Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:24:07 (20483): wrapper (7.7.26015): starting
00:24:07 (20483): wrapper: running run_atlas (--nthreads 8)
[2025-12-19 00:24:07] Arguments: --nthreads 8
[2025-12-19 00:24:07] Threads: 8
[2025-12-19 00:24:07] Checking for CVMFS
[2025-12-19 00:24:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 00:24:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 00:24:07] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 00:24:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 00:24:07] 2.11.2.0 27562 366763 286932 154178 2 97 10525204 18432001 2775 130560 7 712540560 99.345 1128903705 26016 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-12-19 00:24:07] CVMFS is ok
[2025-12-19 00:24:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-19 00:24:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-19 00:24:07] Further information can be found at the LHC@home message board.
[2025-12-19 00:24:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 00:24:07] Checking for apptainer binary...
[2025-12-19 00:24:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 00:24:07] Running /usr/bin/apptainer --version
[2025-12-19 00:24:07] apptainer version 1.3.2-1.el7
[2025-12-19 00:24:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 00:24:08] c-9-30.aglt2.org
[2025-12-19 00:24:08] apptainer works
[2025-12-19 00:24:08] Set ATHENA_PROC_NUMBER=8
[2025-12-19 00:24:08] Set ATHENA_CORE_NUMBER=8
[2025-12-19 00:24:08] Starting ATLAS job with PandaID=6933078702
[2025-12-19 00:24:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 04:23:50]  *** The last 200 lines of the pilot log: ***
[2025-12-19 04:23:50] 2025-12-19 09:22:46,738 | INFO     | monitor loop #1008: job 0:6933078702 is in state 'finished'
[2025-12-19 04:23:50] 2025-12-19 09:22:46,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 04:23:50] 2025-12-19 09:22:47,419 | INFO     | PID=24172 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-19 04:23:50] 2025-12-19 09:22:47,419 | INFO     | .. there are 4 such processes running
[2025-12-19 04:23:50] 2025-12-19 09:22:48,420 | INFO     | time since job start (14309s) is within the limit (174528.0s)
[2025-12-19 04:23:50] 2025-12-19 09:22:49,242 | INFO     | monitor loop #1009: job 0:6933078702 is in state 'finished'
[2025-12-19 04:23:50] 2025-12-19 09:22:49,242 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 04:23:50] 2025-12-19 09:22:49,329 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-19 04:23:50] 2025-12-19 09:22:49,333 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.9168750000013
[2025-12-19 04:23:50] 2025-12-19 09:22:49,336 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6933078702/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 04:23:50] 2025-12-19 09:22:49,337 | INFO     | extracted standard info from prmon json
[2025-12-19 04:23:50] 2025-12-19 09:22:49,337 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 04:23:50] 2025-12-19 09:22:49,337 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 04:23:50] 2025-12-19 09:22:49,337 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 04:23:50] 2025-12-19 09:22:49,337 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 04:23:50] 2025-12-19 09:22:49,340 | INFO     | fitting pss+swap vs Time
[2025-12-19 04:23:50] 2025-12-19 09:22:49,341 | INFO     | sum of square deviations: 3972995422.5
