Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:15:49 (30582): wrapper (7.7.26015): starting
02:15:49 (30582): wrapper: running run_atlas (--nthreads 4)
[2025-12-19 02:15:49] Arguments: --nthreads 4
[2025-12-19 02:15:49] Threads: 4
[2025-12-19 02:15:49] Checking for CVMFS
[2025-12-19 02:15:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 02:15:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 02:15:49] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 02:15:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 02:15:50] 2.13.1.0 13397 7685 83436 154171 3 9 9076084 10240001 911 130560 0 10337920 99.951 606058 266 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-19 02:15:50] CVMFS is ok
[2025-12-19 02:15:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 02:15:50] Checking for apptainer binary...
[2025-12-19 02:15:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 02:15:50] Running /usr/bin/apptainer --version
[2025-12-19 02:15:50] apptainer version 1.4.5
[2025-12-19 02:15:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 02:15:50] atlas7l1
[2025-12-19 02:15:50] apptainer works
[2025-12-19 02:15:50] Set ATHENA_PROC_NUMBER=4
[2025-12-19 02:15:50] Set ATHENA_CORE_NUMBER=4
[2025-12-19 02:15:50] Starting ATLAS job with PandaID=6933465109
[2025-12-19 02:15:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 04:21:13]  *** The last 200 lines of the pilot log: ***
[2025-12-19 04:21:13] 2025-12-19 03:20:32,241 | INFO     | monitor loop #568: job 0:6933465109 is in state 'finished'
[2025-12-19 04:21:13] 2025-12-19 03:20:32,241 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 04:21:13] 2025-12-19 03:20:32,254 | INFO     | time since job start (7474s) is within the limit (174528.0s)
[2025-12-19 04:21:13] 2025-12-19 03:20:34,260 | INFO     | time since job start (7476s) is within the limit (174528.0s)
[2025-12-19 04:21:13] 2025-12-19 03:20:34,744 | INFO     | monitor loop #569: job 0:6933465109 is in state 'finished'
[2025-12-19 04:21:13] 2025-12-19 03:20:34,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 04:21:13] 2025-12-19 03:20:35,180 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-19 04:21:13] 2025-12-19 03:20:35,180 | INFO     | found 16 cores (1 core per socket, 16 sockets) , CPU MHz: 2400.0
[2025-12-19 04:21:13] 2025-12-19 03:20:35,182 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6933465109/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 04:21:13] 2025-12-19 03:20:35,182 | INFO     | extracted standard info from prmon json
[2025-12-19 04:21:13] 2025-12-19 03:20:35,182 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 04:21:13] 2025-12-19 03:20:35,182 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 04:21:13] 2025-12-19 03:20:35,182 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 04:21:13] 2025-12-19 03:20:35,183 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 04:21:13] 2025-12-19 03:20:35,184 | INFO     | fitting pss+swap vs Time
[2025-12-19 04:21:13] 2025-12-19 03:20:35,184 | INFO     | sum of square deviations: 576985702.0
[2025-12-19 04:21:13] 2025-12-19 03:20:35,184 | INFO     | sum of deviations: -31679118410.000004
[2025-12-19 04:21:13] 2025-12-19 03:20:35,184 | INFO     | mean x: 1766110699.0
