Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:30:15 (656132): wrapper (7.7.26015): starting
10:30:15 (656132): wrapper: running run_atlas (--nthreads 4)
[2025-12-19 10:30:15] Arguments: --nthreads 4
[2025-12-19 10:30:15] Threads: 4
[2025-12-19 10:30:15] Checking for CVMFS
[2025-12-19 10:30:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 10:30:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 10:30:16] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 10:30:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 10:30:16] 2.9.2.0 3086 2139 93504 154183 1 57 33518200 36864000 0 130560 0 1700203 99.991 82345 15902 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-19 10:30:16] CVMFS is ok
[2025-12-19 10:30:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-19 10:30:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-19 10:30:16] Further information can be found at the LHC@home message board.
[2025-12-19 10:30:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 10:30:16] Checking for apptainer binary...
[2025-12-19 10:30:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 10:30:16] Running /usr/bin/apptainer --version
[2025-12-19 10:30:16] apptainer version 1.4.1-1.1
[2025-12-19 10:30:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 10:30:16] cosA131b
[2025-12-19 10:30:16] apptainer works
[2025-12-19 10:30:16] Set ATHENA_PROC_NUMBER=4
[2025-12-19 10:30:16] Set ATHENA_CORE_NUMBER=4
[2025-12-19 10:30:16] Starting ATLAS job with PandaID=6933467994
[2025-12-19 10:30:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 11:47:36]  *** The last 200 lines of the pilot log: ***
[2025-12-19 11:47:36] 2025-12-19 10:46:33,180 | INFO     | transferring file log.47886933._015701.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6933467994/log.47886933._015701.job.log.tgz.1 to /local/data/boinc/
[2025-12-19 11:47:36] 2025-12-19 10:46:33,181 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6933467994/log.47886933._015701.job.log.tgz.1 /local/data/boinc/slots/0/log.47886933._0157
[2025-12-19 11:47:36] 2025-12-19 10:46:33,201 | INFO     | adding to output.list: log.47886933._015701.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/bf/log.47886933._015701.job.log.tg
[2025-12-19 11:47:36] 2025-12-19 10:46:33,201 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-19 11:47:36] 2025-12-19 10:46:33,201 | INFO     | summary of transferred files:
[2025-12-19 11:47:36] 2025-12-19 10:46:33,201 | INFO     |  -- lfn=log.47886933._015701.job.log.tgz.1, status_code=0, status=transferred
[2025-12-19 11:47:36] 2025-12-19 10:46:33,201 | INFO     | stage-out finished correctly
[2025-12-19 11:47:36] 2025-12-19 10:46:33,239 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-19 11:47:36] 2025-12-19 10:46:33,276 | INFO     | job 6933467994 has state=finished
[2025-12-19 11:47:36] 2025-12-19 10:46:33,277 | INFO     | preparing for final server update for job 6933467994 in state='finished'
[2025-12-19 11:47:36] 2025-12-19 10:46:33,277 | INFO     | this job has now completed (state=finished)
[2025-12-19 11:47:36] 2025-12-19 10:46:33,277 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-19 11:47:36] 2025-12-19 10:46:33,277 | INFO     | log transfer has been attempted: DONE
[2025-12-19 11:47:36] 2025-12-19 10:46:33,277 | INFO     | job 6933467994 has finished - writing final server update
[2025-12-19 11:47:36] 2025-12-19 10:46:33,277 | INFO     | total number of processed events: 400 (read)
[2025-12-19 11:47:36] 2025-12-19 10:46:33,278 | INFO     | executing command: lscpu
[2025-12-19 11:47:36] 2025-12-19 10:46:33,297 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-19 11:47:36] 2025-12-19 10:46:34,906 | INFO     | time since job start (4570s) is within the limit (174528.0s)
