Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:33:39 (2084): wrapper (7.7.26015): starting
01:33:39 (2084): wrapper: running run_atlas (--nthreads 4)
[2025-12-19 01:33:39] Arguments: --nthreads 4
[2025-12-19 01:33:39] Threads: 4
[2025-12-19 01:33:39] Checking for CVMFS
[2025-12-19 01:33:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 01:33:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 01:33:39] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 01:33:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 01:33:40] 2.13.1.0 13397 7643 83236 154170 1 57 9072158 10240000 911 130560 0 10266681 99.951 604715 266 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-19 01:33:40] CVMFS is ok
[2025-12-19 01:33:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 01:33:40] Checking for apptainer binary...
[2025-12-19 01:33:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 01:33:40] Running /usr/bin/apptainer --version
[2025-12-19 01:33:40] apptainer version 1.4.5
[2025-12-19 01:33:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 01:33:40] atlas7l1
[2025-12-19 01:33:40] apptainer works
[2025-12-19 01:33:40] Set ATHENA_PROC_NUMBER=4
[2025-12-19 01:33:40] Set ATHENA_CORE_NUMBER=4
[2025-12-19 01:33:40] Starting ATLAS job with PandaID=6934030882
[2025-12-19 01:33:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 03:46:04]  *** The last 200 lines of the pilot log: ***
[2025-12-19 03:46:04] 2025-12-19 02:45:17,369 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6934030882/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 03:46:04] 2025-12-19 02:45:17,449 | INFO     | number of running child processes to parent process 12902: 1
[2025-12-19 03:46:04] 2025-12-19 02:45:17,450 | INFO     | maximum number of monitored processes: 6
[2025-12-19 03:46:04] 2025-12-19 02:45:19,336 | INFO     | time since job start (7893s) is within the limit (174528.0s)
[2025-12-19 03:46:04] 2025-12-19 02:45:19,953 | INFO     | monitor loop #600: job 0:6934030882 is in state 'finished'
[2025-12-19 03:46:04] 2025-12-19 02:45:19,954 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 03:46:04] 2025-12-19 02:45:20,466 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-19 03:46:04] 2025-12-19 02:45:20,466 | INFO     | found 16 cores (1 core per socket, 16 sockets) , CPU MHz: 2400.0
[2025-12-19 03:46:04] 2025-12-19 02:45:20,468 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6934030882/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 03:46:04] 2025-12-19 02:45:20,468 | INFO     | extracted standard info from prmon json
[2025-12-19 03:46:04] 2025-12-19 02:45:20,468 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 03:46:04] 2025-12-19 02:45:20,468 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 03:46:04] 2025-12-19 02:45:20,468 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 03:46:04] 2025-12-19 02:45:20,468 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 03:46:04] 2025-12-19 02:45:20,470 | INFO     | fitting pss+swap vs Time
[2025-12-19 03:46:04] 2025-12-19 02:45:20,470 | INFO     | sum of square deviations: 665612480.0
[2025-12-19 03:46:04] 2025-12-19 02:45:20,470 | INFO     | sum of deviations: -19616853360.000004
[2025-12-19 03:46:04] 2025-12-19 02:45:20,470 | INFO     | mean x: 1766108350.0
[2025-12-19 03:46:04] 2025-12-19 02:45:20,470 | INFO     | mean y: 2416396.0542635657
[2025-12-19 03:46:04] 2025-12-19 02:45:20,471 | INFO     | intersect: 52052955652.502045
[2025-12-19 03:46:04] 2025-12-19 02:45:20,471 | INFO     | chi2: 1.8847061175067221
[2025-12-19 03:46:04] 2025-12-19 02:45:20,471 | INFO     | sum of square deviations: 591173875.0
[2025-12-19 03:46:04] 2025-12-19 02:45:20,471 | INFO     | sum of deviations: -18245299592.000008
[2025-12-19 03:46:04] 2025-12-19 02:45:20,471 | INFO     | mean x: 1766108197.5
[2025-12-19 03:46:04] 2025-12-19 02:45:20,471 | INFO     | mean y: 2419208.870967742
[2025-12-19 03:46:04] 2025-12-19 02:45:20,471 | INFO     | intersect: 54509518622.346596
[2025-12-19 03:46:04] 2025-12-19 02:45:20,471 | INFO     | chi2: 1.878258937211018
[2025-12-19 03:46:04] 2025-12-19 02:45:20,471 | INFO     | current chi2=1.878258937211018 (change=0.3420788119599776 %)
[2025-12-19 03:46:04] 2025-12-19 02:45:20,471 | INFO     | right removable region: 123
[2025-12-19 03:46:04] 2025-12-19 02:45:20,472 | INFO     | sum of square deviations: 591173875.0
[2025-12-19 03:46:04] 2025-12-19 02:45:20,472 | INFO     | sum of deviations: -37825443548.5
[2025-12-19 03:46:04] 2025-12-19 02:45:20,472 | INFO     | mean x: 1766108502.5
[2025-12-19 03:46:04] 2025-12-19 02:45:20,472 | INFO     | mean y: 2452951.10483871
[2025-12-19 03:46:04] 2025-12-19 02:45:20,472 | INFO     | intersect: 113004465196.38483
[2025-12-19 03:46:04] 2025-12-19 02:45:20,472 | INFO     | chi2: 0.2852346646939408
[2025-12-19 03:46:04] 2025-12-19 02:45:20,472 | INFO     | current chi2=0.2852346646939408 (change=84.86582804372293 %)
[2025-12-19 03:46:04] 2025-12-19 02:45:20,472 | INFO     | sum of square deviations: 522502820.0
[2025-12-19 03:46:04] 2025-12-19 02:45:20,473 | INFO     | sum of deviations: -33506193094.0
[2025-12-19 03:46:04] 2025-12-19 02:45:20,473 | INFO     | mean x: 1766108655.0
[2025-12-19 03:46:04] 2025-12-19 02:45:20,473 | INFO     | mean y: 2443303.5966386553
[2025-12-19 03:46:04] 2025-12-19 02:45:20,473 | INFO     | intersect: 113256526065.1301
[2025-12-19 03:46:04] 2025-12-19 02:45:20,473 | INFO     | chi2: 0.2821442260007005
[2025-12-19 03:46:04] 2025-12-19 02:45:20,473 | INFO     | current chi2=0.2821442260007005 (change=1.0834723390147525 %)
[2025-12-19 03:46:04] 2025-12-19 02:45:20,473 | INFO     | left removable region: 20
[2025-12-19 03:46:04] 2025-12-19 02:45:20,473 | INFO     | sum of square deviations: 338804492.0
[2025-12-19 03:46:04] 2025-12-19 02:45:20,473 | INFO     | sum of deviations: -21346823120.000004
[2025-12-19 03:46:04] 2025-12-19 02:45:20,473 | INFO     | mean x: 1766108777.0
[2025-12-19 03:46:04] 2025-12-19 02:45:20,474 | INFO     | mean y: 2420136.834951456
[2025-12-19 03:46:04] 2025-12-19 02:45:20,474 | INFO     | intersect: 111278429054.97682
[2025-12-19 03:46:04] 2025-12-19 02:45:20,474 | INFO     | chi2: 0.2520511548076603
[2025-12-19 03:46:04] 2025-12-19 02:45:20,474 | INFO     | current memory leak: -63.01 B/s (using 103 data points, chi2=0.25)
[2025-12-19 03:46:04] 2025-12-19 02:45:20,474 | INFO     | could have reported an average CPU frequency of 2400 MHz (8 samples)
[2025-12-19 03:46:04] 2025-12-19 02:45:20,474 | INFO     | ..............................
