Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
01:22:55 (156780): wrapper (7.7.26015): starting
01:22:55 (156780): wrapper: running run_atlas (--nthreads 4)
[2025-12-19 01:22:55] Arguments: --nthreads 4
[2025-12-19 01:22:55] Threads: 4
[2025-12-19 01:22:55] Checking for CVMFS
[2025-12-19 01:22:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 01:22:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 01:22:55] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 01:22:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 01:22:55] 2.13.1.0 189701 7249 102388 154170 2 57 8008273 10240001 1822 130560 0 20954333 99.997 268928 250 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-19 01:22:55] CVMFS is ok
[2025-12-19 01:22:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 01:22:55] Checking for apptainer binary...
[2025-12-19 01:22:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 01:22:55] Running /usr/bin/apptainer --version
[2025-12-19 01:22:55] apptainer version 1.4.2
[2025-12-19 01:22:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 01:22:55] julianvlneu
[2025-12-19 01:22:55] apptainer works
[2025-12-19 01:22:55] Set ATHENA_PROC_NUMBER=4
[2025-12-19 01:22:55] Set ATHENA_CORE_NUMBER=4
[2025-12-19 01:22:55] Starting ATLAS job with PandaID=6930228640
[2025-12-19 01:22:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 02:35:34]  *** The last 200 lines of the pilot log: ***
[2025-12-19 02:35:34]  status=None
[2025-12-19 02:35:34]  status_code=0
[2025-12-19 02:35:34]  storage_token=
[2025-12-19 02:35:34]  surl=/var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6930228640/log.47905907._000652.job.log.tgz.1
[2025-12-19 02:35:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/42/log.47905907._000652.job.log.tgz.1
[2025-12-19 02:35:34]  workdir=None
[2025-12-19 02:35:34] ]
[2025-12-19 02:35:34] 2025-12-19 01:34:53,884 | INFO     | transferring file log.47905907._000652.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6930228640/log.47905907._000652.job.log.tgz.1 to /var/li
[2025-12-19 02:35:34] 2025-12-19 01:34:53,884 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6930228640/log.47905907._000652.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-12-19 02:35:34] 2025-12-19 01:34:53,904 | INFO     | adding to output.list: log.47905907._000652.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/42/log.47905907._000652.job.log.tg
[2025-12-19 02:35:34] 2025-12-19 01:34:53,906 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-19 02:35:34] 2025-12-19 01:34:53,906 | INFO     | summary of transferred files:
[2025-12-19 02:35:34] 2025-12-19 01:34:53,906 | INFO     |  -- lfn=log.47905907._000652.job.log.tgz.1, status_code=0, status=transferred
[2025-12-19 02:35:34] 2025-12-19 01:34:53,906 | INFO     | stage-out finished correctly
[2025-12-19 02:35:34] 2025-12-19 01:34:55,246 | INFO     | time since job start (4307s) is within the limit (174528.0s)
[2025-12-19 02:35:34] 2025-12-19 01:34:56,095 | INFO     | monitor loop #329: job 0:6930228640 is in state 'finished'
[2025-12-19 02:35:34] 2025-12-19 01:34:56,095 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 02:35:34] 2025-12-19 01:34:57,108 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-19 02:35:34] 2025-12-19 01:34:57,253 | INFO     | time since job start (4309s) is within the limit (174528.0s)
[2025-12-19 02:35:34] 2025-12-19 01:34:57,928 | INFO     | job 6930228640 has state=finished
[2025-12-19 02:35:34] 2025-12-19 01:34:57,929 | INFO     | preparing for final server update for job 6930228640 in state='finished'
[2025-12-19 02:35:34] 2025-12-19 01:34:57,929 | INFO     | this job has now completed (state=finished)
[2025-12-19 02:35:34] 2025-12-19 01:34:57,929 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-19 02:35:34] 2025-12-19 01:34:57,929 | INFO     | log transfer has been attempted: DONE
