Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:11:26 (104074): wrapper (7.7.26015): starting
09:11:26 (104074): wrapper: running run_atlas (--nthreads 12)
[2025-12-18 09:11:26] Arguments: --nthreads 12
[2025-12-18 09:11:26] Threads: 12
[2025-12-18 09:11:26] Checking for CVMFS
[2025-12-18 09:11:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 09:11:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 09:11:27] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 09:11:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 09:11:28] 2.11.5.0 2451234 60049 360076 154157 1 463 41238408 45568001 14582 130560 0 486509658 99.780 319605868 23838 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-18 09:11:28] CVMFS is ok
[2025-12-18 09:11:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 09:11:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 09:11:28] Further information can be found at the LHC@home message board.
[2025-12-18 09:11:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 09:11:28] Checking for apptainer binary...
[2025-12-18 09:11:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 09:11:28] Running /usr/bin/apptainer --version
[2025-12-18 09:11:28] apptainer version 1.4.1-1.el9
[2025-12-18 09:11:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 09:11:28] wns0065.triumf.lcg
[2025-12-18 09:11:28] apptainer works
[2025-12-18 09:11:28] Set ATHENA_PROC_NUMBER=12
[2025-12-18 09:11:28] Set ATHENA_CORE_NUMBER=12
[2025-12-18 09:11:28] Starting ATLAS job with PandaID=6932716249
[2025-12-18 09:11:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 09:15:58]  *** The last 200 lines of the pilot log: ***
[2025-12-18 09:15:58] 2025-12-18 17:15:25,067 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 09:15:58] 2025-12-18 17:15:25,067 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | WARNING  | wrong length of table data, x=[1766077970.0], y=[1389.0] (must be same and length>=4)
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | could have reported an average CPU frequency of 2703 MHz (4 samples)
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | ..............................
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | . Timing measurements:
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | . get job = 0 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | . initial setup = 3 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | . payload setup = 10 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | . stage-in = 0 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | . payload execution = 27 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,069 | INFO     | . stage-out = 1 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,069 | INFO     | . log creation = 0 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,069 | INFO     | ..............................
[2025-12-18 09:15:58] 2025-12-18 17:15:25,069 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-18 09:15:58] 2025-12-18 17:15:25,069 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6932716249/pilotlog.txt
[2025-12-18 09:15:58] 2025-12-18 17:15:25,080 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-18 09:15:58] - Log from pilotlog.txt -
[2025-12-18 09:15:58] 2025-12-18 17:15:25,066 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6932716249/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 09:15:58] 2025-12-18 17:15:25,067 | INFO     | extracted standard info from prmon json
[2025-12-18 09:15:58] 2025-12-18 17:15:25,067 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 09:15:58] 2025-12-18 17:15:25,067 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 09:15:58] 2025-12-18 17:15:25,067 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 09:15:58] 2025-12-18 17:15:25,067 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | WARNING  | wrong length of table data, x=[1766077970.0], y=[1389.0] (must be same and length>=4)
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | could have reported an average CPU frequency of 2703 MHz (4 samples)
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | ..............................
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | . Timing measurements:
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | . get job = 0 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | . initial setup = 3 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | . payload setup = 10 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | . stage-in = 0 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | . payload execution = 27 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,069 | INFO     | . stage-out = 1 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,069 | INFO     | . log creation = 0 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,069 | INFO     | ..............................
[2025-12-18 09:15:58] 2025-12-18 17:15:25,069 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-18 09:15:58] 2025-12-18 17:15:25,069 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6932716249/pilotlog.txt
[2025-12-18 09:15:58] 2025-12-18 17:15:25,080 | WARNING  | 
[2025-12-18 09:15:58] [begin log extracts]
[2025-12-18 09:15:58] - Log from pilotlog.txt -
[2025-12-18 09:15:58] 2025-12-18 17:15:25,066 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6932716249/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 09:15:58] 2025-12-18 17:15:25,067 | INFO     | extracted standard info from prmon json
[2025-12-18 09:15:58] 2025-12-18 17:15:25,067 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 09:15:58] 2025-12-18 17:15:25,067 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 09:15:58] 2025-12-18 17:15:25,067 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 09:15:58] 2025-12-18 17:15:25,067 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | WARNING  | wrong length of table data, x=[1766077970.0], y=[1389.0] (must be same and length>=4)
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | could have reported an average CPU frequency of 2703 MHz (4 samples)
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | ..............................
