Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:16:50 (789374): wrapper (7.7.26015): starting
12:16:50 (789374): wrapper: running run_atlas (--nthreads 4)
[2025-12-19 12:16:50] Arguments: --nthreads 4
[2025-12-19 12:16:50] Threads: 4
[2025-12-19 12:16:50] Checking for CVMFS
[2025-12-19 12:16:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 12:16:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 12:16:50] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 12:16:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 12:16:50] 2.9.2.0 3067 2774 92944 154187 3 9 19087578 36864001 0 130560 0 2030964 99.991 100251 5673 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-19 12:16:50] CVMFS is ok
[2025-12-19 12:16:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-19 12:16:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-19 12:16:50] Further information can be found at the LHC@home message board.
[2025-12-19 12:16:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 12:16:50] Checking for apptainer binary...
[2025-12-19 12:16:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 12:16:50] Running /usr/bin/apptainer --version
[2025-12-19 12:16:50] apptainer version 1.4.1-1.1
[2025-12-19 12:16:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 12:16:50] thA314
[2025-12-19 12:16:50] apptainer works
[2025-12-19 12:16:50] Set ATHENA_PROC_NUMBER=4
[2025-12-19 12:16:50] Set ATHENA_CORE_NUMBER=4
[2025-12-19 12:16:50] Starting ATLAS job with PandaID=6934030859
[2025-12-19 12:16:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 13:58:13]  *** The last 200 lines of the pilot log: ***
[2025-12-19 13:58:13]  is_tar=False
[2025-12-19 13:58:13]  lfn=log.47905857._001165.job.log.tgz.1
[2025-12-19 13:58:13]  mtime=0
[2025-12-19 13:58:13]  protocol_id=None
[2025-12-19 13:58:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-19 13:58:13]  replicas=None
[2025-12-19 13:58:13]  scope=mc23_13p6TeV
[2025-12-19 13:58:13]  status=None
[2025-12-19 13:58:13]  status_code=0
[2025-12-19 13:58:13]  storage_token=
[2025-12-19 13:58:13]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6934030859/log.47905857._001165.job.log.tgz.1
[2025-12-19 13:58:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/58/log.47905857._001165.job.log.tgz.1
[2025-12-19 13:58:13]  workdir=None
[2025-12-19 13:58:13] ]
[2025-12-19 13:58:13] 2025-12-19 12:57:14,427 | INFO     | transferring file log.47905857._001165.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6934030859/log.47905857._001165.job.log.tgz.1 to /local/data/boinc/
[2025-12-19 13:58:13] 2025-12-19 12:57:14,427 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6934030859/log.47905857._001165.job.log.tgz.1 /local/data/boinc/slots/0/log.47905857._0011
[2025-12-19 13:58:13] 2025-12-19 12:57:14,445 | INFO     | PID=793176 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-19 13:58:13] 2025-12-19 12:57:14,447 | INFO     | adding to output.list: log.47905857._001165.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/58/log.47905857._001165.job.log.tg
[2025-12-19 13:58:13] 2025-12-19 12:57:14,448 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-19 13:58:13] 2025-12-19 12:57:14,448 | INFO     | summary of transferred files:
[2025-12-19 13:58:13] 2025-12-19 12:57:14,448 | INFO     |  -- lfn=log.47905857._001165.job.log.tgz.1, status_code=0, status=transferred
[2025-12-19 13:58:13] 2025-12-19 12:57:14,448 | INFO     | stage-out finished correctly
[2025-12-19 13:58:13] 2025-12-19 12:57:15,446 | INFO     | time since job start (6017s) is within the limit (174528.0s)
[2025-12-19 13:58:13] 2025-12-19 12:57:15,748 | INFO     | monitor loop #462: job 0:6934030859 is in state 'finished'
[2025-12-19 13:58:13] 2025-12-19 12:57:15,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 13:58:13] 2025-12-19 12:57:16,941 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-19 13:58:13] 2025-12-19 12:57:17,051 | INFO     | job 6934030859 has state=finished