[2025-12-19 04:23:50] 2025-12-19 09:22:49,342 | INFO     | sum of deviations: 7312996163.000001
[2025-12-19 04:23:50] 2025-12-19 09:22:49,342 | INFO     | mean x: 1766128991.5
[2025-12-19 04:23:50] 2025-12-19 09:22:49,342 | INFO     | mean y: 2501414.9487179485
[2025-12-19 04:23:50] 2025-12-19 09:22:49,342 | INFO     | intersect: -3248369317.2595224
[2025-12-19 04:23:50] 2025-12-19 09:22:49,342 | INFO     | chi2: 1.3353922790404296
[2025-12-19 04:23:50] 2025-12-19 09:22:49,343 | INFO     | sum of square deviations: 3723716330.0
[2025-12-19 04:23:50] 2025-12-19 09:22:49,344 | INFO     | sum of deviations: 7222245670.000004
[2025-12-19 04:23:50] 2025-12-19 09:22:49,344 | INFO     | mean x: 1766128839.0
[2025-12-19 04:23:50] 2025-12-19 09:22:49,344 | INFO     | mean y: 2501359.427947598
[2025-12-19 04:23:50] 2025-12-19 09:22:49,344 | INFO     | intersect: -3422951932.3188715
[2025-12-19 04:23:50] 2025-12-19 09:22:49,344 | INFO     | chi2: 1.3357757481871406
[2025-12-19 04:23:50] 2025-12-19 09:22:49,344 | INFO     | current chi2=1.3357757481871406 (change=-0.02871584273248952 %)
[2025-12-19 04:23:50] 2025-12-19 09:22:49,344 | INFO     | right removable region: 228
[2025-12-19 04:23:50] 2025-12-19 09:22:49,345 | INFO     | sum of square deviations: 3723716330.0
[2025-12-19 04:23:50] 2025-12-19 09:22:49,346 | INFO     | sum of deviations: -23584628799.0
[2025-12-19 04:23:50] 2025-12-19 09:22:49,346 | INFO     | mean x: 1766129144.0
[2025-12-19 04:23:50] 2025-12-19 09:22:49,346 | INFO     | mean y: 2520107.2052401747
[2025-12-19 04:23:50] 2025-12-19 09:22:49,346 | INFO     | intersect: 11188522632.895918
[2025-12-19 04:23:50] 2025-12-19 09:22:49,346 | INFO     | chi2: 0.06428482837177604
[2025-12-19 04:23:50] 2025-12-19 09:22:49,346 | INFO     | current chi2=0.06428482837177604 (change=95.18607158504997 %)
[2025-12-19 04:23:50] 2025-12-19 09:22:49,347 | INFO     | sum of square deviations: 3485088600.0
[2025-12-19 04:23:50] 2025-12-19 09:22:49,348 | INFO     | sum of deviations: -21897642322.999996
[2025-12-19 04:23:50] 2025-12-19 09:22:49,348 | INFO     | mean x: 1766129296.5
[2025-12-19 04:23:50] 2025-12-19 09:22:49,349 | INFO     | mean y: 2518999.4464285714
[2025-12-19 04:23:50] 2025-12-19 09:22:49,349 | INFO     | intersect: 11099530315.293207
[2025-12-19 04:23:50] 2025-12-19 09:22:49,349 | INFO     | chi2: 0.050984027329668585
[2025-12-19 04:23:50] 2025-12-19 09:22:49,349 | INFO     | current chi2=0.050984027329668585 (change=20.690420086657824 %)
[2025-12-19 04:23:50] 2025-12-19 09:22:49,349 | INFO     | left removable region: 20
[2025-12-19 04:23:50] 2025-12-19 09:22:49,350 | INFO     | sum of square deviations: 2790348132.0
[2025-12-19 04:23:50] 2025-12-19 09:22:49,352 | INFO     | sum of deviations: -15968283570.5
[2025-12-19 04:23:50] 2025-12-19 09:22:49,352 | INFO     | mean x: 1766129418.5
[2025-12-19 04:23:50] 2025-12-19 09:22:49,352 | INFO     | mean y: 2515558.4375
[2025-12-19 04:23:50] 2025-12-19 09:22:49,352 | INFO     | intersect: 10109517997.805618
[2025-12-19 04:23:50] 2025-12-19 09:22:49,352 | INFO     | chi2: 0.0474300160279195
[2025-12-19 04:23:50] 2025-12-19 09:22:49,353 | INFO     | current memory leak: -5.72 B/s (using 208 data points, chi2=0.05)
[2025-12-19 04:23:50] 2025-12-19 09:22:49,353 | INFO     | could have reported an average CPU frequency of 2999 MHz (11 samples)
[2025-12-19 04:23:50] 2025-12-19 09:22:49,353 | INFO     | ..............................