[2025-12-19 11:47:36] 2025-12-19 10:46:36,912 | INFO     | time since job start (4572s) is within the limit (174528.0s)
[2025-12-19 11:47:36] 2025-12-19 10:46:37,197 | WARNING  | process 666519 can no longer be monitored (due to stat problems) - aborting
[2025-12-19 11:47:36] 2025-12-19 10:46:37,197 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6933467994/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 11:47:36] 2025-12-19 10:46:37,198 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6933467994/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 11:47:36] 2025-12-19 10:46:37,198 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-12-19 11:47:36] 2025-12-19 10:46:37,198 | WARNING  | maxPSS not found in memory monitor output
[2025-12-19 11:47:36] 2025-12-19 10:46:37,198 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2521733 B
[2025-12-19 11:47:36] 2025-12-19 10:46:37,198 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16572 B
[2025-12-19 11:47:36] 2025-12-19 10:46:37,198 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-19 11:47:36] 2025-12-19 10:46:37,958 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-19 11:47:36] 2025-12-19 10:46:37,963 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3445.6157499999995
[2025-12-19 11:47:36] 2025-12-19 10:46:37,965 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6933467994/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 11:47:36] 2025-12-19 10:46:37,965 | INFO     | extracted standard info from prmon json
[2025-12-19 11:47:36] 2025-12-19 10:46:37,965 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 11:47:36] 2025-12-19 10:46:37,966 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 11:47:36] 2025-12-19 10:46:37,967 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 11:47:36] 2025-12-19 10:46:37,967 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 11:47:36] 2025-12-19 10:46:37,968 | INFO     | fitting pss+swap vs Time
[2025-12-19 11:47:36] 2025-12-19 10:46:37,968 | INFO     | sum of square deviations: 97479037.0
[2025-12-19 11:47:36] 2025-12-19 10:46:37,968 | INFO     | sum of deviations: -10320781509.500002
[2025-12-19 11:47:36] 2025-12-19 10:46:37,968 | INFO     | mean x: 1766138995.5
[2025-12-19 11:47:36] 2025-12-19 10:46:37,968 | INFO     | mean y: 2531121.9264705884
[2025-12-19 11:47:36] 2025-12-19 10:46:37,968 | INFO     | intersect: 186995911944.5469
[2025-12-19 11:47:36] 2025-12-19 10:46:37,968 | INFO     | chi2: 0.038877983567358276
[2025-12-19 11:47:36] 2025-12-19 10:46:37,968 | INFO     | current memory leak: -105.88 B/s (using 68 data points, chi2=0.04)
[2025-12-19 11:47:36] 2025-12-19 10:46:37,969 | INFO     | could have reported an average CPU frequency of 3618 MHz (6 samples)
[2025-12-19 11:47:36] 2025-12-19 10:46:37,969 | INFO     | ..............................
[2025-12-19 11:47:36] 2025-12-19 10:46:37,969 | INFO     | . Timing measurements:
[2025-12-19 11:47:36] 2025-12-19 10:46:37,969 | INFO     | . get job = 0 s
[2025-12-19 11:47:36] 2025-12-19 10:46:37,969 | INFO     | . initial setup = 1 s
[2025-12-19 11:47:36] 2025-12-19 10:46:37,969 | INFO     | . payload setup = 4 s
[2025-12-19 11:47:36] 2025-12-19 10:46:37,969 | INFO     | . stage-in = 0 s
[2025-12-19 11:47:36] 2025-12-19 10:46:37,969 | INFO     | . payload execution = 4545 s
[2025-12-19 11:47:36] 2025-12-19 10:46:37,969 | INFO     | . stage-out = 0 s
[2025-12-19 11:47:36] 2025-12-19 10:46:37,969 | INFO     | . log creation = 0 s
[2025-12-19 11:47:36] 2025-12-19 10:46:37,969 | INFO     | ..............................
