Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:11:10 (1372118): wrapper (7.7.26015): starting
08:11:10 (1372118): wrapper: running run_atlas (--nthreads 3)
[2025-12-19 08:11:10] Arguments: --nthreads 3
[2025-12-19 08:11:10] Threads: 3
[2025-12-19 08:11:10] Checking for CVMFS
[2025-12-19 08:11:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 08:12:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 08:12:12] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 08:12:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 08:12:13] 2.13.3.0 1372336 0 29496 154168 3 1 28556551 31457281 0 130560 0 0 0.000 1337 33 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-12-19 08:12:13] CVMFS is ok
[2025-12-19 08:12:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 08:12:13] Checking for apptainer binary...
[2025-12-19 08:12:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 08:12:13] Running /usr/bin/apptainer --version
[2025-12-19 08:12:13] apptainer version 1.4.4-1.el9
[2025-12-19 08:12:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 08:12:13] testio001
[2025-12-19 08:12:13] apptainer works
[2025-12-19 08:12:13] Set ATHENA_PROC_NUMBER=3
[2025-12-19 08:12:13] Set ATHENA_CORE_NUMBER=3
[2025-12-19 08:12:13] Starting ATLAS job with PandaID=6933464326
[2025-12-19 08:12:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 10:25:39]  *** The last 200 lines of the pilot log: ***
[2025-12-19 10:25:39] 2025-12-19 01:24:25,852 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 10:25:39] 2025-12-19 01:24:27,498 | INFO     | time since job start (7822s) is within the limit (174528.0s)
[2025-12-19 10:25:39] 2025-12-19 01:24:28,354 | INFO     | monitor loop #569: job 0:6933464326 is in state 'finished'
[2025-12-19 10:25:39] 2025-12-19 01:24:28,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 10:25:39] 2025-12-19 01:24:29,503 | INFO     | time since job start (7824s) is within the limit (174528.0s)
[2025-12-19 10:25:39] 2025-12-19 01:24:30,857 | INFO     | monitor loop #570: job 0:6933464326 is in state 'finished'
[2025-12-19 10:25:39] 2025-12-19 01:24:30,857 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 10:25:39] 2025-12-19 01:24:31,508 | INFO     | time since job start (7826s) is within the limit (174528.0s)
[2025-12-19 10:25:39] 2025-12-19 01:24:31,645 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-19 10:25:39] 2025-12-19 01:24:31,645 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3669.1385
[2025-12-19 10:25:39] 2025-12-19 01:24:31,646 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6933464326/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 10:25:39] 2025-12-19 01:24:31,646 | INFO     | extracted standard info from prmon json
[2025-12-19 10:25:39] 2025-12-19 01:24:31,646 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 10:25:39] 2025-12-19 01:24:31,646 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 10:25:39] 2025-12-19 01:24:31,647 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 10:25:39] 2025-12-19 01:24:31,647 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 10:25:39] 2025-12-19 01:24:31,648 | INFO     | fitting pss+swap vs Time
[2025-12-19 10:25:39] 2025-12-19 01:24:31,648 | INFO     | sum of square deviations: 650250553.9296875
[2025-12-19 10:25:39] 2025-12-19 01:24:31,648 | INFO     | sum of deviations: 9792884361.359375
[2025-12-19 10:25:39] 2025-12-19 01:24:31,648 | INFO     | mean x: 1766103541.5234375
[2025-12-19 10:25:39] 2025-12-19 01:24:31,648 | INFO     | mean y: 2344756.546875
[2025-12-19 10:25:39] 2025-12-19 01:24:31,648 | INFO     | intersect: -26595476110.81749
[2025-12-19 10:25:39] 2025-12-19 01:24:31,649 | INFO     | chi2: 2.265623758201261
[2025-12-19 10:25:39] 2025-12-19 01:24:31,649 | INFO     | sum of square deviations: 576984978.9268268
[2025-12-19 10:25:39] 2025-12-19 01:24:31,649 | INFO     | sum of deviations: 10142330864.609758
[2025-12-19 10:25:39] 2025-12-19 01:24:31,649 | INFO     | mean x: 1766103389.0243902
[2025-12-19 10:25:39] 2025-12-19 01:24:31,649 | INFO     | mean y: 2345484.463414634
[2025-12-19 10:25:39] 2025-12-19 01:24:31,649 | INFO     | intersect: -31042492018.777058
[2025-12-19 10:25:39] 2025-12-19 01:24:31,649 | INFO     | chi2: 2.2698666592058805
[2025-12-19 10:25:39] 2025-12-19 01:24:31,649 | INFO     | current chi2=2.2698666592058805 (change=-0.18727297457314754 %)
[2025-12-19 10:25:39] 2025-12-19 01:24:31,649 | INFO     | right removable region: 122
[2025-12-19 10:25:39] 2025-12-19 01:24:31,649 | INFO     | sum of square deviations: 576983148.9268268
[2025-12-19 10:25:39] 2025-12-19 01:24:31,650 | INFO     | sum of deviations: -16759329653.21951
[2025-12-19 10:25:39] 2025-12-19 01:24:31,650 | INFO     | mean x: 1766103694.0243902
[2025-12-19 10:25:39] 2025-12-19 01:24:31,650 | INFO     | mean y: 2399615.073170732
[2025-12-19 10:25:39] 2025-12-19 01:24:31,650 | INFO     | intersect: 51301495723.81793
[2025-12-19 10:25:39] 2025-12-19 01:24:31,650 | INFO     | chi2: 0.05107715661682039
[2025-12-19 10:25:39] 2025-12-19 01:24:31,650 | INFO     | current chi2=0.05107715661682039 (change=97.74555874814044 %)
[2025-12-19 10:25:39] 2025-12-19 01:24:31,650 | INFO     | sum of square deviations: 509436781.42372864
[2025-12-19 10:25:39] 2025-12-19 01:24:31,650 | INFO     | sum of deviations: -16226971303.627127
[2025-12-19 10:25:39] 2025-12-19 01:24:31,650 | INFO     | mean x: 1766103846.5254238
[2025-12-19 10:25:39] 2025-12-19 01:24:31,650 | INFO     | mean y: 2398373.5423728814
[2025-12-19 10:25:39] 2025-12-19 01:24:31,650 | INFO     | intersect: 56257693400.92784
[2025-12-19 10:25:39] 2025-12-19 01:24:31,650 | INFO     | chi2: 0.04375915480847751
[2025-12-19 10:25:39] 2025-12-19 01:24:31,651 | INFO     | current chi2=0.04375915480847751 (change=14.327347669805423 %)
[2025-12-19 10:25:39] 2025-12-19 01:24:31,651 | INFO     | left removable region: 20
[2025-12-19 10:25:39] 2025-12-19 01:24:31,651 | INFO     | sum of square deviations: 329027085.41176385
[2025-12-19 10:25:39] 2025-12-19 01:24:31,651 | INFO     | sum of deviations: -12034495763.588234
[2025-12-19 10:25:39] 2025-12-19 01:24:31,651 | INFO     | mean x: 1766103968.5294118
[2025-12-19 10:25:39] 2025-12-19 01:24:31,651 | INFO     | mean y: 2394577.029411765
[2025-12-19 10:25:39] 2025-12-19 01:24:31,651 | INFO     | intersect: 64599419167.64892
[2025-12-19 10:25:39] 2025-12-19 01:24:31,651 | INFO     | chi2: 0.040052424960290295
[2025-12-19 10:25:39] 2025-12-19 01:24:31,651 | INFO     | current memory leak: -36.58 B/s (using 102 data points, chi2=0.04)
[2025-12-19 10:25:39] 2025-12-19 01:24:31,651 | INFO     | could have reported an average CPU frequency of 3623 MHz (8 samples)
[2025-12-19 10:25:39] 2025-12-19 01:24:31,651 | INFO     | ..............................
[2025-12-19 10:25:39] 2025-12-19 01:24:31,651 | INFO     | . Timing measurements:
[2025-12-19 10:25:39] 2025-12-19 01:24:31,652 | INFO     | . get job = 0 s
[2025-12-19 10:25:39] 2025-12-19 01:24:31,652 | INFO     | . initial setup = 6 s
[2025-12-19 10:25:39] 2025-12-19 01:24:31,652 | INFO     | . payload setup = 4 s
[2025-12-19 10:25:39] 2025-12-19 01:24:31,652 | INFO     | . stage-in = 0 s
[2025-12-19 10:25:39] 2025-12-19 01:24:31,652 | INFO     | . payload execution = 7784 s
[2025-12-19 10:25:39] 2025-12-19 01:24:31,652 | INFO     | . stage-out = 0 s
[2025-12-19 10:25:39] 2025-12-19 01:24:31,652 | INFO     | . log creation = 0 s
[2025-12-19 10:25:39] 2025-12-19 01:24:31,652 | INFO     | ..............................
[2025-12-19 10:25:39] 2025-12-19 01:24:31,743 | INFO     | 
[2025-12-19 10:25:39] 2025-12-19 01:24:31,743 | INFO     | job summary report
[2025-12-19 10:25:39] 2025-12-19 01:24:31,743 | INFO     | --------------------------------------------------
[2025-12-19 10:25:39] 2025-12-19 01:24:31,743 | INFO     | PanDA job id: 6933464326
[2025-12-19 10:25:39] 2025-12-19 01:24:31,743 | INFO     | task id: 47886933
[2025-12-19 10:25:39] 2025-12-19 01:24:31,743 | INFO     | errors: (none)
[2025-12-19 10:25:39] 2025-12-19 01:24:31,743 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 10:25:39] 2025-12-19 01:24:31,743 | INFO     | pilot state: finished 
[2025-12-19 10:25:39] 2025-12-19 01:24:31,743 | INFO     | transexitcode: 0
[2025-12-19 10:25:39] 2025-12-19 01:24:31,744 | INFO     | exeerrorcode: 0
[2025-12-19 10:25:39] 2025-12-19 01:24:31,744 | INFO     | exeerrordiag: 
[2025-12-19 10:25:39] 2025-12-19 01:24:31,744 | INFO     | exitcode: 0
[2025-12-19 10:25:39] 2025-12-19 01:24:31,744 | INFO     | exitmsg: OK
[2025-12-19 10:25:39] 2025-12-19 01:24:31,744 | INFO     | cpuconsumptiontime: 20704 s
[2025-12-19 10:25:39] 2025-12-19 01:24:31,744 | INFO     | nevents: 400
[2025-12-19 10:25:39] 2025-12-19 01:24:31,744 | INFO     | neventsw: 0
[2025-12-19 10:25:39] 2025-12-19 01:24:31,744 | INFO     | pid: 1382920
[2025-12-19 10:25:39] 2025-12-19 01:24:31,744 | INFO     | pgrp: 1382920
[2025-12-19 10:25:39] 2025-12-19 01:24:31,744 | INFO     | corecount: 3
[2025-12-19 10:25:39] 2025-12-19 01:24:31,744 | INFO     | event service: False
[2025-12-19 10:25:39] 2025-12-19 01:24:31,744 | INFO     | sizes: {0: 2283969, 4: 2284231, 11: 2284259, 7792: 2311942, 7793: 2320996, 7813: 2321134}
[2025-12-19 10:25:39] 2025-12-19 01:24:31,744 | INFO     | --------------------------------------------------
[2025-12-19 10:25:39] 2025-12-19 01:24:31,744 | INFO     | 
[2025-12-19 10:25:39] 2025-12-19 01:24:31,744 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-12-19 10:25:39] 2025-12-19 01:24:31,753 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 10:25:39] 2025-12-19 01:24:31,754 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 10:25:39] 2025-12-19 01:24:31,754 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 10:25:39] 2025-12-19 01:24:31,754 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 10:25:39] 2025-12-19 01:24:31,754 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 10:25:39] 2025-12-19 01:24:31,754 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 10:25:39] 2025-12-19 01:24:31,754 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 10:25:39] 2025-12-19 01:24:31,754 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 10:25:39] 2025-12-19 01:24:31,754 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 10:25:39] 2025-12-19 01:24:31,754 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 10:25:39] 2025-12-19 01:24:31,754 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 10:25:39] 2025-12-19 01:24:31,754 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 10:25:39] 2025-12-19 01:24:31,754 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 10:25:39] 2025-12-19 01:24:31,754 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 10:25:39] 2025-12-19 01:24:31,754 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 10:25:39] 2025-12-19 01:24:31,754 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 10:25:39] 2025-12-19 01:24:31,754 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 10:25:39] 2025-12-19 01:24:31,754 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 10:25:39] 2025-12-19 01:24:31,754 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 10:25:39] 2025-12-19 01:24:31,754 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 10:25:39] 2025-12-19 01:24:31,755 | INFO     | job 6933464326 has completed (purged errors)
[2025-12-19 10:25:39] 2025-12-19 01:24:31,755 | INFO     | overall cleanup function is called
[2025-12-19 10:25:39] 2025-12-19 01:24:32,760 | INFO     | --- collectZombieJob: --- 10, [1382920]
[2025-12-19 10:25:39] 2025-12-19 01:24:32,760 | INFO     | zombie collector waiting for pid 1382920
[2025-12-19 10:25:39] 2025-12-19 01:24:32,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 10:25:39] 2025-12-19 01:24:32,760 | INFO     | collected zombie processes
[2025-12-19 10:25:39] 2025-12-19 01:24:32,760 | INFO     | will attempt to kill all subprocesses of pid=1382920
[2025-12-19 10:25:39] 2025-12-19 01:24:32,792 | INFO     | process IDs to be killed: [1382920] (in reverse order)
[2025-12-19 10:25:39] 2025-12-19 01:24:32,809 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 10:25:39] 2025-12-19 01:24:32,810 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 10:25:39] 2025-12-19 01:24:32,811 | INFO     | did not find any defunct processes belonging to 1382920
[2025-12-19 10:25:39] 2025-12-19 01:24:32,812 | INFO     | did not find any defunct processes belonging to 1382920
[2025-12-19 10:25:39] 2025-12-19 01:24:32,812 | INFO     | ready for new job
[2025-12-19 10:25:39] 2025-12-19 01:24:32,812 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 10:25:39] 2025-12-19 01:24:32,813 | INFO     | ***************************************
[2025-12-19 10:25:39] 2025-12-19 01:24:32,813 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 10:25:39] 2025-12-19 01:24:32,813 | INFO     | ***************************************
[2025-12-19 10:25:39] 2025-12-19 01:24:32,813 | INFO     | 
[2025-12-19 10:25:39] 2025-12-19 01:24:32,813 | INFO     | architecture information:
[2025-12-19 10:25:39] 2025-12-19 01:24:32,813 | INFO     | executing command: cat /etc/os-release
[2025-12-19 10:25:39] 2025-12-19 01:24:32,820 | INFO     | cat /etc/os-release:
[2025-12-19 10:25:39] NAME="CentOS Linux"
[2025-12-19 10:25:39] VERSION="7 (Core)"
[2025-12-19 10:25:39] ID="centos"
[2025-12-19 10:25:39] ID_LIKE="rhel fedora"
[2025-12-19 10:25:39] VERSION_ID="7"
[2025-12-19 10:25:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 10:25:39] ANSI_COLOR="0;31"
[2025-12-19 10:25:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 10:25:39] HOME_URL="https://www.centos.org/"
[2025-12-19 10:25:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 10:25:39] 
[2025-12-19 10:25:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 10:25:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 10:25:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 10:25:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 10:25:39] 
[2025-12-19 10:25:39] 2025-12-19 01:24:32,820 | INFO     | ***************************************
[2025-12-19 10:25:39] 2025-12-19 01:24:33,323 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-12-19 10:25:39] 2025-12-19 01:24:33,332 | INFO     | sufficient remaining disk space (114730991616 B)
[2025-12-19 10:25:39] 2025-12-19 01:24:33,332 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 10:25:39] 2025-12-19 01:24:33,332 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 10:25:39] 2025-12-19 01:24:33,332 | INFO     | update_server=False
[2025-12-19 10:25:39] 2025-12-19 01:24:33,332 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 10:25:39] 2025-12-19 01:24:33,333 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-19 10:25:39] 2025-12-19 01:24:33,333 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 10:25:39] 2025-12-19 01:24:33,333 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 10:25:39] 2025-12-19 01:24:33,333 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 10:25:39] 2025-12-19 01:24:33,333 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 10:25:39] 2025-12-19 01:24:33,360 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-19 10:25:39] 2025-12-19 01:24:33,360 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-19 10:25:39] 2025-12-19 01:24:33,360 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 10:25:39] 2025-12-19 01:24:33,360 | INFO     | will abort loop
[2025-12-19 10:25:39] 2025-12-19 01:24:33,743 | INFO     | all job control threads have been joined
[2025-12-19 10:25:39] 2025-12-19 01:24:33,994 | INFO     | all data control threads have been joined
[2025-12-19 10:25:39] 2025-12-19 01:24:34,334 | INFO     | [job] retrieve thread has finished
[2025-12-19 10:25:39] 2025-12-19 01:24:34,337 | INFO     | [job] queue monitor thread has finished
[2025-12-19 10:25:39] 2025-12-19 01:24:34,365 | INFO     | [job] job monitor thread has finished
[2025-12-19 10:25:39] 2025-12-19 01:24:34,611 | INFO     | all payload control threads have been joined
[2025-12-19 10:25:39] 2025-12-19 01:24:34,748 | INFO     | [job] control thread has finished
[2025-12-19 10:25:39] 2025-12-19 01:24:34,766 | INFO     | [payload] validate_post thread has finished
[2025-12-19 10:25:39] 2025-12-19 01:24:34,775 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 10:25:39] 2025-12-19 01:24:34,828 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 10:25:39] 2025-12-19 01:24:34,996 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 10:25:39] 2025-12-19 01:24:34,999 | INFO     | [data] control thread has finished
[2025-12-19 10:25:39] 2025-12-19 01:24:35,212 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 10:25:39] 2025-12-19 01:24:35,332 | INFO     | [payload] failed_post thread has finished
[2025-12-19 10:25:39] 2025-12-19 01:24:35,337 | INFO     | [job] validate thread has finished
[2025-12-19 10:25:39] 2025-12-19 01:24:35,524 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 10:25:39] 2025-12-19 01:24:35,524 | INFO     | [data] copytool_in thread has finished
[2025-12-19 10:25:39] 2025-12-19 01:24:35,612 | INFO     | [payload] control thread has finished
[2025-12-19 10:25:39] 2025-12-19 01:24:35,796 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 10:25:39] 2025-12-19 01:24:36,780 | INFO     | [data] copytool_out thread has finished
[2025-12-19 10:25:39] 2025-12-19 01:24:39,801 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 10:25:39] 2025-12-19 01:25:33,065 | INFO     | [monitor] cgroup control has ended
[2025-12-19 10:25:39] 2025-12-19 01:25:34,170 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140197679290176)>', '<ExcThread(monitor, started 140197303928576)>']
[2025-12-19 10:25:39] 2025-12-19 01:25:34,630 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 10:25:39] 2025-12-19 01:25:34,630 | INFO     | [monitor] control thread has ended
[2025-12-19 10:25:39] 2025-12-19 01:25:39,195 | INFO     | all workflow threads have been joined
[2025-12-19 10:25:39] 2025-12-19 01:25:39,195 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 10:25:39] 2025-12-19 01:25:39,195 | INFO     | traces error code: 0
[2025-12-19 10:25:39] 2025-12-19 01:25:39,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 10:25:39] 2025-12-19 01:25:39,256 [wrapper] ==== pilot stdout END ====
[2025-12-19 10:25:39] 2025-12-19 01:25:39,258 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 10:25:39] 2025-12-19 01:25:39,259 [wrapper] pilotpid: 1376388
[2025-12-19 10:25:39] 2025-12-19 01:25:39,260 [wrapper] Pilot exit status: 0
[2025-12-19 10:25:39] 2025-12-19 01:25:39,266 [wrapper] pandaids: 6933464326
[2025-12-19 10:25:39] 2025-12-19 01:25:39,279 [wrapper] cleanup supervisor_pilot 1397134 1376389
[2025-12-19 10:25:39] 2025-12-19 01:25:39,281 [wrapper] Test setup, not cleaning
[2025-12-19 10:25:39] 2025-12-19 01:25:39,283 [wrapper] apfmon messages muted
[2025-12-19 10:25:39] 2025-12-19 01:25:39,284 [wrapper] ==== wrapper stdout END ====
[2025-12-19 10:25:39] 2025-12-19 01:25:39,285 [wrapper] ==== wrapper stderr END ====
[2025-12-19 10:25:39]  *** Error codes and diagnostics ***
[2025-12-19 10:25:39]     "exeErrorCode": 0,
[2025-12-19 10:25:39]     "exeErrorDiag": "",
[2025-12-19 10:25:39]     "pilotErrorCode": 0,
[2025-12-19 10:25:39]     "pilotErrorDiag": "",
[2025-12-19 10:25:39]  *** Listing of results directory ***
[2025-12-19 10:25:39] total 337776
[2025-12-19 10:25:39] -rw-r--r--. 1 boinc boinc    579449 Dec 18 17:05 pilot3.tar.gz
[2025-12-19 10:25:39] -rwx------. 1 boinc boinc     36322 Dec 18 17:08 runpilot2-wrapper.sh
[2025-12-19 10:25:39] -rw-r--r--. 1 boinc boinc      5112 Dec 18 17:11 queuedata.json
[2025-12-19 10:25:39] -rw-r--r--. 1 boinc boinc       100 Dec 19 08:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 10:25:39] -rwxr-xr-x. 1 boinc boinc      7986 Dec 19 08:11 run_atlas
[2025-12-19 10:25:39] -rw-r--r--. 1 boinc boinc       105 Dec 19 08:11 job.xml
[2025-12-19 10:25:39] -rw-r--r--. 2 boinc boinc 191092194 Dec 19 08:11 EVNT.47886929._000626.pool.root.1
[2025-12-19 10:25:39] -rw-r--r--. 2 boinc boinc     15847 Dec 19 08:11 start_atlas.sh
[2025-12-19 10:25:39] drwxrwx--x. 2 boinc boinc        68 Dec 19 08:11 shared
[2025-12-19 10:25:39] -rw-r--r--. 2 boinc boinc    592399 Dec 19 08:11 input.tar.gz
[2025-12-19 10:25:39] -rw-r--r--. 1 boinc boinc      9312 Dec 19 08:11 init_data.xml
[2025-12-19 10:25:39] -rw-r--r--. 1 boinc boinc         0 Dec 19 08:11 boinc_lockfile
[2025-12-19 10:25:39] -rw-r--r--. 1 boinc boinc      2515 Dec 19 08:12 pandaJob.out
[2025-12-19 10:25:39] -rw-------. 1 boinc boinc    988880 Dec 19 08:14 agis_schedconf.cvmfs.json
[2025-12-19 10:25:39] -rw-------. 1 boinc boinc   1516240 Dec 19 08:14 agis_ddmendpoints.agis.ALL.json
[2025-12-19 10:25:39] drwx------. 5 boinc boinc      4096 Dec 19 08:14 pilot3
[2025-12-19 10:25:39] -rw-r--r--. 1 boinc boinc       529 Dec 19 10:23 boinc_task_state.xml
[2025-12-19 10:25:39] -rw-------. 1 boinc boinc 148095493 Dec 19 10:23 HITS.47886933._015134.pool.root.1
[2025-12-19 10:25:39] -rw-------. 1 boinc boinc      1016 Dec 19 10:24 memory_monitor_summary.json
[2025-12-19 10:25:39] -rw-------. 1 boinc boinc    304860 Dec 19 10:24 log.47886933._015134.job.log.tgz.1
[2025-12-19 10:25:39] -rw-------. 1 boinc boinc        95 Dec 19 10:24 pilot_heartbeat.json
[2025-12-19 10:25:39] -rw-------. 1 boinc boinc      7766 Dec 19 10:24 heartbeat.json
[2025-12-19 10:25:39] -rw-r--r--. 1 boinc boinc      8192 Dec 19 10:25 boinc_mmap_file
[2025-12-19 10:25:39] -rw-r--r--. 1 boinc boinc        27 Dec 19 10:25 wrapper_checkpoint.txt
[2025-12-19 10:25:39] -rw-------. 1 boinc boinc      4739 Dec 19 10:25 pilotlog.txt
[2025-12-19 10:25:39] -rw-------. 1 boinc boinc   1090376 Dec 19 10:25 log.47886933._015134.job.log.1
[2025-12-19 10:25:39] -rw-------. 1 boinc boinc       357 Dec 19 10:25 output.list
[2025-12-19 10:25:39] -rw-r--r--. 1 boinc boinc       620 Dec 19 10:25 runtime_log
[2025-12-19 10:25:39] -rw-------. 1 boinc boinc   1413120 Dec 19 10:25 result.tar.gz
[2025-12-19 10:25:39] -rw-r--r--. 1 boinc boinc      8775 Dec 19 10:25 runtime_log.err
[2025-12-19 10:25:39] -rw-------. 1 boinc boinc       644 Dec 19 10:25 pSoMDmlEOq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmT4YKDmGiUxtm.diag
[2025-12-19 10:25:39] -rw-r--r--. 1 boinc boinc     20970 Dec 19 10:25 stderr.txt
[2025-12-19 10:25:39] HITS file was successfully produced:
[2025-12-19 10:25:39] -rw-------. 1 boinc boinc 148095493 Dec 19 10:23 shared/HITS.pool.root.1
[2025-12-19 10:25:39]  *** Contents of shared directory: ***
[2025-12-19 10:25:39] total 333220
[2025-12-19 10:25:39] -rw-r--r--. 2 boinc boinc 191092194 Dec 19 08:11 ATLAS.root_0
[2025-12-19 10:25:39] -rw-r--r--. 2 boinc boinc     15847 Dec 19 08:11 start_atlas.sh
[2025-12-19 10:25:39] -rw-r--r--. 2 boinc boinc    592399 Dec 19 08:11 input.tar.gz
[2025-12-19 10:25:39] -rw-------. 1 boinc boinc 148095493 Dec 19 10:23 HITS.pool.root.1
[2025-12-19 10:25:39] -rw-------. 1 boinc boinc   1413120 Dec 19 10:25 result.tar.gz
10:25:40 (1372118): run_atlas exited; CPU time 20734.850634
10:25:40 (1372118): called boinc_finish(0)

</stderr_txt>
]]>

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