[2025-12-19 04:23:50] 2025-12-19 09:22:49,354 | INFO     | . Timing measurements:
[2025-12-19 04:23:50] 2025-12-19 09:22:49,354 | INFO     | . get job = 0 s
[2025-12-19 04:23:50] 2025-12-19 09:22:49,354 | INFO     | . initial setup = 2 s
[2025-12-19 04:23:50] 2025-12-19 09:22:49,354 | INFO     | . payload setup = 4 s
[2025-12-19 04:23:50] 2025-12-19 09:22:49,354 | INFO     | . stage-in = 0 s
[2025-12-19 04:23:50] 2025-12-19 09:22:49,354 | INFO     | . payload execution = 14279 s
[2025-12-19 04:23:50] 2025-12-19 09:22:49,354 | INFO     | . stage-out = 2 s
[2025-12-19 04:23:50] 2025-12-19 09:22:49,355 | INFO     | . log creation = 0 s
[2025-12-19 04:23:50] 2025-12-19 09:22:49,355 | INFO     | ..............................
[2025-12-19 04:23:50] 2025-12-19 09:22:49,444 | INFO     | 
[2025-12-19 04:23:50] 2025-12-19 09:22:49,445 | INFO     | job summary report
[2025-12-19 04:23:50] 2025-12-19 09:22:49,445 | INFO     | --------------------------------------------------
[2025-12-19 04:23:50] 2025-12-19 09:22:49,445 | INFO     | PanDA job id: 6933078702
[2025-12-19 04:23:50] 2025-12-19 09:22:49,445 | INFO     | task id: 47898763
[2025-12-19 04:23:50] 2025-12-19 09:22:49,445 | INFO     | errors: (none)
[2025-12-19 04:23:50] 2025-12-19 09:22:49,446 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 04:23:50] 2025-12-19 09:22:49,446 | INFO     | pilot state: finished 
[2025-12-19 04:23:50] 2025-12-19 09:22:49,446 | INFO     | transexitcode: 0
[2025-12-19 04:23:50] 2025-12-19 09:22:49,446 | INFO     | exeerrorcode: 0
[2025-12-19 04:23:50] 2025-12-19 09:22:49,446 | INFO     | exeerrordiag: 
[2025-12-19 04:23:50] 2025-12-19 09:22:49,446 | INFO     | exitcode: 0
[2025-12-19 04:23:50] 2025-12-19 09:22:49,446 | INFO     | exitmsg: OK
[2025-12-19 04:23:50] 2025-12-19 09:22:49,447 | INFO     | cpuconsumptiontime: 108564 s
[2025-12-19 04:23:50] 2025-12-19 09:22:49,447 | INFO     | nevents: 400
[2025-12-19 04:23:50] 2025-12-19 09:22:49,447 | INFO     | neventsw: 0
[2025-12-19 04:23:50] 2025-12-19 09:22:49,447 | INFO     | pid: 31366
[2025-12-19 04:23:50] 2025-12-19 09:22:49,447 | INFO     | pgrp: 31366
[2025-12-19 04:23:50] 2025-12-19 09:22:49,447 | INFO     | corecount: 8
[2025-12-19 04:23:50] 2025-12-19 09:22:49,447 | INFO     | event service: False
[2025-12-19 04:23:50] 2025-12-19 09:22:49,448 | INFO     | sizes: {0: 2283787, 1: 2283986, 4: 2284248, 11: 2284276, 14287: 2314749, 14290: 2323747, 14291: 2323931, 14295: 2324125}
[2025-12-19 04:23:50] 2025-12-19 09:22:49,448 | INFO     | --------------------------------------------------
[2025-12-19 04:23:50] 2025-12-19 09:22:49,448 | INFO     | 
[2025-12-19 04:23:50] 2025-12-19 09:22:49,448 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-19 04:23:50] 2025-12-19 09:22:49,480 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 04:23:50] 2025-12-19 09:22:49,481 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 04:23:50] 2025-12-19 09:22:49,481 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 04:23:50] 2025-12-19 09:22:49,481 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 04:23:50] 2025-12-19 09:22:49,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 04:23:50] 2025-12-19 09:22:49,481 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 04:23:50] 2025-12-19 09:22:49,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 04:23:50] 2025-12-19 09:22:49,482 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 04:23:50] 2025-12-19 09:22:49,482 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 04:23:50] 2025-12-19 09:22:49,482 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 04:23:50] 2025-12-19 09:22:49,482 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 04:23:50] 2025-12-19 09:22:49,482 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 04:23:50] 2025-12-19 09:22:49,482 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 04:23:50] 2025-12-19 09:22:49,483 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 04:23:50] 2025-12-19 09:22:49,483 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 04:23:50] 2025-12-19 09:22:49,483 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 04:23:50] 2025-12-19 09:22:49,483 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 04:23:50] 2025-12-19 09:22:49,483 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 04:23:50] 2025-12-19 09:22:49,483 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 04:23:50] 2025-12-19 09:22:49,483 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 04:23:50] 2025-12-19 09:22:49,484 | INFO     | job 6933078702 has completed (purged errors)
[2025-12-19 04:23:50] 2025-12-19 09:22:49,484 | INFO     | overall cleanup function is called
[2025-12-19 04:23:50] 2025-12-19 09:22:50,492 | INFO     | --- collectZombieJob: --- 10, [31366]
[2025-12-19 04:23:50] 2025-12-19 09:22:50,493 | INFO     | zombie collector waiting for pid 31366
[2025-12-19 04:23:50] 2025-12-19 09:22:50,493 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 04:23:50] 2025-12-19 09:22:50,493 | INFO     | collected zombie processes
[2025-12-19 04:23:50] 2025-12-19 09:22:50,493 | INFO     | will attempt to kill all subprocesses of pid=31366
[2025-12-19 04:23:50] 2025-12-19 09:22:50,711 | INFO     | process IDs to be killed: [31366] (in reverse order)
[2025-12-19 04:23:50] 2025-12-19 09:22:50,793 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 04:23:50] 2025-12-19 09:22:50,793 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 04:23:50] 2025-12-19 09:22:50,801 | INFO     | did not find any defunct processes belonging to 31366
[2025-12-19 04:23:50] 2025-12-19 09:22:50,808 | INFO     | did not find any defunct processes belonging to 31366
[2025-12-19 04:23:50] 2025-12-19 09:22:50,809 | INFO     | ready for new job
[2025-12-19 04:23:50] 2025-12-19 09:22:50,809 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 04:23:50] 2025-12-19 09:22:50,811 | INFO     | ***************************************
[2025-12-19 04:23:50] 2025-12-19 09:22:50,811 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 04:23:50] 2025-12-19 09:22:50,811 | INFO     | ***************************************
[2025-12-19 04:23:50] 2025-12-19 09:22:50,812 | INFO     | 
[2025-12-19 04:23:50] 2025-12-19 09:22:50,813 | INFO     | architecture information:
[2025-12-19 04:23:50] 2025-12-19 09:22:50,814 | INFO     | executing command: cat /etc/os-release
[2025-12-19 04:23:50] 2025-12-19 09:22:50,828 | INFO     | cat /etc/os-release:
[2025-12-19 04:23:50] NAME="CentOS Linux"
[2025-12-19 04:23:50] VERSION="7 (Core)"
[2025-12-19 04:23:50] ID="centos"
[2025-12-19 04:23:50] ID_LIKE="rhel fedora"
[2025-12-19 04:23:50] VERSION_ID="7"
