18 13:20 pilot3.tar.gz
[2025-12-19 04:49:37] -rwx------ 1 boincer umatlas     36322 Dec 18 13:22 runpilot2-wrapper.sh
[2025-12-19 04:49:37] -rw-r--r-- 1 boincer umatlas      5112 Dec 18 13:25 queuedata.json
[2025-12-19 04:49:37] -rw-r--r-- 1 boincer umatlas       100 Dec 19 00:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 04:49:37] -rwxr-xr-x 1 boincer umatlas      7986 Dec 19 00:33 run_atlas
[2025-12-19 04:49:37] -rw-r--r-- 1 boincer umatlas       105 Dec 19 00:33 job.xml
[2025-12-19 04:49:37] -rw-r--r-- 2 boincer umatlas 222010931 Dec 19 00:33 EVNT.47898761._000936.pool.root.1
[2025-12-19 04:49:37] -rw-r--r-- 2 boincer umatlas     15847 Dec 19 00:33 start_atlas.sh
[2025-12-19 04:49:37] drwxrwx--x 2 boincer umatlas      4096 Dec 19 00:33 shared
[2025-12-19 04:49:37] -rw-r--r-- 2 boincer umatlas    592401 Dec 19 00:33 input.tar.gz
[2025-12-19 04:49:37] -rw-r--r-- 1 boincer umatlas         0 Dec 19 00:33 boinc_lockfile
[2025-12-19 04:49:37] -rw-r--r-- 1 boincer umatlas      2509 Dec 19 00:33 pandaJob.out
[2025-12-19 04:49:37] -rw------- 1 boincer umatlas        57 Dec 19 00:33 setup.sh.local
[2025-12-19 04:49:37] -rw------- 1 boincer umatlas    988888 Dec 19 00:34 agis_schedconf.cvmfs.json
[2025-12-19 04:49:37] drwx------ 5 boincer umatlas      4096 Dec 19 00:34 pilot3
[2025-12-19 04:49:37] -rw-r--r-- 1 boincer umatlas      5953 Dec 19 04:37 init_data.xml
[2025-12-19 04:49:37] -rw------- 1 boincer umatlas 223606204 Dec 19 04:48 HITS.47898763._024413.pool.root.1
[2025-12-19 04:49:37] -rw-r--r-- 1 boincer umatlas       532 Dec 19 04:48 boinc_task_state.xml
[2025-12-19 04:49:37] -rw------- 1 boincer umatlas        95 Dec 19 04:48 pilot_heartbeat.json
[2025-12-19 04:49:37] -rw------- 1 boincer umatlas      1053 Dec 19 04:48 memory_monitor_summary.json
[2025-12-19 04:49:37] -rw------- 1 boincer umatlas   1516240 Dec 19 04:48 agis_ddmendpoints.agis.ALL.json
[2025-12-19 04:49:37] -rw------- 1 boincer umatlas    485549 Dec 19 04:48 log.47898763._024413.job.log.tgz.1
[2025-12-19 04:49:37] -rw------- 1 boincer umatlas      7857 Dec 19 04:48 heartbeat.json
[2025-12-19 04:49:37] -rw-r--r-- 1 boincer umatlas        29 Dec 19 04:49 wrapper_checkpoint.txt
[2025-12-19 04:49:37] -rw-r--r-- 1 boincer umatlas      8192 Dec 19 04:49 boinc_mmap_file
[2025-12-19 04:49:37] -rw------- 1 boincer umatlas      4893 Dec 19 04:49 pilotlog.txt
[2025-12-19 04:49:37] -rw------- 1 boincer umatlas   2117431 Dec 19 04:49 log.47898763._024413.job.log.1
[2025-12-19 04:49:37] -rw------- 1 boincer umatlas       357 Dec 19 04:49 output.list
[2025-12-19 04:49:37] -rw-r--r-- 1 boincer umatlas       620 Dec 19 04:49 runtime_log
[2025-12-19 04:49:37] -rw------- 1 boincer umatlas   2621440 Dec 19 04:49 result.tar.gz
[2025-12-19 04:49:37] -rw-r--r-- 1 boincer umatlas      9343 Dec 19 04:49 runtime_log.err
[2025-12-19 04:49:37] -rw------- 1 boincer umatlas       663 Dec 19 04:49 eCAODmWpXq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoaeKDmsRWKMo.diag
[2025-12-19 04:49:37] -rw-r--r-- 1 boincer umatlas     21277 Dec 19 04:49 stderr.txt
[2025-12-19 04:49:37] HITS file was successfully produced:
[2025-12-19 04:49:37] -rw------- 1 boincer umatlas 223606204 Dec 19 04:48 shared/HITS.pool.root.1
[2025-12-19 04:49:37]  *** Contents of shared directory: ***
[2025-12-19 04:49:37] total 438336
[2025-12-19 04:49:37] -rw-r--r-- 2 boincer umatlas 222010931 Dec 19 00:33 ATLAS.root_0
[2025-12-19 04:49:37] -rw-r--r-- 2 boincer umatlas     15847 Dec 19 00:33 start_atlas.sh
[2025-12-19 04:49:37] -rw-r--r-- 2 boincer umatlas    592401 Dec 19 00:33 input.tar.gz
[2025-12-19 04:49:37] -rw------- 1 boincer umatlas 223606204 Dec 19 04:48 HITS.pool.root.1
[2025-12-19 04:49:37] -rw------- 1 boincer umatlas   2621440 Dec 19 04:49 result.tar.gz
04:49:38 (25331): run_atlas exited; CPU time 117520.886775
04:49:38 (25331): called boinc_finish(0)

</stderr_txt>
]]>

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