[2025-12-19 04:21:13] 2025-12-19 03:20:35,185 | INFO     | mean y: 2479843.2520325202
[2025-12-19 04:21:13] 2025-12-19 03:20:35,185 | INFO     | intersect: 96969925942.61633
[2025-12-19 04:21:13] 2025-12-19 03:20:35,185 | INFO     | chi2: 2.5503062653348927
[2025-12-19 04:21:13] 2025-12-19 03:20:35,185 | INFO     | sum of square deviations: 509440249.5
[2025-12-19 04:21:13] 2025-12-19 03:20:35,185 | INFO     | sum of deviations: -21697666053.5
[2025-12-19 04:21:13] 2025-12-19 03:20:35,185 | INFO     | mean x: 1766110546.5
[2025-12-19 04:21:13] 2025-12-19 03:20:35,185 | INFO     | mean y: 2501864.059322034
[2025-12-19 04:21:13] 2025-12-19 03:20:35,185 | INFO     | intersect: 75223250301.45067
[2025-12-19 04:21:13] 2025-12-19 03:20:35,185 | INFO     | chi2: 1.9130472415998345
[2025-12-19 04:21:13] 2025-12-19 03:20:35,185 | INFO     | current chi2=1.9130472415998345 (change=24.9875488445062 %)
[2025-12-19 04:21:13] 2025-12-19 03:20:35,186 | INFO     | right removable region: 117
[2025-12-19 04:21:13] 2025-12-19 03:20:35,186 | INFO     | sum of square deviations: 509440249.5
[2025-12-19 04:21:13] 2025-12-19 03:20:35,186 | INFO     | sum of deviations: -50340267324.0
[2025-12-19 04:21:13] 2025-12-19 03:20:35,186 | INFO     | mean x: 1766110851.5
[2025-12-19 04:21:13] 2025-12-19 03:20:35,186 | INFO     | mean y: 2521157.6101694917
[2025-12-19 04:21:13] 2025-12-19 03:20:35,186 | INFO     | intersect: 174520519049.58328
[2025-12-19 04:21:13] 2025-12-19 03:20:35,186 | INFO     | chi2: 0.8861225519786353
[2025-12-19 04:21:13] 2025-12-19 03:20:35,186 | INFO     | current chi2=0.8861225519786353 (change=65.2542691039394 %)
[2025-12-19 04:21:13] 2025-12-19 03:20:35,186 | INFO     | sum of square deviations: 447383272.0
[2025-12-19 04:21:13] 2025-12-19 03:20:35,187 | INFO     | sum of deviations: -46863887450.0
[2025-12-19 04:21:13] 2025-12-19 03:20:35,187 | INFO     | mean x: 1766111004.0
[2025-12-19 04:21:13] 2025-12-19 03:20:35,187 | INFO     | mean y: 2512589.9380530976
[2025-12-19 04:21:13] 2025-12-19 03:20:35,187 | INFO     | intersect: 185004573453.00604
[2025-12-19 04:21:13] 2025-12-19 03:20:35,187 | INFO     | chi2: 0.8765378314547205
[2025-12-19 04:21:13] 2025-12-19 03:20:35,187 | INFO     | current chi2=0.8765378314547205 (change=1.0816472848493626 %)
[2025-12-19 04:21:13] 2025-12-19 03:20:35,187 | INFO     | left removable region: 20
[2025-12-19 04:21:13] 2025-12-19 03:20:35,187 | INFO     | sum of square deviations: 282974608.0
[2025-12-19 04:21:13] 2025-12-19 03:20:35,187 | INFO     | sum of deviations: -29514887332.0
[2025-12-19 04:21:13] 2025-12-19 03:20:35,187 | INFO     | mean x: 1766111126.0
[2025-12-19 04:21:13] 2025-12-19 03:20:35,187 | INFO     | mean y: 2518009.0721649486
[2025-12-19 04:21:13] 2025-12-19 03:20:35,188 | INFO     | intersect: 184211876114.02853
[2025-12-19 04:21:13] 2025-12-19 03:20:35,188 | INFO     | chi2: 0.18674756217647026
[2025-12-19 04:21:13] 2025-12-19 03:20:35,188 | INFO     | current memory leak: -104.30 B/s (using 97 data points, chi2=0.19)
[2025-12-19 04:21:13] 2025-12-19 03:20:35,188 | INFO     | could have reported an average CPU frequency of 2400 MHz (8 samples)
[2025-12-19 04:21:13] 2025-12-19 03:20:35,188 | INFO     | ..............................
[2025-12-19 04:21:13] 2025-12-19 03:20:35,188 | INFO     | . Timing measurements:
[2025-12-19 04:21:13] 2025-12-19 03:20:35,188 | INFO     | . get job = 0 s
[2025-12-19 04:21:13] 2025-12-19 03:20:35,188 | INFO     | . initial setup = 1 s
[2025-12-19 04:21:13] 2025-12-19 03:20:35,188 | INFO     | . payload setup = 3 s
[2025-12-19 04:21:13] 2025-12-19 03:20:35,188 | INFO     | . stage-in = 0 s
[2025-12-19 04:21:13] 2025-12-19 03:20:35,188 | INFO     | . payload execution = 7450 s
[2025-12-19 04:21:13] 2025-12-19 03:20:35,188 | INFO     | . stage-out = 0 s
[2025-12-19 04:21:13] 2025-12-19 03:20:35,188 | INFO     | . log creation = 0 s
[2025-12-19 04:21:13] 2025-12-19 03:20:35,189 | INFO     | ..............................
[2025-12-19 04:21:13] 2025-12-19 03:20:35,532 | INFO     | 
[2025-12-19 04:21:13] 2025-12-19 03:20:35,532 | INFO     | job summary report
[2025-12-19 04:21:13] 2025-12-19 03:20:35,532 | INFO     | --------------------------------------------------
[2025-12-19 04:21:13] 2025-12-19 03:20:35,532 | INFO     | PanDA job id: 6933465109
[2025-12-19 04:21:13] 2025-12-19 03:20:35,532 | INFO     | task id: 47898763
[2025-12-19 04:21:13] 2025-12-19 03:20:35,532 | INFO     | errors: (none)
[2025-12-19 04:21:13] 2025-12-19 03:20:35,532 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 04:21:13] 2025-12-19 03:20:35,533 | INFO     | pilot state: finished 
[2025-12-19 04:21:13] 2025-12-19 03:20:35,533 | INFO     | transexitcode: 0
[2025-12-19 04:21:13] 2025-12-19 03:20:35,533 | INFO     | exeerrorcode: 0
[2025-12-19 04:21:13] 2025-12-19 03:20:35,533 | INFO     | exeerrordiag: 
[2025-12-19 04:21:13] 2025-12-19 03:20:35,533 | INFO     | exitcode: 0
[2025-12-19 04:21:13] 2025-12-19 03:20:35,533 | INFO     | exitmsg: OK
[2025-12-19 04:21:13] 2025-12-19 03:20:35,533 | INFO     | cpuconsumptiontime: 28619 s
[2025-12-19 04:21:13] 2025-12-19 03:20:35,533 | INFO     | nevents: 400
[2025-12-19 04:21:13] 2025-12-19 03:20:35,534 | INFO     | neventsw: 0
[2025-12-19 04:21:13] 2025-12-19 03:20:35,534 | INFO     | pid: 40934
[2025-12-19 04:21:13] 2025-12-19 03:20:35,534 | INFO     | pgrp: 40934
[2025-12-19 04:21:13] 2025-12-19 03:20:35,534 | INFO     | corecount: 4
[2025-12-19 04:21:13] 2025-12-19 03:20:35,534 | INFO     | event service: False
[2025-12-19 04:21:13] 2025-12-19 03:20:35,534 | INFO     | sizes: {0: 2283795, 1: 2283994, 3: 2284256, 11: 2284284, 7458: 2311940, 7459: 2321150, 7463: 2321288}
[2025-12-19 04:21:13] 2025-12-19 03:20:35,534 | INFO     | --------------------------------------------------
[2025-12-19 04:21:13] 2025-12-19 03:20:35,534 | INFO     | 
[2025-12-19 04:21:13] 2025-12-19 03:20:35,534 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2025-12-19 04:21:13] 2025-12-19 03:20:35,550 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 04:21:13] 2025-12-19 03:20:35,551 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 04:21:13] 2025-12-19 03:20:35,551 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 04:21:13] 2025-12-19 03:20:35,551 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 04:21:13] 2025-12-19 03:20:35,551 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 04:21:13] 2025-12-19 03:20:35,552 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 04:21:13] 2025-12-19 03:20:35,552 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 04:21:13] 2025-12-19 03:20:35,552 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 04:21:13] 2025-12-19 03:20:35,552 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 04:21:13] 2025-12-19 03:20:35,552 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 04:21:13] 2025-12-19 03:20:35,552 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 04:21:13] 2025-12-19 03:20:35,552 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 04:21:13] 2025-12-19 03:20:35,553 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 04:21:13] 2025-12-19 03:20:35,553 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 04:21:13] 2025-12-19 03:20:35,553 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 04:21:13] 2025-12-19 03:20:35,553 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 04:21:13] 2025-12-19 03:20:35,553 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 04:21:13] 2025-12-19 03:20:35,553 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 04:21:13] 2025-12-19 03:20:35,553 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 04:21:13] 2025-12-19 03:20:35,554 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 04:21:13] 2025-12-19 03:20:35,554 | INFO     | job 6933465109 has completed (purged errors)
[2025-12-19 04:21:13] 2025-12-19 03:20:35,554 | INFO     | overall cleanup function is called
[2025-12-19 04:21:13] 2025-12-19 03:20:36,562 | INFO     | --- collectZombieJob: --- 10, [40934]
[2025-12-19 04:21:13] 2025-12-19 03:20:36,563 | INFO     | zombie collector waiting for pid 40934
[2025-12-19 04:21:13] 2025-12-19 03:20:36,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 04:21:13] 2025-12-19 03:20:36,563 | INFO     | collected zombie processes
[2025-12-19 04:21:13] 2025-12-19 03:20:36,563 | INFO     | will attempt to kill all subprocesses of pid=40934
[2025-12-19 04:21:13] 2025-12-19 03:20:36,649 | INFO     | process IDs to be killed: [40934] (in reverse order)
[2025-12-19 04:21:13] 2025-12-19 03:20:36,679 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 04:21:13] 2025-12-19 03:20:36,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 04:21:13] 2025-12-19 03:20:36,685 | INFO     | did not find any defunct processes belonging to 40934
[2025-12-19 04:21:13] 2025-12-19 03:20:36,689 | INFO     | did not find any defunct processes belonging to 40934
[2025-12-19 04:21:13] 2025-12-19 03:20:36,689 | INFO     | ready for new job
[2025-12-19 04:21:13] 2025-12-19 03:20:36,689 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 04:21:13] 2025-12-19 03:20:36,690 | INFO     | ***************************************
[2025-12-19 04:21:13] 2025-12-19 03:20:36,690 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 04:21:13] 2025-12-19 03:20:36,690 | INFO     | ***************************************
[2025-12-19 04:21:13] 2025-12-19 03:20:36,690 | INFO     | 
[2025-12-19 04:21:13] 2025-12-19 03:20:36,691 | INFO     | pilot is running in a VM
[2025-12-19 04:21:13] 2025-12-19 03:20:36,691 | INFO     | architecture information:
[2025-12-19 04:21:13] 2025-12-19 03:20:36,691 | INFO     | executing command: cat /etc/os-release
[2025-12-19 04:21:13] 2025-12-19 03:20:36,699 | INFO     | cat /etc/os-release:
[2025-12-19 04:21:13] NAME="CentOS Linux"
[2025-12-19 04:21:13] VERSION="7 (Core)"
[2025-12-19 04:21:13] ID="centos"
[2025-12-19 04:21:13] ID_LIKE="rhel fedora"
[2025-12-19 04:21:13] VERSION_ID="7"
[2025-12-19 04:21:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 04:21:13] ANSI_COLOR="0;31"
[2025-12-19 04:21:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 04:21:13] HOME_URL="https://www.centos.org/"
[2025-12-19 04:21:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 04:21:13] 
[2025-12-19 04:21:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 04:21:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 04:21:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 04:21:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 04:21:13] 
[2025-12-19 04:21:13] 2025-12-19 03:20:36,699 | INFO     | ***************************************
[2025-12-19 04:21:13] 2025-12-19 03:20:37,203 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2025-12-19 04:21:13] 2025-12-19 03:20:37,215 | INFO     | sufficient remaining disk space (150372089856 B)
[2025-12-19 04:21:13] 2025-12-19 03:20:37,216 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 04:21:13] 2025-12-19 03:20:37,216 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 04:21:13] 2025-12-19 03:20:37,216 | INFO     | update_server=False
[2025-12-19 04:21:13] 2025-12-19 03:20:37,216 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 04:21:13] 2025-12-19 03:20:37,216 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 04:21:13] 2025-12-19 03:20:37,216 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 04:21:13] 2025-12-19 03:20:37,216 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 04:21:13] 2025-12-19 03:20:37,246 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-19 04:21:13] 2025-12-19 03:20:37,246 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-19 04:21:13] 2025-12-19 03:20:37,246 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 04:21:13] 2025-12-19 03:20:37,247 | INFO     | will abort loop
[2025-12-19 04:21:13] 2025-12-19 03:20:37,358 | INFO     | all data control threads have been joined
[2025-12-19 04:21:13] 2025-12-19 03:20:37,680 | INFO     | all job control threads have been joined
[2025-12-19 04:21:13] 2025-12-19 03:20:38,085 | INFO     | all payload control threads have been joined
[2025-12-19 04:21:13] 2025-12-19 03:20:38,221 | INFO     | [job] retrieve thread has finished
[2025-12-19 04:21:13] 2025-12-19 03:20:38,222 | INFO     | [job] queue monitor thread has finished
[2025-12-19 04:21:13] 2025-12-19 03:20:38,252 | INFO     | [job] job monitor thread has finished
[2025-12-19 04:21:13] 2025-12-19 03:20:38,364 | INFO     | [data] control thread has finished
[2025-12-19 04:21:13] 2025-12-19 03:20:38,411 | INFO     | [payload] failed_post thread has finished
[2025-12-19 04:21:13] 2025-12-19 03:20:38,588 | INFO     | [data] copytool_in thread has finished
[2025-12-19 04:21:13] 2025-12-19 03:20:38,686 | INFO     | [job] control thread has finished
[2025-12-19 04:21:13] 2025-12-19 03:20:38,693 | INFO     | [payload] validate_post thread has finished
[2025-12-19 04:21:13] 2025-12-19 03:20:38,908 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 04:21:13] 2025-12-19 03:20:39,091 | INFO     | [payload] control thread has finished
[2025-12-19 04:21:13] 2025-12-19 03:20:39,209 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 04:21:13] 2025-12-19 03:20:39,217 | INFO     | [data] copytool_out thread has finished