[2025-12-19 02:35:34] 2025-12-19 01:34:57,929 | INFO     | job 6930228640 has finished - writing final server update
[2025-12-19 02:35:34] 2025-12-19 01:34:57,930 | INFO     | total number of processed events: 400 (read)
[2025-12-19 02:35:34] 2025-12-19 01:34:57,930 | INFO     | executing command: lscpu
[2025-12-19 02:35:34] 2025-12-19 01:34:57,954 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-19 02:35:34] 2025-12-19 01:34:58,394 | INFO     | PID=160615 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-19 02:35:34] 2025-12-19 01:34:58,394 | INFO     | .. there are 3 such processes running
[2025-12-19 02:35:34] 2025-12-19 01:34:58,599 | INFO     | monitor loop #330: job 0:6930228640 is in state 'finished'
[2025-12-19 02:35:34] 2025-12-19 01:34:58,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 02:35:34] 2025-12-19 01:34:59,395 | INFO     | time since job start (4311s) is within the limit (174528.0s)
[2025-12-19 02:35:34] 2025-12-19 01:35:01,103 | INFO     | monitor loop #331: job 0:6930228640 is in state 'finished'
[2025-12-19 02:35:34] 2025-12-19 01:35:01,103 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 02:35:34] 2025-12-19 01:35:01,401 | INFO     | time since job start (4313s) is within the limit (174528.0s)
[2025-12-19 02:35:34] 2025-12-19 01:35:02,967 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-19 02:35:34] 2025-12-19 01:35:02,968 | INFO     | found 24 cores (12 cores per socket, 2 sockets) , CPU MHz: 4399.884000000001
[2025-12-19 02:35:34] 2025-12-19 01:35:02,969 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6930228640/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 02:35:34] 2025-12-19 01:35:02,969 | INFO     | extracted standard info from prmon json
[2025-12-19 02:35:34] 2025-12-19 01:35:02,970 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 02:35:34] 2025-12-19 01:35:02,970 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 02:35:34] 2025-12-19 01:35:02,970 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 02:35:34] 2025-12-19 01:35:02,970 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 02:35:34] 2025-12-19 01:35:02,970 | INFO     | fitting pss+swap vs Time
[2025-12-19 02:35:34] 2025-12-19 01:35:02,971 | INFO     | sum of square deviations: 81266640.0
[2025-12-19 02:35:34] 2025-12-19 01:35:02,971 | INFO     | sum of deviations: -8732613447.5
[2025-12-19 02:35:34] 2025-12-19 01:35:02,971 | INFO     | mean x: 1766106044.5
[2025-12-19 02:35:34] 2025-12-19 01:35:02,971 | INFO     | mean y: 2489397.703125
[2025-12-19 02:35:34] 2025-12-19 01:35:02,971 | INFO     | intersect: 189781732072.3324
[2025-12-19 02:35:34] 2025-12-19 01:35:02,971 | INFO     | chi2: 0.039444204705393934
[2025-12-19 02:35:34] 2025-12-19 01:35:02,971 | INFO     | current memory leak: -107.46 B/s (using 64 data points, chi2=0.04)
[2025-12-19 02:35:34] 2025-12-19 01:35:02,971 | INFO     | could have reported an average CPU frequency of 4399 MHz (6 samples)
[2025-12-19 02:35:34] 2025-12-19 01:35:02,971 | INFO     | ..............................
[2025-12-19 02:35:34] 2025-12-19 01:35:02,971 | INFO     | . Timing measurements:
[2025-12-19 02:35:34] 2025-12-19 01:35:02,971 | INFO     | . get job = 0 s
[2025-12-19 02:35:34] 2025-12-19 01:35:02,971 | INFO     | . initial setup = 1 s
[2025-12-19 02:35:34] 2025-12-19 01:35:02,971 | INFO     | . payload setup = 7 s
[2025-12-19 02:35:34] 2025-12-19 01:35:02,971 | INFO     | . stage-in = 0 s
[2025-12-19 02:35:34] 2025-12-19 01:35:02,971 | INFO     | . payload execution = 4277 s
[2025-12-19 02:35:34] 2025-12-19 01:35:02,971 | INFO     | . stage-out = 0 s
[2025-12-19 02:35:34] 2025-12-19 01:35:02,971 | INFO     | . log creation = 0 s
[2025-12-19 02:35:34] 2025-12-19 01:35:02,971 | INFO     | ..............................
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | 
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | job summary report
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | --------------------------------------------------
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | PanDA job id: 6930228640
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | task id: 47905907
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | errors: (none)
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | pilot state: finished 
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | transexitcode: 0
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | exeerrorcode: 0
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | exeerrordiag: 
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | exitcode: 0
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | exitmsg: OK
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | cpuconsumptiontime: 16198 s
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | nevents: 400
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | neventsw: 0
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | pid: 167249
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | pgrp: 167249
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | corecount: 4
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | event service: False
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | sizes: {0: 2283920, 5: 2284182, 10: 2284238, 4288: 2310247, 4289: 2319273, 4292: 2319329, 4298: 2319651}
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | --------------------------------------------------
[2025-12-19 02:35:34] 2025-12-19 01:35:03,144 | INFO     | 
[2025-12-19 02:35:34] 2025-12-19 01:35:03,145 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2025-12-19 02:35:34] 2025-12-19 01:35:03,168 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 02:35:34] 2025-12-19 01:35:03,168 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 02:35:34] 2025-12-19 01:35:03,168 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 02:35:34] 2025-12-19 01:35:03,168 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 02:35:34] 2025-12-19 01:35:03,168 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 02:35:34] 2025-12-19 01:35:03,168 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 02:35:34] 2025-12-19 01:35:03,168 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 02:35:34] 2025-12-19 01:35:03,168 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 02:35:34] 2025-12-19 01:35:03,168 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 02:35:34] 2025-12-19 01:35:03,168 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 02:35:34] 2025-12-19 01:35:03,168 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 02:35:34] 2025-12-19 01:35:03,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 02:35:34] 2025-12-19 01:35:03,168 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 02:35:34] 2025-12-19 01:35:03,168 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 02:35:34] 2025-12-19 01:35:03,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 02:35:34] 2025-12-19 01:35:03,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 02:35:34] 2025-12-19 01:35:03,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 02:35:34] 2025-12-19 01:35:03,168 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 02:35:34] 2025-12-19 01:35:03,168 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 02:35:34] 2025-12-19 01:35:03,169 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 02:35:34] 2025-12-19 01:35:03,169 | INFO     | job 6930228640 has completed (purged errors)
[2025-12-19 02:35:34] 2025-12-19 01:35:03,169 | INFO     | overall cleanup function is called
[2025-12-19 02:35:34] 2025-12-19 01:35:04,175 | INFO     | --- collectZombieJob: --- 10, [167249]
[2025-12-19 02:35:34] 2025-12-19 01:35:04,176 | INFO     | zombie collector waiting for pid 167249
