Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:45:23 (30422): wrapper (7.7.26015): starting
10:45:23 (30422): wrapper: running run_atlas (--nthreads 8)
[2025-12-19 10:45:23] Arguments: --nthreads 8
[2025-12-19 10:45:23] Threads: 8
[2025-12-19 10:45:23] Checking for CVMFS
[2025-12-19 10:45:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 10:45:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 10:45:24] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 10:45:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 10:45:26] 2.11.2.0 6904 5013 78588 154183 1 238 18550122 25165825 2113 130560 0 3411086 99.831 2043689 2149 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-19 10:45:26] CVMFS is ok
[2025-12-19 10:45:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 10:45:26] Checking for apptainer binary...
[2025-12-19 10:45:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 10:45:26] Running /usr/bin/apptainer --version
[2025-12-19 10:45:26] apptainer version 1.3.2-1.el7
[2025-12-19 10:45:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 10:45:45] cg-vwn474.simple-grid.lan
[2025-12-19 10:45:45] apptainer works
[2025-12-19 10:45:45] Set ATHENA_PROC_NUMBER=8
[2025-12-19 10:45:45] Set ATHENA_CORE_NUMBER=8
[2025-12-19 10:45:45] Starting ATLAS job with PandaID=6933049056
[2025-12-19 10:45:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 14:45:53]  *** The last 200 lines of the pilot log: ***
[2025-12-19 14:45:53] 2025-12-19 13:45:12,774 | INFO     | monitor loop #1017: job 0:6933049056 is in state 'finished'
[2025-12-19 14:45:53] 2025-12-19 13:45:12,775 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 14:45:53] 2025-12-19 13:45:14,286 | INFO     | time since job start (14151s) is within the limit (174528.0s)
[2025-12-19 14:45:53] 2025-12-19 13:45:15,279 | INFO     | monitor loop #1018: job 0:6933049056 is in state 'finished'
[2025-12-19 14:45:53] 2025-12-19 13:45:15,279 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 14:45:53] 2025-12-19 13:45:15,796 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-19 14:45:53] 2025-12-19 13:45:15,798 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-12-19 14:45:53] 2025-12-19 13:45:15,799 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6933049056/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 14:45:53] 2025-12-19 13:45:15,800 | INFO     | extracted standard info from prmon json
[2025-12-19 14:45:53] 2025-12-19 13:45:15,800 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 14:45:53] 2025-12-19 13:45:15,800 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 14:45:53] 2025-12-19 13:45:15,801 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 14:45:53] 2025-12-19 13:45:15,801 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 14:45:53] 2025-12-19 13:45:15,806 | INFO     | fitting pss+swap vs Time
[2025-12-19 14:45:53] 2025-12-19 13:45:15,807 | INFO     | sum of square deviations: 3531973200.0
[2025-12-19 14:45:53] 2025-12-19 13:45:15,808 | INFO     | sum of deviations: 39341929138.0
[2025-12-19 14:45:53] 2025-12-19 13:45:15,809 | INFO     | mean x: 1766145050.0
[2025-12-19 14:45:53] 2025-12-19 13:45:15,809 | INFO     | mean y: 2479021.2044444443