[2025-12-19 04:21:13] 2025-12-19 03:20:39,310 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 04:21:13] 2025-12-19 03:20:39,388 | INFO     | [job] validate thread has finished
[2025-12-19 04:21:13] 2025-12-19 03:20:39,649 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 04:21:13] 2025-12-19 03:20:41,222 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 04:21:13] 2025-12-19 03:21:07,461 | INFO     | PID=34380 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-19 04:21:13] 2025-12-19 03:21:07,461 | INFO     | .. there are 2 such processes running
[2025-12-19 04:21:13] 2025-12-19 03:21:07,462 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 04:21:13] 2025-12-19 03:21:07,462 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 04:21:13] 2025-12-19 03:21:07,462 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 04:21:13] 2025-12-19 03:21:08,573 | INFO     | [monitor] cgroup control has ended
[2025-12-19 04:21:13] 2025-12-19 03:21:08,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125815066392384)>', '<ExcThread(monitor, started 125814708344576)>']
[2025-12-19 04:21:13] 2025-12-19 03:21:09,471 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 04:21:13] 2025-12-19 03:21:09,471 | INFO     | [monitor] control thread has ended
[2025-12-19 04:21:13] 2025-12-19 03:21:13,663 | INFO     | all workflow threads have been joined
[2025-12-19 04:21:13] 2025-12-19 03:21:13,664 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 04:21:13] 2025-12-19 03:21:13,664 | INFO     | traces error code: 0
[2025-12-19 04:21:13] 2025-12-19 03:21:13,664 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 04:21:13] 2025-12-19 03:21:13,734 [wrapper] ==== pilot stdout END ====
[2025-12-19 04:21:13] 2025-12-19 03:21:13,737 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 04:21:13] 2025-12-19 03:21:13,742 [wrapper] pilotpid: 34380
[2025-12-19 04:21:13] 2025-12-19 03:21:13,745 [wrapper] Pilot exit status: 0
[2025-12-19 04:21:13] 2025-12-19 03:21:13,755 [wrapper] pandaids: 6933465109
[2025-12-19 04:21:13] 2025-12-19 03:21:13,777 [wrapper] cleanup supervisor_pilot   88603 34381
[2025-12-19 04:21:13] 2025-12-19 03:21:13,782 [wrapper] Test setup, not cleaning
[2025-12-19 04:21:13] 2025-12-19 03:21:13,785 [wrapper] apfmon messages muted
[2025-12-19 04:21:13] 2025-12-19 03:21:13,788 [wrapper] ==== wrapper stdout END ====
[2025-12-19 04:21:13] 2025-12-19 03:21:13,790 [wrapper] ==== wrapper stderr END ====
[2025-12-19 04:21:13]  *** Error codes and diagnostics ***
[2025-12-19 04:21:13]     "exeErrorCode": 0,
[2025-12-19 04:21:13]     "exeErrorDiag": "",
[2025-12-19 04:21:13]     "pilotErrorCode": 0,
[2025-12-19 04:21:13]     "pilotErrorDiag": "",
[2025-12-19 04:21:13]  *** Listing of results directory ***
[2025-12-19 04:21:13] insgesamt 441812
[2025-12-19 04:21:13] -rw-r--r-- 1 yeti boinc    579449 Dez 18 09:05 pilot3.tar.gz
[2025-12-19 04:21:13] -rwx------ 1 yeti boinc     36322 Dez 18 09:05 runpilot2-wrapper.sh
[2025-12-19 04:21:13] -rw-r--r-- 1 yeti boinc      5112 Dez 18 09:07 queuedata.json
[2025-12-19 04:21:13] -rw-r--r-- 1 yeti boinc       100 Dez 19 02:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 04:21:13] -rwxr-xr-x 1 yeti boinc      7986 Dez 19 02:15 run_atlas
[2025-12-19 04:21:13] -rw-r--r-- 1 yeti boinc       105 Dez 19 02:15 job.xml
[2025-12-19 04:21:13] -rw-r--r-- 2 yeti boinc    592399 Dez 19 02:15 input.tar.gz
[2025-12-19 04:21:13] -rw-r--r-- 2 yeti boinc 223078078 Dez 19 02:15 EVNT.47898761._000917.pool.root.1
[2025-12-19 04:21:13] -rw-r--r-- 2 yeti boinc     15847 Dez 19 02:15 start_atlas.sh
[2025-12-19 04:21:13] drwxrwx--x 2 yeti boinc      4096 Dez 19 02:15 shared
[2025-12-19 04:21:13] -rw-r--r-- 1 yeti boinc      6616 Dez 19 02:15 init_data.xml
[2025-12-19 04:21:13] -rw-r--r-- 1 yeti boinc         0 Dez 19 02:15 boinc_setup_complete
[2025-12-19 04:21:13] -rw-r--r-- 1 yeti boinc         0 Dez 19 02:15 boinc_lockfile
[2025-12-19 04:21:13] -rw-r--r-- 1 yeti boinc      2505 Dez 19 02:15 pandaJob.out
[2025-12-19 04:21:13] -rw------- 1 yeti boinc        52 Dez 19 02:15 setup.sh.local
[2025-12-19 04:21:13] -rw------- 1 yeti boinc    988880 Dez 19 02:15 agis_schedconf.cvmfs.json
[2025-12-19 04:21:13] -rw------- 1 yeti boinc   1516240 Dez 19 02:15 agis_ddmendpoints.agis.ALL.json
[2025-12-19 04:21:13] drwx------ 5 yeti boinc      4096 Dez 19 02:15 pilot3
[2025-12-19 04:21:13] -rw------- 1 yeti boinc 222627521 Dez 19 04:20 HITS.47898763._023854.pool.root.1
[2025-12-19 04:21:13] -rw-r--r-- 1 yeti boinc       529 Dez 19 04:20 boinc_task_state.xml
[2025-12-19 04:21:13] -rw------- 1 yeti boinc      1025 Dez 19 04:20 memory_monitor_summary.json
[2025-12-19 04:21:13] -rw------- 1 yeti boinc    292198 Dez 19 04:20 log.47898763._023854.job.log.tgz.1
[2025-12-19 04:21:13] -rw------- 1 yeti boinc      7769 Dez 19 04:20 heartbeat.json
[2025-12-19 04:21:13] -rw-r--r-- 1 yeti boinc      8192 Dez 19 04:20 boinc_mmap_file
[2025-12-19 04:21:13] -rw-r--r-- 1 yeti boinc        27 Dez 19 04:20 wrapper_checkpoint.txt
[2025-12-19 04:21:13] -rw------- 1 yeti boinc        95 Dez 19 04:21 pilot_heartbeat.json
[2025-12-19 04:21:13] -rw------- 1 yeti boinc      5084 Dez 19 04:21 pilotlog.txt
[2025-12-19 04:21:13] -rw------- 1 yeti boinc   1105279 Dez 19 04:21 log.47898763._023854.job.log.1
[2025-12-19 04:21:13] -rw------- 1 yeti boinc       357 Dez 19 04:21 output.list
[2025-12-19 04:21:13] -rw-r--r-- 1 yeti boinc       620 Dez 19 04:21 runtime_log
[2025-12-19 04:21:13] -rw------- 1 yeti boinc   1413120 Dez 19 04:21 result.tar.gz
[2025-12-19 04:21:13] -rw-r--r-- 1 yeti boinc      9545 Dez 19 04:21 runtime_log.err
[2025-12-19 04:21:13] -rw------- 1 yeti boinc       639 Dez 19 04:21 qBTMDmRCOq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZjdKDmxOjc0m.diag
[2025-12-19 04:21:13] -rw-r--r-- 1 yeti boinc     20938 Dez 19 04:21 stderr.txt
[2025-12-19 04:21:13] HITS file was successfully produced:
[2025-12-19 04:21:13] -rw------- 1 yeti boinc 222627521 Dez 19 04:20 shared/HITS.pool.root.1
[2025-12-19 04:21:13]  *** Contents of shared directory: ***
[2025-12-19 04:21:13] insgesamt 437248
[2025-12-19 04:21:13] -rw-r--r-- 2 yeti boinc    592399 Dez 19 02:15 input.tar.gz
[2025-12-19 04:21:13] -rw-r--r-- 2 yeti boinc 223078078 Dez 19 02:15 ATLAS.root_0
[2025-12-19 04:21:13] -rw-r--r-- 2 yeti boinc     15847 Dez 19 02:15 start_atlas.sh
[2025-12-19 04:21:13] -rw------- 1 yeti boinc 222627521 Dez 19 04:20 HITS.pool.root.1
[2025-12-19 04:21:13] -rw------- 1 yeti boinc   1413120 Dez 19 04:21 result.tar.gz
04:21:15 (30582): run_atlas exited; CPU time 28709.703433
04:21:15 (30582): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN