Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:46:57 (2798685): wrapper (7.7.26015): starting
00:46:57 (2798685): wrapper: running run_atlas (--nthreads 3)
[2025-12-20 00:46:57] Arguments: --nthreads 3
[2025-12-20 00:46:57] Threads: 3
[2025-12-20 00:46:57] Checking for CVMFS
[2025-12-20 00:46:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-20 00:46:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-20 00:46:57] Running cvmfs_config stat atlas.cern.ch
[2025-12-20 00:46:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-20 00:46:57] 2.9.2.0 415797 9209 89828 154206 2 57 21206892 36864001 0 130560 0 6140165 99.990 330363 18523 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-20 00:46:57] CVMFS is ok
[2025-12-20 00:46:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-20 00:46:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-20 00:46:57] Further information can be found at the LHC@home message board.
[2025-12-20 00:46:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-20 00:46:57] Checking for apptainer binary...
[2025-12-20 00:46:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-20 00:46:57] Running /usr/bin/apptainer --version
[2025-12-20 00:46:57] apptainer version 1.4.1-1.1
[2025-12-20 00:46:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-20 00:46:57] magicA246a
[2025-12-20 00:46:57] apptainer works
[2025-12-20 00:46:57] Set ATHENA_PROC_NUMBER=3
[2025-12-20 00:46:57] Set ATHENA_CORE_NUMBER=3
[2025-12-20 00:46:57] Starting ATLAS job with PandaID=6934552722
[2025-12-20 00:46:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-20 02:42:15]  *** The last 200 lines of the pilot log: ***
[2025-12-20 02:42:15] 2025-12-20 01:41:39,404 | INFO     | executing command: cat /etc/os-release
[2025-12-20 02:42:15] 2025-12-20 01:41:39,413 | INFO     | cat /etc/os-release:
[2025-12-20 02:42:15] NAME="CentOS Linux"
[2025-12-20 02:42:15] VERSION="7 (Core)"
[2025-12-20 02:42:15] ID="centos"
[2025-12-20 02:42:15] ID_LIKE="rhel fedora"
[2025-12-20 02:42:15] VERSION_ID="7"
[2025-12-20 02:42:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-20 02:42:15] ANSI_COLOR="0;31"
[2025-12-20 02:42:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-20 02:42:15] HOME_URL="https://www.centos.org/"
[2025-12-20 02:42:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-20 02:42:15] 
[2025-12-20 02:42:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-20 02:42:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-20 02:42:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-20 02:42:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-20 02:42:15] 
[2025-12-20 02:42:15] 2025-12-20 01:41:39,413 | INFO     | ***************************************
[2025-12-20 02:42:15] 2025-12-20 01:41:39,916 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-20 02:42:15] 2025-12-20 01:41:39,929 | INFO     | sufficient remaining disk space (283987935232 B)
[2025-12-20 02:42:15] 2025-12-20 01:41:39,929 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-20 02:42:15] 2025-12-20 01:41:39,929 | INFO     | current server update state: UPDATING_FINAL
[2025-12-20 02:42:15] 2025-12-20 01:41:39,929 | INFO     | update_server=False
[2025-12-20 02:42:15] 2025-12-20 01:41:39,929 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-20 02:42:15] 2025-12-20 01:41:39,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-20 02:42:15] 2025-12-20 01:41:39,930 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-20 02:42:15] 2025-12-20 01:41:39,930 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-20 02:42:15] 2025-12-20 01:41:39,930 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-20 02:42:15] 2025-12-20 01:41:39,930 | INFO     | aborting loop
[2025-12-20 02:42:15] 2025-12-20 01:41:39,930 | INFO     | found 0 job(s) in 20 queues
[2025-12-20 02:42:15] 2025-12-20 01:41:39,930 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-20 02:42:15] 2025-12-20 01:41:39,930 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-20 02:42:15] 2025-12-20 01:41:40,358 | INFO     | all data control threads have been joined