[2025-12-19 11:47:36] 2025-12-19 10:46:37,983 | INFO     | sufficient remaining disk space (321975746560 B)
[2025-12-19 11:47:36] 2025-12-19 10:46:37,998 | INFO     | work directory size check will use 2768240640 B as a max limit (20% grace limit added, divider=1)
[2025-12-19 11:47:36] 2025-12-19 10:46:38,010 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6933467994: 2817955 B (within 2768240640 B limit)
[2025-12-19 11:47:36] 2025-12-19 10:46:38,010 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6933467994/HITS.47886933._015701.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-19 11:47:36] 2025-12-19 10:46:38,010 | INFO     | total size of present files: 0 B (workdir size: 2817955 B)
[2025-12-19 11:47:36] 2025-12-19 10:46:38,010 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6933467994/HITS.47886933._015701.pool.root.1 since it does not exist
[2025-12-19 11:47:36] 2025-12-19 10:46:38,051 | INFO     | number of running child processes to parent process 666519: 1
[2025-12-19 11:47:36] 2025-12-19 10:46:38,051 | INFO     | maximum number of monitored processes: 6
[2025-12-19 11:47:36] 2025-12-19 10:46:38,051 | INFO     | aborting job monitoring since job object (job id=6933467994) has expired
[2025-12-19 11:47:36] 2025-12-19 10:46:38,470 | INFO     | 
[2025-12-19 11:47:36] 2025-12-19 10:46:38,470 | INFO     | job summary report
[2025-12-19 11:47:36] 2025-12-19 10:46:38,470 | INFO     | --------------------------------------------------
[2025-12-19 11:47:36] 2025-12-19 10:46:38,470 | INFO     | PanDA job id: 6933467994
[2025-12-19 11:47:36] 2025-12-19 10:46:38,470 | INFO     | task id: 47886933
[2025-12-19 11:47:36] 2025-12-19 10:46:38,470 | INFO     | errors: (none)
[2025-12-19 11:47:36] 2025-12-19 10:46:38,471 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 11:47:36] 2025-12-19 10:46:38,471 | INFO     | pilot state: finished 
[2025-12-19 11:47:36] 2025-12-19 10:46:38,471 | INFO     | transexitcode: 0
[2025-12-19 11:47:36] 2025-12-19 10:46:38,471 | INFO     | exeerrorcode: 0
[2025-12-19 11:47:36] 2025-12-19 10:46:38,471 | INFO     | exeerrordiag: 
[2025-12-19 11:47:36] 2025-12-19 10:46:38,471 | INFO     | exitcode: 0
[2025-12-19 11:47:36] 2025-12-19 10:46:38,471 | INFO     | exitmsg: OK
[2025-12-19 11:47:36] 2025-12-19 10:46:38,471 | INFO     | cpuconsumptiontime: 17063 s
[2025-12-19 11:47:36] 2025-12-19 10:46:38,471 | INFO     | nevents: 400
[2025-12-19 11:47:36] 2025-12-19 10:46:38,471 | INFO     | neventsw: 0
[2025-12-19 11:47:36] 2025-12-19 10:46:38,471 | INFO     | pid: 666519
[2025-12-19 11:47:36] 2025-12-19 10:46:38,471 | INFO     | pgrp: 666519
[2025-12-19 11:47:36] 2025-12-19 10:46:38,471 | INFO     | corecount: 4
[2025-12-19 11:47:36] 2025-12-19 10:46:38,471 | INFO     | event service: False
[2025-12-19 11:47:36] 2025-12-19 10:46:38,471 | INFO     | sizes: {0: 2283972, 4: 2284234, 11: 2284262, 4554: 2310527, 4555: 2319587, 4560: 2319725}
[2025-12-19 11:47:36] 2025-12-19 10:46:38,471 | INFO     | --------------------------------------------------
[2025-12-19 11:47:36] 2025-12-19 10:46:38,471 | INFO     | 