[2025-12-19 04:23:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 04:23:50] ANSI_COLOR="0;31"
[2025-12-19 04:23:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 04:23:50] HOME_URL="https://www.centos.org/"
[2025-12-19 04:23:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 04:23:50] 
[2025-12-19 04:23:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 04:23:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 04:23:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 04:23:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 04:23:50] 
[2025-12-19 04:23:50] 2025-12-19 09:22:50,828 | INFO     | ***************************************
[2025-12-19 04:23:50] 2025-12-19 09:22:51,335 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-19 04:23:50] 2025-12-19 09:22:51,353 | INFO     | sufficient remaining disk space (103825801216 B)
[2025-12-19 04:23:50] 2025-12-19 09:22:51,353 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 04:23:50] 2025-12-19 09:22:51,354 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 04:23:50] 2025-12-19 09:22:51,354 | INFO     | update_server=False
[2025-12-19 04:23:50] 2025-12-19 09:22:51,354 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 04:23:50] 2025-12-19 09:22:51,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 04:23:50] 2025-12-19 09:22:51,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 04:23:50] 2025-12-19 09:22:51,746 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-19 04:23:50] 2025-12-19 09:22:51,746 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-19 04:23:50] 2025-12-19 09:22:51,747 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 04:23:50] 2025-12-19 09:22:51,747 | INFO     | will abort loop
[2025-12-19 04:23:50] 2025-12-19 09:22:51,858 | INFO     | all job control threads have been joined
[2025-12-19 04:23:50] 2025-12-19 09:22:51,973 | INFO     | all payload control threads have been joined
[2025-12-19 04:23:50] 2025-12-19 09:22:52,023 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 04:23:50] 2025-12-19 09:22:52,260 | INFO     | all data control threads have been joined
[2025-12-19 04:23:50] 2025-12-19 09:22:52,360 | INFO     | [job] retrieve thread has finished
[2025-12-19 04:23:50] 2025-12-19 09:22:52,361 | INFO     | [job] queue monitor thread has finished
[2025-12-19 04:23:50] 2025-12-19 09:22:52,752 | INFO     | [job] job monitor thread has finished
[2025-12-19 04:23:50] 2025-12-19 09:22:52,825 | INFO     | [job] validate thread has finished
[2025-12-19 04:23:50] 2025-12-19 09:22:52,863 | INFO     | [job] control thread has finished
[2025-12-19 04:23:50] 2025-12-19 09:22:52,978 | INFO     | [payload] control thread has finished
[2025-12-19 04:23:50] 2025-12-19 09:22:53,124 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 04:23:50] 2025-12-19 09:22:53,265 | INFO     | [data] control thread has finished
[2025-12-19 04:23:50] 2025-12-19 09:22:53,480 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 04:23:50] 2025-12-19 09:22:53,515 | INFO     | [payload] failed_post thread has finished
[2025-12-19 04:23:50] 2025-12-19 09:22:53,572 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 04:23:50] 2025-12-19 09:22:53,683 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 04:23:50] 2025-12-19 09:22:53,722 | INFO     | [data] copytool_in thread has finished