[2025-12-19 13:58:13] 2025-12-19 12:57:17,051 | INFO     | preparing for final server update for job 6934030859 in state='finished'
[2025-12-19 13:58:13] 2025-12-19 12:57:17,051 | INFO     | this job has now completed (state=finished)
[2025-12-19 13:58:13] 2025-12-19 12:57:17,052 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-19 13:58:13] 2025-12-19 12:57:17,052 | INFO     | log transfer has been attempted: DONE
[2025-12-19 13:58:13] 2025-12-19 12:57:17,052 | INFO     | job 6934030859 has finished - writing final server update
[2025-12-19 13:58:13] 2025-12-19 12:57:17,052 | INFO     | total number of processed events: 400 (read)
[2025-12-19 13:58:13] 2025-12-19 12:57:17,053 | INFO     | executing command: lscpu
[2025-12-19 13:58:13] 2025-12-19 12:57:17,074 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-19 13:58:13] 2025-12-19 12:57:17,452 | INFO     | time since job start (6019s) is within the limit (174528.0s)
[2025-12-19 13:58:13] 2025-12-19 12:57:18,252 | INFO     | monitor loop #463: job 0:6934030859 is in state 'finished'
[2025-12-19 13:58:13] 2025-12-19 12:57:18,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 13:58:13] 2025-12-19 12:57:19,458 | INFO     | time since job start (6021s) is within the limit (174528.0s)
[2025-12-19 13:58:13] 2025-12-19 12:57:20,492 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-19 13:58:13] 2025-12-19 12:57:20,494 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3267.474
[2025-12-19 13:58:13] 2025-12-19 12:57:20,495 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6934030859/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 13:58:13] 2025-12-19 12:57:20,495 | INFO     | extracted standard info from prmon json
[2025-12-19 13:58:13] 2025-12-19 12:57:20,495 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 13:58:13] 2025-12-19 12:57:20,495 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 13:58:13] 2025-12-19 12:57:20,495 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 13:58:13] 2025-12-19 12:57:20,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 13:58:13] 2025-12-19 12:57:20,496 | INFO     | fitting pss+swap vs Time
[2025-12-19 13:58:13] 2025-12-19 12:57:20,497 | INFO     | sum of square deviations: 241429643.0
[2025-12-19 13:58:13] 2025-12-19 12:57:20,497 | INFO     | sum of deviations: -9948880247.5
[2025-12-19 13:58:13] 2025-12-19 12:57:20,497 | INFO     | mean x: 1766146122.5
[2025-12-19 13:58:13] 2025-12-19 12:57:20,497 | INFO     | mean y: 2613968.554347826
[2025-12-19 13:58:13] 2025-12-19 12:57:20,497 | INFO     | intersect: 72782311001.61075
[2025-12-19 13:58:13] 2025-12-19 12:57:20,497 | INFO     | chi2: 0.06118936314054582
[2025-12-19 13:58:13] 2025-12-19 12:57:20,497 | INFO     | current memory leak: -41.21 B/s (using 92 data points, chi2=0.06)
[2025-12-19 13:58:13] 2025-12-19 12:57:20,497 | INFO     | could have reported an average CPU frequency of 3674 MHz (7 samples)
[2025-12-19 13:58:13] 2025-12-19 12:57:20,497 | INFO     | ..............................
[2025-12-19 13:58:13] 2025-12-19 12:57:20,497 | INFO     | . Timing measurements:
[2025-12-19 13:58:13] 2025-12-19 12:57:20,497 | INFO     | . get job = 0 s
[2025-12-19 13:58:13] 2025-12-19 12:57:20,497 | INFO     | . initial setup = 1 s
[2025-12-19 13:58:13] 2025-12-19 12:57:20,497 | INFO     | . payload setup = 4 s
[2025-12-19 13:58:13] 2025-12-19 12:57:20,497 | INFO     | . stage-in = 0 s
[2025-12-19 13:58:13] 2025-12-19 12:57:20,497 | INFO     | . payload execution = 5991 s
[2025-12-19 13:58:13] 2025-12-19 12:57:20,497 | INFO     | . stage-out = 0 s
[2025-12-19 13:58:13] 2025-12-19 12:57:20,497 | INFO     | . log creation = 0 s
[2025-12-19 13:58:13] 2025-12-19 12:57:20,497 | INFO     | ..............................
[2025-12-19 13:58:13] 2025-12-19 12:57:20,537 | INFO     | 
[2025-12-19 13:58:13] 2025-12-19 12:57:20,537 | INFO     | job summary report
[2025-12-19 13:58:13] 2025-12-19 12:57:20,537 | INFO     | --------------------------------------------------
[2025-12-19 13:58:13] 2025-12-19 12:57:20,537 | INFO     | PanDA job id: 6934030859
[2025-12-19 13:58:13] 2025-12-19 12:57:20,537 | INFO     | task id: 47905857
[2025-12-19 13:58:13] 2025-12-19 12:57:20,537 | INFO     | errors: (none)
[2025-12-19 13:58:13] 2025-12-19 12:57:20,537 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 13:58:13] 2025-12-19 12:57:20,538 | INFO     | pilot state: finished 
[2025-12-19 13:58:13] 2025-12-19 12:57:20,538 | INFO     | transexitcode: 0
[2025-12-19 13:58:13] 2025-12-19 12:57:20,538 | INFO     | exeerrorcode: 0
[2025-12-19 13:58:13] 2025-12-19 12:57:20,538 | INFO     | exeerrordiag: 
[2025-12-19 13:58:13] 2025-12-19 12:57:20,538 | INFO     | exitcode: 0
[2025-12-19 13:58:13] 2025-12-19 12:57:20,538 | INFO     | exitmsg: OK
[2025-12-19 13:58:13] 2025-12-19 12:57:20,538 | INFO     | cpuconsumptiontime: 22998 s
[2025-12-19 13:58:13] 2025-12-19 12:57:20,538 | INFO     | nevents: 400
[2025-12-19 13:58:13] 2025-12-19 12:57:20,538 | INFO     | neventsw: 0
[2025-12-19 13:58:13] 2025-12-19 12:57:20,538 | INFO     | pid: 799756
[2025-12-19 13:58:13] 2025-12-19 12:57:20,538 | INFO     | pgrp: 799756
[2025-12-19 13:58:13] 2025-12-19 12:57:20,538 | INFO     | corecount: 4
[2025-12-19 13:58:13] 2025-12-19 12:57:20,538 | INFO     | event service: False
[2025-12-19 13:58:13] 2025-12-19 12:57:20,538 | INFO     | sizes: {0: 2283915, 1: 2283915, 4: 2284205, 11: 2284233, 5999: 2311087, 6001: 2320091, 6003: 2320275, 6007: 2320469}
[2025-12-19 13:58:13] 2025-12-19 12:57:20,538 | INFO     | --------------------------------------------------
[2025-12-19 13:58:13] 2025-12-19 12:57:20,538 | INFO     | 
[2025-12-19 13:58:13] 2025-12-19 12:57:20,538 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-19 13:58:13] 2025-12-19 12:57:20,556 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 13:58:13] 2025-12-19 12:57:20,556 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 13:58:13] 2025-12-19 12:57:20,556 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 13:58:13] 2025-12-19 12:57:20,556 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 13:58:13] 2025-12-19 12:57:20,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 13:58:13] 2025-12-19 12:57:20,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 13:58:13] 2025-12-19 12:57:20,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 13:58:13] 2025-12-19 12:57:20,556 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 13:58:13] 2025-12-19 12:57:20,556 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 13:58:13] 2025-12-19 12:57:20,556 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 13:58:13] 2025-12-19 12:57:20,556 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 13:58:13] 2025-12-19 12:57:20,556 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 13:58:13] 2025-12-19 12:57:20,556 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 13:58:13] 2025-12-19 12:57:20,556 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 13:58:13] 2025-12-19 12:57:20,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 13:58:13] 2025-12-19 12:57:20,557 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 13:58:13] 2025-12-19 12:57:20,557 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 13:58:13] 2025-12-19 12:57:20,557 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 13:58:13] 2025-12-19 12:57:20,557 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 13:58:13] 2025-12-19 12:57:20,557 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 13:58:13] 2025-12-19 12:57:20,557 | INFO     | job 6934030859 has completed (purged errors)