[2025-12-19 14:45:53] 2025-12-19 13:45:15,809 | INFO     | intersect: -19670250490.03009
[2025-12-19 14:45:53] 2025-12-19 13:45:15,809 | INFO     | chi2: 3.7219546619168025
[2025-12-19 14:45:53] 2025-12-19 13:45:15,810 | INFO     | sum of square deviations: 3301699115.0
[2025-12-19 14:45:53] 2025-12-19 13:45:15,812 | INFO     | sum of deviations: 53204695167.50001
[2025-12-19 14:45:53] 2025-12-19 13:45:15,812 | INFO     | mean x: 1766144897.5
[2025-12-19 14:45:53] 2025-12-19 13:45:15,812 | INFO     | mean y: 2488022.0863636364
[2025-12-19 14:45:53] 2025-12-19 13:45:15,812 | INFO     | intersect: -28457767628.169353
[2025-12-19 14:45:53] 2025-12-19 13:45:15,813 | INFO     | chi2: 2.966536629289524
[2025-12-19 14:45:53] 2025-12-19 13:45:15,813 | INFO     | current chi2=2.966536629289524 (change=20.29627175088261 %)
[2025-12-19 14:45:53] 2025-12-19 13:45:15,813 | INFO     | right removable region: 219
[2025-12-19 14:45:53] 2025-12-19 13:45:15,813 | INFO     | sum of square deviations: 3301699115.0
[2025-12-19 14:45:53] 2025-12-19 13:45:15,815 | INFO     | sum of deviations: -18666523837.5
[2025-12-19 14:45:53] 2025-12-19 13:45:15,815 | INFO     | mean x: 1766145202.5
[2025-12-19 14:45:53] 2025-12-19 13:45:15,816 | INFO     | mean y: 2517252.9681818183
[2025-12-19 14:45:53] 2025-12-19 13:45:15,816 | INFO     | intersect: 9987615947.50883
[2025-12-19 14:45:53] 2025-12-19 13:45:15,816 | INFO     | chi2: 0.906489458781952
[2025-12-19 14:45:53] 2025-12-19 13:45:15,816 | INFO     | current chi2=0.906489458781952 (change=75.64480115630664 %)
[2025-12-19 14:45:53] 2025-12-19 13:45:15,817 | INFO     | sum of square deviations: 3081657780.0
[2025-12-19 14:45:53] 2025-12-19 13:45:15,818 | INFO     | sum of deviations: -19652356458.0
[2025-12-19 14:45:53] 2025-12-19 13:45:15,819 | INFO     | mean x: 1766145355.0
[2025-12-19 14:45:53] 2025-12-19 13:45:15,819 | INFO     | mean y: 2517876.0279069766
[2025-12-19 14:45:53] 2025-12-19 13:45:15,819 | INFO     | intersect: 11265584884.429129
[2025-12-19 14:45:53] 2025-12-19 13:45:15,819 | INFO     | chi2: 0.8704697559208814
[2025-12-19 14:45:53] 2025-12-19 13:45:15,820 | INFO     | current chi2=0.8704697559208814 (change=3.9735379724624917 %)
[2025-12-19 14:45:53] 2025-12-19 13:45:15,820 | INFO     | left removable region: 20
[2025-12-19 14:45:53] 2025-12-19 13:45:15,820 | INFO     | sum of square deviations: 2443580700.0
[2025-12-19 14:45:53] 2025-12-19 13:45:15,822 | INFO     | sum of deviations: 6447869397.0
[2025-12-19 14:45:53] 2025-12-19 13:45:15,822 | INFO     | mean x: 1766145477.0
[2025-12-19 14:45:53] 2025-12-19 13:45:15,822 | INFO     | mean y: 2519181.4673366835
[2025-12-19 14:45:53] 2025-12-19 13:45:15,822 | INFO     | intersect: -4657803832.132446
[2025-12-19 14:45:53] 2025-12-19 13:45:15,822 | INFO     | chi2: 0.0012501216189158679
[2025-12-19 14:45:53] 2025-12-19 13:45:15,823 | INFO     | current memory leak: 2.64 B/s (using 199 data points, chi2=0.00)
[2025-12-19 14:45:53] 2025-12-19 13:45:15,823 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2025-12-19 14:45:53] 2025-12-19 13:45:15,823 | INFO     | ..............................
[2025-12-19 14:45:53] 2025-12-19 13:45:15,823 | INFO     | . Timing measurements:
[2025-12-19 14:45:53] 2025-12-19 13:45:15,824 | INFO     | . get job = 0 s
[2025-12-19 14:45:53] 2025-12-19 13:45:15,824 | INFO     | . initial setup = 7 s
[2025-12-19 14:45:53] 2025-12-19 13:45:15,824 | INFO     | . payload setup = 128 s
[2025-12-19 14:45:53] 2025-12-19 13:45:15,824 | INFO     | . stage-in = 0 s
[2025-12-19 14:45:53] 2025-12-19 13:45:15,824 | INFO     | . payload execution = 13820 s
[2025-12-19 14:45:53] 2025-12-19 13:45:15,824 | INFO     | . stage-out = 1 s
[2025-12-19 14:45:53] 2025-12-19 13:45:15,824 | INFO     | . log creation = 0 s
[2025-12-19 14:45:53] 2025-12-19 13:45:15,824 | INFO     | ..............................
[2025-12-19 14:45:53] 2025-12-19 13:45:15,945 | INFO     | 
[2025-12-19 14:45:53] 2025-12-19 13:45:15,945 | INFO     | job summary report
[2025-12-19 14:45:53] 2025-12-19 13:45:15,945 | INFO     | --------------------------------------------------
[2025-12-19 14:45:53] 2025-12-19 13:45:15,945 | INFO     | PanDA job id: 6933049056
[2025-12-19 14:45:53] 2025-12-19 13:45:15,945 | INFO     | task id: 47929408
[2025-12-19 14:45:53] 2025-12-19 13:45:15,945 | INFO     | errors: (none)
[2025-12-19 14:45:53] 2025-12-19 13:45:15,946 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 14:45:53] 2025-12-19 13:45:15,946 | INFO     | pilot state: finished 
[2025-12-19 14:45:53] 2025-12-19 13:45:15,946 | INFO     | transexitcode: 0
[2025-12-19 14:45:53] 2025-12-19 13:45:15,946 | INFO     | exeerrorcode: 0
[2025-12-19 14:45:53] 2025-12-19 13:45:15,946 | INFO     | exeerrordiag: 
[2025-12-19 14:45:53] 2025-12-19 13:45:15,946 | INFO     | exitcode: 0
[2025-12-19 14:45:53] 2025-12-19 13:45:15,946 | INFO     | exitmsg: OK
[2025-12-19 14:45:53] 2025-12-19 13:45:15,946 | INFO     | cpuconsumptiontime: 50795 s
[2025-12-19 14:45:53] 2025-12-19 13:45:15,946 | INFO     | nevents: 400
[2025-12-19 14:45:53] 2025-12-19 13:45:15,947 | INFO     | neventsw: 0
[2025-12-19 14:45:53] 2025-12-19 13:45:15,947 | INFO     | pid: 8458
[2025-12-19 14:45:53] 2025-12-19 13:45:15,947 | INFO     | pgrp: 8458
[2025-12-19 14:45:53] 2025-12-19 13:45:15,947 | INFO     | corecount: 8
[2025-12-19 14:45:53] 2025-12-19 13:45:15,947 | INFO     | event service: False
[2025-12-19 14:45:53] 2025-12-19 13:45:15,947 | INFO     | sizes: {0: 2283868, 1: 2284067, 12: 2284067, 22: 2284095, 33: 2284123, 44: 2284179, 54: 2284335, 65: 2284363, 76: 2284391, 87: 2284447, 94: 2284737, 97: 2285045, 1
[2025-12-19 14:45:53] 2025-12-19 13:45:15,947 | INFO     | --------------------------------------------------
[2025-12-19 14:45:53] 2025-12-19 13:45:15,947 | INFO     | 
[2025-12-19 14:45:53] 2025-12-19 13:45:15,947 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-12-19 14:45:53] 2025-12-19 13:45:15,972 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 14:45:53] 2025-12-19 13:45:15,973 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 14:45:53] 2025-12-19 13:45:15,973 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 14:45:53] 2025-12-19 13:45:15,973 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 14:45:53] 2025-12-19 13:45:15,973 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 14:45:53] 2025-12-19 13:45:15,973 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 14:45:53] 2025-12-19 13:45:15,973 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 14:45:53] 2025-12-19 13:45:15,973 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 14:45:53] 2025-12-19 13:45:15,973 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 14:45:53] 2025-12-19 13:45:15,974 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 14:45:53] 2025-12-19 13:45:15,974 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 14:45:53] 2025-12-19 13:45:15,974 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 14:45:53] 2025-12-19 13:45:15,974 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 14:45:53] 2025-12-19 13:45:15,974 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 14:45:53] 2025-12-19 13:45:15,974 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 14:45:53] 2025-12-19 13:45:15,974 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 14:45:53] 2025-12-19 13:45:15,974 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 14:45:53] 2025-12-19 13:45:15,974 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 14:45:53] 2025-12-19 13:45:15,975 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 14:45:53] 2025-12-19 13:45:15,975 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 14:45:53] 2025-12-19 13:45:15,975 | INFO     | job 6933049056 has completed (purged errors)
[2025-12-19 14:45:53] 2025-12-19 13:45:15,975 | INFO     | overall cleanup function is called
[2025-12-19 14:45:53] 2025-12-19 13:45:16,984 | INFO     | --- collectZombieJob: --- 10, [8458]
[2025-12-19 14:45:53] 2025-12-19 13:45:16,984 | INFO     | zombie collector waiting for pid 8458
[2025-12-19 14:45:53] 2025-12-19 13:45:16,985 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 14:45:53] 2025-12-19 13:45:16,985 | INFO     | collected zombie processes
[2025-12-19 14:45:53] 2025-12-19 13:45:16,985 | INFO     | will attempt to kill all subprocesses of pid=8458
[2025-12-19 14:45:53] 2025-12-19 13:45:17,101 | INFO     | process IDs to be killed: [8458] (in reverse order)
[2025-12-19 14:45:53] 2025-12-19 13:45:17,166 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 14:45:53] 2025-12-19 13:45:17,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 14:45:53] 2025-12-19 13:45:17,169 | INFO     | did not find any defunct processes belonging to 8458
[2025-12-19 14:45:53] 2025-12-19 13:45:17,171 | INFO     | did not find any defunct processes belonging to 8458
[2025-12-19 14:45:53] 2025-12-19 13:45:17,171 | INFO     | ready for new job
[2025-12-19 14:45:53] 2025-12-19 13:45:17,171 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 14:45:53] 2025-12-19 13:45:17,173 | INFO     | ***************************************
[2025-12-19 14:45:53] 2025-12-19 13:45:17,173 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 14:45:53] 2025-12-19 13:45:17,173 | INFO     | ***************************************
[2025-12-19 14:45:53] 2025-12-19 13:45:17,173 | INFO     | 
[2025-12-19 14:45:53] 2025-12-19 13:45:17,174 | INFO     | pilot is running in a VM
[2025-12-19 14:45:53] 2025-12-19 13:45:17,174 | INFO     | architecture information:
[2025-12-19 14:45:53] 2025-12-19 13:45:17,174 | INFO     | executing command: cat /etc/os-release
[2025-12-19 14:45:53] 2025-12-19 13:45:17,191 | INFO     | cat /etc/os-release:
[2025-12-19 14:45:53] NAME="CentOS Linux"
[2025-12-19 14:45:53] VERSION="7 (Core)"
[2025-12-19 14:45:53] ID="centos"
[2025-12-19 14:45:53] ID_LIKE="rhel fedora"
[2025-12-19 14:45:53] VERSION_ID="7"
[2025-12-19 14:45:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 14:45:53] ANSI_COLOR="0;31"
[2025-12-19 14:45:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 14:45:53] HOME_URL="https://www.centos.org/"
[2025-12-19 14:45:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 14:45:53] 
[2025-12-19 14:45:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 14:45:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 14:45:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 14:45:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 14:45:53] 
[2025-12-19 14:45:53] 2025-12-19 13:45:17,192 | INFO     | ***************************************
[2025-12-19 14:45:53] 2025-12-19 13:45:17,694 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-12-19 14:45:53] 2025-12-19 13:45:17,715 | INFO     | sufficient remaining disk space (492537118720 B)
[2025-12-19 14:45:53] 2025-12-19 13:45:17,716 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 14:45:53] 2025-12-19 13:45:17,716 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 14:45:53] 2025-12-19 13:45:17,716 | INFO     | update_server=False
[2025-12-19 14:45:53] 2025-12-19 13:45:17,716 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 14:45:53] 2025-12-19 13:45:17,716 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 14:45:53] 2025-12-19 13:45:17,783 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-19 14:45:53] 2025-12-19 13:45:17,783 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-19 14:45:53] 2025-12-19 13:45:17,783 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 14:45:53] 2025-12-19 13:45:17,784 | INFO     | will abort loop
[2025-12-19 14:45:53] 2025-12-19 13:45:18,184 | INFO     | all data control threads have been joined
[2025-12-19 14:45:53] 2025-12-19 13:45:18,331 | INFO     | all payload control threads have been joined
[2025-12-19 14:45:53] 2025-12-19 13:45:18,398 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 14:45:53] 2025-12-19 13:45:18,721 | INFO     | [job] retrieve thread has finished
[2025-12-19 14:45:53] 2025-12-19 13:45:18,722 | INFO     | [job] queue monitor thread has finished
[2025-12-19 14:45:53] 2025-12-19 13:45:18,776 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 14:45:53] 2025-12-19 13:45:18,789 | INFO     | [job] job monitor thread has finished
[2025-12-19 14:45:53] 2025-12-19 13:45:18,885 | INFO     | [payload] failed_post thread has finished
[2025-12-19 14:45:53] 2025-12-19 13:45:18,960 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 14:45:53] 2025-12-19 13:45:19,124 | INFO     | all job control threads have been joined
[2025-12-19 14:45:53] 2025-12-19 13:45:19,190 | INFO     | [data] control thread has finished
[2025-12-19 14:45:53] 2025-12-19 13:45:19,337 | INFO     | [payload] control thread has finished
[2025-12-19 14:45:53] 2025-12-19 13:45:19,544 | INFO     | [data] copytool_in thread has finished
[2025-12-19 14:45:53] 2025-12-19 13:45:19,822 | INFO     | [payload] validate_post thread has finished
[2025-12-19 14:45:53] 2025-12-19 13:45:19,849 | INFO     | [job] validate thread has finished
[2025-12-19 14:45:53] 2025-12-19 13:45:19,855 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 14:45:53] 2025-12-19 13:45:20,130 | INFO     | [job] control thread has finished
[2025-12-19 14:45:53] 2025-12-19 13:45:20,297 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 14:45:53] 2025-12-19 13:45:20,405 | INFO     | [data] copytool_out thread has finished
[2025-12-19 14:45:53] 2025-12-19 13:45:24,306 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 14:45:53] 2025-12-19 13:45:28,092 | INFO     | job.realtimelogging is not enabled
[2025-12-19 14:45:53] 2025-12-19 13:45:29,098 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 14:45:53] 2025-12-19 13:45:46,834 | INFO     | [monitor] cgroup control has ended
[2025-12-19 14:45:53] 2025-12-19 13:45:47,503 | INFO     | PID=1836 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-19 14:45:53] 2025-12-19 13:45:47,504 | INFO     | .. there are 8 such processes running
[2025-12-19 14:45:53] 2025-12-19 13:45:47,505 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 14:45:53] 2025-12-19 13:45:47,505 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 14:45:53] 2025-12-19 13:45:47,505 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 14:45:53] 2025-12-19 13:45:47,698 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139860794611520)>', '<ExcThread(monitor, started 139860333537024)>']
[2025-12-19 14:45:53] 2025-12-19 13:45:48,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 14:45:53] 2025-12-19 13:45:48,511 | INFO     | [monitor] control thread has ended
[2025-12-19 14:45:53] 2025-12-19 13:45:52,724 | INFO     | all workflow threads have been joined
[2025-12-19 14:45:53] 2025-12-19 13:45:52,724 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 14:45:53] 2025-12-19 13:45:52,724 | INFO     | traces error code: 0
[2025-12-19 14:45:53] 2025-12-19 13:45:52,725 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 14:45:53] 2025-12-19 13:45:52,888 [wrapper] ==== pilot stdout END ====
[2025-12-19 14:45:53] 2025-12-19 13:45:52,903 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 14:45:53] 2025-12-19 13:45:52,930 [wrapper] pilotpid: 1836
[2025-12-19 14:45:53] 2025-12-19 13:45:52,936 [wrapper] Pilot exit status: 0
[2025-12-19 14:45:53] 2025-12-19 13:45:53,111 [wrapper] pandaids: 6933049056
[2025-12-19 14:45:53] 2025-12-19 13:45:53,158 [wrapper] cleanup supervisor_pilot 22665 1837
[2025-12-19 14:45:53] 2025-12-19 13:45:53,168 [wrapper] Test setup, not cleaning
[2025-12-19 14:45:53] 2025-12-19 13:45:53,171 [wrapper] apfmon messages muted
[2025-12-19 14:45:53] 2025-12-19 13:45:53,175 [wrapper] ==== wrapper stdout END ====
[2025-12-19 14:45:53] 2025-12-19 13:45:53,177 [wrapper] ==== wrapper stderr END ====
[2025-12-19 14:45:53]  *** Error codes and diagnostics ***
[2025-12-19 14:45:53]     "exeErrorCode": 0,
[2025-12-19 14:45:53]     "exeErrorDiag": "",
[2025-12-19 14:45:53]     "pilotErrorCode": 0,
[2025-12-19 14:45:53]     "pilotErrorDiag": "",
[2025-12-19 14:45:53]  *** Listing of results directory ***
[2025-12-19 14:45:53] total 435880
[2025-12-19 14:45:53] -rw-r--r--. 1 boinc boinc    579449 Dec 18 04:11 pilot3.tar.gz
[2025-12-19 14:45:53] -rw-r--r--. 1 boinc boinc      5112 Dec 18 04:11 queuedata.json
[2025-12-19 14:45:53] -rwx------. 1 boinc boinc     36322 Dec 18 04:12 runpilot2-wrapper.sh
[2025-12-19 14:45:53] -rw-r--r--. 1 boinc boinc       100 Dec 19 10:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 14:45:53] -rwxr-xr-x. 1 boinc boinc      7986 Dec 19 10:45 run_atlas
[2025-12-19 14:45:53] -rw-r--r--. 1 boinc boinc       105 Dec 19 10:45 job.xml
[2025-12-19 14:45:53] -rw-r--r--. 2 boinc boinc 253317734 Dec 19 10:45 EVNT.47929406._000011.pool.root.1
[2025-12-19 14:45:53] -rw-r--r--. 2 boinc boinc     15847 Dec 19 10:45 start_atlas.sh
[2025-12-19 14:45:53] drwxrwx--x. 2 boinc boinc        68 Dec 19 10:45 shared
[2025-12-19 14:45:53] -rw-r--r--. 2 boinc boinc    592416 Dec 19 10:45 input.tar.gz
[2025-12-19 14:45:53] -rw-r--r--. 1 boinc boinc      6392 Dec 19 10:45 init_data.xml
[2025-12-19 14:45:53] -rw-r--r--. 1 boinc boinc         0 Dec 19 10:45 boinc_lockfile
[2025-12-19 14:45:53] -rw-r--r--. 1 boinc boinc      2574 Dec 19 10:45 pandaJob.out
[2025-12-19 14:45:53] -rw-------. 1 boinc boinc    988887 Dec 19 10:49 agis_schedconf.cvmfs.json
[2025-12-19 14:45:53] drwx------. 5 boinc boinc      4096 Dec 19 10:49 pilot3
[2025-12-19 14:45:53] -rw-------. 1 boinc boinc 184369626 Dec 19 14:44 HITS.47929408._000264.pool.root.1
[2025-12-19 14:45:53] -rw-r--r--. 1 boinc boinc       531 Dec 19 14:44 boinc_task_state.xml
[2025-12-19 14:45:53] -rw-------. 1 boinc boinc      1019 Dec 19 14:44 memory_monitor_summary.json
[2025-12-19 14:45:53] -rw-------. 1 boinc boinc   1516240 Dec 19 14:44 agis_ddmendpoints.agis.ALL.json
[2025-12-19 14:45:53] -rw-------. 1 boinc boinc    457979 Dec 19 14:44 log.47929408._000264.job.log.tgz.1
[2025-12-19 14:45:53] -rw-------. 1 boinc boinc      7775 Dec 19 14:45 heartbeat.json
[2025-12-19 14:45:53] -rw-r--r--. 1 boinc boinc        28 Dec 19 14:45 wrapper_checkpoint.txt
[2025-12-19 14:45:53] -rw-r--r--. 1 boinc boinc      8192 Dec 19 14:45 boinc_mmap_file
[2025-12-19 14:45:53] -rw-------. 1 boinc boinc        95 Dec 19 14:45 pilot_heartbeat.json
[2025-12-19 14:45:53] -rw-------. 1 boinc boinc      5141 Dec 19 14:45 pilotlog.txt
[2025-12-19 14:45:53] -rw-------. 1 boinc boinc   1917854 Dec 19 14:45 log.47929408._000264.job.log.1
[2025-12-19 14:45:53] -rw-------. 1 boinc boinc       357 Dec 19 14:45 output.list
[2025-12-19 14:45:53] -rw-r--r--. 1 boinc boinc       620 Dec 19 14:45 runtime_log
[2025-12-19 14:45:53] -rw-------. 1 boinc boinc   2396160 Dec 19 14:45 result.tar.gz
[2025-12-19 14:45:53] -rw-r--r--. 1 boinc boinc      8817 Dec 19 14:45 runtime_log.err
[2025-12-19 14:45:53] -rw-------. 1 boinc boinc       656 Dec 19 14:45 PSbLDmvcJq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdbYKDmLaZ3Ko.diag
[2025-12-19 14:45:53] -rw-r--r--. 1 boinc boinc     20939 Dec 19 14:45 stderr.txt
[2025-12-19 14:45:53] HITS file was successfully produced:
[2025-12-19 14:45:53] -rw-------. 1 boinc boinc 184369626 Dec 19 14:44 shared/HITS.pool.root.1
[2025-12-19 14:45:53]  *** Contents of shared directory: ***
[2025-12-19 14:45:53] total 430372
[2025-12-19 14:45:53] -rw-r--r--. 2 boinc boinc 253317734 Dec 19 10:45 ATLAS.root_0
[2025-12-19 14:45:53] -rw-r--r--. 2 boinc boinc     15847 Dec 19 10:45 start_atlas.sh
[2025-12-19 14:45:53] -rw-r--r--. 2 boinc boinc    592416 Dec 19 10:45 input.tar.gz
[2025-12-19 14:45:53] -rw-------. 1 boinc boinc 184369626 Dec 19 14:44 HITS.pool.root.1
[2025-12-19 14:45:53] -rw-------. 1 boinc boinc   2396160 Dec 19 14:45 result.tar.gz
14:45:55 (30422): run_atlas exited; CPU time 50973.964405
14:45:55 (30422): called boinc_finish(0)

</stderr_txt>
]]>

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