[2025-12-19 02:35:34] 2025-12-19 01:35:04,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 02:35:34] 2025-12-19 01:35:04,176 | INFO     | collected zombie processes
[2025-12-19 02:35:34] 2025-12-19 01:35:04,176 | INFO     | will attempt to kill all subprocesses of pid=167249
[2025-12-19 02:35:34] 2025-12-19 01:35:04,277 | INFO     | process IDs to be killed: [167249] (in reverse order)
[2025-12-19 02:35:34] 2025-12-19 01:35:04,336 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 02:35:34] 2025-12-19 01:35:04,336 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 02:35:34] 2025-12-19 01:35:04,340 | INFO     | did not find any defunct processes belonging to 167249
[2025-12-19 02:35:34] 2025-12-19 01:35:04,342 | INFO     | did not find any defunct processes belonging to 167249
[2025-12-19 02:35:34] 2025-12-19 01:35:04,343 | INFO     | ready for new job
[2025-12-19 02:35:34] 2025-12-19 01:35:04,343 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 02:35:34] 2025-12-19 01:35:04,344 | INFO     | ***************************************
[2025-12-19 02:35:34] 2025-12-19 01:35:04,344 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 02:35:34] 2025-12-19 01:35:04,344 | INFO     | ***************************************
[2025-12-19 02:35:34] 2025-12-19 01:35:04,344 | INFO     | 
[2025-12-19 02:35:34] 2025-12-19 01:35:04,345 | INFO     | pilot is running in a VM
[2025-12-19 02:35:34] 2025-12-19 01:35:04,345 | INFO     | architecture information:
[2025-12-19 02:35:34] 2025-12-19 01:35:04,345 | INFO     | executing command: cat /etc/os-release
[2025-12-19 02:35:34] 2025-12-19 01:35:04,358 | INFO     | cat /etc/os-release:
[2025-12-19 02:35:34] NAME="CentOS Linux"
[2025-12-19 02:35:34] VERSION="7 (Core)"
[2025-12-19 02:35:34] ID="centos"
[2025-12-19 02:35:34] ID_LIKE="rhel fedora"
[2025-12-19 02:35:34] VERSION_ID="7"
[2025-12-19 02:35:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 02:35:34] ANSI_COLOR="0;31"
[2025-12-19 02:35:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 02:35:34] HOME_URL="https://www.centos.org/"
[2025-12-19 02:35:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 02:35:34] 
[2025-12-19 02:35:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 02:35:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 02:35:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 02:35:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 02:35:34] 
[2025-12-19 02:35:34] 2025-12-19 01:35:04,358 | INFO     | ***************************************
[2025-12-19 02:35:34] 2025-12-19 01:35:04,861 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2025-12-19 02:35:34] 2025-12-19 01:35:04,876 | INFO     | sufficient remaining disk space (146768134144 B)
[2025-12-19 02:35:34] 2025-12-19 01:35:04,876 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 02:35:34] 2025-12-19 01:35:04,877 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 02:35:34] 2025-12-19 01:35:04,877 | INFO     | update_server=False
[2025-12-19 02:35:34] 2025-12-19 01:35:04,877 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 02:35:34] 2025-12-19 01:35:04,877 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 02:35:34] 2025-12-19 01:35:04,877 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 02:35:34] 2025-12-19 01:35:04,877 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 02:35:34] 2025-12-19 01:35:04,878 | INFO     | aborting loop
[2025-12-19 02:35:34] 2025-12-19 01:35:04,907 | INFO     | all job control threads have been joined
[2025-12-19 02:35:34] 2025-12-19 01:35:05,309 | INFO     | all data control threads have been joined
[2025-12-19 02:35:34] 2025-12-19 01:35:05,882 | INFO     | [job] queue monitor thread has finished
[2025-12-19 02:35:34] 2025-12-19 01:35:05,883 | INFO     | [job] retrieve thread has finished
[2025-12-19 02:35:34] 2025-12-19 01:35:05,883 | INFO     | [job] job monitor thread has finished
[2025-12-19 02:35:34] 2025-12-19 01:35:05,913 | INFO     | [job] control thread has finished
[2025-12-19 02:35:34] 2025-12-19 01:35:05,952 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 02:35:34] 2025-12-19 01:35:05,974 | INFO     | [payload] failed_post thread has finished
[2025-12-19 02:35:34] 2025-12-19 01:35:06,108 | INFO     | all payload control threads have been joined
[2025-12-19 02:35:34] 2025-12-19 01:35:06,314 | INFO     | [data] control thread has finished
[2025-12-19 02:35:34] 2025-12-19 01:35:06,615 | INFO     | [data] copytool_in thread has finished
[2025-12-19 02:35:34] 2025-12-19 01:35:06,781 | INFO     | [payload] validate_post thread has finished
[2025-12-19 02:35:34] 2025-12-19 01:35:06,883 | INFO     | [data] copytool_out thread has finished
[2025-12-19 02:35:34] 2025-12-19 01:35:07,114 | INFO     | [payload] control thread has finished
[2025-12-19 02:35:34] 2025-12-19 01:35:07,174 | INFO     | [job] validate thread has finished
[2025-12-19 02:35:34] 2025-12-19 01:35:07,203 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 02:35:34] 2025-12-19 01:35:07,203 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 02:35:34] 2025-12-19 01:35:07,642 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 02:35:34] 2025-12-19 01:35:11,649 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 02:35:34] 2025-12-19 01:35:13,953 | INFO     | [monitor] cgroup control has ended
[2025-12-19 02:35:34] 2025-12-19 01:35:15,554 | INFO     | job.realtimelogging is not enabled
[2025-12-19 02:35:34] 2025-12-19 01:35:16,560 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 02:35:34] 2025-12-19 01:35:17,189 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133088637744960)>', '<ExcThread(monitor, started 133087992203008)>']
[2025-12-19 02:35:34] 2025-12-19 01:35:22,215 | INFO     | all workflow threads have been joined
[2025-12-19 02:35:34] 2025-12-19 01:35:22,215 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 02:35:34] 2025-12-19 01:35:22,215 | INFO     | traces error code: 0
[2025-12-19 02:35:34] 2025-12-19 01:35:22,216 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 02:35:34] 2025-12-19 01:35:34,604 | INFO     | PID=160615 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-19 02:35:34] 2025-12-19 01:35:34,604 | INFO     | .. there are 3 such processes running
[2025-12-19 02:35:34] 2025-12-19 01:35:34,604 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 02:35:34] 2025-12-19 01:35:34,604 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 02:35:34] 2025-12-19 01:35:34,604 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 02:35:34] 2025-12-19 01:35:34,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 02:35:34] 2025-12-19 01:35:34,604 | INFO     | [monitor] control thread has ended
[2025-12-19 02:35:34] 2025-12-19 01:35:34,669 [wrapper] ==== pilot stdout END ====
[2025-12-19 02:35:34] 2025-12-19 01:35:34,674 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 02:35:34] 2025-12-19 01:35:34,679 [wrapper] pilotpid: 160615
[2025-12-19 02:35:34] 2025-12-19 01:35:34,683 [wrapper] Pilot exit status: 0
[2025-12-19 02:35:34] 2025-12-19 01:35:34,699 [wrapper] pandaids: 6930228640
[2025-12-19 02:35:34] 2025-12-19 01:35:34,743 [wrapper] cleanup supervisor_pilot  222894 160616
[2025-12-19 02:35:34] 2025-12-19 01:35:34,748 [wrapper] Test setup, not cleaning
[2025-12-19 02:35:34] 2025-12-19 01:35:34,753 [wrapper] apfmon messages muted
[2025-12-19 02:35:34] 2025-12-19 01:35:34,757 [wrapper] ==== wrapper stdout END ====
[2025-12-19 02:35:34] 2025-12-19 01:35:34,762 [wrapper] ==== wrapper stderr END ====
[2025-12-19 02:35:34]  *** Error codes and diagnostics ***
[2025-12-19 02:35:34]     "exeErrorCode": 0,
[2025-12-19 02:35:34]     "exeErrorDiag": "",
[2025-12-19 02:35:34]     "pilotErrorCode": 0,
[2025-12-19 02:35:34]     "pilotErrorDiag": "",
[2025-12-19 02:35:34]  *** Listing of results directory ***