[2025-12-19 13:58:13] 2025-12-19 12:57:20,557 | INFO     | overall cleanup function is called
[2025-12-19 13:58:13] 2025-12-19 12:57:21,558 | INFO     | --- collectZombieJob: --- 10, [799756]
[2025-12-19 13:58:13] 2025-12-19 12:57:21,559 | INFO     | zombie collector waiting for pid 799756
[2025-12-19 13:58:13] 2025-12-19 12:57:21,559 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 13:58:13] 2025-12-19 12:57:21,559 | INFO     | collected zombie processes
[2025-12-19 13:58:13] 2025-12-19 12:57:21,559 | INFO     | will attempt to kill all subprocesses of pid=799756
[2025-12-19 13:58:13] 2025-12-19 12:57:21,604 | INFO     | process IDs to be killed: [799756] (in reverse order)
[2025-12-19 13:58:13] 2025-12-19 12:57:21,637 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 13:58:13] 2025-12-19 12:57:21,637 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 13:58:13] 2025-12-19 12:57:21,639 | INFO     | did not find any defunct processes belonging to 799756
[2025-12-19 13:58:13] 2025-12-19 12:57:21,640 | INFO     | did not find any defunct processes belonging to 799756
[2025-12-19 13:58:13] 2025-12-19 12:57:21,640 | INFO     | ready for new job
[2025-12-19 13:58:13] 2025-12-19 12:57:21,640 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 13:58:13] 2025-12-19 12:57:21,641 | INFO     | ***************************************
[2025-12-19 13:58:13] 2025-12-19 12:57:21,641 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 13:58:13] 2025-12-19 12:57:21,641 | INFO     | ***************************************
[2025-12-19 13:58:13] 2025-12-19 12:57:21,641 | INFO     | 
[2025-12-19 13:58:13] 2025-12-19 12:57:21,642 | INFO     | architecture information:
[2025-12-19 13:58:13] 2025-12-19 12:57:21,642 | INFO     | executing command: cat /etc/os-release
[2025-12-19 13:58:13] 2025-12-19 12:57:21,656 | INFO     | cat /etc/os-release:
[2025-12-19 13:58:13] NAME="CentOS Linux"
[2025-12-19 13:58:13] VERSION="7 (Core)"
[2025-12-19 13:58:13] ID="centos"
[2025-12-19 13:58:13] ID_LIKE="rhel fedora"
[2025-12-19 13:58:13] VERSION_ID="7"
[2025-12-19 13:58:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 13:58:13] ANSI_COLOR="0;31"
[2025-12-19 13:58:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 13:58:13] HOME_URL="https://www.centos.org/"
[2025-12-19 13:58:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 13:58:13] 
[2025-12-19 13:58:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 13:58:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 13:58:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 13:58:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 13:58:13] 
[2025-12-19 13:58:13] 2025-12-19 12:57:21,656 | INFO     | ***************************************
[2025-12-19 13:58:13] 2025-12-19 12:57:22,160 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-19 13:58:13] 2025-12-19 12:57:22,178 | INFO     | sufficient remaining disk space (240473079808 B)
[2025-12-19 13:58:13] 2025-12-19 12:57:22,178 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 13:58:13] 2025-12-19 12:57:22,178 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 13:58:13] 2025-12-19 12:57:22,178 | INFO     | update_server=False
[2025-12-19 13:58:13] 2025-12-19 12:57:22,178 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 13:58:13] 2025-12-19 12:57:22,178 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 13:58:13] 2025-12-19 12:57:22,178 | INFO     | aborting loop
[2025-12-19 13:58:13] 2025-12-19 12:57:22,178 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 13:58:13] 2025-12-19 12:57:22,330 | INFO     | all data control threads have been joined
[2025-12-19 13:58:13] 2025-12-19 12:57:22,495 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 13:58:13] 2025-12-19 12:57:22,984 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 13:58:13] 2025-12-19 12:57:23,184 | INFO     | [job] job monitor thread has finished
[2025-12-19 13:58:13] 2025-12-19 12:57:23,184 | INFO     | [job] retrieve thread has finished
[2025-12-19 13:58:13] 2025-12-19 12:57:23,184 | INFO     | [job] queue monitor thread has finished
[2025-12-19 13:58:13] 2025-12-19 12:57:23,190 | INFO     | all payload control threads have been joined
[2025-12-19 13:58:13] 2025-12-19 12:57:23,216 | INFO     | [payload] validate_post thread has finished
[2025-12-19 13:58:13] 2025-12-19 12:57:23,336 | INFO     | [data] control thread has finished
[2025-12-19 13:58:13] 2025-12-19 12:57:23,494 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 13:58:13] 2025-12-19 12:57:23,496 | INFO     | [data] copytool_in thread has finished
[2025-12-19 13:58:13] 2025-12-19 12:57:23,841 | INFO     | all job control threads have been joined
[2025-12-19 13:58:13] 2025-12-19 12:57:24,022 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 13:58:13] 2025-12-19 12:57:24,196 | INFO     | [payload] control thread has finished
[2025-12-19 13:58:13] 2025-12-19 12:57:24,222 | INFO     | [job] validate thread has finished
[2025-12-19 13:58:13] 2025-12-19 12:57:24,273 | INFO     | [payload] failed_post thread has finished
[2025-12-19 13:58:13] 2025-12-19 12:57:24,329 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 13:58:13] 2025-12-19 12:57:24,418 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 13:58:13] 2025-12-19 12:57:24,502 | INFO     | [data] copytool_out thread has finished
[2025-12-19 13:58:13] 2025-12-19 12:57:24,847 | INFO     | [job] control thread has finished
[2025-12-19 13:58:13] 2025-12-19 12:57:26,991 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 13:58:13] 2025-12-19 12:57:52,592 | INFO     | PID=793176 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-19 13:58:13] 2025-12-19 12:57:52,592 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 13:58:13] 2025-12-19 12:57:52,592 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 13:58:13] 2025-12-19 12:57:52,593 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 13:58:13] 2025-12-19 12:58:06,515 | INFO     | [monitor] cgroup control has ended
[2025-12-19 13:58:13] 2025-12-19 12:58:07,793 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140616108767040)>', '<ExcThread(monitor, started 140614796564224)>']
[2025-12-19 13:58:13] 2025-12-19 12:58:08,678 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 13:58:13] 2025-12-19 12:58:08,678 | INFO     | [monitor] control thread has ended
[2025-12-19 13:58:13] 2025-12-19 12:58:12,819 | INFO     | all workflow threads have been joined
[2025-12-19 13:58:13] 2025-12-19 12:58:12,820 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 13:58:13] 2025-12-19 12:58:12,820 | INFO     | traces error code: 0
[2025-12-19 13:58:13] 2025-12-19 12:58:12,820 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 13:58:13] 2025-12-19 12:58:12,901 [wrapper] ==== pilot stdout END ====
[2025-12-19 13:58:13] 2025-12-19 12:58:12,905 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 13:58:13] 2025-12-19 12:58:12,909 [wrapper] pilotpid: 793176
[2025-12-19 13:58:13] 2025-12-19 12:58:12,913 [wrapper] Pilot exit status: 0
[2025-12-19 13:58:13] 2025-12-19 12:58:12,925 [wrapper] pandaids: 6934030859
[2025-12-19 13:58:13] 2025-12-19 12:58:12,948 [wrapper] cleanup supervisor_pilot  811999 793177
[2025-12-19 13:58:13] 2025-12-19 12:58:12,952 [wrapper] Test setup, not cleaning
[2025-12-19 13:58:13] 2025-12-19 12:58:12,956 [wrapper] apfmon messages muted
[2025-12-19 13:58:13] 2025-12-19 12:58:12,960 [wrapper] ==== wrapper stdout END ====
[2025-12-19 13:58:13] 2025-12-19 12:58:12,964 [wrapper] ==== wrapper stderr END ====
[2025-12-19 13:58:13]  *** Error codes and diagnostics ***
[2025-12-19 13:58:13]     "exeErrorCode": 0,
[2025-12-19 13:58:13]     "exeErrorDiag": "",
[2025-12-19 13:58:13]     "pilotErrorCode": 0,
[2025-12-19 13:58:13]     "pilotErrorDiag": "",