[2025-12-19 03:46:04] 2025-12-19 02:45:20,474 | INFO     | . Timing measurements:
[2025-12-19 03:46:04] 2025-12-19 02:45:20,474 | INFO     | . get job = 0 s
[2025-12-19 03:46:04] 2025-12-19 02:45:20,474 | INFO     | . initial setup = 1 s
[2025-12-19 03:46:04] 2025-12-19 02:45:20,474 | INFO     | . payload setup = 3 s
[2025-12-19 03:46:04] 2025-12-19 02:45:20,474 | INFO     | . stage-in = 0 s
[2025-12-19 03:46:04] 2025-12-19 02:45:20,474 | INFO     | . payload execution = 7867 s
[2025-12-19 03:46:04] 2025-12-19 02:45:20,474 | INFO     | . stage-out = 0 s
[2025-12-19 03:46:04] 2025-12-19 02:45:20,474 | INFO     | . log creation = 0 s
[2025-12-19 03:46:04] 2025-12-19 02:45:20,474 | INFO     | ..............................
[2025-12-19 03:46:04] 2025-12-19 02:45:20,521 | INFO     | 
[2025-12-19 03:46:04] 2025-12-19 02:45:20,521 | INFO     | job summary report
[2025-12-19 03:46:04] 2025-12-19 02:45:20,521 | INFO     | --------------------------------------------------
[2025-12-19 03:46:04] 2025-12-19 02:45:20,521 | INFO     | PanDA job id: 6934030882
[2025-12-19 03:46:04] 2025-12-19 02:45:20,521 | INFO     | task id: 47905857
[2025-12-19 03:46:04] 2025-12-19 02:45:20,521 | INFO     | errors: (none)
[2025-12-19 03:46:04] 2025-12-19 02:45:20,521 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 03:46:04] 2025-12-19 02:45:20,521 | INFO     | pilot state: finished 
[2025-12-19 03:46:04] 2025-12-19 02:45:20,521 | INFO     | transexitcode: 0
[2025-12-19 03:46:04] 2025-12-19 02:45:20,521 | INFO     | exeerrorcode: 0
[2025-12-19 03:46:04] 2025-12-19 02:45:20,521 | INFO     | exeerrordiag: 
[2025-12-19 03:46:04] 2025-12-19 02:45:20,521 | INFO     | exitcode: 0
[2025-12-19 03:46:04] 2025-12-19 02:45:20,521 | INFO     | exitmsg: OK
[2025-12-19 03:46:04] 2025-12-19 02:45:20,521 | INFO     | cpuconsumptiontime: 30210 s
[2025-12-19 03:46:04] 2025-12-19 02:45:20,521 | INFO     | nevents: 400
[2025-12-19 03:46:04] 2025-12-19 02:45:20,521 | INFO     | neventsw: 0
[2025-12-19 03:46:04] 2025-12-19 02:45:20,522 | INFO     | pid: 12902
[2025-12-19 03:46:04] 2025-12-19 02:45:20,522 | INFO     | pgrp: 12902
[2025-12-19 03:46:04] 2025-12-19 02:45:20,522 | INFO     | corecount: 4
[2025-12-19 03:46:04] 2025-12-19 02:45:20,522 | INFO     | event service: False
[2025-12-19 03:46:04] 2025-12-19 02:45:20,522 | INFO     | sizes: {0: 2283926, 2: 2284188, 11: 2284216, 7874: 2311956, 7875: 2321038, 7881: 2321176}
[2025-12-19 03:46:04] 2025-12-19 02:45:20,522 | INFO     | --------------------------------------------------
[2025-12-19 03:46:04] 2025-12-19 02:45:20,522 | INFO     | 
[2025-12-19 03:46:04] 2025-12-19 02:45:20,522 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2025-12-19 03:46:04] 2025-12-19 02:45:20,538 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 03:46:04] 2025-12-19 02:45:20,538 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 03:46:04] 2025-12-19 02:45:20,538 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 03:46:04] 2025-12-19 02:45:20,538 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 03:46:04] 2025-12-19 02:45:20,538 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 03:46:04] 2025-12-19 02:45:20,538 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 03:46:04] 2025-12-19 02:45:20,538 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 03:46:04] 