[2025-12-19 02:35:34] insgesamt 411152
[2025-12-19 02:35:34] -rw-r--r-- 1 yeti boinc    579449 Dez 16 03:06 pilot3.tar.gz
[2025-12-19 02:35:34] -rwx------ 1 yeti boinc     36322 Dez 16 03:07 runpilot2-wrapper.sh
[2025-12-19 02:35:34] -rw-r--r-- 1 yeti boinc      5112 Dez 16 03:07 queuedata.json
[2025-12-19 02:35:34] -rw-r--r-- 1 yeti boinc       100 Dez 19 01:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 02:35:34] -rwxr-xr-x 1 yeti boinc      7986 Dez 19 01:22 run_atlas
[2025-12-19 02:35:34] -rw-r--r-- 1 yeti boinc       105 Dez 19 01:22 job.xml
[2025-12-19 02:35:34] -rw-r--r-- 2 yeti boinc     15847 Dez 19 01:22 start_atlas.sh
[2025-12-19 02:35:34] drwxrwx--x 2 yeti boinc      4096 Dez 19 01:22 shared
[2025-12-19 02:35:34] -rw-r--r-- 2 yeti boinc    592380 Dez 19 01:22 input.tar.gz
[2025-12-19 02:35:34] -rw-r--r-- 1 yeti boinc      6730 Dez 19 01:22 init_data.xml
[2025-12-19 02:35:34] -rw-r--r-- 2 yeti boinc 206197286 Dez 19 01:22 EVNT.47905905._000011.pool.root.1
[2025-12-19 02:35:34] -rw-r--r-- 1 yeti boinc         0 Dez 19 01:22 boinc_setup_complete
[2025-12-19 02:35:34] -rw-r--r-- 1 yeti boinc         0 Dez 19 01:22 boinc_lockfile
[2025-12-19 02:35:34] -rw-r--r-- 1 yeti boinc      2474 Dez 19 01:22 pandaJob.out
[2025-12-19 02:35:34] -rw------- 1 yeti boinc        52 Dez 19 01:22 setup.sh.local
[2025-12-19 02:35:34] -rw------- 1 yeti boinc    988880 Dez 19 01:23 agis_schedconf.cvmfs.json
[2025-12-19 02:35:34] -rw------- 1 yeti boinc   1516240 Dez 19 01:23 agis_ddmendpoints.agis.ALL.json
[2025-12-19 02:35:34] drwx------ 5 yeti boinc      4096 Dez 19 01:23 pilot3
[2025-12-19 02:35:34] -rw------- 1 yeti boinc 209100909 Dez 19 02:34 HITS.47905907._000652.pool.root.1
[2025-12-19 02:35:34] -rw-r--r-- 1 yeti boinc       529 Dez 19 02:34 boinc_task_state.xml
[2025-12-19 02:35:34] -rw------- 1 yeti boinc      1015 Dez 19 02:34 memory_monitor_summary.json
[2025-12-19 02:35:34] -rw------- 1 yeti boinc        95 Dez 19 02:34 pilot_heartbeat.json
[2025-12-19 02:35:34] -rw------- 1 yeti boinc    245603 Dez 19 02:34 log.47905907._000652.job.log.tgz.1
[2025-12-19 02:35:34] -rw------- 1 yeti boinc      7727 Dez 19 02:35 heartbeat.json
[2025-12-19 02:35:34] -rw-r--r-- 1 yeti boinc      8192 Dez 19 02:35 boinc_mmap_file
[2025-12-19 02:35:34] -rw-r--r-- 1 yeti boinc        27 Dez 19 02:35 wrapper_checkpoint.txt
[2025-12-19 02:35:34] -rw------- 1 yeti boinc       821 Dez 19 02:35 pilotlog.txt
[2025-12-19 02:35:34] -rw------- 1 yeti boinc    656424 Dez 19 02:35 log.47905907._000652.job.log.1
[2025-12-19 02:35:34] -rw------- 1 yeti boinc       357 Dez 19 02:35 output.list
[2025-12-19 02:35:34] -rw-r--r-- 1 yeti boinc       620 Dez 19 02:35 runtime_log
[2025-12-19 02:35:34] -rw------- 1 yeti boinc    921600 Dez 19 02:35 result.tar.gz
[2025-12-19 02:35:34] -rw-r--r-- 1 yeti boinc      9557 Dez 19 02:35 runtime_log.err
[2025-12-19 02:35:34] -rw------- 1 yeti boinc       640 Dez 19 02:35 MmTMDmCeZp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9hUKDmeq7LPn.diag
[2025-12-19 02:35:34] -rw-r--r-- 1 yeti boinc     21815 Dez 19 02:35 stderr.txt
[2025-12-19 02:35:34] HITS file was successfully produced:
[2025-12-19 02:35:34] -rw------- 1 yeti boinc 209100909 Dez 19 02:34 shared/HITS.pool.root.1
[2025-12-19 02:35:34]  *** Contents of shared directory: ***
[2025-12-19 02:35:34] insgesamt 407076
[2025-12-19 02:35:34] -rw-r--r-- 2 yeti boinc     15847 Dez 19 01:22 start_atlas.sh
[2025-12-19 02:35:34] -rw-r--r-- 2 yeti boinc    592380 Dez 19 01:22 input.tar.gz
[2025-12-19 02:35:34] -rw-r--r-- 2 yeti boinc 206197286 Dez 19 01:22 ATLAS.root_0
[2025-12-19 02:35:34] -rw------- 1 yeti boinc 209100909 Dez 19 02:34 HITS.pool.root.1
[2025-12-19 02:35:34] -rw------- 1 yeti boinc    921600 Dez 19 02:35 result.tar.gz
02:35:35 (156780): run_atlas exited; CPU time 16305.976194
02:35:35 (156780): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN