Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:33:38 (867048): wrapper (7.7.26015): starting
16:33:38 (867048): wrapper: running run_atlas (--nthreads 4)
[2025-12-19 16:33:38] Arguments: --nthreads 4
[2025-12-19 16:33:38] Threads: 4
[2025-12-19 16:33:38] Checking for CVMFS
[2025-12-19 16:33:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 16:33:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 16:33:38] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 16:33:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 16:33:38] 2.9.2.0 3067 3030 94464 154193 3 57 19131313 36864000 0 130560 0 2233955 99.991 107218 5930 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-19 16:33:38] CVMFS is ok
[2025-12-19 16:33:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-19 16:33:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-19 16:33:38] Further information can be found at the LHC@home message board.
[2025-12-19 16:33:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 16:33:38] Checking for apptainer binary...
[2025-12-19 16:33:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 16:33:38] Running /usr/bin/apptainer --version
[2025-12-19 16:33:38] apptainer version 1.4.1-1.1
[2025-12-19 16:33:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 16:33:38] thA314
[2025-12-19 16:33:38] apptainer works
[2025-12-19 16:33:38] Set ATHENA_PROC_NUMBER=4
[2025-12-19 16:33:38] Set ATHENA_CORE_NUMBER=4
[2025-12-19 16:33:38] Starting ATLAS job with PandaID=6933465145
[2025-12-19 16:33:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 18:12:01]  *** The last 200 lines of the pilot log: ***
[2025-12-19 18:12:01]  storage_token=
[2025-12-19 18:12:01]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6933465145/log.47898763._023890.job.log.tgz.1
[2025-12-19 18:12:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/56/log.47898763._023890.job.log.tgz.1
[2025-12-19 18:12:01]  workdir=None
[2025-12-19 18:12:01] ]
[2025-12-19 18:12:01] 2025-12-19 17:11:19,586 | INFO     | transferring file log.47898763._023890.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6933465145/log.47898763._023890.job.log.tgz.1 to /local/data/boinc/
[2025-12-19 18:12:01] 2025-12-19 17:11:19,586 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6933465145/log.47898763._023890.job.log.tgz.1 /local/data/boinc/slots/0/log.47898763._0238
[2025-12-19 18:12:01] 2025-12-19 17:11:19,606 | INFO     | adding to output.list: log.47898763._023890.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/56/log.47898763._023890.job.log.tg
[2025-12-19 18:12:01] 2025-12-19 17:11:19,606 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-19 18:12:01] 2025-12-19 17:11:19,607 | INFO     | summary of transferred files:
[2025-12-19 18:12:01] 2025-12-19 17:11:19,607 | INFO     |  -- lfn=log.47898763._023890.job.log.tgz.1, status_code=0, status=transferred
[2025-12-19 18:12:01] 2025-12-19 17:11:19,607 | INFO     | stage-out finished correctly
[2025-12-19 18:12:01] 2025-12-19 17:11:20,315 | INFO     | time since job start (5854s) is within the limit (174528.0s)
[2025-12-19 18:12:01] 2025-12-19 17:11:20,395 | WARNING  | process 877412 can no longer be monitored (due to stat problems) - aborting
[2025-12-19 18:12:01] 2025-12-19 17:11:20,395 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6933465145/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 18:12:01] 2025-12-19 17:11:20,435 | INFO     | number of running child processes to parent process 877412: 1
[2025-12-19 18:12:01] 2025-12-19 17:11:20,436 | INFO     | maximum number of monitored processes: 6
[2025-12-19 18:12:01] 2025-12-19 17:11:22,321 | INFO     | time since job start (5856s) is within the limit (174528.0s)
[2025-12-19 18:12:01] 2025-12-19 17:11:22,694 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-19 18:12:01] 2025-12-19 17:11:22,939 | INFO     | monitor loop #449: job 0:6933465145 is in state 'finished'
[2025-12-19 18:12:01] 2025-12-19 17:11:22,940 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 18:12:01] 2025-12-19 17:11:24,327 | INFO     | time since job start (5858s) is within the limit (174528.0s)
[2025-12-19 18:12:01] 2025-12-19 17:11:24,905 | INFO     | job 6933465145 has state=finished
[2025-12-19 18:12:01] 2025-12-19 17:11:24,905 | INFO     | preparing for final server update for job 6933465145 in state='finished'
[2025-12-19 18:12:01] 2025-12-19 17:11:24,905 | INFO     | this job has now completed (state=finished)
[2025-12-19 18:12:01] 2025-12-19 17:11:24,906 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-19 18:12:01] 2025-12-19 17:11:24,906 | INFO     | log transfer has been attempted: DONE
[2025-12-19 18:12:01] 2025-12-19 17:11:24,906 | INFO     | job 6933465145 has finished - writing final server update
[2025-12-19 18:12:01] 2025-12-19 17:11:24,906 | INFO     | total number of processed events: 400 (read)
[2025-12-19 18:12:01] 2025-12-19 17:11:24,907 | INFO     | executing command: lscpu
[2025-12-19 18:12:01] 2025-12-19 17:11:24,928 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-19 18:12:01] 2025-12-19 17:11:25,442 | INFO     | monitor loop #450: job 0:6933465145 is in state 'finished'
[2025-12-19 18:12:01] 2025-12-19 17:11:25,443 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 18:12:01] 2025-12-19 17:11:26,333 | INFO     | time since job start (5860s) is within the limit (174528.0s)
[2025-12-19 18:12:01] 2025-12-19 17:11:27,401 | INFO     | PID=870841 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-19 18:12:01] 2025-12-19 17:11:27,946 | INFO     | monitor loop #451: job 0:6933465145 is in state 'finished'
[2025-12-19 18:12:01] 2025-12-19 17:11:27,946 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 18:12:01] 2025-12-19 17:11:28,401 | INFO     | time since job start (5862s) is within the limit (174528.0s)
[2025-12-19 18:12:01] 2025-12-19 17:11:28,999 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-19 18:12:01] 2025-12-19 17:11:29,000 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3175.2104375
[2025-12-19 18:12:01] 2025-12-19 17:11:29,001 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6933465145/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 18:12:01] 2025-12-19 17:11:29,002 | INFO     | extracted standard info from prmon json
[2025-12-19 18:12:01] 2025-12-19 17:11:29,002 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 18:12:01] 2025-12-19 17:11:29,002 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 18:12:01] 2025-12-19 17:11:29,002 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 18:12:01] 2025-12-19 17:11:29,002 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 18:12:01] 2025-12-19 17:11:29,003 | INFO     | fitting pss+swap vs Time
[2025-12-19 18:12:01] 2025-12-19 17:11:29,003 | INFO     | sum of square deviations: 218571540.0
[2025-12-19 18:12:01] 2025-12-19 17:11:29,003 | INFO     | sum of deviations: -14960315331.000004
[2025-12-19 18:12:01] 2025-12-19 17:11:29,003 | INFO     | mean x: 1766161439.0
[2025-12-19 18:12:01] 2025-12-19 17:11:29,003 | INFO     | mean y: 2513891.5393258426
[2025-12-19 18:12:01] 2025-12-19 17:11:29,003 | INFO     | intersect: 120888938779.66852
[2025-12-19 18:12:01] 2025-12-19 17:11:29,003 | INFO     | chi2: 0.07921424340414654
[2025-12-19 18:12:01] 2025-12-19 17:11:29,003 | INFO     | current memory leak: -68.45 B/s (using 89 data points, chi2=0.08)
[2025-12-19 18:12:01] 2025-12-19 17:11:29,003 | INFO     | could have reported an average CPU frequency of 3606 MHz (7 samples)
[2025-12-19 18:12:01] 2025-12-19 17:11:29,003 | INFO     | ..............................
[2025-12-19 18:12:01] 2025-12-19 17:11:29,004 | INFO     | . Timing measurements:
[2025-12-19 18:12:01] 2025-12-19 17:11:29,004 | INFO     | . get job = 0 s
[2025-12-19 18:12:01] 2025-12-19 17:11:29,004 | INFO     | . initial setup = 1 s
[2025-12-19 18:12:01] 2025-12-19 17:11:29,004 | INFO     | . payload setup = 4 s
[2025-12-19 18:12:01] 2025-12-19 17:11:29,004 | INFO     | . stage-in = 0 s
[2025-12-19 18:12:01] 2025-12-19 17:11:29,004 | INFO     | . payload execution = 5830 s
[2025-12-19 18:12:01] 2025-12-19 17:11:29,004 | INFO     | . stage-out = 0 s
[2025-12-19 18:12:01] 2025-12-19 17:11:29,004 | INFO     | . log creation = 0 s
[2025-12-19 18:12:01] 2025-12-19 17:11:29,004 | INFO     | ..............................
[2025-12-19 18:12:01] 2025-12-19 17:11:29,043 | INFO     | 
[2025-12-19 18:12:01] 2025-12-19 17:11:29,043 | INFO     | job summary report
[2025-12-19 18:12:01] 2025-12-19 17:11:29,043 | INFO     | --------------------------------------------------
[2025-12-19 18:12:01] 2025-12-19 17:11:29,043 | INFO     | PanDA job id: 6933465145
[2025-12-19 18:12:01] 2025-12-19 17:11:29,043 | INFO     | task id: 47898763
[2025-12-19 18:12:01] 2025-12-19 17:11:29,043 | INFO     | errors: (none)
[2025-12-19 18:12:01] 2025-12-19 17:11:29,043 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 18:12:01] 2025-12-19 17:11:29,043 | INFO     | pilot state: finished 
[2025-12-19 18:12:01] 2025-12-19 17:11:29,044 | INFO     | transexitcode: 0
[2025-12-19 18:12:01] 2025-12-19 17:11:29,044 | INFO     | exeerrorcode: 0
[2025-12-19 18:12:01] 2025-12-19 17:11:29,044 | INFO     | exeerrordiag: 
[2025-12-19 18:12:01] 2025-12-19 17:11:29,044 | INFO     | exitcode: 0
[2025-12-19 18:12:01] 2025-12-19 17:11:29,044 | INFO     | exitmsg: OK
[2025-12-19 18:12:01] 2025-12-19 17:11:29,044 | INFO     | cpuconsumptiontime: 22322 s
[2025-12-19 18:12:01] 2025-12-19 17:11:29,044 | INFO     | nevents: 400
[2025-12-19 18:12:01] 2025-12-19 17:11:29,044 | INFO     | neventsw: 0
[2025-12-19 18:12:01] 2025-12-19 17:11:29,044 | INFO     | pid: 877412
[2025-12-19 18:12:01] 2025-12-19 17:11:29,044 | INFO     | pgrp: 877412
[2025-12-19 18:12:01] 2025-12-19 17:11:29,044 | INFO     | corecount: 4
[2025-12-19 18:12:01] 2025-12-19 17:11:29,044 | INFO     | event service: False
[2025-12-19 18:12:01] 2025-12-19 17:11:29,044 | INFO     | sizes: {0: 2283961, 4: 2284223, 11: 2284251, 5839: 2320112, 5842: 2320112, 5849: 2320306}
[2025-12-19 18:12:01] 2025-12-19 17:11:29,044 | INFO     | --------------------------------------------------
[2025-12-19 18:12:01] 2025-12-19 17:11:29,044 | INFO     | 
[2025-12-19 18:12:01] 2025-12-19 17:11:29,044 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-19 18:12:01] 2025-12-19 17:11:29,062 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 18:12:01] 2025-12-19 17:11:29,062 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 18:12:01] 2025-12-19 17:11:29,062 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 18:12:01] 2025-12-19 17:11:29,062 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 18:12:01] 2025-12-19 17:11:29,062 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 18:12:01] 2025-12-19 17:11:29,062 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 18:12:01] 2025-12-19 17:11:29,062 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 18:12:01] 2025-12-19 17:11:29,062 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 18:12:01] 2025-12-19 17:11:29,062 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 18:12:01] 2025-12-19 17:11:29,062 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 18:12:01] 2025-12-19 17:11:29,062 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 18:12:01] 2025-12-19 17:11:29,062 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 18:12:01] 2025-12-19 17:11:29,062 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 18:12:01] 2025-12-19 17:11:29,063 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 18:12:01] 2025-12-19 17:11:29,063 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 18:12:01] 2025-12-19 17:11:29,063 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 18:12:01] 2025-12-19 17:11:29,063 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 18:12:01] 2025-12-19 17:11:29,063 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 18:12:01] 2025-12-19 17:11:29,063 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 18:12:01] 2025-12-19 17:11:29,063 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 18:12:01] 2025-12-19 17:11:29,063 | INFO     | job 6933465145 has completed (purged errors)
[2025-12-19 18:12:01] 2025-12-19 17:11:29,063 | INFO     | overall cleanup function is called
[2025-12-19 18:12:01] 2025-12-19 17:11:30,070 | INFO     | --- collectZombieJob: --- 10, [877412]
[2025-12-19 18:12:01] 2025-12-19 17:11:30,070 | INFO     | zombie collector waiting for pid 877412
[2025-12-19 18:12:01] 2025-12-19 17:11:30,070 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 18:12:01] 2025-12-19 17:11:30,070 | INFO     | collected zombie processes
[2025-12-19 18:12:01] 2025-12-19 17:11:30,070 | INFO     | will attempt to kill all subprocesses of pid=877412
[2025-12-19 18:12:01] 2025-12-19 17:11:30,115 | INFO     | process IDs to be killed: [877412] (in reverse order)
[2025-12-19 18:12:01] 2025-12-19 17:11:30,148 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 18:12:01] 2025-12-19 17:11:30,148 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 18:12:01] 2025-12-19 17:11:30,150 | INFO     | did not find any defunct processes belonging to 877412
[2025-12-19 18:12:01] 2025-12-19 17:11:30,151 | INFO     | did not find any defunct processes belonging to 877412
[2025-12-19 18:12:01] 2025-12-19 17:11:30,152 | INFO     | ready for new job
[2025-12-19 18:12:01] 2025-12-19 17:11:30,152 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 18:12:01] 2025-12-19 17:11:30,152 | INFO     | ***************************************
[2025-12-19 18:12:01] 2025-12-19 17:11:30,152 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 18:12:01] 2025-12-19 17:11:30,152 | INFO     | ***************************************
[2025-12-19 18:12:01] 2025-12-19 17:11:30,153 | INFO     | 
[2025-12-19 18:12:01] 2025-12-19 17:11:30,153 | INFO     | architecture information:
[2025-12-19 18:12:01] 2025-12-19 17:11:30,153 | INFO     | executing command: cat /etc/os-release
[2025-12-19 18:12:01] 2025-12-19 17:11:30,167 | INFO     | cat /etc/os-release:
[2025-12-19 18:12:01] NAME="CentOS Linux"
[2025-12-19 18:12:01] VERSION="7 (Core)"
[2025-12-19 18:12:01] ID="centos"
[2025-12-19 18:12:01] ID_LIKE="rhel fedora"
[2025-12-19 18:12:01] VERSION_ID="7"
[2025-12-19 18:12:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 18:12:01] ANSI_COLOR="0;31"
[2025-12-19 18:12:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 18:12:01] HOME_URL="https://www.centos.org/"
[2025-12-19 18:12:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 18:12:01] 
[2025-12-19 18:12:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 18:12:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 18:12:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 18:12:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 18:12:01] 
[2025-12-19 18:12:01] 2025-12-19 17:11:30,168 | INFO     | ***************************************
[2025-12-19 18:12:01] 2025-12-19 17:11:30,671 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-19 18:12:01] 2025-12-19 17:11:30,688 | INFO     | sufficient remaining disk space (240088252416 B)
[2025-12-19 18:12:01] 2025-12-19 17:11:30,688 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 18:12:01] 2025-12-19 17:11:30,689 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 18:12:01] 2025-12-19 17:11:30,689 | INFO     | update_server=False
[2025-12-19 18:12:01] 2025-12-19 17:11:30,689 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 18:12:01] 2025-12-19 17:11:30,689 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 18:12:01] 2025-12-19 17:11:30,689 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 18:12:01] 2025-12-19 17:11:31,085 | INFO     | all job control threads have been joined
[2025-12-19 18:12:01] 2025-12-19 17:11:31,185 | INFO     | all data control threads have been joined
[2025-12-19 18:12:01] 2025-12-19 17:11:31,371 | INFO     | all payload control threads have been joined
[2025-12-19 18:12:01] 2025-12-19 17:11:31,455 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 18:12:01] 2025-12-19 17:11:31,456 | INFO     | aborting loop
[2025-12-19 18:12:01] 2025-12-19 17:11:31,694 | INFO     | [job] retrieve thread has finished
[2025-12-19 18:12:01] 2025-12-19 17:11:31,695 | INFO     | [job] queue monitor thread has finished
[2025-12-19 18:12:01] 2025-12-19 17:11:31,839 | INFO     | [payload] failed_post thread has finished
[2025-12-19 18:12:01] 2025-12-19 17:11:32,063 | INFO     | [data] copytool_in thread has finished
[2025-12-19 18:12:01] 2025-12-19 17:11:32,090 | INFO     | [job] control thread has finished
[2025-12-19 18:12:01] 2025-12-19 17:11:32,173 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 18:12:01] 2025-12-19 17:11:32,191 | INFO     | [data] control thread has finished
[2025-12-19 18:12:01] 2025-12-19 17:11:32,374 | INFO     | [payload] control thread has finished
[2025-12-19 18:12:01] 2025-12-19 17:11:32,461 | INFO     | [job] job monitor thread has finished
[2025-12-19 18:12:01] 2025-12-19 17:11:32,695 | INFO     | [data] copytool_out thread has finished
[2025-12-19 18:12:01] 2025-12-19 17:11:32,788 | INFO     | [job] validate thread has finished
[2025-12-19 18:12:01] 2025-12-19 17:11:32,896 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 18:12:01] 2025-12-19 17:11:32,985 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 18:12:01] 2025-12-19 17:11:33,017 | INFO     | [payload] validate_post thread has finished
[2025-12-19 18:12:01] 2025-12-19 17:11:33,246 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 18:12:01] 2025-12-19 17:11:37,251 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 18:12:01] 2025-12-19 17:11:40,904 | INFO     | job.realtimelogging is not enabled
[2025-12-19 18:12:01] 2025-12-19 17:11:41,910 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 18:12:01] 2025-12-19 17:11:53,107 | INFO     | [monitor] cgroup control has ended
[2025-12-19 18:12:01] 2025-12-19 17:11:55,048 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140621144577856)>', '<ExcThread(monitor, started 140620366599936)>']
[2025-12-19 18:12:01] 2025-12-19 17:12:00,073 | INFO     | all workflow threads have been joined
[2025-12-19 18:12:01] 2025-12-19 17:12:00,074 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 18:12:01] 2025-12-19 17:12:00,074 | INFO     | traces error code: 0
[2025-12-19 18:12:01] 2025-12-19 17:12:00,074 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 18:12:01] 2025-12-19 17:12:01,536 | INFO     | PID=870841 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-19 18:12:01] 2025-12-19 17:12:01,536 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 18:12:01] 2025-12-19 17:12:01,536 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 18:12:01] 2025-12-19 17:12:01,536 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 18:12:01] 2025-12-19 17:12:01,536 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 18:12:01] 2025-12-19 17:12:01,536 | INFO     | [monitor] control thread has ended
[2025-12-19 18:12:01] 2025-12-19 17:12:01,613 [wrapper] ==== pilot stdout END ====
[2025-12-19 18:12:01] 2025-12-19 17:12:01,617 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 18:12:01] 2025-12-19 17:12:01,621 [wrapper] pilotpid: 870841
[2025-12-19 18:12:01] 2025-12-19 17:12:01,625 [wrapper] Pilot exit status: 0
[2025-12-19 18:12:01] 2025-12-19 17:12:01,636 [wrapper] pandaids: 6933465145
[2025-12-19 18:12:01] 2025-12-19 17:12:01,659 [wrapper] cleanup supervisor_pilot  889697 870842
[2025-12-19 18:12:01] 2025-12-19 17:12:01,662 [wrapper] Test setup, not cleaning
[2025-12-19 18:12:01] 2025-12-19 17:12:01,666 [wrapper] apfmon messages muted
[2025-12-19 18:12:01] 2025-12-19 17:12:01,671 [wrapper] ==== wrapper stdout END ====
[2025-12-19 18:12:01] 2025-12-19 17:12:01,674 [wrapper] ==== wrapper stderr END ====
[2025-12-19 18:12:01]  *** Error codes and diagnostics ***
[2025-12-19 18:12:01]     "exeErrorCode": 0,
[2025-12-19 18:12:01]     "exeErrorDiag": "",
[2025-12-19 18:12:01]     "pilotErrorCode": 0,
[2025-12-19 18:12:01]     "pilotErrorDiag": "",
[2025-12-19 18:12:01]  *** Listing of results directory ***
[2025-12-19 18:12:01] total 432840
[2025-12-19 18:12:01] -rw-r--r-- 1 boinc boinc    579449 Dec 18 11:44 pilot3.tar.gz
[2025-12-19 18:12:01] -rwx------ 1 boinc boinc     36322 Dec 18 11:47 runpilot2-wrapper.sh
[2025-12-19 18:12:01] -rw-r--r-- 1 boinc boinc      5112 Dec 18 11:50 queuedata.json
[2025-12-19 18:12:01] -rw-r--r-- 1 boinc boinc       100 Dec 19 16:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 18:12:01] -rwxr-xr-x 1 boinc boinc      7986 Dec 19 16:33 run_atlas
[2025-12-19 18:12:01] -rw-r--r-- 1 boinc boinc       105 Dec 19 16:33 job.xml
[2025-12-19 18:12:01] -rw-r--r-- 2 boinc boinc 222551781 Dec 19 16:33 EVNT.47898761._000918.pool.root.1
[2025-12-19 18:12:01] -rw-r--r-- 2 boinc boinc    592401 Dec 19 16:33 input.tar.gz
[2025-12-19 18:12:01] -rw-r--r-- 2 boinc boinc     15847 Dec 19 16:33 start_atlas.sh
[2025-12-19 18:12:01] drwxrwx--x 2 boinc boinc      4096 Dec 19 16:33 shared
[2025-12-19 18:12:01] -rw-r--r-- 1 boinc boinc         0 Dec 19 16:33 boinc_setup_complete
[2025-12-19 18:12:01] -rw-r--r-- 1 boinc boinc      6377 Dec 19 16:33 init_data.xml
[2025-12-19 18:12:01] -rw-r--r-- 1 boinc boinc         0 Dec 19 16:33 boinc_lockfile
[2025-12-19 18:12:01] -rw-r--r-- 1 boinc boinc      2508 Dec 19 16:33 pandaJob.out
[2025-12-19 18:12:01] -rw------- 1 boinc boinc    988162 Dec 19 16:33 agis_schedconf.cvmfs.json
[2025-12-19 18:12:01] -rw------- 1 boinc boinc   1516240 Dec 19 16:33 agis_ddmendpoints.agis.ALL.json
[2025-12-19 18:12:01] drwx------ 5 boinc boinc      4096 Dec 19 16:33 pilot3
[2025-12-19 18:12:01] -rw------- 1 boinc boinc 214494998 Dec 19 18:10 HITS.47898763._023890.pool.root.1
[2025-12-19 18:12:01] -rw-r--r-- 1 boinc boinc       529 Dec 19 18:11 boinc_task_state.xml
[2025-12-19 18:12:01] -rw------- 1 boinc boinc      1020 Dec 19 18:11 memory_monitor_summary.json
[2025-12-19 18:12:01] -rw------- 1 boinc boinc        95 Dec 19 18:11 pilot_heartbeat.json
[2025-12-19 18:12:01] -rw------- 1 boinc boinc    282793 Dec 19 18:11 log.47898763._023890.job.log.tgz.1
[2025-12-19 18:12:01] -rw------- 1 boinc boinc      7758 Dec 19 18:11 heartbeat.json
[2025-12-19 18:12:01] -rw-r--r-- 1 boinc boinc        27 Dec 19 18:11 wrapper_checkpoint.txt
[2025-12-19 18:12:01] -rw-r--r-- 1 boinc boinc      8192 Dec 19 18:11 boinc_mmap_file
[2025-12-19 18:12:01] -rw------- 1 boinc boinc       746 Dec 19 18:12 pilotlog.txt
[2025-12-19 18:12:01] -rw------- 1 boinc boinc    851284 Dec 19 18:12 log.47898763._023890.job.log.1
[2025-12-19 18:12:01] -rw------- 1 boinc boinc       357 Dec 19 18:12 output.list
[2025-12-19 18:12:01] -rw-r--r-- 1 boinc boinc       620 Dec 19 18:12 runtime_log
[2025-12-19 18:12:01] -rw------- 1 boinc boinc   1157120 Dec 19 18:12 result.tar.gz
[2025-12-19 18:12:01] -rw-r--r-- 1 boinc boinc      8897 Dec 19 18:12 runtime_log.err
[2025-12-19 18:12:01] -rw------- 1 boinc boinc       659 Dec 19 18:12 cEaNDmFjQq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4zdKDmis5Ngn.diag
[2025-12-19 18:12:01] -rw-r--r-- 1 boinc boinc     22326 Dec 19 18:12 stderr.txt
[2025-12-19 18:12:01] HITS file was successfully produced:
[2025-12-19 18:12:01] -rw------- 1 boinc boinc 214494998 Dec 19 18:10 shared/HITS.pool.root.1
[2025-12-19 18:12:01]  *** Contents of shared directory: ***
[2025-12-19 18:12:01] total 428540
[2025-12-19 18:12:01] -rw-r--r-- 2 boinc boinc 222551781 Dec 19 16:33 ATLAS.root_0
[2025-12-19 18:12:01] -rw-r--r-- 2 boinc boinc    592401 Dec 19 16:33 input.tar.gz
[2025-12-19 18:12:01] -rw-r--r-- 2 boinc boinc     15847 Dec 19 16:33 start_atlas.sh
[2025-12-19 18:12:01] -rw------- 1 boinc boinc 214494998 Dec 19 18:10 HITS.pool.root.1
[2025-12-19 18:12:01] -rw------- 1 boinc boinc   1157120 Dec 19 18:12 result.tar.gz
18:12:03 (867048): run_atlas exited; CPU time 22341.050556
18:12:03 (867048): called boinc_finish(0)

</stderr_txt>
]]>

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