[2025-12-19 04:23:50] 2025-12-19 09:22:53,932 | INFO     | [payload] validate_post thread has finished
[2025-12-19 04:23:50] 2025-12-19 09:22:54,029 | INFO     | [data] copytool_out thread has finished
[2025-12-19 04:23:50] 2025-12-19 09:22:55,638 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 04:23:50] 2025-12-19 09:23:21,747 | INFO     | PID=24172 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-19 04:23:50] 2025-12-19 09:23:21,747 | INFO     | .. there are 4 such processes running
[2025-12-19 04:23:50] 2025-12-19 09:23:21,747 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 04:23:50] 2025-12-19 09:23:21,747 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 04:23:50] 2025-12-19 09:23:21,748 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 04:23:50] 2025-12-19 09:23:42,583 | INFO     | [monitor] cgroup control has ended
[2025-12-19 04:23:50] 2025-12-19 09:23:44,560 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140220299056960)>', '<ExcThread(monitor, started 140219844114176)>']
[2025-12-19 04:23:50] 2025-12-19 09:23:44,867 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 04:23:50] 2025-12-19 09:23:44,868 | INFO     | [monitor] control thread has ended
[2025-12-19 04:23:50] 2025-12-19 09:23:49,586 | INFO     | all workflow threads have been joined
[2025-12-19 04:23:50] 2025-12-19 09:23:49,587 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 04:23:50] 2025-12-19 09:23:49,587 | INFO     | traces error code: 0
[2025-12-19 04:23:50] 2025-12-19 09:23:49,587 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 04:23:50] 2025-12-19 09:23:49,743 [wrapper] ==== pilot stdout END ====
[2025-12-19 04:23:50] 2025-12-19 09:23:49,745 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 04:23:50] 2025-12-19 09:23:49,747 [wrapper] pilotpid: 24172
[2025-12-19 04:23:50] 2025-12-19 09:23:49,749 [wrapper] Pilot exit status: 0
[2025-12-19 04:23:50] 2025-12-19 09:23:49,759 [wrapper] pandaids: 6933078702
[2025-12-19 04:23:50] 2025-12-19 09:23:49,813 [wrapper] cleanup supervisor_pilot 48623 24173
[2025-12-19 04:23:50] 2025-12-19 09:23:49,816 [wrapper] Test setup, not cleaning
[2025-12-19 04:23:50] 2025-12-19 09:23:49,824 [wrapper] apfmon messages muted
[2025-12-19 04:23:50] 2025-12-19 09:23:49,827 [wrapper] ==== wrapper stdout END ====
[2025-12-19 04:23:50] 2025-12-19 09:23:49,829 [wrapper] ==== wrapper stderr END ====
[2025-12-19 04:23:50]  *** Error codes and diagnostics ***
[2025-12-19 04:23:50]     "exeErrorCode": 0,
[2025-12-19 04:23:50]     "exeErrorDiag": "",
[2025-12-19 04:23:50]     "pilotErrorCode": 0,
[2025-12-19 04:23:50]     "pilotErrorDiag": "",
[2025-12-19 04:23:50]  *** Listing of results directory ***
[2025-12-19 04:23:50] total 446164
[2025-12-19 04:23:50] -rw-r--r-- 1 boincer umatlas    579449 Dec 18 00:16 pilot3.tar.gz
[2025-12-19 04:23:50] -rw-r--r-- 1 boincer umatlas      5112 Dec 18 00:19 queuedata.json
[2025-12-19 04:23:50] -rwx------ 1 boincer umatlas     36322 Dec 18 00:20 runpilot2-wrapper.sh
[2025-12-19 04:23:50] -rw-r--r-- 1 boincer umatlas       100 Dec 19 00:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 04:23:50] -rwxr-xr-x 1 boincer umatlas      7986 Dec 19 00:24 run_atlas
[2025-12-19 04:23:50] -rw-r--r-- 1 boincer umatlas       105 Dec 19 00:24 job.xml
[2025-12-19 04:23:50] -rw-r--r-- 2 boincer umatlas 225682181 Dec 19 00:24 EVNT.47898761._000883.pool.root.1
