Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:39:46 (371124): wrapper (7.7.26015): starting
10:39:46 (371124): wrapper: running run_atlas (--nthreads 3)
[2025-12-19 10:39:46] Arguments: --nthreads 3
[2025-12-19 10:39:46] Threads: 3
[2025-12-19 10:39:46] Checking for CVMFS
[2025-12-19 10:39:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 10:39:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 10:39:46] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 10:39:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 10:39:46] 2.9.2.0 3111 1217 74880 154183 0 57 22693726 36864001 0 130560 0 830481 99.991 43751 20883 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-19 10:39:46] CVMFS is ok
[2025-12-19 10:39:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-19 10:39:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-19 10:39:46] Further information can be found at the LHC@home message board.
[2025-12-19 10:39:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 10:39:46] Checking for apptainer binary...
[2025-12-19 10:39:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 10:39:46] Running /usr/bin/apptainer --version
[2025-12-19 10:39:46] apptainer version 1.4.1-1.1
[2025-12-19 10:39:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 10:39:46] legendA163
[2025-12-19 10:39:46] apptainer works
[2025-12-19 10:39:46] Set ATHENA_PROC_NUMBER=3
[2025-12-19 10:39:46] Set ATHENA_CORE_NUMBER=3
[2025-12-19 10:39:46] Starting ATLAS job with PandaID=6934214595
[2025-12-19 10:39:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 12:09:15]  *** The last 200 lines of the pilot log: ***
[2025-12-19 12:09:15]  mtime=0
[2025-12-19 12:09:15]  protocol_id=None
[2025-12-19 12:09:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-19 12:09:15]  replicas=None
[2025-12-19 12:09:15]  scope=mc23_13p6TeV
[2025-12-19 12:09:15]  status=None
[2025-12-19 12:09:15]  status_code=0
[2025-12-19 12:09:15]  storage_token=
[2025-12-19 12:09:15]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6934214595/log.47886933._016341.job.log.tgz.1
[2025-12-19 12:09:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ab/4a/log.47886933._016341.job.log.tgz.1
[2025-12-19 12:09:15]  workdir=None
[2025-12-19 12:09:15] ]
[2025-12-19 12:09:15] 2025-12-19 11:08:34,692 | INFO     | transferring file log.47886933._016341.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6934214595/log.47886933._016341.job.log.tgz.1 to /local/data/boinc/
[2025-12-19 12:09:15] 2025-12-19 11:08:34,692 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6934214595/log.47886933._016341.job.log.tgz.1 /local/data/boinc/slots/0/log.47886933._0163
[2025-12-19 12:09:15] 2025-12-19 11:08:34,707 | INFO     | adding to output.list: log.47886933._016341.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ab/4a/log.47886933._016341.job.log.tg
[2025-12-19 12:09:15] 2025-12-19 11:08:34,707 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-19 12:09:15] 2025-12-19 11:08:34,707 | INFO     | summary of transferred files:
[2025-12-19 12:09:15] 2025-12-19 11:08:34,708 | INFO     |  -- lfn=log.47886933._016341.job.log.tgz.1, status_code=0, status=transferred
[2025-12-19 12:09:15] 2025-12-19 11:08:34,708 | INFO     | stage-out finished correctly
[2025-12-19 12:09:15] 2025-12-19 11:08:35,344 | INFO     | monitor loop #410: job 0:6934214595 is in state 'finished'
[2025-12-19 12:09:15] 2025-12-19 11:08:35,345 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 12:09:15] 2025-12-19 11:08:35,657 | INFO     | time since job start (5323s) is within the limit (174528.0s)
[2025-12-19 12:09:15] 2025-12-19 11:08:37,182 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-19 12:09:15] 2025-12-19 11:08:37,664 | INFO     | time since job start (5325s) is within the limit (174528.0s)
[2025-12-19 12:09:15] 2025-12-19 11:08:37,849 | INFO     | monitor loop #411: job 0:6934214595 is in state 'finished'
[2025-12-19 12:09:15] 2025-12-19 11:08:37,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 12:09:15] 2025-12-19 11:08:37,876 | INFO     | job 6934214595 has state=finished
[2025-12-19 12:09:15] 2025-12-19 11:08:37,876 | INFO     | preparing for final server update for job 6934214595 in state='finished'
[2025-12-19 12:09:15] 2025-12-19 11:08:37,877 | INFO     | this job has now completed (state=finished)
[2025-12-19 12:09:15] 2025-12-19 11:08:37,877 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-19 12:09:15] 2025-12-19 11:08:37,877 | INFO     | log transfer has been attempted: DONE
[2025-12-19 12:09:15] 2025-12-19 11:08:37,877 | INFO     | job 6934214595 has finished - writing final server update
[2025-12-19 12:09:15] 2025-12-19 11:08:37,877 | INFO     | total number of processed events: 400 (read)
[2025-12-19 12:09:15] 2025-12-19 11:08:37,878 | INFO     | executing command: lscpu
[2025-12-19 12:09:15] 2025-12-19 11:08:37,895 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-19 12:09:15] 2025-12-19 11:08:39,670 | INFO     | time since job start (5327s) is within the limit (174528.0s)
[2025-12-19 12:09:15] 2025-12-19 11:08:40,352 | INFO     | monitor loop #412: job 0:6934214595 is in state 'finished'
[2025-12-19 12:09:15] 2025-12-19 11:08:40,352 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 12:09:15] 2025-12-19 11:08:41,675 | INFO     | time since job start (5329s) is within the limit (174528.0s)
[2025-12-19 12:09:15] 2025-12-19 11:08:42,367 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-19 12:09:15] 2025-12-19 11:08:42,368 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3666.7402500000003
[2025-12-19 12:09:15] 2025-12-19 11:08:42,369 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6934214595/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 12:09:15] 2025-12-19 11:08:42,370 | INFO     | extracted standard info from prmon json
[2025-12-19 12:09:15] 2025-12-19 11:08:42,370 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 12:09:15] 2025-12-19 11:08:42,370 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 12:09:15] 2025-12-19 11:08:42,370 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 12:09:15] 2025-12-19 11:08:42,370 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 12:09:15] 2025-12-19 11:08:42,371 | INFO     | fitting pss+swap vs Time
[2025-12-19 12:09:15] 2025-12-19 11:08:42,371 | INFO     | sum of square deviations: 158737860.0
[2025-12-19 12:09:15] 2025-12-19 11:08:42,371 | INFO     | sum of deviations: -18368110892.0
[2025-12-19 12:09:15] 2025-12-19 11:08:42,371 | INFO     | mean x: 1766139927.5
[2025-12-19 12:09:15] 2025-12-19 11:08:42,371 | INFO     | mean y: 2480571.625
[2025-12-19 12:09:15] 2025-12-19 11:08:42,371 | INFO     | intersect: 204368685578.47617
[2025-12-19 12:09:15] 2025-12-19 11:08:42,371 | INFO     | chi2: 0.16270034766412106
[2025-12-19 12:09:15] 2025-12-19 11:08:42,371 | INFO     | current memory leak: -115.71 B/s (using 80 data points, chi2=0.16)
[2025-12-19 12:09:15] 2025-12-19 11:08:42,371 | INFO     | could have reported an average CPU frequency of 3812 MHz (6 samples)
[2025-12-19 12:09:15] 2025-12-19 11:08:42,371 | INFO     | ..............................
[2025-12-19 12:09:15] 2025-12-19 11:08:42,372 | INFO     | . Timing measurements:
[2025-12-19 12:09:15] 2025-12-19 11:08:42,372 | INFO     | . get job = 0 s
[2025-12-19 12:09:15] 2025-12-19 11:08:42,372 | INFO     | . initial setup = 1 s
[2025-12-19 12:09:15] 2025-12-19 11:08:42,372 | INFO     | . payload setup = 3 s
[2025-12-19 12:09:15] 2025-12-19 11:08:42,372 | INFO     | . stage-in = 0 s
[2025-12-19 12:09:15] 2025-12-19 11:08:42,372 | INFO     | . payload execution = 5300 s
[2025-12-19 12:09:15] 2025-12-19 11:08:42,372 | INFO     | . stage-out = 0 s
[2025-12-19 12:09:15] 2025-12-19 11:08:42,372 | INFO     | . log creation = 0 s
[2025-12-19 12:09:15] 2025-12-19 11:08:42,372 | INFO     | ..............................
[2025-12-19 12:09:15] 2025-12-19 11:08:42,488 | INFO     | 
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | job summary report
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | --------------------------------------------------
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | PanDA job id: 6934214595
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | task id: 47886933
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | errors: (none)
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | pilot state: finished 
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | transexitcode: 0
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | exeerrorcode: 0
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | exeerrordiag: 
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | exitcode: 0
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | exitmsg: OK
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | cpuconsumptiontime: 15213 s
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | nevents: 400
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | neventsw: 0
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | pid: 381334
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | pgrp: 381334
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | corecount: 3
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | event service: False
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | sizes: {0: 2283973, 2: 2284235, 10: 2284263, 5307: 2310902, 5309: 2319906, 5311: 2319962, 5316: 2320284}
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | --------------------------------------------------
[2025-12-19 12:09:15] 2025-12-19 11:08:42,489 | INFO     | 
[2025-12-19 12:09:15] 2025-12-19 11:08:42,490 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-19 12:09:15] 2025-12-19 11:08:42,505 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 12:09:15] 2025-12-19 11:08:42,505 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 12:09:15] 2025-12-19 11:08:42,505 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 12:09:15] 2025-12-19 11:08:42,505 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 12:09:15] 2025-12-19 11:08:42,505 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 12:09:15] 2025-12-19 11:08:42,505 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 12:09:15] 2025-12-19 11:08:42,505 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 12:09:15] 2025-12-19 11:08:42,505 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 12:09:15] 2025-12-19 11:08:42,505 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 12:09:15] 2025-12-19 11:08:42,505 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 12:09:15] 2025-12-19 11:08:42,505 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 12:09:15] 2025-12-19 11:08:42,505 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 12:09:15] 2025-12-19 11:08:42,505 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 12:09:15] 2025-12-19 11:08:42,505 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 12:09:15] 2025-12-19 11:08:42,506 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 12:09:15] 2025-12-19 11:08:42,506 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 12:09:15] 2025-12-19 11:08:42,506 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 12:09:15] 2025-12-19 11:08:42,506 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 12:09:15] 2025-12-19 11:08:42,506 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 12:09:15] 2025-12-19 11:08:42,506 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 12:09:15] 2025-12-19 11:08:42,506 | INFO     | job 6934214595 has completed (purged errors)
[2025-12-19 12:09:15] 2025-12-19 11:08:42,506 | INFO     | overall cleanup function is called
[2025-12-19 12:09:15] 2025-12-19 11:08:43,513 | INFO     | --- collectZombieJob: --- 10, [381334]
[2025-12-19 12:09:15] 2025-12-19 11:08:43,513 | INFO     | zombie collector waiting for pid 381334
[2025-12-19 12:09:15] 2025-12-19 11:08:43,513 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 12:09:15] 2025-12-19 11:08:43,513 | INFO     | collected zombie processes
[2025-12-19 12:09:15] 2025-12-19 11:08:43,513 | INFO     | will attempt to kill all subprocesses of pid=381334
[2025-12-19 12:09:15] 2025-12-19 11:08:43,571 | INFO     | process IDs to be killed: [381334] (in reverse order)
[2025-12-19 12:09:15] 2025-12-19 11:08:43,602 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 12:09:15] 2025-12-19 11:08:43,603 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 12:09:15] 2025-12-19 11:08:43,605 | INFO     | did not find any defunct processes belonging to 381334
[2025-12-19 12:09:15] 2025-12-19 11:08:43,606 | INFO     | did not find any defunct processes belonging to 381334
[2025-12-19 12:09:15] 2025-12-19 11:08:43,606 | INFO     | ready for new job
[2025-12-19 12:09:15] 2025-12-19 11:08:43,606 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 12:09:15] 2025-12-19 11:08:43,607 | INFO     | ***************************************
[2025-12-19 12:09:15] 2025-12-19 11:08:43,607 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 12:09:15] 2025-12-19 11:08:43,607 | INFO     | ***************************************
[2025-12-19 12:09:15] 2025-12-19 11:08:43,607 | INFO     | 
[2025-12-19 12:09:15] 2025-12-19 11:08:43,607 | INFO     | architecture information:
[2025-12-19 12:09:15] 2025-12-19 11:08:43,607 | INFO     | executing command: cat /etc/os-release
[2025-12-19 12:09:15] 2025-12-19 11:08:43,617 | INFO     | cat /etc/os-release:
[2025-12-19 12:09:15] NAME="CentOS Linux"
[2025-12-19 12:09:15] VERSION="7 (Core)"
[2025-12-19 12:09:15] ID="centos"
[2025-12-19 12:09:15] ID_LIKE="rhel fedora"
[2025-12-19 12:09:15] VERSION_ID="7"
[2025-12-19 12:09:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 12:09:15] ANSI_COLOR="0;31"
[2025-12-19 12:09:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 12:09:15] HOME_URL="https://www.centos.org/"
[2025-12-19 12:09:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 12:09:15] 
[2025-12-19 12:09:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 12:09:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 12:09:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 12:09:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 12:09:15] 
[2025-12-19 12:09:15] 2025-12-19 11:08:43,617 | INFO     | ***************************************
[2025-12-19 12:09:15] 2025-12-19 11:08:44,121 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-19 12:09:15] 2025-12-19 11:08:44,134 | INFO     | sufficient remaining disk space (382978752512 B)
[2025-12-19 12:09:15] 2025-12-19 11:08:44,134 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 12:09:15] 2025-12-19 11:08:44,134 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 12:09:15] 2025-12-19 11:08:44,134 | INFO     | update_server=False
[2025-12-19 12:09:15] 2025-12-19 11:08:44,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 12:09:15] 2025-12-19 11:08:44,134 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 12:09:15] 2025-12-19 11:08:44,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 12:09:15] 2025-12-19 11:08:44,135 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 12:09:15] 2025-12-19 11:08:44,135 | INFO     | aborting loop
[2025-12-19 12:09:15] 2025-12-19 11:08:44,208 | INFO     | all payload control threads have been joined
[2025-12-19 12:09:15] 2025-12-19 11:08:44,551 | INFO     | all data control threads have been joined
[2025-12-19 12:09:15] 2025-12-19 11:08:44,616 | INFO     | all job control threads have been joined
[2025-12-19 12:09:15] 2025-12-19 11:08:45,140 | INFO     | [job] retrieve thread has finished
[2025-12-19 12:09:15] 2025-12-19 11:08:45,140 | INFO     | [job] queue monitor thread has finished
[2025-12-19 12:09:15] 2025-12-19 11:08:45,141 | INFO     | [job] job monitor thread has finished
[2025-12-19 12:09:15] 2025-12-19 11:08:45,194 | INFO     | [payload] failed_post thread has finished
[2025-12-19 12:09:15] 2025-12-19 11:08:45,214 | INFO     | [payload] control thread has finished
[2025-12-19 12:09:15] 2025-12-19 11:08:45,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 12:09:15] 2025-12-19 11:08:45,285 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 12:09:15] 2025-12-19 11:08:45,556 | INFO     | [data] control thread has finished
[2025-12-19 12:09:15] 2025-12-19 11:08:45,622 | INFO     | [job] control thread has finished
[2025-12-19 12:09:15] 2025-12-19 11:08:45,717 | INFO     | [payload] validate_post thread has finished
[2025-12-19 12:09:15] 2025-12-19 11:08:46,145 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 12:09:15] 2025-12-19 11:08:46,340 | INFO     | [data] copytool_in thread has finished
[2025-12-19 12:09:15] 2025-12-19 11:08:46,512 | INFO     | [job] validate thread has finished
[2025-12-19 12:09:15] 2025-12-19 11:08:46,576 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 12:09:15] 2025-12-19 11:08:46,633 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 12:09:15] 2025-12-19 11:08:47,260 | INFO     | [data] copytool_out thread has finished
[2025-12-19 12:09:15] 2025-12-19 11:08:48,141 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 12:09:15] 2025-12-19 11:08:58,294 | INFO     | [monitor] cgroup control has ended
[2025-12-19 12:09:15] 2025-12-19 11:08:59,085 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139857356515136)>', '<ExcThread(monitor, started 139856709658368)>']
[2025-12-19 12:09:15] 2025-12-19 11:09:04,110 | INFO     | all workflow threads have been joined
[2025-12-19 12:09:15] 2025-12-19 11:09:04,111 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 12:09:15] 2025-12-19 11:09:04,111 | INFO     | traces error code: 0
[2025-12-19 12:09:15] 2025-12-19 11:09:04,111 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 12:09:15] 2025-12-19 11:09:14,863 | INFO     | PID=374861 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-19 12:09:15] 2025-12-19 11:09:14,864 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 12:09:15] 2025-12-19 11:09:14,864 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 12:09:15] 2025-12-19 11:09:14,864 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 12:09:15] 2025-12-19 11:09:14,864 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 12:09:15] 2025-12-19 11:09:14,864 | INFO     | [monitor] control thread has ended
[2025-12-19 12:09:15] 2025-12-19 11:09:14,923 [wrapper] ==== pilot stdout END ====
[2025-12-19 12:09:15] 2025-12-19 11:09:14,925 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 12:09:15] 2025-12-19 11:09:14,928 [wrapper] pilotpid: 374861
[2025-12-19 12:09:15] 2025-12-19 11:09:14,930 [wrapper] Pilot exit status: 0
[2025-12-19 12:09:15] 2025-12-19 11:09:14,938 [wrapper] pandaids: 6934214595
[2025-12-19 12:09:15] 2025-12-19 11:09:14,960 [wrapper] cleanup supervisor_pilot  396723 374862
[2025-12-19 12:09:15] 2025-12-19 11:09:14,963 [wrapper] Test setup, not cleaning
[2025-12-19 12:09:15] 2025-12-19 11:09:14,966 [wrapper] apfmon messages muted
[2025-12-19 12:09:15] 2025-12-19 11:09:14,968 [wrapper] ==== wrapper stdout END ====
[2025-12-19 12:09:15] 2025-12-19 11:09:14,971 [wrapper] ==== wrapper stderr END ====
[2025-12-19 12:09:15]  *** Error codes and diagnostics ***
[2025-12-19 12:09:15]     "exeErrorCode": 0,
[2025-12-19 12:09:15]     "exeErrorDiag": "",
[2025-12-19 12:09:15]     "pilotErrorCode": 0,
[2025-12-19 12:09:15]     "pilotErrorDiag": "",
[2025-12-19 12:09:15]  *** Listing of results directory ***
[2025-12-19 12:09:15] total 336052
[2025-12-19 12:09:15] -rw-r--r-- 1 boinc boinc    579449 Dec 18 19:19 pilot3.tar.gz
[2025-12-19 12:09:15] -rwx------ 1 boinc boinc     36322 Dec 18 19:19 runpilot2-wrapper.sh
[2025-12-19 12:09:15] -rw-r--r-- 1 boinc boinc      5112 Dec 18 19:20 queuedata.json
[2025-12-19 12:09:15] -rw-r--r-- 1 boinc boinc       100 Dec 19 10:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 12:09:15] -rwxr-xr-x 1 boinc boinc      7986 Dec 19 10:39 run_atlas
[2025-12-19 12:09:15] -rw-r--r-- 1 boinc boinc       105 Dec 19 10:39 job.xml
[2025-12-19 12:09:15] -rw-r--r-- 2 boinc boinc 192350216 Dec 19 10:39 EVNT.47886929._000673.pool.root.1
[2025-12-19 12:09:15] -rw-r--r-- 2 boinc boinc    592396 Dec 19 10:39 input.tar.gz
[2025-12-19 12:09:15] -rw-r--r-- 2 boinc boinc     15847 Dec 19 10:39 start_atlas.sh
[2025-12-19 12:09:15] drwxrwx--x 2 boinc boinc      4096 Dec 19 10:39 shared
[2025-12-19 12:09:15] -rw-r--r-- 1 boinc boinc         0 Dec 19 10:39 boinc_setup_complete
[2025-12-19 12:09:15] -rw-r--r-- 1 boinc boinc      6449 Dec 19 10:39 init_data.xml
[2025-12-19 12:09:15] -rw-r--r-- 1 boinc boinc         0 Dec 19 10:39 boinc_lockfile
[2025-12-19 12:09:15] -rw-r--r-- 1 boinc boinc      2516 Dec 19 10:39 pandaJob.out
[2025-12-19 12:09:15] -rw------- 1 boinc boinc    988887 Dec 19 10:39 agis_schedconf.cvmfs.json
[2025-12-19 12:09:15] -rw------- 1 boinc boinc   1516240 Dec 19 10:39 agis_ddmendpoints.agis.ALL.json
[2025-12-19 12:09:15] drwx------ 5 boinc boinc      4096 Dec 19 10:39 pilot3
[2025-12-19 12:09:15] -rw------- 1 boinc boinc 145763529 Dec 19 12:08 HITS.47886933._016341.pool.root.1
[2025-12-19 12:09:15] -rw------- 1 boinc boinc        95 Dec 19 12:08 pilot_heartbeat.json
[2025-12-19 12:09:15] -rw-r--r-- 1 boinc boinc       529 Dec 19 12:08 boinc_task_state.xml
[2025-12-19 12:09:15] -rw------- 1 boinc boinc      1020 Dec 19 12:08 memory_monitor_summary.json
[2025-12-19 12:09:15] -rw------- 1 boinc boinc    271101 Dec 19 12:08 log.47886933._016341.job.log.tgz.1
[2025-12-19 12:09:15] -rw------- 1 boinc boinc      7762 Dec 19 12:08 heartbeat.json
[2025-12-19 12:09:15] -rw-r--r-- 1 boinc boinc      8192 Dec 19 12:09 boinc_mmap_file
[2025-12-19 12:09:15] -rw-r--r-- 1 boinc boinc        27 Dec 19 12:09 wrapper_checkpoint.txt
[2025-12-19 12:09:15] -rw------- 1 boinc boinc       746 Dec 19 12:09 pilotlog.txt
[2025-12-19 12:09:15] -rw------- 1 boinc boinc    777617 Dec 19 12:09 log.47886933._016341.job.log.1
[2025-12-19 12:09:15] -rw------- 1 boinc boinc       357 Dec 19 12:09 output.list
[2025-12-19 12:09:15] -rw-r--r-- 1 boinc boinc       620 Dec 19 12:09 runtime_log
[2025-12-19 12:09:15] -rw------- 1 boinc boinc   1064960 Dec 19 12:09 result.tar.gz
[2025-12-19 12:09:15] -rw-r--r-- 1 boinc boinc      8917 Dec 19 12:09 runtime_log.err
[2025-12-19 12:09:15] -rw------- 1 boinc boinc       662 Dec 19 12:09 n7sLDmRmXq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiTeKDmdwo9xn.diag
[2025-12-19 12:09:15] -rw-r--r-- 1 boinc boinc     21754 Dec 19 12:09 stderr.txt
[2025-12-19 12:09:15] HITS file was successfully produced:
[2025-12-19 12:09:15] -rw------- 1 boinc boinc 145763529 Dec 19 12:08 shared/HITS.pool.root.1
[2025-12-19 12:09:15]  *** Contents of shared directory: ***
[2025-12-19 12:09:15] total 331836
[2025-12-19 12:09:15] -rw-r--r-- 2 boinc boinc 192350216 Dec 19 10:39 ATLAS.root_0
[2025-12-19 12:09:15] -rw-r--r-- 2 boinc boinc    592396 Dec 19 10:39 input.tar.gz
[2025-12-19 12:09:15] -rw-r--r-- 2 boinc boinc     15847 Dec 19 10:39 start_atlas.sh
[2025-12-19 12:09:15] -rw------- 1 boinc boinc 145763529 Dec 19 12:08 HITS.pool.root.1
[2025-12-19 12:09:15] -rw------- 1 boinc boinc   1064960 Dec 19 12:09 result.tar.gz
12:09:37 (371124): run_atlas exited; CPU time 15239.126382
12:09:37 (371124): called boinc_finish(0)

</stderr_txt>
]]>

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