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | . Timing measurements:
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | . get job = 0 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | . initial setup = 3 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | . payload setup = 10 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | . stage-in = 0 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,068 | INFO     | . payload execution = 27 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,069 | INFO     | . stage-out = 1 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,069 | INFO     | . log creation = 0 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,069 | INFO     | ..............................
[2025-12-18 09:15:58] 2025-12-18 17:15:25,069 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-18 09:15:58] 2025-12-18 17:15:25,069 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6932716249/pilotlog.txt
[2025-12-18 09:15:58] [end log extracts]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,080 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-18 09:15:58] 2025-12-18 17:15:25,081 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-18 09:15:58] 2025-12-18 17:15:25,261 | INFO     | 
[2025-12-18 09:15:58] 2025-12-18 17:15:25,261 | INFO     | job summary report
[2025-12-18 09:15:58] 2025-12-18 17:15:25,261 | INFO     | --------------------------------------------------
[2025-12-18 09:15:58] 2025-12-18 17:15:25,261 | INFO     | PanDA job id: 6932716249
[2025-12-18 09:15:58] 2025-12-18 17:15:25,261 | INFO     | task id: 47886933
[2025-12-18 09:15:58] 2025-12-18 17:15:25,261 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-18 09:13:03,129 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-18 09:15:58] 2025-12-18 17:15:25,261 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 09:15:58] 2025-12-18 17:15:25,261 | INFO     | pilot state: failed 
[2025-12-18 09:15:58] 2025-12-18 17:15:25,261 | INFO     | transexitcode: 65
[2025-12-18 09:15:58] 2025-12-18 17:15:25,261 | INFO     | exeerrorcode: 65
[2025-12-18 09:15:58] 2025-12-18 17:15:25,261 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-18 09:15:58] 2025-12-18 17:15:25,261 | INFO     | exitcode: 65
[2025-12-18 09:15:58] 2025-12-18 17:15:25,261 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-18 09:15:58] 2025-12-18 17:15:25,261 | INFO     | cpuconsumptiontime: 15 s
[2025-12-18 09:15:58] 2025-12-18 17:15:25,261 | INFO     | nevents: 0
[2025-12-18 09:15:58] 2025-12-18 17:15:25,261 | INFO     | neventsw: 0
[2025-12-18 09:15:58] 2025-12-18 17:15:25,262 | INFO     | pid: 114385
[2025-12-18 09:15:58] 2025-12-18 17:15:25,262 | INFO     | pgrp: 114385
[2025-12-18 09:15:58] 2025-12-18 17:15:25,262 | INFO     | corecount: 12
[2025-12-18 09:15:58] 2025-12-18 17:15:25,262 | INFO     | event service: False
[2025-12-18 09:15:58] 2025-12-18 17:15:25,262 | INFO     | sizes: {0: 2283737, 1: 2283821, 2: 2284020, 13: 2284020, 18: 2284338, 24: 2284366, 41: 2307742, 42: 2307718, 44: 2312094, 174: 2312232}
[2025-12-18 09:15:58] 2025-12-18 17:15:25,262 | INFO     | --------------------------------------------------
[2025-12-18 09:15:58] 2025-12-18 17:15:25,262 | INFO     | 
[2025-12-18 09:15:58] 2025-12-18 17:15:25,263 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-18 09:15:58] 2025-12-18 17:15:25,333 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,333 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,333 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,333 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,333 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,334 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,334 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,334 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,334 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,334 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,334 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,334 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,334 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,334 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 09:15:58] 2025-12-18 17:15:25,334 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,334 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 09:15:58] 2025-12-18 17:15:25,334 | INFO     | job 6932716249 has completed (purged errors)
[2025-12-18 09:15:58] 2025-12-18 17:15:25,334 | INFO     | overall cleanup function is called
[2025-12-18 09:15:58] 2025-12-18 17:15:26,341 | INFO     | --- collectZombieJob: --- 10, [114385]
[2025-12-18 09:15:58] 2025-12-18 17:15:26,341 | INFO     | zombie collector waiting for pid 114385
[2025-12-18 09:15:58] 2025-12-18 17:15:26,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 09:15:58] 2025-12-18 17:15:26,341 | INFO     | collected zombie processes
[2025-12-18 09:15:58] 2025-12-18 17:15:26,341 | INFO     | will attempt to kill all subprocesses of pid=114385
[2025-12-18 09:15:58] 2025-12-18 17:15:27,102 | INFO     | process IDs to be killed: [114385] (in reverse order)
[2025-12-18 09:15:58] 2025-12-18 17:15:27,161 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 09:15:58] 2025-12-18 17:15:27,162 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 09:15:58] 2025-12-18 17:15:27,168 | INFO     | did not find any defunct processes belonging to 114385
[2025-12-18 09:15:58] 2025-12-18 17:15:27,175 | INFO     | did not find any defunct processes belonging to 114385
[2025-12-18 09:15:58] 2025-12-18 17:15:27,175 | INFO     | ready for new job
[2025-12-18 09:15:58] 2025-12-18 17:15:27,175 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 09:15:58] 2025-12-18 17:15:27,176 | INFO     | ***************************************
[2025-12-18 09:15:58] 2025-12-18 17:15:27,177 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 09:15:58] 2025-12-18 17:15:27,177 | INFO     | ***************************************
[2025-12-18 09:15:58] 2025-12-18 17:15:27,177 | INFO     | 
[2025-12-18 09:15:58] 2025-12-18 17:15:27,179 | INFO     | architecture information:
[2025-12-18 09:15:58] 2025-12-18 17:15:27,179 | INFO     | executing command: cat /etc/os-release
[2025-12-18 09:15:58] 2025-12-18 17:15:27,190 | INFO     | cat /etc/os-release:
[2025-12-18 09:15:58] NAME="CentOS Linux"
[2025-12-18 09:15:58] VERSION="7 (Core)"
[2025-12-18 09:15:58] ID="centos"
[2025-12-18 09:15:58] ID_LIKE="rhel fedora"
[2025-12-18 09:15:58] VERSION_ID="7"
[2025-12-18 09:15:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 09:15:58] ANSI_COLOR="0;31"
[2025-12-18 09:15:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 09:15:58] HOME_URL="https://www.centos.org/"
[2025-12-18 09:15:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 09:15:58] 
[2025-12-18 09:15:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 09:15:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 09:15:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 09:15:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 09:15:58] 
[2025-12-18 09:15:58] 2025-12-18 17:15:27,190 | INFO     | ***************************************
[2025-12-18 09:15:58] 2025-12-18 17:15:27,694 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-18 09:15:58] 2025-12-18 17:15:27,795 | INFO     | sufficient remaining disk space (2116381835264 B)
[2025-12-18 09:15:58] 2025-12-18 17:15:27,795 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 09:15:58] 2025-12-18 17:15:27,796 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 09:15:58] 2025-12-18 17:15:27,796 | INFO     | update_server=False
[2025-12-18 09:15:58] 2025-12-18 17:15:27,796 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 09:15:58] 2025-12-18 17:15:27,800 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 09:15:58] 2025-12-18 17:15:27,837 | INFO     | all job control threads have been joined
[2025-12-18 09:15:58] 2025-12-18 17:15:28,085 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 09:15:58] 2025-12-18 17:15:28,085 | INFO     | aborting loop
[2025-12-18 09:15:58] 2025-12-18 17:15:28,801 | INFO     | [job] retrieve thread has finished
[2025-12-18 09:15:58] 2025-12-18 17:15:28,826 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 09:15:58] 2025-12-18 17:15:28,826 | INFO     | all data control threads have been joined
[2025-12-18 09:15:58] 2025-12-18 17:15:28,843 | INFO     | [job] control thread has finished
[2025-12-18 09:15:58] 2025-12-18 17:15:29,091 | INFO     | [job] job monitor thread has finished
[2025-12-18 09:15:58] 2025-12-18 17:15:29,185 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 09:15:58] 2025-12-18 17:15:29,271 | INFO     | [data] copytool_in thread has finished
[2025-12-18 09:15:58] 2025-12-18 17:15:29,304 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 09:15:58] 2025-12-18 17:15:29,309 | INFO     | all payload control threads have been joined
[2025-12-18 09:15:58] 2025-12-18 17:15:29,577 | INFO     | [payload] failed_post thread has finished
[2025-12-18 09:15:58] 2025-12-18 17:15:29,617 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 09:15:58] 2025-12-18 17:15:29,701 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 09:15:58] 2025-12-18 17:15:29,831 | INFO     | [data] control thread has finished
[2025-12-18 09:15:58] 2025-12-18 17:15:30,118 | INFO     | [job] validate thread has finished
[2025-12-18 09:15:58] 2025-12-18 17:15:30,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 09:15:58] 2025-12-18 17:15:30,314 | INFO     | [payload] validate_post thread has finished
[2025-12-18 09:15:58] 2025-12-18 17:15:30,315 | INFO     | [payload] control thread has finished
[2025-12-18 09:15:58] 2025-12-18 17:15:30,834 | INFO     | [data] copytool_out thread has finished
[2025-12-18 09:15:58] 2025-12-18 17:15:31,212 | INFO     | [job] queue monitor thread has finished
[2025-12-18 09:15:58] 2025-12-18 17:15:31,812 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 09:15:58] 2025-12-18 17:15:47,453 | INFO     | [monitor] cgroup control has ended
[2025-12-18 09:15:58] 2025-12-18 17:15:48,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140536992397120)>', '<ExcThread(monitor, started 140536589559552)>']
[2025-12-18 09:15:58] 2025-12-18 17:15:53,501 | INFO     | all workflow threads have been joined
[2025-12-18 09:15:58] 2025-12-18 17:15:53,501 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 09:15:58] 2025-12-18 17:15:53,501 | INFO     | traces error code: 0
[2025-12-18 09:15:58] 2025-12-18 17:15:53,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 09:15:58] 2025-12-18 17:15:57,627 | INFO     | PID=107780 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-18 09:15:58] 2025-12-18 17:15:57,628 | INFO     | .. there are 21 such processes running
[2025-12-18 09:15:58] 2025-12-18 17:15:57,629 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 09:15:58] 2025-12-18 17:15:57,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 09:15:58] 2025-12-18 17:15:57,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 09:15:58] 2025-12-18 17:15:57,630 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 09:15:58] 2025-12-18 17:15:57,630 | CRITICAL | thread 'MainThread' is not alive
[2025-12-18 09:15:58] 2025-12-18 17:15:57,630 | INFO     | [monitor] control thread has ended
[2025-12-18 09:15:58] 2025-12-18 17:15:58,066 [wrapper] ==== pilot stdout END ====
[2025-12-18 09:15:58] 2025-12-18 17:15:58,077 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 09:15:58] 2025-12-18 17:15:58,137 [wrapper] pilotpid: 107780
[2025-12-18 09:15:58] 2025-12-18 17:15:58,142 [wrapper] Pilot exit status: 0
[2025-12-18 09:15:58] 2025-12-18 17:15:58,212 [wrapper] pandaids: 6932716249
[2025-12-18 09:15:58] 2025-12-18 17:15:58,276 [wrapper] cleanup supervisor_pilot  107786 107781
[2025-12-18 09:15:58] 2025-12-18 17:15:58,278 [wrapper] Test setup, not cleaning
[2025-12-18 09:15:58] 2025-12-18 17:15:58,280 [wrapper] apfmon messages muted
[2025-12-18 09:15:58] 2025-12-18 17:15:58,281 [wrapper] ==== wrapper stdout END ====
[2025-12-18 09:15:58] 2025-12-18 17:15:58,283 [wrapper] ==== wrapper stderr END ====
[2025-12-18 09:15:58]  *** Error codes and diagnostics ***
[2025-12-18 09:15:58]     "exeErrorCode": 65,
[2025-12-18 09:15:58]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-18 09:15:58]     "pilotErrorCode": 1305,
[2025-12-18 09:15:58]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-18 09:15:58]  *** Listing of results directory ***
[2025-12-18 09:15:58] total 191936
[2025-12-18 09:15:58] -rw-r--r--. 1 boinc boinc    579449 Dec 17 19:11 pilot3.tar.gz
[2025-12-18 09:15:58] -rwx------. 1 boinc boinc     36322 Dec 17 19:14 runpilot2-wrapper.sh
[2025-12-18 09:15:58] -rw-r--r--. 1 boinc boinc      5112 Dec 17 19:15 queuedata.json
[2025-12-18 09:15:58] -rw-r--r--. 1 boinc boinc       100 Dec 18 09:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 09:15:58] -rwxr-xr-x. 1 boinc boinc      7986 Dec 18 09:11 run_atlas
[2025-12-18 09:15:58] -rw-r--r--. 1 boinc boinc       105 Dec 18 09:11 job.xml
[2025-12-18 09:15:58] -rw-r--r--. 1 boinc boinc      6596 Dec 18 09:11 init_data.xml
[2025-12-18 09:15:58] -rw-r--r--. 2 boinc boinc 192409200 Dec 18 09:11 EVNT.47886929._000569.pool.root.1
[2025-12-18 09:15:58] -rw-r--r--. 2 boinc boinc     15847 Dec 18 09:11 start_atlas.sh
[2025-12-18 09:15:58] drwxrwx--x. 2 boinc boinc      4096 Dec 18 09:11 shared
[2025-12-18 09:15:58] -rw-r--r--. 2 boinc boinc    592401 Dec 18 09:11 input.tar.gz
[2025-12-18 09:15:58] -rw-r--r--. 1 boinc boinc         0 Dec 18 09:11 boinc_lockfile
[2025-12-18 09:15:58] -rw-r--r--. 1 boinc boinc      2514 Dec 18 09:11 pandaJob.out
[2025-12-18 09:15:58] -rw-------. 1 boinc boinc    988125 Dec 18 09:11 agis_schedconf.cvmfs.json
[2025-12-18 09:15:58] -rw-------. 1 boinc boinc   1516240 Dec 18 09:11 agis_ddmendpoints.agis.ALL.json
[2025-12-18 09:15:58] drwx------. 5 boinc boinc      4096 Dec 18 09:11 pilot3
[2025-12-18 09:15:58] -rw-r--r--. 1 boinc boinc       522 Dec 18 09:12 boinc_task_state.xml
[2025-12-18 09:15:58] -rw-------. 1 boinc boinc       966 Dec 18 09:13 memory_monitor_summary.json
[2025-12-18 09:15:58] -rw-------. 1 boinc boinc     21209 Dec 18 09:13 log.47886933._013286.job.log.tgz.1
[2025-12-18 09:15:58] -rw-------. 1 boinc boinc      8393 Dec 18 09:15 heartbeat.json
[2025-12-18 09:15:58] -rw-r--r--. 1 boinc boinc      8192 Dec 18 09:15 boinc_mmap_file
[2025-12-18 09:15:58] -rw-r--r--. 1 boinc boinc        22 Dec 18 09:15 wrapper_checkpoint.txt
[2025-12-18 09:15:58] -rw-------. 1 boinc boinc        95 Dec 18 09:15 pilot_heartbeat.json
[2025-12-18 09:15:58] -rw-------. 1 boinc boinc       892 Dec 18 09:15 pilotlog.txt
[2025-12-18 09:15:58] -rw-------. 1 boinc boinc     89064 Dec 18 09:15 log.47886933._013286.job.log.1
[2025-12-18 09:15:58] -rw-------. 1 boinc boinc       188 Dec 18 09:15 output.list
[2025-12-18 09:15:58] -rw-r--r--. 1 boinc boinc       620 Dec 18 09:15 runtime_log
[2025-12-18 09:15:58] -rw-------. 1 boinc boinc    133120 Dec 18 09:15 result.tar.gz
[2025-12-18 09:15:58] -rw-r--r--. 1 boinc boinc      8636 Dec 18 09:15 runtime_log.err
[2025-12-18 09:15:58] -rw-------. 1 boinc boinc       644 Dec 18 09:15 2oLNDmheJq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXIdKDmX2dfgn.diag
[2025-12-18 09:15:58] -rw-r--r--. 1 boinc boinc     21799 Dec 18 09:15 stderr.txt
[2025-12-18 09:15:58] No HITS result produced
[2025-12-18 09:15:58]  *** Contents of shared directory: ***
[2025-12-18 09:15:58] total 188632
[2025-12-18 09:15:58] -rw-r--r--. 2 boinc boinc 192409200 Dec 18 09:11 ATLAS.root_0
[2025-12-18 09:15:58] -rw-r--r--. 2 boinc boinc     15847 Dec 18 09:11 start_atlas.sh
[2025-12-18 09:15:58] -rw-r--r--. 2 boinc boinc    592401 Dec 18 09:11 input.tar.gz
[2025-12-18 09:15:58] -rw-------. 1 boinc boinc    133120 Dec 18 09:15 result.tar.gz
09:15:59 (104074): run_atlas exited; CPU time 23.767891
09:15:59 (104074): called boinc_finish(0)

</stderr_txt>
]]>

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