[2025-12-20 02:42:15] 2025-12-20 01:41:40,573 | INFO     | all payload control threads have been joined
[2025-12-20 02:42:15] 2025-12-20 01:41:40,935 | INFO     | [job] retrieve thread has finished
[2025-12-20 02:42:15] 2025-12-20 01:41:40,935 | INFO     | [job] queue monitor thread has finished
[2025-12-20 02:42:15] 2025-12-20 01:41:40,936 | INFO     | [job] job monitor thread has finished
[2025-12-20 02:42:15] 2025-12-20 01:41:40,993 | INFO     | [payload] validate_pre thread has finished
[2025-12-20 02:42:15] 2025-12-20 01:41:41,124 | INFO     | all job control threads have been joined
[2025-12-20 02:42:15] 2025-12-20 01:41:41,216 | INFO     | [payload] execute_payloads thread has finished
[2025-12-20 02:42:15] 2025-12-20 01:41:41,364 | INFO     | [data] control thread has finished
[2025-12-20 02:42:15] 2025-12-20 01:41:41,579 | INFO     | [payload] control thread has finished
[2025-12-20 02:42:15] 2025-12-20 01:41:41,850 | INFO     | [payload] validate_post thread has finished
[2025-12-20 02:42:15] 2025-12-20 01:41:41,936 | INFO     | [data] copytool_out thread has finished
[2025-12-20 02:42:15] 2025-12-20 01:41:41,941 | INFO     | [data] copytool_in thread has finished
[2025-12-20 02:42:15] 2025-12-20 01:41:41,970 | INFO     | [payload] failed_post thread has finished
[2025-12-20 02:42:15] 2025-12-20 01:41:42,130 | INFO     | [job] control thread has finished
[2025-12-20 02:42:15] 2025-12-20 01:41:42,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-20 02:42:15] 2025-12-20 01:41:42,297 | INFO     | [job] validate thread has finished
[2025-12-20 02:42:15] 2025-12-20 01:41:42,421 | INFO     | [job] create_data_payload thread has finished
[2025-12-20 02:42:15] 2025-12-20 01:41:46,246 | INFO     | [data] queue_monitor thread has finished
[2025-12-20 02:42:15] 2025-12-20 01:41:50,338 | INFO     | job.realtimelogging is not enabled
[2025-12-20 02:42:15] 2025-12-20 01:41:51,344 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-20 02:42:15] 2025-12-20 01:42:09,773 | INFO     | [monitor] cgroup control has ended
[2025-12-20 02:42:15] 2025-12-20 01:42:10,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140601573799744)>', '<ExcThread(monitor, started 140601215395584)>']
[2025-12-20 02:42:15] 2025-12-20 01:42:11,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-20 02:42:15] 2025-12-20 01:42:11,087 | INFO     | [monitor] control thread has ended
[2025-12-20 02:42:15] 2025-12-20 01:42:15,123 | INFO     | all workflow threads have been joined
[2025-12-20 02:42:15] 2025-12-20 01:42:15,123 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-20 02:42:15] 2025-12-20 01:42:15,123 | INFO     | traces error code: 0
[2025-12-20 02:42:15] 2025-12-20 01:42:15,123 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-20 02:42:15] 2025-12-20 01:42:15,173 [wrapper] ==== pilot stdout END ====
[2025-12-20 02:42:15] 2025-12-20 01:42:15,175 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-20 02:42:15] 2025-12-20 01:42:15,178 [wrapper] pilotpid: 2802417
[2025-12-20 02:42:15] 2025-12-20 01:42:15,180 [wrapper] Pilot exit status: 0
[2025-12-20 02:42:15] 2025-12-20 01:42:15,187 [wrapper] pandaids: 6934552722
[2025-12-20 02:42:15] 2025-12-20 01:42:15,207 [wrapper] cleanup supervisor_pilot 2824648 2802418
[2025-12-20 02:42:15] 2025-12-20 01:42:15,210 [wrapper] Test setup, not cleaning
[2025-12-20 02:42:15] 2025-12-20 01:42:15,212 [wrapper] apfmon messages muted
[2025-12-20 02:42:15] 2025-12-20 01:42:15,214 [wrapper] ==== wrapper stdout END ====
[2025-12-20 02:42:15] 2025-12-20 01:42:15,217 [wrapper] ==== wrapper stderr END ====
[2025-12-20 02:42:15]  *** Error codes and diagnostics ***
[2025-12-20 02:42:15]     "exeErrorCode": 0,
[2025-12-20 02:42:15]     "exeErrorDiag": "",
[2025-12-20 02:42:15]     "pilotErrorCode": 0,
[2025-12-20 02:42:15]     "pilotErrorDiag": "",
[2025-12-20 02:42:15]  *** Listing of results directory ***
[2025-12-20 02:42:15] total 436580
[2025-12-20 02:42:15] -rw-r--r-- 1 boinc boinc    579449 Dec 19 00:10 pilot3.tar.gz
[2025-12-20 02:42:15] -rw-r--r-- 1 boinc boinc      5112 Dec 19 00:11 queuedata.json
[2025-12-20 02:42:15] -rwx------ 1 boinc boinc     36322 Dec 19 00:12 runpilot2-wrapper.sh
[2025-12-20 02:42:15] -rw-r--r-- 1 boinc boinc       100 Dec 20 00:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-20 02:42:15] -rwxr-xr-x 1 boinc boinc      7986 Dec 20 00:46 run_atlas
[2025-12-20 02:42:15] -rw-r--r-- 1 boinc boinc       105 Dec 20 00:46 job.xml
[2025-12-20 02:42:15] -rw-r--r-- 2 boinc boinc 222280675 Dec 20 00:46 EVNT.47898761._000993.pool.root.1
[2025-12-20 02:42:15] -rw-r--r-- 2 boinc boinc    592404 Dec 20 00:46 input.tar.gz
[2025-12-20 02:42:15] -rw-r--r-- 2 boinc boinc     15847 Dec 20 00:46 start_atlas.sh
[2025-12-20 02:42:15] drwxrwx--x 2 boinc boinc      4096 Dec 20 00:46 shared
[2025-12-20 02:42:15] -rw-r--r-- 1 boinc boinc         0 Dec 20 00:46 boinc_setup_complete
[2025-12-20 02:42:15] -rw-r--r-- 1 boinc boinc      6447 Dec 20 00:46 init_data.xml
[2025-12-20 02:42:15] -rw-r--r-- 1 boinc boinc         0 Dec 20 00:46 boinc_lockfile
[2025-12-20 02:42:15] -rw-r--r-- 1 boinc boinc      2508 Dec 20 00:46 pandaJob.out
[2025-12-20 02:42:15] -rw------- 1 boinc boinc    988138 Dec 20 00:47 agis_schedconf.cvmfs.json
[2025-12-20 02:42:15] -rw------- 1 boinc boinc   1516240 Dec 20 00:47 agis_ddmendpoints.agis.ALL.json
[2025-12-20 02:42:15] drwx------ 5 boinc boinc      4096 Dec 20 00:47 pilot3
[2025-12-20 02:42:15] -rw------- 1 boinc boinc        95 Dec 20 02:40 pilot_heartbeat.json
[2025-12-20 02:42:15] -rw------- 1 boinc boinc 218311549 Dec 20 02:41 HITS.47898763._025790.pool.root.1
[2025-12-20 02:42:15] -rw-r--r-- 1 boinc boinc       530 Dec 20 02:41 boinc_task_state.xml
[2025-12-20 02:42:15] -rw------- 1 boinc boinc      1031 Dec 20 02:41 memory_monitor_summary.json
[2025-12-20 02:42:15] -rw------- 1 boinc boinc    290105 Dec 20 02:41 log.47898763._025790.job.log.tgz.1
[2025-12-20 02:42:15] -rw------- 1 boinc boinc      7773 Dec 20 02:41 heartbeat.json
[2025-12-20 02:42:15] -rw-r--r-- 1 boinc boinc        27 Dec 20 02:42 wrapper_checkpoint.txt
[2025-12-20 02:42:15] -rw-r--r-- 1 boinc boinc      8192 Dec 20 02:42 boinc_mmap_file
[2025-12-20 02:42:15] -rw------- 1 boinc boinc      4628 Dec 20 02:42 pilotlog.txt
[2025-12-20 02:42:15] -rw------- 1 boinc boinc    992105 Dec 20 02:42 log.47898763._025790.job.log.1
[2025-12-20 02:42:15] -rw------- 1 boinc boinc       357 Dec 20 02:42 output.list
[2025-12-20 02:42:15] -rw-r--r-- 1 boinc boinc       620 Dec 20 02:42 runtime_log
[2025-12-20 02:42:15] -rw------- 1 boinc boinc   1300480 Dec 20 02:42 result.tar.gz
[2025-12-20 02:42:15] -rw-r--r-- 1 boinc boinc      8917 Dec 20 02:42 runtime_log.err
[2025-12-20 02:42:15] -rw------- 1 boinc boinc       664 Dec 20 02:42 m5ZKDmcLcq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMzeKDmVWt5om.diag
[2025-12-20 02:42:15] -rw-r--r-- 1 boinc boinc      8905 Dec 20 02:42 stderr.txt
[2025-12-20 02:42:15] HITS file was successfully produced:
[2025-12-20 02:42:15] -rw------- 1 boinc boinc 218311549 Dec 20 02:41 shared/HITS.pool.root.1
[2025-12-20 02:42:15]  *** Contents of shared directory: ***
[2025-12-20 02:42:15] total 432144
[2025-12-20 02:42:15] -rw-r--r-- 2 boinc boinc 222280675 Dec 20 00:46 ATLAS.root_0
[2025-12-20 02:42:15] -rw-r--r-- 2 boinc boinc    592404 Dec 20 00:46 input.tar.gz
[2025-12-20 02:42:15] -rw-r--r-- 2 boinc boinc     15847 Dec 20 00:46 start_atlas.sh
[2025-12-20 02:42:15] -rw------- 1 boinc boinc 218311549 Dec 20 02:41 HITS.pool.root.1
[2025-12-20 02:42:15] -rw------- 1 boinc boinc   1300480 Dec 20 02:42 result.tar.gz
02:42:17 (2798685): run_atlas exited; CPU time 19804.575377
02:42:17 (2798685): called boinc_finish(0)

</stderr_txt>
]]>

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