[2025-12-19 04:23:50] -rw-r--r-- 2 boincer umatlas     15847 Dec 19 00:24 start_atlas.sh
[2025-12-19 04:23:50] drwxrwx--x 2 boincer umatlas      4096 Dec 19 00:24 shared
[2025-12-19 04:23:50] -rw-r--r-- 2 boincer umatlas    592405 Dec 19 00:24 input.tar.gz
[2025-12-19 04:23:50] -rw-r--r-- 1 boincer umatlas         0 Dec 19 00:24 boinc_lockfile
[2025-12-19 04:23:50] -rw-r--r-- 1 boincer umatlas      2508 Dec 19 00:24 pandaJob.out
[2025-12-19 04:23:50] -rw------- 1 boincer umatlas        57 Dec 19 00:24 setup.sh.local
[2025-12-19 04:23:50] -rw------- 1 boincer umatlas    988888 Dec 19 00:24 agis_schedconf.cvmfs.json
[2025-12-19 04:23:50] drwx------ 5 boincer umatlas      4096 Dec 19 00:24 pilot3
[2025-12-19 04:23:50] -rw-r--r-- 1 boincer umatlas      6037 Dec 19 04:18 init_data.xml
[2025-12-19 04:23:50] -rw------- 1 boincer umatlas 222396420 Dec 19 04:22 HITS.47898763._022961.pool.root.1
[2025-12-19 04:23:50] -rw-r--r-- 1 boincer umatlas       531 Dec 19 04:22 boinc_task_state.xml
[2025-12-19 04:23:50] -rw------- 1 boincer umatlas        95 Dec 19 04:22 pilot_heartbeat.json
[2025-12-19 04:23:50] -rw------- 1 boincer umatlas      1049 Dec 19 04:22 memory_monitor_summary.json
[2025-12-19 04:23:50] -rw------- 1 boincer umatlas   1516240 Dec 19 04:22 agis_ddmendpoints.agis.ALL.json
[2025-12-19 04:23:50] -rw------- 1 boincer umatlas    470410 Dec 19 04:22 log.47898763._022961.job.log.tgz.1
[2025-12-19 04:23:50] -rw------- 1 boincer umatlas      7839 Dec 19 04:22 heartbeat.json
[2025-12-19 04:23:50] -rw-r--r-- 1 boincer umatlas      8192 Dec 19 04:23 boinc_mmap_file
[2025-12-19 04:23:50] -rw-r--r-- 1 boincer umatlas        29 Dec 19 04:23 wrapper_checkpoint.txt
[2025-12-19 04:23:50] -rw------- 1 boincer umatlas      5008 Dec 19 04:23 pilotlog.txt
[2025-12-19 04:23:50] -rw------- 1 boincer umatlas   1968572 Dec 19 04:23 log.47898763._022961.job.log.1
[2025-12-19 04:23:50] -rw------- 1 boincer umatlas       357 Dec 19 04:23 output.list
[2025-12-19 04:23:50] -rw-r--r-- 1 boincer umatlas       620 Dec 19 04:23 runtime_log
[2025-12-19 04:23:50] -rw------- 1 boincer umatlas   2457600 Dec 19 04:23 result.tar.gz
[2025-12-19 04:23:50] -rw-r--r-- 1 boincer umatlas      9333 Dec 19 04:23 runtime_log.err
[2025-12-19 04:23:50] -rw------- 1 boincer umatlas       660 Dec 19 04:23 AcaKDmubLq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1adKDmvHWrXo.diag
[2025-12-19 04:23:50] -rw-r--r-- 1 boincer umatlas     21381 Dec 19 04:23 stderr.txt
[2025-12-19 04:23:50] HITS file was successfully produced:
[2025-12-19 04:23:50] -rw------- 1 boincer umatlas 222396420 Dec 19 04:22 shared/HITS.pool.root.1
[2025-12-19 04:23:50]  *** Contents of shared directory: ***
[2025-12-19 04:23:50] total 440584
[2025-12-19 04:23:50] -rw-r--r-- 2 boincer umatlas 225682181 Dec 19 00:24 ATLAS.root_0
[2025-12-19 04:23:50] -rw-r--r-- 2 boincer umatlas     15847 Dec 19 00:24 start_atlas.sh
[2025-12-19 04:23:50] -rw-r--r-- 2 boincer umatlas    592405 Dec 19 00:24 input.tar.gz
[2025-12-19 04:23:50] -rw------- 1 boincer umatlas 222396420 Dec 19 04:22 HITS.pool.root.1
[2025-12-19 04:23:50] -rw------- 1 boincer umatlas   2457600 Dec 19 04:23 result.tar.gz
04:23:52 (20483): run_atlas exited; CPU time 108917.472345
04:23:52 (20483): called boinc_finish(0)

</stderr_txt>
]]>

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