[2025-12-19 11:47:36] 2025-12-19 10:46:38,471 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-19 11:47:36] 2025-12-19 10:46:38,493 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 11:47:36] 2025-12-19 10:46:38,493 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 11:47:36] 2025-12-19 10:46:38,493 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 11:47:36] 2025-12-19 10:46:38,493 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 11:47:36] 2025-12-19 10:46:38,493 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 11:47:36] 2025-12-19 10:46:38,493 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 11:47:36] 2025-12-19 10:46:38,493 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 11:47:36] 2025-12-19 10:46:38,493 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 11:47:36] 2025-12-19 10:46:38,493 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 11:47:36] 2025-12-19 10:46:38,493 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 11:47:36] 2025-12-19 10:46:38,493 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 11:47:36] 2025-12-19 10:46:38,493 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 11:47:36] 2025-12-19 10:46:38,493 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 11:47:36] 2025-12-19 10:46:38,493 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 11:47:36] 2025-12-19 10:46:38,493 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 11:47:36] 2025-12-19 10:46:38,493 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 11:47:36] 2025-12-19 10:46:38,494 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 11:47:36] 2025-12-19 10:46:38,494 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 11:47:36] 2025-12-19 10:46:38,494 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 11:47:36] 2025-12-19 10:46:38,494 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 11:47:36] 2025-12-19 10:46:38,494 | INFO     | job 6933467994 has completed (purged errors)
[2025-12-19 11:47:36] 2025-12-19 10:46:38,494 | INFO     | overall cleanup function is called
[2025-12-19 11:47:36] 2025-12-19 10:46:39,500 | INFO     | --- collectZombieJob: --- 10, [666519]
[2025-12-19 11:47:36] 2025-12-19 10:46:39,501 | INFO     | zombie collector waiting for pid 666519
[2025-12-19 11:47:36] 2025-12-19 10:46:39,501 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 11:47:36] 2025-12-19 10:46:39,501 | INFO     | collected zombie processes
[2025-12-19 11:47:36] 2025-12-19 10:46:39,501 | INFO     | will attempt to kill all subprocesses of pid=666519
[2025-12-19 11:47:36] 2025-12-19 10:46:39,545 | INFO     | process IDs to be killed: [666519] (in reverse order)
[2025-12-19 11:47:36] 2025-12-19 10:46:39,578 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 11:47:36] 2025-12-19 10:46:39,579 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 11:47:36] 2025-12-19 10:46:39,580 | INFO     | did not find any defunct processes belonging to 666519
[2025-12-19 11:47:36] 2025-12-19 10:46:39,581 | INFO     | did not find any defunct processes belonging to 666519
[2025-12-19 11:47:36] 2025-12-19 10:46:39,582 | INFO     | ready for new job
[2025-12-19 11:47:36] 2025-12-19 10:46:39,582 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 11:47:36] 2025-12-19 10:46:39,582 | INFO     | ***************************************
[2025-12-19 11:47:36] 2025-12-19 10:46:39,582 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 11:47:36] 2025-12-19 10:46:39,582 | INFO     | ***************************************
[2025-12-19 11:47:36] 2025-12-19 10:46:39,582 | INFO     | 
[2025-12-19 11:47:36] 2025-12-19 10:46:39,583 | INFO     | architecture information:
[2025-12-19 11:47:36] 2025-12-19 10:46:39,583 | INFO     | executing command: cat /etc/os-release
[2025-12-19 11:47:36] 2025-12-19 10:46:39,597 | INFO     | cat /etc/os-release:
[2025-12-19 11:47:36] NAME="CentOS Linux"
[2025-12-19 11:47:36] VERSION="7 (Core)"
[2025-12-19 11:47:36] ID="centos"
[2025-12-19 11:47:36] ID_LIKE="rhel fedora"
[2025-12-19 11:47:36] VERSION_ID="7"
[2025-12-19 11:47:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 11:47:36] ANSI_COLOR="0;31"
[2025-12-19 11:47:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 11:47:36] HOME_URL="https://www.centos.org/"
[2025-12-19 11:47:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 11:47:36] 
[2025-12-19 11:47:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 11:47:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 11:47:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 11:47:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 11:47:36] 
[2025-12-19 11:47:36] 2025-12-19 10:46:39,597 | INFO     | ***************************************
[2025-12-19 11:47:36] 2025-12-19 10:46:40,101 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-19 11:47:36] 2025-12-19 10:46:40,118 | INFO     | sufficient remaining disk space (321978892288 B)
[2025-12-19 11:47:36] 2025-12-19 10:46:40,119 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 11:47:36] 2025-12-19 10:46:40,119 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 11:47:36] 2025-12-19 10:46:40,119 | INFO     | update_server=False
[2025-12-19 11:47:36] 2025-12-19 10:46:40,119 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 11:47:36] 2025-12-19 10:46:40,119 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 11:47:36] 2025-12-19 10:46:40,555 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-19 11:47:36] 2025-12-19 10:46:40,556 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-19 11:47:36] 2025-12-19 10:46:40,556 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 11:47:36] 2025-12-19 10:46:40,556 | INFO     | will abort loop
[2025-12-19 11:47:36] 2025-12-19 10:46:40,673 | INFO     | all data control threads have been joined
[2025-12-19 11:47:36] 2025-12-19 10:46:41,048 | INFO     | all payload control threads have been joined
[2025-12-19 11:47:36] 2025-12-19 10:46:41,125 | INFO     | [job] retrieve thread has finished
[2025-12-19 11:47:36] 2025-12-19 10:46:41,170 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 11:47:36] 2025-12-19 10:46:41,226 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 11:47:36] 2025-12-19 10:46:41,251 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 11:47:36] 2025-12-19 10:46:41,443 | INFO     | all job control threads have been joined
[2025-12-19 11:47:36] 2025-12-19 10:46:41,561 | INFO     | [job] job monitor thread has finished
[2025-12-19 11:47:36] 2025-12-19 10:46:41,679 | INFO     | [data] control thread has finished
[2025-12-19 11:47:36] 2025-12-19 10:46:41,797 | INFO     | [data] copytool_in thread has finished
[2025-12-19 11:47:36] 2025-12-19 10:46:41,836 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 11:47:36] 2025-12-19 10:46:42,050 | INFO     | [payload] failed_post thread has finished
[2025-12-19 11:47:36] 2025-12-19 10:46:42,054 | INFO     | [payload] control thread has finished
[2025-12-19 11:47:36] 2025-12-19 10:46:42,449 | INFO     | [job] control thread has finished
[2025-12-19 11:47:36] 2025-12-19 10:46:42,522 | INFO     | [job] validate thread has finished
[2025-12-19 11:47:36] 2025-12-19 10:46:42,603 | INFO     | [payload] validate_post thread has finished
[2025-12-19 11:47:36] 2025-12-19 10:46:43,022 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 11:47:36] 2025-12-19 10:46:43,258 | INFO     | [data] copytool_out thread has finished
[2025-12-19 11:47:36] 2025-12-19 10:46:44,028 | INFO     | [job] queue monitor thread has finished
[2025-12-19 11:47:36] 2025-12-19 10:46:44,122 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 11:47:36] 2025-12-19 10:46:50,386 | INFO     | job.realtimelogging is not enabled
[2025-12-19 11:47:36] 2025-12-19 10:46:51,392 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 11:47:36] 2025-12-19 10:47:10,044 | INFO     | PID=659942 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-19 11:47:36] 2025-12-19 10:47:10,044 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 11:47:36] 2025-12-19 10:47:10,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 11:47:36] 2025-12-19 10:47:10,045 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 11:47:36] 2025-12-19 10:47:30,119 | INFO     | [monitor] cgroup control has ended
[2025-12-19 11:47:36] 2025-12-19 10:47:30,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139657792800576)>', '<ExcThread(monitor, started 139657127896832)>']
[2025-12-19 11:47:36] 2025-12-19 10:47:31,152 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 11:47:36] 2025-12-19 10:47:31,152 | INFO     | [monitor] control thread has ended
[2025-12-19 11:47:36] 2025-12-19 10:47:35,883 | INFO     | all workflow threads have been joined
[2025-12-19 11:47:36] 2025-12-19 10:47:35,883 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 11:47:36] 2025-12-19 10:47:35,883 | INFO     | traces error code: 0
[2025-12-19 11:47:36] 2025-12-19 10:47:35,883 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 11:47:36] 2025-12-19 10:47:35,965 [wrapper] ==== pilot stdout END ====
[2025-12-19 11:47:36] 2025-12-19 10:47:35,969 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 11:47:36] 2025-12-19 10:47:35,973 [wrapper] pilotpid: 659942
[2025-12-19 11:47:36] 2025-12-19 10:47:35,977 [wrapper] Pilot exit status: 0
[2025-12-19 11:47:36] 2025-12-19 10:47:35,989 [wrapper] pandaids: 6933467994
[2025-12-19 11:47:36] 2025-12-19 10:47:36,012 [wrapper] cleanup supervisor_pilot  678576 659943
[2025-12-19 11:47:36] 2025-12-19 10:47:36,016 [wrapper] Test setup, not cleaning
[2025-12-19 11:47:36] 2025-12-19 10:47:36,020 [wrapper] apfmon messages muted
[2025-12-19 11:47:36] 2025-12-19 10:47:36,024 [wrapper] ==== wrapper stdout END ====
[2025-12-19 11:47:36] 2025-12-19 10:47:36,028 [wrapper] ==== wrapper stderr END ====
[2025-12-19 11:47:36]  *** Error codes and diagnostics ***
[2025-12-19 11:47:36]     "exeErrorCode": 0,
[2025-12-19 11:47:36]     "exeErrorDiag": "",
[2025-12-19 11:47:36]     "pilotErrorCode": 0,
[2025-12-19 11:47:36]     "pilotErrorDiag": "",
[2025-12-19 11:47:36]  *** Listing of results directory ***
[2025-12-19 11:47:36] total 338228
[2025-12-19 11:47:36] -rw-r--r-- 1 boinc boinc    579449 Dec 18 11:44 pilot3.tar.gz
[2025-12-19 11:47:36] -rwx------ 1 boinc boinc     36322 Dec 18 11:47 runpilot2-wrapper.sh
[2025-12-19 11:47:36] -rw-r--r-- 1 boinc boinc      5112 Dec 18 11:50 queuedata.json
[2025-12-19 11:47:36] -rw-r--r-- 1 boinc boinc       100 Dec 19 10:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 11:47:36] -rwxr-xr-x 1 boinc boinc      7986 Dec 19 10:30 run_atlas
[2025-12-19 11:47:36] -rw-r--r-- 1 boinc boinc       105 Dec 19 10:30 job.xml
[2025-12-19 11:47:36] -rw-r--r-- 2 boinc boinc 192082604 Dec 19 10:30 EVNT.47886929._000649.pool.root.1
[2025-12-19 11:47:36] -rw-r--r-- 2 boinc boinc    592395 Dec 19 10:30 input.tar.gz
[2025-12-19 11:47:36] -rw-r--r-- 2 boinc boinc     15847 Dec 19 10:30 start_atlas.sh
[2025-12-19 11:47:36] drwxrwx--x 2 boinc boinc      4096 Dec 19 10:30 shared
[2025-12-19 11:47:36] -rw-r--r-- 1 boinc boinc         0 Dec 19 10:30 boinc_setup_complete
[2025-12-19 11:47:36] -rw-r--r-- 1 boinc boinc      6378 Dec 19 10:30 init_data.xml
[2025-12-19 11:47:36] -rw-r--r-- 1 boinc boinc         0 Dec 19 10:30 boinc_lockfile
[2025-12-19 11:47:36] -rw-r--r-- 1 boinc boinc      2515 Dec 19 10:30 pandaJob.out
[2025-12-19 11:47:36] -rw------- 1 boinc boinc    988887 Dec 19 10:30 agis_schedconf.cvmfs.json
[2025-12-19 11:47:36] -rw------- 1 boinc boinc   1516240 Dec 19 10:30 agis_ddmendpoints.agis.ALL.json
[2025-12-19 11:47:36] drwx------ 5 boinc boinc      4096 Dec 19 10:30 pilot3
[2025-12-19 11:47:36] -rw------- 1 boinc boinc 148462383 Dec 19 11:46 HITS.47886933._015701.pool.root.1
[2025-12-19 11:47:36] -rw-r--r-- 1 boinc boinc       529 Dec 19 11:46 boinc_task_state.xml
[2025-12-19 11:47:36] -rw------- 1 boinc boinc      1020 Dec 19 11:46 memory_monitor_summary.json
[2025-12-19 11:47:36] -rw------- 1 boinc boinc    266776 Dec 19 11:46 log.47886933._015701.job.log.tgz.1
[2025-12-19 11:47:36] -rw------- 1 boinc boinc      7764 Dec 19 11:46 heartbeat.json
[2025-12-19 11:47:36] -rw------- 1 boinc boinc        95 Dec 19 11:47 pilot_heartbeat.json
[2025-12-19 11:47:36] -rw-r--r-- 1 boinc boinc      8192 Dec 19 11:47 boinc_mmap_file
[2025-12-19 11:47:36] -rw-r--r-- 1 boinc boinc        27 Dec 19 11:47 wrapper_checkpoint.txt
[2025-12-19 11:47:36] -rw------- 1 boinc boinc      5009 Dec 19 11:47 pilotlog.txt
[2025-12-19 11:47:36] -rw------- 1 boinc boinc    675435 Dec 19 11:47 log.47886933._015701.job.log.1
[2025-12-19 11:47:36] -rw------- 1 boinc boinc       357 Dec 19 11:47 output.list
[2025-12-19 11:47:36] -rw-r--r-- 1 boinc boinc       620 Dec 19 11:47 runtime_log
[2025-12-19 11:47:36] -rw------- 1 boinc boinc    962560 Dec 19 11:47 result.tar.gz
[2025-12-19 11:47:36] -rw------- 1 boinc boinc       660 Dec 19 11:47 zdDODm5iQq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdydKDmy0Sshm.diag
[2025-12-19 11:47:36] -rw-r--r-- 1 boinc boinc      8907 Dec 19 11:47 runtime_log.err
[2025-12-19 11:47:36] -rw-r--r-- 1 boinc boinc     22766 Dec 19 11:47 stderr.txt
[2025-12-19 11:47:36] HITS file was successfully produced:
[2025-12-19 11:47:36] -rw------- 1 boinc boinc 148462383 Dec 19 11:46 shared/HITS.pool.root.1
[2025-12-19 11:47:36]  *** Contents of shared directory: ***
[2025-12-19 11:47:36] total 334112
[2025-12-19 11:47:36] -rw-r--r-- 2 boinc boinc 192082604 Dec 19 10:30 ATLAS.root_0
[2025-12-19 11:47:36] -rw-r--r-- 2 boinc boinc    592395 Dec 19 10:30 input.tar.gz
[2025-12-19 11:47:36] -rw-r--r-- 2 boinc boinc     15847 Dec 19 10:30 start_atlas.sh
[2025-12-19 11:47:36] -rw------- 1 boinc boinc 148462383 Dec 19 11:46 HITS.pool.root.1
[2025-12-19 11:47:36] -rw------- 1 boinc boinc    962560 Dec 19 11:47 result.tar.gz
11:47:37 (656132): run_atlas exited; CPU time 17077.117167
11:47:37 (656132): called boinc_finish(0)

</stderr_txt>
]]>

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