[2025-12-19 13:58:13]  *** Listing of results directory ***
[2025-12-19 13:58:13] total 393920
[2025-12-19 13:58:13] -rw-r--r-- 1 boinc boinc    579449 Dec 18 14:26 pilot3.tar.gz
[2025-12-19 13:58:13] -rwx------ 1 boinc boinc     36322 Dec 18 14:30 runpilot2-wrapper.sh
[2025-12-19 13:58:13] -rw-r--r-- 1 boinc boinc      5112 Dec 18 14:32 queuedata.json
[2025-12-19 13:58:13] -rw-r--r-- 1 boinc boinc       100 Dec 19 12:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 13:58:13] -rwxr-xr-x 1 boinc boinc      7986 Dec 19 12:16 run_atlas
[2025-12-19 13:58:13] -rw-r--r-- 1 boinc boinc       105 Dec 19 12:16 job.xml
[2025-12-19 13:58:13] -rw-r--r-- 2 boinc boinc 199341710 Dec 19 12:16 EVNT.47905855._000047.pool.root.1
[2025-12-19 13:58:13] -rw-r--r-- 2 boinc boinc    592382 Dec 19 12:16 input.tar.gz
[2025-12-19 13:58:13] -rw-r--r-- 2 boinc boinc     15847 Dec 19 12:16 start_atlas.sh
[2025-12-19 13:58:13] drwxrwx--x 2 boinc boinc      4096 Dec 19 12:16 shared
[2025-12-19 13:58:13] -rw-r--r-- 1 boinc boinc         0 Dec 19 12:16 boinc_setup_complete
[2025-12-19 13:58:13] -rw-r--r-- 1 boinc boinc      6377 Dec 19 12:16 init_data.xml
[2025-12-19 13:58:13] -rw-r--r-- 1 boinc boinc         0 Dec 19 12:16 boinc_lockfile
[2025-12-19 13:58:13] -rw-r--r-- 1 boinc boinc      2477 Dec 19 12:16 pandaJob.out
[2025-12-19 13:58:13] -rw------- 1 boinc boinc    988895 Dec 19 12:16 agis_schedconf.cvmfs.json
[2025-12-19 13:58:13] -rw------- 1 boinc boinc   1516240 Dec 19 12:16 agis_ddmendpoints.agis.ALL.json
[2025-12-19 13:58:13] drwx------ 5 boinc boinc      4096 Dec 19 12:16 pilot3
[2025-12-19 13:58:13] -rw------- 1 boinc boinc 197796665 Dec 19 13:56 HITS.47905857._001165.pool.root.1
[2025-12-19 13:58:13] -rw-r--r-- 1 boinc boinc       530 Dec 19 13:56 boinc_task_state.xml
[2025-12-19 13:58:13] -rw------- 1 boinc boinc      1022 Dec 19 13:57 memory_monitor_summary.json
[2025-12-19 13:58:13] -rw------- 1 boinc boinc    288972 Dec 19 13:57 log.47905857._001165.job.log.tgz.1
[2025-12-19 13:58:13] -rw------- 1 boinc boinc      7753 Dec 19 13:57 heartbeat.json
[2025-12-19 13:58:13] -rw------- 1 boinc boinc        95 Dec 19 13:57 pilot_heartbeat.json
[2025-12-19 13:58:13] -rw-r--r-- 1 boinc boinc        27 Dec 19 13:58 wrapper_checkpoint.txt
[2025-12-19 13:58:13] -rw-r--r-- 1 boinc boinc      8192 Dec 19 13:58 boinc_mmap_file
[2025-12-19 13:58:13] -rw------- 1 boinc boinc      4751 Dec 19 13:58 pilotlog.txt
[2025-12-19 13:58:13] -rw------- 1 boinc boinc    872334 Dec 19 13:58 log.47905857._001165.job.log.1
[2025-12-19 13:58:13] -rw------- 1 boinc boinc       357 Dec 19 13:58 output.list
[2025-12-19 13:58:13] -rw-r--r-- 1 boinc boinc       620 Dec 19 13:58 runtime_log
[2025-12-19 13:58:13] -rw------- 1 boinc boinc   1177600 Dec 19 13:58 result.tar.gz
[2025-12-19 13:58:13] -rw-r--r-- 1 boinc boinc      8897 Dec 19 13:58 runtime_log.err
[2025-12-19 13:58:13] -rw------- 1 boinc boinc       659 Dec 19 13:58 OZXMDm5FTq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmTZKDmRjkyCo.diag
[2025-12-19 13:58:13] -rw-r--r-- 1 boinc boinc     21699 Dec 19 13:58 stderr.txt
[2025-12-19 13:58:13] HITS file was successfully produced:
[2025-12-19 13:58:13] -rw------- 1 boinc boinc 197796665 Dec 19 13:56 shared/HITS.pool.root.1
[2025-12-19 13:58:13]  *** Contents of shared directory: ***
[2025-12-19 13:58:13] total 389592
[2025-12-19 13:58:13] -rw-r--r-- 2 boinc boinc 199341710 Dec 19 12:16 ATLAS.root_0
[2025-12-19 13:58:13] -rw-r--r-- 2 boinc boinc    592382 Dec 19 12:16 input.tar.gz
[2025-12-19 13:58:13] -rw-r--r-- 2 boinc boinc     15847 Dec 19 12:16 start_atlas.sh
[2025-12-19 13:58:13] -rw------- 1 boinc boinc 197796665 Dec 19 13:56 HITS.pool.root.1
[2025-12-19 13:58:13] -rw------- 1 boinc boinc   1177600 Dec 19 13:58 result.tar.gz
13:58:14 (789374): run_atlas exited; CPU time 23017.933122
13:58:14 (789374): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN