Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:47:05 (1510377): wrapper (7.7.26015): starting
12:47:05 (1510377): wrapper: running run_atlas (--nthreads 2)
[2025-12-20 12:47:05] Arguments: --nthreads 2
[2025-12-20 12:47:05] Threads: 2
[2025-12-20 12:47:05] Checking for CVMFS
[2025-12-20 12:47:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-20 12:47:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-20 12:47:05] Running cvmfs_config stat atlas.cern.ch
[2025-12-20 12:47:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-20 12:47:05] 2.9.2.0 164634 4148 60316 154224 1 57 15414951 36864000 0 130560 0 2156821 99.987 150398 3707 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-20 12:47:05] CVMFS is ok
[2025-12-20 12:47:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-20 12:47:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-20 12:47:06] Further information can be found at the LHC@home message board.
[2025-12-20 12:47:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-20 12:47:06] Checking for apptainer binary...
[2025-12-20 12:47:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-20 12:47:06] Running /usr/bin/apptainer --version
[2025-12-20 12:47:06] apptainer version 1.4.1-1.1
[2025-12-20 12:47:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-20 12:47:06] atlasA210
[2025-12-20 12:47:06] apptainer works
[2025-12-20 12:47:06] Set ATHENA_PROC_NUMBER=2
[2025-12-20 12:47:06] Set ATHENA_CORE_NUMBER=2
[2025-12-20 12:47:06] Starting ATLAS job with PandaID=6933463727
[2025-12-20 12:47:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-20 15:50:40]  *** The last 200 lines of the pilot log: ***
[2025-12-20 15:50:40] 2025-12-20 14:49:36,389 | INFO     | mean y: 2307950.9553072625
[2025-12-20 15:50:40] 2025-12-20 14:49:36,389 | INFO     | intersect: -4376467155.81415
[2025-12-20 15:50:40] 2025-12-20 14:49:36,389 | INFO     | chi2: 1.576322331836144
[2025-12-20 15:50:40] 2025-12-20 14:49:36,389 | INFO     | sum of square deviations: 1633472487.5
[2025-12-20 15:50:40] 2025-12-20 14:49:36,389 | INFO     | sum of deviations: 4181935946.9999976
[2025-12-20 15:50:40] 2025-12-20 14:49:36,389 | INFO     | mean x: 1766236541.5
[2025-12-20 15:50:40] 2025-12-20 14:49:36,389 | INFO     | mean y: 2307712.172413793
[2025-12-20 15:50:40] 2025-12-20 14:49:36,389 | INFO     | intersect: -4519524238.06042
[2025-12-20 15:50:40] 2025-12-20 14:49:36,389 | INFO     | chi2: 1.5766768948738128
[2025-12-20 15:50:40] 2025-12-20 14:49:36,389 | INFO     | current chi2=1.5766768948738128 (change=-0.022493054276271855 %)
[2025-12-20 15:50:40] 2025-12-20 14:49:36,389 | INFO     | right removable region: 173
[2025-12-20 15:50:40] 2025-12-20 14:49:36,390 | INFO     | sum of square deviations: 1633472487.5
[2025-12-20 15:50:40] 2025-12-20 14:49:36,390 | INFO     | sum of deviations: -16284182440.499987
[2025-12-20 15:50:40] 2025-12-20 14:49:36,390 | INFO     | mean x: 1766236846.5
[2025-12-20 15:50:40] 2025-12-20 14:49:36,390 | INFO     | mean y: 2329339.9022988505
[2025-12-20 15:50:40] 2025-12-20 14:49:36,390 | INFO     | intersect: 17610047413.904675
[2025-12-20 15:50:40] 2025-12-20 14:49:36,390 | INFO     | chi2: 0.19396401582412362
[2025-12-20 15:50:40] 2025-12-20 14:49:36,390 | INFO     | current chi2=0.19396401582412362 (change=87.69515524161933 %)
[2025-12-20 15:50:40] 2025-12-20 14:49:36,390 | INFO     | sum of square deviations: 1496660620.0
[2025-12-20 15:50:40] 2025-12-20 14:49:36,391 | INFO     | sum of deviations: -8357455548.000002
[2025-12-20 15:50:40] 2025-12-20 14:49:36,391 | INFO     | mean x: 1766236999.0
[2025-12-20 15:50:40] 2025-12-20 14:49:36,391 | INFO     | mean y: 2320498.656804734
[2025-12-20 15:50:40] 2025-12-20 14:49:36,391 | INFO     | intersect: 9865109035.429707
[2025-12-20 15:50:40] 2025-12-20 14:49:36,391 | INFO     | chi2: 0.13573890784789722
[2025-12-20 15:50:40] 2025-12-20 14:49:36,391 | INFO     | current chi2=0.13573890784789722 (change=30.018510252449026 %)
[2025-12-20 15:50:40] 2025-12-20 14:49:36,391 | INFO     | sum of square deviations: 1367709365.0
[2025-12-20 15:50:40] 2025-12-20 14:49:36,391 | INFO     | sum of deviations: -5510556.999999415
[2025-12-20 15:50:40] 2025-12-20 14:49:36,391 | INFO     | mean x: 1766237151.5
[2025-12-20 15:50:40] 2025-12-20 14:49:36,391 | INFO     | mean y: 2310616.7073170734
[2025-12-20 15:50:40] 2025-12-20 14:49:36,391 | INFO     | intersect: 9426858.467391118
[2025-12-20 15:50:40] 2025-12-20 14:49:36,391 | INFO     | chi2: 0.04728032274506205
[2025-12-20 15:50:40] 2025-12-20 14:49:36,392 | INFO     | current chi2=0.04728032274506205 (change=65.16818685616492 %)
[2025-12-20 15:50:40] 2025-12-20 14:49:36,392 | INFO     | sum of square deviations: 1246386160.0
[2025-12-20 15:50:40] 2025-12-20 14:49:36,392 | INFO     | sum of deviations: 2992091175.000001
[2025-12-20 15:50:40] 2025-12-20 14:49:36,392 | INFO     | mean x: 1766237304.0
[2025-12-20 15:50:40] 2025-12-20 14:49:36,392 | INFO     | mean y: 2306931.5283018867
[2025-12-20 15:50:40] 2025-12-20 14:49:36,392 | INFO     | intersect: -4237745806.424271
[2025-12-20 15:50:40] 2025-12-20 14:49:36,392 | INFO     | chi2: 0.0021933903108802893
[2025-12-20 15:50:40] 2025-12-20 14:49:36,392 | INFO     | current chi2=0.0021933903108802893 (change=95.36088126405743 %)
[2025-12-20 15:50:40] 2025-12-20 14:49:36,392 | INFO     | sum of square deviations: 1132458442.5
[2025-12-20 15:50:40] 2025-12-20 14:49:36,393 | INFO     | sum of deviations: 2455772922.500001
[2025-12-20 15:50:40] 2025-12-20 14:49:36,393 | INFO     | mean x: 1766237456.5
[2025-12-20 15:50:40] 2025-12-20 14:49:36,393 | INFO     | mean y: 2307648.837662338
[2025-12-20 15:50:40] 2025-12-20 14:49:36,393 | INFO     | intersect: -3827835654.966595
[2025-12-20 15:50:40] 2025-12-20 14:49:36,393 | INFO     | chi2: 0.0020645574047002384
[2025-12-20 15:50:40] 2025-12-20 14:49:36,393 | INFO     | current chi2=0.0020645574047002384 (change=5.873688122947229 %)
[2025-12-20 15:50:40] 2025-12-20 14:49:36,393 | INFO     | left removable region: 50
[2025-12-20 15:50:40] 2025-12-20 14:49:36,393 | INFO     | sum of square deviations: 576985702.0
[2025-12-20 15:50:40] 2025-12-20 14:49:36,393 | INFO     | sum of deviations: 43388690.000000015
[2025-12-20 15:50:40] 2025-12-20 14:49:36,393 | INFO     | mean x: 1766238036.0
[2025-12-20 15:50:40] 2025-12-20 14:49:36,393 | INFO     | mean y: 2311139.4146341463
[2025-12-20 15:50:40] 2025-12-20 14:49:36,393 | INFO     | intersect: -130508017.70585349
[2025-12-20 15:50:40] 2025-12-20 14:49:36,393 | INFO     | chi2: 0.0006833529802887781
[2025-12-20 15:50:40] 2025-12-20 14:49:36,393 | INFO     | current memory leak: 0.08 B/s (using 123 data points, chi2=0.00)
[2025-12-20 15:50:40] 2025-12-20 14:49:36,393 | INFO     | could have reported an average CPU frequency of 4537 MHz (10 samples)
[2025-12-20 15:50:40] 2025-12-20 14:49:36,394 | INFO     | ..............................
[2025-12-20 15:50:40] 2025-12-20 14:49:36,394 | INFO     | . Timing measurements:
[2025-12-20 15:50:40] 2025-12-20 14:49:36,394 | INFO     | . get job = 0 s
[2025-12-20 15:50:40] 2025-12-20 14:49:36,394 | INFO     | . initial setup = 1 s
[2025-12-20 15:50:40] 2025-12-20 14:49:36,394 | INFO     | . payload setup = 6 s
[2025-12-20 15:50:40] 2025-12-20 14:49:36,394 | INFO     | . stage-in = 0 s
[2025-12-20 15:50:40] 2025-12-20 14:49:36,394 | INFO     | . payload execution = 10901 s
[2025-12-20 15:50:40] 2025-12-20 14:49:36,394 | INFO     | . stage-out = 0 s
[2025-12-20 15:50:40] 2025-12-20 14:49:36,394 | INFO     | . log creation = 0 s
[2025-12-20 15:50:40] 2025-12-20 14:49:36,394 | INFO     | ..............................
[2025-12-20 15:50:40] 2025-12-20 14:49:36,422 | INFO     | 
[2025-12-20 15:50:40] 2025-12-20 14:49:36,422 | INFO     | job summary report
[2025-12-20 15:50:40] 2025-12-20 14:49:36,422 | INFO     | --------------------------------------------------
[2025-12-20 15:50:40] 2025-12-20 14:49:36,422 | INFO     | PanDA job id: 6933463727
[2025-12-20 15:50:40] 2025-12-20 14:49:36,422 | INFO     | task id: 47898763
[2025-12-20 15:50:40] 2025-12-20 14:49:36,422 | INFO     | errors: (none)
[2025-12-20 15:50:40] 2025-12-20 14:49:36,422 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-20 15:50:40] 2025-12-20 14:49:36,422 | INFO     | pilot state: finished 
[2025-12-20 15:50:40] 2025-12-20 14:49:36,422 | INFO     | transexitcode: 0
[2025-12-20 15:50:40] 2025-12-20 14:49:36,422 | INFO     | exeerrorcode: 0
[2025-12-20 15:50:40] 2025-12-20 14:49:36,423 | INFO     | exeerrordiag: 
[2025-12-20 15:50:40] 2025-12-20 14:49:36,423 | INFO     | exitcode: 0
[2025-12-20 15:50:40] 2025-12-20 14:49:36,423 | INFO     | exitmsg: OK
[2025-12-20 15:50:40] 2025-12-20 14:49:36,423 | INFO     | cpuconsumptiontime: 21417 s
[2025-12-20 15:50:40] 2025-12-20 14:49:36,423 | INFO     | nevents: 400
[2025-12-20 15:50:40] 2025-12-20 14:49:36,423 | INFO     | neventsw: 0
[2025-12-20 15:50:40] 2025-12-20 14:49:36,423 | INFO     | pid: 1520695
[2025-12-20 15:50:40] 2025-12-20 14:49:36,423 | INFO     | pgrp: 1520695
[2025-12-20 15:50:40] 2025-12-20 14:49:36,423 | INFO     | corecount: 2
[2025-12-20 15:50:40] 2025-12-20 14:49:36,423 | INFO     | event service: False
[2025-12-20 15:50:40] 2025-12-20 14:49:36,423 | INFO     | sizes: {0: 2283911, 7: 2284173, 11: 2284201, 10911: 2313520, 10913: 2322580, 10920: 2322718}
[2025-12-20 15:50:40] 2025-12-20 14:49:36,423 | INFO     | --------------------------------------------------
[2025-12-20 15:50:40] 2025-12-20 14:49:36,423 | INFO     | 
[2025-12-20 15:50:40] 2025-12-20 14:49:36,423 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-20 15:50:40] 2025-12-20 14:49:36,433 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-20 15:50:40] 2025-12-20 14:49:36,433 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-20 15:50:40] 2025-12-20 14:49:36,433 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-20 15:50:40] 2025-12-20 14:49:36,433 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-20 15:50:40] 2025-12-20 14:49:36,433 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-20 15:50:40] 2025-12-20 14:49:36,433 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-20 15:50:40] 2025-12-20 14:49:36,433 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-20 15:50:40] 2025-12-20 14:49:36,433 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-20 15:50:40] 2025-12-20 14:49:36,433 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-20 15:50:40] 2025-12-20 14:49:36,433 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-20 15:50:40] 2025-12-20 14:49:36,433 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-20 15:50:40] 2025-12-20 14:49:36,433 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-20 15:50:40] 2025-12-20 14:49:36,434 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-20 15:50:40] 2025-12-20 14:49:36,434 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-20 15:50:40] 2025-12-20 14:49:36,434 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-20 15:50:40] 2025-12-20 14:49:36,434 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-20 15:50:40] 2025-12-20 14:49:36,434 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-20 15:50:40] 2025-12-20 14:49:36,434 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-20 15:50:40] 2025-12-20 14:49:36,434 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-20 15:50:40] 2025-12-20 14:49:36,434 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-20 15:50:40] 2025-12-20 14:49:36,434 | INFO     | job 6933463727 has completed (purged errors)
[2025-12-20 15:50:40] 2025-12-20 14:49:36,434 | INFO     | overall cleanup function is called
[2025-12-20 15:50:40] 2025-12-20 14:49:37,440 | INFO     | --- collectZombieJob: --- 10, [1520695]
[2025-12-20 15:50:40] 2025-12-20 14:49:37,440 | INFO     | zombie collector waiting for pid 1520695
[2025-12-20 15:50:40] 2025-12-20 14:49:37,440 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-20 15:50:40] 2025-12-20 14:49:37,441 | INFO     | collected zombie processes
[2025-12-20 15:50:40] 2025-12-20 14:49:37,441 | INFO     | will attempt to kill all subprocesses of pid=1520695
[2025-12-20 15:50:40] 2025-12-20 14:49:37,482 | INFO     | process IDs to be killed: [1520695] (in reverse order)
[2025-12-20 15:50:40] 2025-12-20 14:49:37,506 | WARNING  | found no corresponding commands to process id(s)
[2025-12-20 15:50:40] 2025-12-20 14:49:37,506 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-20 15:50:40] 2025-12-20 14:49:37,510 | INFO     | did not find any defunct processes belonging to 1520695
[2025-12-20 15:50:40] 2025-12-20 14:49:37,511 | INFO     | did not find any defunct processes belonging to 1520695
[2025-12-20 15:50:40] 2025-12-20 14:49:37,511 | INFO     | ready for new job
[2025-12-20 15:50:40] 2025-12-20 14:49:37,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-20 15:50:40] 2025-12-20 14:49:37,511 | INFO     | ***************************************
[2025-12-20 15:50:40] 2025-12-20 14:49:37,511 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-20 15:50:40] 2025-12-20 14:49:37,512 | INFO     | ***************************************
[2025-12-20 15:50:40] 2025-12-20 14:49:37,512 | INFO     | 
[2025-12-20 15:50:40] 2025-12-20 14:49:37,512 | INFO     | architecture information:
[2025-12-20 15:50:40] 2025-12-20 14:49:37,512 | INFO     | executing command: cat /etc/os-release
[2025-12-20 15:50:40] 2025-12-20 14:49:37,520 | INFO     | cat /etc/os-release:
[2025-12-20 15:50:40] NAME="CentOS Linux"
[2025-12-20 15:50:40] VERSION="7 (Core)"
[2025-12-20 15:50:40] ID="centos"
[2025-12-20 15:50:40] ID_LIKE="rhel fedora"
[2025-12-20 15:50:40] VERSION_ID="7"
[2025-12-20 15:50:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-20 15:50:40] ANSI_COLOR="0;31"
[2025-12-20 15:50:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-20 15:50:40] HOME_URL="https://www.centos.org/"
[2025-12-20 15:50:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-20 15:50:40] 
[2025-12-20 15:50:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-20 15:50:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-20 15:50:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-20 15:50:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-20 15:50:40] 
[2025-12-20 15:50:40] 2025-12-20 14:49:37,520 | INFO     | ***************************************
[2025-12-20 15:50:40] 2025-12-20 14:49:38,024 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-20 15:50:40] 2025-12-20 14:49:38,036 | INFO     | sufficient remaining disk space (192891846656 B)
[2025-12-20 15:50:40] 2025-12-20 14:49:38,036 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-20 15:50:40] 2025-12-20 14:49:38,036 | INFO     | current server update state: UPDATING_FINAL
[2025-12-20 15:50:40] 2025-12-20 14:49:38,036 | INFO     | update_server=False
[2025-12-20 15:50:40] 2025-12-20 14:49:38,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-20 15:50:40] 2025-12-20 14:49:38,036 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-20 15:50:40] 2025-12-20 14:49:38,274 | INFO     | all payload control threads have been joined
[2025-12-20 15:50:40] 2025-12-20 14:49:38,384 | INFO     | all job control threads have been joined
[2025-12-20 15:50:40] 2025-12-20 14:49:38,453 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-20 15:50:40] 2025-12-20 14:49:38,453 | INFO     | aborting loop
[2025-12-20 15:50:40] 2025-12-20 14:49:38,523 | INFO     | all data control threads have been joined
[2025-12-20 15:50:40] 2025-12-20 14:49:39,041 | INFO     | [job] retrieve thread has finished
[2025-12-20 15:50:40] 2025-12-20 14:49:39,041 | INFO     | [job] queue monitor thread has finished
[2025-12-20 15:50:40] 2025-12-20 14:49:39,055 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-20 15:50:40] 2025-12-20 14:49:39,111 | INFO     | [payload] validate_post thread has finished
[2025-12-20 15:50:40] 2025-12-20 14:49:39,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-20 15:50:40] 2025-12-20 14:49:39,279 | INFO     | [payload] control thread has finished
[2025-12-20 15:50:40] 2025-12-20 14:49:39,389 | INFO     | [job] control thread has finished
[2025-12-20 15:50:40] 2025-12-20 14:49:39,458 | INFO     | [job] job monitor thread has finished
[2025-12-20 15:50:40] 2025-12-20 14:49:39,528 | INFO     | [data] control thread has finished
[2025-12-20 15:50:40] 2025-12-20 14:49:39,633 | INFO     | [payload] failed_post thread has finished
[2025-12-20 15:50:40] 2025-12-20 14:49:39,763 | INFO     | [job] validate thread has finished
[2025-12-20 15:50:40] 2025-12-20 14:49:39,881 | INFO     | [payload] execute_payloads thread has finished
[2025-12-20 15:50:40] 2025-12-20 14:49:39,929 | INFO     | [job] create_data_payload thread has finished
[2025-12-20 15:50:40] 2025-12-20 14:49:39,992 | INFO     | [payload] validate_pre thread has finished
[2025-12-20 15:50:40] 2025-12-20 14:49:40,102 | INFO     | [data] copytool_in thread has finished
[2025-12-20 15:50:40] 2025-12-20 14:49:41,060 | INFO     | [data] copytool_out thread has finished
[2025-12-20 15:50:40] 2025-12-20 14:49:43,204 | INFO     | [data] queue_monitor thread has finished
[2025-12-20 15:50:40] 2025-12-20 14:49:48,404 | INFO     | job.realtimelogging is not enabled
[2025-12-20 15:50:40] 2025-12-20 14:49:49,410 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-20 15:50:40] 2025-12-20 14:50:07,982 | INFO     | PID=1514142 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-20 15:50:40] 2025-12-20 14:50:07,982 | INFO     | found 0 job(s) in 20 queues
[2025-12-20 15:50:40] 2025-12-20 14:50:07,982 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-20 15:50:40] 2025-12-20 14:50:07,982 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-20 15:50:40] 2025-12-20 14:50:35,264 | INFO     | [monitor] cgroup control has ended
[2025-12-20 15:50:40] 2025-12-20 14:50:35,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139891552077632)>', '<ExcThread(monitor, started 139890842924800)>']
[2025-12-20 15:50:40] 2025-12-20 14:50:36,111 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-20 15:50:40] 2025-12-20 14:50:36,111 | INFO     | [monitor] control thread has ended
[2025-12-20 15:50:40] 2025-12-20 14:50:40,422 | INFO     | all workflow threads have been joined
[2025-12-20 15:50:40] 2025-12-20 14:50:40,423 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-20 15:50:40] 2025-12-20 14:50:40,424 | INFO     | traces error code: 0
[2025-12-20 15:50:40] 2025-12-20 14:50:40,424 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-20 15:50:40] 2025-12-20 14:50:40,491 [wrapper] ==== pilot stdout END ====
[2025-12-20 15:50:40] 2025-12-20 14:50:40,494 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-20 15:50:40] 2025-12-20 14:50:40,496 [wrapper] pilotpid: 1514142
[2025-12-20 15:50:40] 2025-12-20 14:50:40,498 [wrapper] Pilot exit status: 0
[2025-12-20 15:50:40] 2025-12-20 14:50:40,504 [wrapper] pandaids: 6933463727
[2025-12-20 15:50:40] 2025-12-20 14:50:40,518 [wrapper] cleanup supervisor_pilot 1594788 1514143
[2025-12-20 15:50:40] 2025-12-20 14:50:40,520 [wrapper] Test setup, not cleaning
[2025-12-20 15:50:40] 2025-12-20 14:50:40,522 [wrapper] apfmon messages muted
[2025-12-20 15:50:40] 2025-12-20 14:50:40,524 [wrapper] ==== wrapper stdout END ====
[2025-12-20 15:50:40] 2025-12-20 14:50:40,526 [wrapper] ==== wrapper stderr END ====
[2025-12-20 15:50:40]  *** Error codes and diagnostics ***
[2025-12-20 15:50:40]     "exeErrorCode": 0,
[2025-12-20 15:50:40]     "exeErrorDiag": "",
[2025-12-20 15:50:40]     "pilotErrorCode": 0,
[2025-12-20 15:50:40]     "pilotErrorDiag": "",
[2025-12-20 15:50:40]  *** Listing of results directory ***
[2025-12-20 15:50:40] total 443576
[2025-12-20 15:50:40] -rw-r--r-- 1 boinc boinc    579449 Dec 18 09:05 pilot3.tar.gz
[2025-12-20 15:50:40] -rwx------ 1 boinc boinc     36322 Dec 18 09:05 runpilot2-wrapper.sh
[2025-12-20 15:50:40] -rw-r--r-- 1 boinc boinc      5112 Dec 18 09:06 queuedata.json
[2025-12-20 15:50:40] -rw-r--r-- 1 boinc boinc       100 Dec 20 12:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-20 15:50:40] -rwxr-xr-x 1 boinc boinc      7986 Dec 20 12:47 run_atlas
[2025-12-20 15:50:40] -rw-r--r-- 1 boinc boinc       105 Dec 20 12:47 job.xml
[2025-12-20 15:50:40] -rw-r--r-- 2 boinc boinc 222956788 Dec 20 12:47 EVNT.47898761._000463.pool.root.1
[2025-12-20 15:50:40] -rw-r--r-- 2 boinc boinc    592404 Dec 20 12:47 input.tar.gz
[2025-12-20 15:50:40] -rw-r--r-- 2 boinc boinc     15847 Dec 20 12:47 start_atlas.sh
[2025-12-20 15:50:40] drwxrwx--x 2 boinc boinc      4096 Dec 20 12:47 shared
[2025-12-20 15:50:40] -rw-r--r-- 1 boinc boinc         0 Dec 20 12:47 boinc_setup_complete
[2025-12-20 15:50:40] -rw-r--r-- 1 boinc boinc      6207 Dec 20 12:47 init_data.xml
[2025-12-20 15:50:40] -rw-r--r-- 1 boinc boinc         0 Dec 20 12:47 boinc_lockfile
[2025-12-20 15:50:40] -rw-r--r-- 1 boinc boinc      2508 Dec 20 12:47 pandaJob.out
[2025-12-20 15:50:40] -rw------- 1 boinc boinc    988146 Dec 20 12:47 agis_schedconf.cvmfs.json
[2025-12-20 15:50:40] drwx------ 5 boinc boinc      4096 Dec 20 12:47 pilot3
[2025-12-20 15:50:40] -rw------- 1 boinc boinc 223556976 Dec 20 15:49 HITS.47898763._023555.pool.root.1
[2025-12-20 15:50:40] -rw------- 1 boinc boinc        95 Dec 20 15:49 pilot_heartbeat.json
[2025-12-20 15:50:40] -rw-r--r-- 1 boinc boinc       530 Dec 20 15:49 boinc_task_state.xml
[2025-12-20 15:50:40] -rw------- 1 boinc boinc      1026 Dec 20 15:49 memory_monitor_summary.json
[2025-12-20 15:50:40] -rw------- 1 boinc boinc   1516240 Dec 20 15:49 agis_ddmendpoints.agis.ALL.json
[2025-12-20 15:50:40] -rw------- 1 boinc boinc    339439 Dec 20 15:49 log.47898763._023555.job.log.tgz.1
[2025-12-20 15:50:40] -rw------- 1 boinc boinc      7767 Dec 20 15:49 heartbeat.json
[2025-12-20 15:50:40] -rw-r--r-- 1 boinc boinc        28 Dec 20 15:50 wrapper_checkpoint.txt
[2025-12-20 15:50:40] -rw-r--r-- 1 boinc boinc      8192 Dec 20 15:50 boinc_mmap_file
[2025-12-20 15:50:40] -rw------- 1 boinc boinc      4824 Dec 20 15:50 pilotlog.txt
[2025-12-20 15:50:40] -rw------- 1 boinc boinc   1558827 Dec 20 15:50 log.47898763._023555.job.log.1
[2025-12-20 15:50:40] -rw------- 1 boinc boinc       357 Dec 20 15:50 output.list
[2025-12-20 15:50:40] -rw-r--r-- 1 boinc boinc       620 Dec 20 15:50 runtime_log
[2025-12-20 15:50:40] -rw------- 1 boinc boinc   1914880 Dec 20 15:50 result.tar.gz
[2025-12-20 15:50:40] -rw------- 1 boinc boinc       665 Dec 20 15:50 rzyKDmHCOq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJidKDmXivS4m.diag
[2025-12-20 15:50:40] -rw-r--r-- 1 boinc boinc      8913 Dec 20 15:50 runtime_log.err
[2025-12-20 15:50:40] -rw-r--r-- 1 boinc boinc     20887 Dec 20 15:50 stderr.txt
[2025-12-20 15:50:40] HITS file was successfully produced:
[2025-12-20 15:50:40] -rw------- 1 boinc boinc 223556976 Dec 20 15:49 shared/HITS.pool.root.1
[2025-12-20 15:50:40]  *** Contents of shared directory: ***
[2025-12-20 15:50:40] total 438528
[2025-12-20 15:50:40] -rw-r--r-- 2 boinc boinc 222956788 Dec 20 12:47 ATLAS.root_0
[2025-12-20 15:50:40] -rw-r--r-- 2 boinc boinc    592404 Dec 20 12:47 input.tar.gz
[2025-12-20 15:50:40] -rw-r--r-- 2 boinc boinc     15847 Dec 20 12:47 start_atlas.sh
[2025-12-20 15:50:40] -rw------- 1 boinc boinc 223556976 Dec 20 15:49 HITS.pool.root.1
[2025-12-20 15:50:40] -rw------- 1 boinc boinc   1914880 Dec 20 15:50 result.tar.gz
15:50:41 (1510377): run_atlas exited; CPU time 21449.950227
15:50:41 (1510377): called boinc_finish(0)

</stderr_txt>
]]>

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