2025-12-19 02:45:20,539 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 03:46:04] 2025-12-19 02:45:20,539 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 03:46:04] 2025-12-19 02:45:20,539 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 03:46:04] 2025-12-19 02:45:20,539 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 03:46:04] 2025-12-19 02:45:20,539 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 03:46:04] 2025-12-19 02:45:20,539 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 03:46:04] 2025-12-19 02:45:20,539 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 03:46:04] 2025-12-19 02:45:20,539 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 03:46:04] 2025-12-19 02:45:20,539 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 03:46:04] 2025-12-19 02:45:20,539 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 03:46:04] 2025-12-19 02:45:20,539 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 03:46:04] 2025-12-19 02:45:20,539 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 03:46:04] 2025-12-19 02:45:20,539 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 03:46:04] 2025-12-19 02:45:20,539 | INFO     | job 6934030882 has completed (purged errors)
[2025-12-19 03:46:04] 2025-12-19 02:45:20,539 | INFO     | overall cleanup function is called
[2025-12-19 03:46:04] 2025-12-19 02:45:21,542 | INFO     | --- collectZombieJob: --- 10, [12902]
[2025-12-19 03:46:04] 2025-12-19 02:45:21,543 | INFO     | zombie collector waiting for pid 12902
[2025-12-19 03:46:04] 2025-12-19 02:45:21,543 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 03:46:04] 2025-12-19 02:45:21,543 | INFO     | collected zombie processes
[2025-12-19 03:46:04] 2025-12-19 02:45:21,543 | INFO     | will attempt to kill all subprocesses of pid=12902
[2025-12-19 03:46:04] 2025-12-19 02:45:21,630 | INFO     | process IDs to be killed: [12902] (in reverse order)
[2025-12-19 03:46:04] 2025-12-19 02:45:21,657 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 03:46:04] 2025-12-19 02:45:21,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 03:46:04] 2025-12-19 02:45:21,660 | INFO     | did not find any defunct processes belonging to 12902
[2025-12-19 03:46:04] 2025-12-19 02:45:21,662 | INFO     | did not find any defunct processes belonging to 12902
[2025-12-19 03:46:04] 2025-12-19 02:45:21,662 | INFO     | ready for new job
[2025-12-19 03:46:04] 2025-12-19 02:45:21,662 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 03:46:04] 2025-12-19 02:45:21,663 | INFO     | ***************************************
[2025-12-19 03:46:04] 2025-12-19 02:45:21,663 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 03:46:04] 2025-12-19 02:45:21,663 | INFO     | ***************************************
[2025-12-19 03:46:04] 2025-12-19 02:45:21,663 | INFO     | 
[2025-12-19 03:46:04] 2025-12-19 02:45:21,664 | INFO     | pilot is running in a VM
[2025-12-19 03:46:04] 2025-12-19 02:45:21,664 | INFO     | architecture information:
[2025-12-19 03:46:04] 2025-12-19 02:45:21,664 | INFO     | executing command: cat /etc/os-release
[2025-12-19 03:46:04] 2025-12-19 02:45:21,672 | INFO     | cat /etc/os-release:
[2025-12-19 03:46:04] NAME="CentOS Linux"
[2025-12-19 03:46:04] VERSION="7 (Core)"
[2025-12-19 03:46:04] ID="centos"
[2025-12-19 03:46:04] ID_LIKE="rhel fedora"
[2025-12-19 03:46:04] VERSION_ID="7"
[2025-12-19 03:46:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 03:46:04] ANSI_COLOR="0;31"
[2025-12-19 03:46:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 03:46:04] HOME_URL="https://www.centos.org/"
[2025-12-19 03:46:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 03:46:04] 
[2025-12-19 03:46:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 03:46:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 03:46:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 03:46:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 03:46:04] 
[2025-12-19 03:46:04] 2025-12-19 02:45:21,672 | INFO     | ***************************************
[2025-12-19 03:46:04] 2025-12-19 02:45:22,175 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2025-12-19 03:46:04] 2025-12-19 02:45:22,186 | INFO     | sufficient remaining disk space (150495821824 B)
[2025-12-19 03:46:04] 2025-12-19 02:45:22,186 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 03:46:04] 2025-12-19 02:45:22,186 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 03:46:04] 2025-12-19 02:45:22,186 | INFO     | update_server=False
[2025-12-19 03:46:04] 2025-12-19 02:45:22,186 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 03:46:04] 2025-12-19 02:45:22,186 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 03:46:04] 2025-12-19 02:45:22,371 | INFO     | all job control threads have been joined
[2025-12-19 03:46:04] 2025-12-19 02:45:22,457 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-19 03:46:04] 2025-12-19 02:45:22,457 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-19 03:46:04] 2025-12-19 02:45:22,457 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 03:46:04] 2025-12-19 02:45:22,457 | INFO     | will abort loop
[2025-12-19 03:46:04] 2025-12-19 02:45:22,925 | INFO     | all data control threads have been joined
[2025-12-19 03:46:04] 2025-12-19 02:45:23,029 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 03:46:04] 2025-12-19 02:45:23,189 | INFO     | [job] retrieve thread has finished
[2025-12-19 03:46:04] 2025-12-19 02:45:23,190 | INFO     | [job] queue monitor thread has finished
[2025-12-19 03:46:04] 2025-12-19 02:45:23,233 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 03:46:04] 2025-12-19 02:45:23,233 | INFO     | [data] copytool_in thread has finished
[2025-12-19 03:46:04] 2025-12-19 02:45:23,326 | INFO     | [payload] validate_post thread has finished
[2025-12-19 03:46:04] 2025-12-19 02:45:23,376 | INFO     | [job] control thread has finished
[2025-12-19 03:46:04] 2025-12-19 02:45:23,427 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 03:46:04] 2025-12-19 02:45:23,463 | INFO     | [job] job monitor thread has finished
[2025-12-19 03:46:04] 2025-12-19 02:45:23,556 | INFO     | all payload control threads have been joined
[2025-12-19 03:46:04] 2025-12-19 02:45:23,930 | INFO     | [data] control thread has finished
[2025-12-19 03:46:04] 2025-12-19 02:45:24,011 | INFO     | [payload] failed_post thread has finished
[2025-12-19 03:46:04] 2025-12-19 02:45:24,279 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 03:46:04] 2025-12-19 02:45:24,465 | INFO     | [job] validate thread has finished
[2025-12-19 03:46:04] 2025-12-19 02:45:24,562 | INFO     | [payload] control thread has finished
[2025-12-19 03:46:04] 2025-12-19 02:45:24,669 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 03:46:04] 2025-12-19 02:45:25,034 | INFO     | [data] copytool_out thread has finished
[2025-12-19 03:46:04] 2025-12-19 02:45:25,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 03:46:04] 2025-12-19 02:45:29,572 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 03:46:04] 2025-12-19 02:45:52,538 | INFO     | PID=6333 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-19 03:46:04] 2025-12-19 02:45:52,538 | INFO     | .. there are 2 such processes running
[2025-12-19 03:46:04] 2025-12-19 02:45:52,538 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 03:46:04] 2025-12-19 02:45:52,538 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 03:46:04] 2025-12-19 02:45:52,538 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 03:46:04] 2025-12-19 02:45:58,073 | INFO     | [monitor] cgroup control has ended
[2025-12-19 03:46:04] 2025-12-19 02:45:59,446 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134098436331328)>', '<ExcThread(monitor, started 134097653454592)>']
[2025-12-19 03:46:04] 2025-12-19 02:45:59,574 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 03:46:04] 2025-12-19 02:45:59,575 | INFO     | [monitor] control thread has ended
[2025-12-19 03:46:04] 2025-12-19 02:46:04,472 | INFO     | all workflow threads have been joined
[2025-12-19 03:46:04] 2025-12-19 02:46:04,472 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 03:46:04] 2025-12-19 02:46:04,473 | INFO     | traces error code: 0
[2025-12-19 03:46:04] 2025-12-19 02:46:04,473 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 03:46:04] 2025-12-19 02:46:04,543 [wrapper] ==== pilot stdout END ====
[2025-12-19 03:46:04] 2025-12-19 02:46:04,548 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 03:46:04] 2025-12-19 02:46:04,553 [wrapper] pilotpid: 6333
[2025-12-19 03:46:04] 2025-12-19 02:46:04,557 [wrapper] Pilot exit status: 0
[2025-12-19 03:46:04] 2025-12-19 02:46:04,575 [wrapper] pandaids: 6934030882
[2025-12-19 03:46:04] 2025-12-19 02:46:04,606 [wrapper] cleanup supervisor_pilot   62086 6334
[2025-12-19 03:46:04] 2025-12-19 02:46:04,611 [wrapper] Test setup, not cleaning
[2025-12-19 03:46:04] 2025-12-19 02:46:04,615 [wrapper] apfmon messages muted
[2025-12-19 03:46:04] 2025-12-19 02:46:04,620 [wrapper] ==== wrapper stdout END ====
[2025-12-19 03:46:04] 2025-12-19 02:46:04,624 [wrapper] ==== wrapper stderr END ====
[2025-12-19 03:46:04]  *** Error codes and diagnostics ***
[2025-12-19 03:46:04]     "exeErrorCode": 0,
[2025-12-19 03:46:04]     "exeErrorDiag": "",
[2025-12-19 03:46:04]     "pilotErrorCode": 0,
[2025-12-19 03:46:04]     "pilotErrorDiag": "",
[2025-12-19 03:46:04]  *** Listing of results directory ***
[2025-12-19 03:46:04] insgesamt 400216
[2025-12-19 03:46:04] -rw-r--r-- 1 yeti boinc    579449 Dez 18 14:26 pilot3.tar.gz
[2025-12-19 03:46:04] -rwx------ 1 yeti boinc     36322 Dez 18 14:27 runpilot2-wrapper.sh
[2025-12-19 03:46:04] -rw-r--r-- 1 yeti boinc      5112 Dez 18 14:29 queuedata.json
[2025-12-19 03:46:04] -rw-r--r-- 1 yeti boinc       100 Dez 19 01:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 03:46:04] -rwxr-xr-x 1 yeti boinc      7986 Dez 19 01:33 run_atlas
[2025-12-19 03:46:04] -rw-r--r-- 1 yeti boinc       105 Dez 19 01:33 job.xml
[2025-12-19 03:46:04] -rw-r--r-- 2 yeti boinc     15847 Dez 19 01:33 start_atlas.sh
[2025-12-19 03:46:04] drwxrwx--x 2 yeti boinc      4096 Dez 19 01:33 shared
[2025-12-19 03:46:04] -rw-r--r-- 2 yeti boinc    592381 Dez 19 01:33 input.tar.gz
[2025-12-19 03:46:04] -rw-r--r-- 1 yeti boinc      6616 Dez 19 01:33 init_data.xml
[2025-12-19 03:46:04] -rw-r--r-- 2 yeti boinc 197838222 Dez 19 01:33 EVNT.47905855._000048.pool.root.1
[2025-12-19 03:46:04] -rw-r--r-- 1 yeti boinc         0 Dez 19 01:33 boinc_setup_complete
[2025-12-19 03:46:04] -rw-r--r-- 1 yeti boinc         0 Dez 19 01:33 boinc_lockfile
[2025-12-19 03:46:04] -rw-r--r-- 1 yeti boinc      2477 Dez 19 01:33 pandaJob.out
[2025-12-19 03:46:04] -rw------- 1 yeti boinc        52 Dez 19 01:33 setup.sh.local
[2025-12-19 03:46:04] -rw------- 1 yeti boinc    988880 Dez 19 01:33 agis_schedconf.cvmfs.json
[2025-12-19 03:46:04] -rw------- 1 yeti boinc   1516240 Dez 19 01:33 agis_ddmendpoints.agis.ALL.json
[2025-12-19 03:46:04] drwx------ 5 yeti boinc      4096 Dez 19 01:33 pilot3
[2025-12-19 03:46:04] -rw------- 1 yeti boinc 205114734 Dez 19 03:44 HITS.47905857._001188.pool.root.1
[2025-12-19 03:46:04] -rw-r--r-- 1 yeti boinc       530 Dez 19 03:45 boinc_task_state.xml
[2025-12-19 03:46:04] -rw------- 1 yeti boinc      1036 Dez 19 03:45 memory_monitor_summary.json
[2025-12-19 03:46:04] -rw------- 1 yeti boinc    312406 Dez 19 03:45 log.47905857._001188.job.log.tgz.1
[2025-12-19 03:46:04] -rw------- 1 yeti boinc      7770 Dez 19 03:45 heartbeat.json
[2025-12-19 03:46:04] -rw-r--r-- 1 yeti boinc        27 Dez 19 03:45 wrapper_checkpoint.txt
[2025-12-19 03:46:04] -rw-r--r-- 1 yeti boinc      8192 Dez 19 03:45 boinc_mmap_file
[2025-12-19 03:46:04] -rw------- 1 yeti boinc        95 Dez 19 03:45 pilot_heartbeat.json
[2025-12-19 03:46:04] -rw------- 1 yeti boinc      5083 Dez 19 03:46 pilotlog.txt
[2025-12-19 03:46:04] -rw------- 1 yeti boinc   1162641 Dez 19 03:46 log.47905857._001188.job.log.1
[2025-12-19 03:46:04] -rw------- 1 yeti boinc       357 Dez 19 03:46 output.list
[2025-12-19 03:46:04] -rw-r--r-- 1 yeti boinc       620 Dez 19 03:46 runtime_log
[2025-12-19 03:46:04] -rw------- 1 yeti boinc   1495040 Dez 19 03:46 result.tar.gz
[2025-12-19 03:46:04] -rw-r--r-- 1 yeti boinc      9545 Dez 19 03:46 runtime_log.err
[2025-12-19 03:46:04] -rw------- 1 yeti boinc       639 Dez 19 03:46 6cxNDmpDTq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm48dKDmEIlxVn.diag
[2025-12-19 03:46:04] -rw-r--r-- 1 yeti boinc     20950 Dez 19 03:46 stderr.txt
[2025-12-19 03:46:04] HITS file was successfully produced:
[2025-12-19 03:46:04] -rw------- 1 yeti boinc 205114734 Dez 19 03:44 shared/HITS.pool.root.1
[2025-12-19 03:46:04]  *** Contents of shared directory: ***
[2025-12-19 03:46:04] insgesamt 395576
[2025-12-19 03:46:04] -rw-r--r-- 2 yeti boinc     15847 Dez 19 01:33 start_atlas.sh
[2025-12-19 03:46:04] -rw-r--r-- 2 yeti boinc    592381 Dez 19 01:33 input.tar.gz
[2025-12-19 03:46:04] -rw-r--r-- 2 yeti boinc 197838222 Dez 19 01:33 ATLAS.root_0
[2025-12-19 03:46:04] -rw------- 1 yeti boinc 205114734 Dez 19 03:44 HITS.pool.root.1
[2025-12-19 03:46:04] -rw------- 1 yeti boinc   1495040 Dez 19 03:46 result.tar.gz
03:46:06 (2084): run_atlas exited; CPU time 30303.393122
03:46:06 (2084): called boinc_finish(0)

</stderr_txt>
]]>

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