Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
02:33:27 (228194): wrapper (7.7.26015): starting
02:33:27 (228194): wrapper: running run_atlas (--nthreads 4)
[2025-12-19 02:33:27] Arguments: --nthreads 4
[2025-12-19 02:33:27] Threads: 4
[2025-12-19 02:33:27] Checking for CVMFS
[2025-12-19 02:33:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 02:33:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 02:33:27] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 02:33:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 02:33:28] 2.13.1.0 189701 7319 101872 154171 0 57 8012943 10240001 1822 130560 0 21141254 99.997 270275 251 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-19 02:33:28] CVMFS is ok
[2025-12-19 02:33:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 02:33:28] Checking for apptainer binary...
[2025-12-19 02:33:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 02:33:28] Running /usr/bin/apptainer --version
[2025-12-19 02:33:28] apptainer version 1.4.2
[2025-12-19 02:33:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 02:33:28] julianvlneu
[2025-12-19 02:33:28] apptainer works
[2025-12-19 02:33:28] Set ATHENA_PROC_NUMBER=4
[2025-12-19 02:33:28] Set ATHENA_CORE_NUMBER=4
[2025-12-19 02:33:28] Starting ATLAS job with PandaID=6933076777
[2025-12-19 02:33:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 03:43:57]  *** The last 200 lines of the pilot log: ***
[2025-12-19 03:43:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-19 03:43:57]  replicas=None
[2025-12-19 03:43:57]  scope=mc23_13p6TeV
[2025-12-19 03:43:57]  status=None
[2025-12-19 03:43:57]  status_code=0
[2025-12-19 03:43:57]  storage_token=
[2025-12-19 03:43:57]  surl=/var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6933076777/log.47898782._006371.job.log.tgz.1
[2025-12-19 03:43:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/c6/log.47898782._006371.job.log.tgz.1
[2025-12-19 03:43:57]  workdir=None
[2025-12-19 03:43:57] ]
[2025-12-19 03:43:57] 2025-12-19 02:43:18,518 | INFO     | transferring file log.47898782._006371.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6933076777/log.47898782._006371.job.log.tgz.1 to /var/li
[2025-12-19 03:43:57] 2025-12-19 02:43:18,519 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6933076777/log.47898782._006371.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-12-19 03:43:57] 2025-12-19 02:43:18,539 | INFO     | adding to output.list: log.47898782._006371.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/c6/log.47898782._006371.job.log.tg
[2025-12-19 03:43:57] 2025-12-19 02:43:18,540 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-19 03:43:57] 2025-12-19 02:43:18,540 | INFO     | summary of transferred files:
[2025-12-19 03:43:57] 2025-12-19 02:43:18,540 | INFO     |  -- lfn=log.47898782._006371.job.log.tgz.1, status_code=0, status=transferred
[2025-12-19 03:43:57] 2025-12-19 02:43:18,540 | INFO     | stage-out finished correctly
[2025-12-19 03:43:57] 2025-12-19 02:43:18,820 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-19 03:43:57] 2025-12-19 02:43:18,842 | INFO     | job 6933076777 has state=finished
[2025-12-19 03:43:57] 2025-12-19 02:43:18,843 | INFO     | preparing for final server update for job 6933076777 in state='finished'
[2025-12-19 03:43:57] 2025-12-19 02:43:18,843 | INFO     | this job has now completed (state=finished)
[2025-12-19 03:43:57] 2025-12-19 02:43:18,843 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-19 03:43:57] 2025-12-19 02:43:18,843 | INFO     | log transfer has been attempted: DONE
[2025-12-19 03:43:57] 2025-12-19 02:43:18,843 | INFO     | job 6933076777 has finished - writing final server update
[2025-12-19 03:43:57] 2025-12-19 02:43:18,843 | INFO     | total number of processed events: 400 (read)
[2025-12-19 03:43:57] 2025-12-19 02:43:18,844 | INFO     | executing command: lscpu
[2025-12-19 03:43:57] 2025-12-19 02:43:18,867 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-19 03:43:57] 2025-12-19 02:43:19,687 | INFO     | time since job start (4179s) is within the limit (174528.0s)
[2025-12-19 03:43:57] 2025-12-19 02:43:19,847 | WARNING  | process 238673 can no longer be monitored (due to stat problems) - aborting
[2025-12-19 03:43:57] 2025-12-19 02:43:19,847 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6933076777/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 03:43:57] 2025-12-19 02:43:19,963 | INFO     | number of running child processes to parent process 238673: 1
[2025-12-19 03:43:57] 2025-12-19 02:43:19,963 | INFO     | maximum number of monitored processes: 6
[2025-12-19 03:43:57] 2025-12-19 02:43:21,693 | INFO     | time since job start (4181s) is within the limit (174528.0s)
[2025-12-19 03:43:57] 2025-12-19 02:43:22,467 | INFO     | monitor loop #319: job 0:6933076777 is in state 'finished'
[2025-12-19 03:43:57] 2025-12-19 02:43:22,467 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 03:43:57] 2025-12-19 02:43:23,699 | INFO     | time since job start (4183s) is within the limit (174528.0s)
[2025-12-19 03:43:57] 2025-12-19 02:43:24,198 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-19 03:43:57] 2025-12-19 02:43:24,199 | INFO     | found 24 cores (12 cores per socket, 2 sockets) , CPU MHz: 4399.884000000001
[2025-12-19 03:43:57] 2025-12-19 02:43:24,200 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6933076777/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 03:43:57] 2025-12-19 02:43:24,200 | INFO     | extracted standard info from prmon json
[2025-12-19 03:43:57] 2025-12-19 02:43:24,200 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 03:43:57] 2025-12-19 02:43:24,200 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 03:43:57] 2025-12-19 02:43:24,201 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 03:43:57] 2025-12-19 02:43:24,201 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 03:43:57] 2025-12-19 02:43:24,201 | INFO     | fitting pss+swap vs Time
[2025-12-19 03:43:57] 2025-12-19 02:43:24,201 | INFO     | sum of square deviations: 70364110.0
[2025-12-19 03:43:57] 2025-12-19 02:43:24,202 | INFO     | sum of deviations: -3179041473.9999976
[2025-12-19 03:43:57] 2025-12-19 02:43:24,202 | INFO     | mean x: 1766110185.0
[2025-12-19 03:43:57] 2025-12-19 02:43:24,202 | INFO     | mean y: 2401914.1147540985
[2025-12-19 03:43:57] 2025-12-19 02:43:24,202 | INFO     | intersect: 79795033779.54742
[2025-12-19 03:43:57] 2025-12-19 02:43:24,202 | INFO     | chi2: 0.014166043047942101
[2025-12-19 03:43:57] 2025-12-19 02:43:24,202 | INFO     | current memory leak: -45.18 B/s (using 61 data points, chi2=0.01)
[2025-12-19 03:43:57] 2025-12-19 02:43:24,202 | INFO     | could have reported an average CPU frequency of 4399 MHz (6 samples)
[2025-12-19 03:43:57] 2025-12-19 02:43:24,202 | INFO     | ..............................
[2025-12-19 03:43:57] 2025-12-19 02:43:24,202 | INFO     | . Timing measurements:
[2025-12-19 03:43:57] 2025-12-19 02:43:24,202 | INFO     | . get job = 0 s
[2025-12-19 03:43:57] 2025-12-19 02:43:24,202 | INFO     | . initial setup = 1 s
[2025-12-19 03:43:57] 2025-12-19 02:43:24,202 | INFO     | . payload setup = 7 s
[2025-12-19 03:43:57] 2025-12-19 02:43:24,202 | INFO     | . stage-in = 0 s
[2025-12-19 03:43:57] 2025-12-19 02:43:24,202 | INFO     | . payload execution = 4150 s
[2025-12-19 03:43:57] 2025-12-19 02:43:24,202 | INFO     | . stage-out = 0 s
[2025-12-19 03:43:57] 2025-12-19 02:43:24,202 | INFO     | . log creation = 0 s
[2025-12-19 03:43:57] 2025-12-19 02:43:24,202 | INFO     | ..............................
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | 
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | job summary report
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | --------------------------------------------------
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | PanDA job id: 6933076777
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | task id: 47898782
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | errors: (none)
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | pilot state: finished 
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | transexitcode: 0
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | exeerrorcode: 0
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | exeerrordiag: 
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | exitcode: 0
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | exitmsg: OK
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | cpuconsumptiontime: 15674 s
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | nevents: 400
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | neventsw: 0
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | pid: 238673
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | pgrp: 238673
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | corecount: 4
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | event service: False
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | sizes: {0: 2283994, 5: 2284256, 11: 2284312, 4161: 2310202, 4162: 2319284, 4167: 2319422}
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | --------------------------------------------------
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | 
[2025-12-19 03:43:57] 2025-12-19 02:43:24,712 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2025-12-19 03:43:57] 2025-12-19 02:43:24,733 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 03:43:57] 2025-12-19 02:43:24,733 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 03:43:57] 2025-12-19 02:43:24,733 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 03:43:57] 2025-12-19 02:43:24,733 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 03:43:57] 2025-12-19 02:43:24,733 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 03:43:57] 2025-12-19 02:43:24,733 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 03:43:57] 2025-12-19 02:43:24,733 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 03:43:57] 2025-12-19 02:43:24,733 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 03:43:57] 2025-12-19 02:43:24,734 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 03:43:57] 2025-12-19 02:43:24,734 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 03:43:57] 2025-12-19 02:43:24,734 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 03:43:57] 2025-12-19 02:43:24,734 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 03:43:57] 2025-12-19 02:43:24,734 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 03:43:57] 2025-12-19 02:43:24,734 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 03:43:57] 2025-12-19 02:43:24,734 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 03:43:57] 2025-12-19 02:43:24,734 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 03:43:57] 2025-12-19 02:43:24,734 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 03:43:57] 2025-12-19 02:43:24,734 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 03:43:57] 2025-12-19 02:43:24,734 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 03:43:57] 2025-12-19 02:43:24,734 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 03:43:57] 2025-12-19 02:43:24,734 | INFO     | job 6933076777 has completed (purged errors)
[2025-12-19 03:43:57] 2025-12-19 02:43:24,735 | INFO     | overall cleanup function is called
[2025-12-19 03:43:57] 2025-12-19 02:43:25,741 | INFO     | --- collectZombieJob: --- 10, [238673]
[2025-12-19 03:43:57] 2025-12-19 02:43:25,742 | INFO     | zombie collector waiting for pid 238673
[2025-12-19 03:43:57] 2025-12-19 02:43:25,742 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 03:43:57] 2025-12-19 02:43:25,742 | INFO     | collected zombie processes
[2025-12-19 03:43:57] 2025-12-19 02:43:25,742 | INFO     | will attempt to kill all subprocesses of pid=238673
[2025-12-19 03:43:57] 2025-12-19 02:43:25,841 | INFO     | process IDs to be killed: [238673] (in reverse order)
[2025-12-19 03:43:57] 2025-12-19 02:43:25,901 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 03:43:57] 2025-12-19 02:43:25,901 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 03:43:57] 2025-12-19 02:43:25,905 | INFO     | did not find any defunct processes belonging to 238673
[2025-12-19 03:43:57] 2025-12-19 02:43:25,908 | INFO     | did not find any defunct processes belonging to 238673
[2025-12-19 03:43:57] 2025-12-19 02:43:25,908 | INFO     | ready for new job
[2025-12-19 03:43:57] 2025-12-19 02:43:25,908 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 03:43:57] 2025-12-19 02:43:25,910 | INFO     | ***************************************
[2025-12-19 03:43:57] 2025-12-19 02:43:25,910 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 03:43:57] 2025-12-19 02:43:25,910 | INFO     | ***************************************
[2025-12-19 03:43:57] 2025-12-19 02:43:25,910 | INFO     | 
[2025-12-19 03:43:57] 2025-12-19 02:43:25,910 | INFO     | pilot is running in a VM
[2025-12-19 03:43:57] 2025-12-19 02:43:25,910 | INFO     | architecture information:
[2025-12-19 03:43:57] 2025-12-19 02:43:25,911 | INFO     | executing command: cat /etc/os-release
[2025-12-19 03:43:57] 2025-12-19 02:43:25,924 | INFO     | cat /etc/os-release:
[2025-12-19 03:43:57] NAME="CentOS Linux"
[2025-12-19 03:43:57] VERSION="7 (Core)"
[2025-12-19 03:43:57] ID="centos"
[2025-12-19 03:43:57] ID_LIKE="rhel fedora"
[2025-12-19 03:43:57] VERSION_ID="7"
[2025-12-19 03:43:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 03:43:57] ANSI_COLOR="0;31"
[2025-12-19 03:43:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 03:43:57] HOME_URL="https://www.centos.org/"
[2025-12-19 03:43:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 03:43:57] 
[2025-12-19 03:43:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 03:43:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 03:43:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 03:43:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 03:43:57] 
[2025-12-19 03:43:57] 2025-12-19 02:43:25,924 | INFO     | ***************************************
[2025-12-19 03:43:57] 2025-12-19 02:43:26,425 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2025-12-19 03:43:57] 2025-12-19 02:43:26,439 | INFO     | sufficient remaining disk space (145428054016 B)
[2025-12-19 03:43:57] 2025-12-19 02:43:26,440 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 03:43:57] 2025-12-19 02:43:26,440 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 03:43:57] 2025-12-19 02:43:26,440 | INFO     | update_server=False
[2025-12-19 03:43:57] 2025-12-19 02:43:26,440 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 03:43:57] 2025-12-19 02:43:26,440 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 03:43:57] 2025-12-19 02:43:26,440 | INFO     | aborting loop
[2025-12-19 03:43:57] 2025-12-19 02:43:26,581 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 03:43:57] 2025-12-19 02:43:27,148 | INFO     | all data control threads have been joined
[2025-12-19 03:43:57] 2025-12-19 02:43:27,148 | INFO     | all payload control threads have been joined
[2025-12-19 03:43:57] 2025-12-19 02:43:27,257 | INFO     | all job control threads have been joined
[2025-12-19 03:43:57] 2025-12-19 02:43:27,446 | INFO     | [job] retrieve thread has finished
[2025-12-19 03:43:57] 2025-12-19 02:43:27,446 | INFO     | [job] job monitor thread has finished
[2025-12-19 03:43:57] 2025-12-19 02:43:27,994 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 03:43:57] 2025-12-19 02:43:28,153 | INFO     | [data] control thread has finished
[2025-12-19 03:43:57] 2025-12-19 02:43:28,154 | INFO     | [payload] control thread has finished
[2025-12-19 03:43:57] 2025-12-19 02:43:28,181 | INFO     | [data] copytool_in thread has finished
[2025-12-19 03:43:57] 2025-12-19 02:43:28,262 | INFO     | [job] control thread has finished
[2025-12-19 03:43:57] 2025-12-19 02:43:28,349 | INFO     | [payload] failed_post thread has finished
[2025-12-19 03:43:57] 2025-12-19 02:43:28,582 | INFO     | [data] copytool_out thread has finished
[2025-12-19 03:43:57] 2025-12-19 02:43:28,724 | INFO     | [job] validate thread has finished
[2025-12-19 03:43:57] 2025-12-19 02:43:28,788 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 03:43:57] 2025-12-19 02:43:28,794 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 03:43:57] 2025-12-19 02:43:28,853 | INFO     | [payload] validate_post thread has finished
[2025-12-19 03:43:57] 2025-12-19 02:43:29,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 03:43:57] 2025-12-19 02:43:29,356 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 03:43:57] 2025-12-19 02:43:30,248 | INFO     | [job] queue monitor thread has finished
[2025-12-19 03:43:57] 2025-12-19 02:43:33,363 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 03:43:57] 2025-12-19 02:43:36,616 | INFO     | job.realtimelogging is not enabled
[2025-12-19 03:43:57] 2025-12-19 02:43:37,622 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 03:43:57] 2025-12-19 02:43:46,155 | INFO     | [monitor] cgroup control has ended
[2025-12-19 03:43:57] 2025-12-19 02:43:47,901 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137299134523200)>', '<ExcThread(monitor, started 137298377152256)>']
[2025-12-19 03:43:57] 2025-12-19 02:43:52,927 | INFO     | all workflow threads have been joined
[2025-12-19 03:43:57] 2025-12-19 02:43:52,927 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 03:43:57] 2025-12-19 02:43:52,928 | INFO     | traces error code: 0
[2025-12-19 03:43:57] 2025-12-19 02:43:52,928 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 03:43:57] 2025-12-19 02:43:56,905 | INFO     | PID=232038 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-19 03:43:57] 2025-12-19 02:43:56,905 | INFO     | .. there are 3 such processes running
[2025-12-19 03:43:57] 2025-12-19 02:43:56,905 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 03:43:57] 2025-12-19 02:43:56,905 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 03:43:57] 2025-12-19 02:43:56,906 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 03:43:57] 2025-12-19 02:43:56,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 03:43:57] 2025-12-19 02:43:56,906 | INFO     | [monitor] control thread has ended
[2025-12-19 03:43:57] 2025-12-19 02:43:56,973 [wrapper] ==== pilot stdout END ====
[2025-12-19 03:43:57] 2025-12-19 02:43:56,977 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 03:43:57] 2025-12-19 02:43:56,982 [wrapper] pilotpid: 232038
[2025-12-19 03:43:57] 2025-12-19 02:43:56,986 [wrapper] Pilot exit status: 0
[2025-12-19 03:43:57] 2025-12-19 02:43:57,003 [wrapper] pandaids: 6933076777
[2025-12-19 03:43:57] 2025-12-19 02:43:57,046 [wrapper] cleanup supervisor_pilot  298804 232039
[2025-12-19 03:43:57] 2025-12-19 02:43:57,051 [wrapper] Test setup, not cleaning
[2025-12-19 03:43:57] 2025-12-19 02:43:57,056 [wrapper] apfmon messages muted
[2025-12-19 03:43:57] 2025-12-19 02:43:57,060 [wrapper] ==== wrapper stdout END ====
[2025-12-19 03:43:57] 2025-12-19 02:43:57,065 [wrapper] ==== wrapper stderr END ====
[2025-12-19 03:43:57]  *** Error codes and diagnostics ***
[2025-12-19 03:43:57]     "exeErrorCode": 0,
[2025-12-19 03:43:57]     "exeErrorDiag": "",
[2025-12-19 03:43:57]     "pilotErrorCode": 0,
[2025-12-19 03:43:57]     "pilotErrorDiag": "",
[2025-12-19 03:43:57]  *** Listing of results directory ***
[2025-12-19 03:43:57] insgesamt 412400
[2025-12-19 03:43:57] -rw-r--r-- 1 yeti boinc      5112 Dez 18 06:16 queuedata.json
[2025-12-19 03:43:57] -rw-r--r-- 1 yeti boinc    579449 Dez 18 06:16 pilot3.tar.gz
[2025-12-19 03:43:57] -rwx------ 1 yeti boinc     36322 Dez 18 06:17 runpilot2-wrapper.sh
[2025-12-19 03:43:57] -rw-r--r-- 1 yeti boinc       100 Dez 19 02:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 03:43:57] -rwxr-xr-x 1 yeti boinc      7986 Dez 19 02:33 run_atlas
[2025-12-19 03:43:57] -rw-r--r-- 1 yeti boinc       105 Dez 19 02:33 job.xml
[2025-12-19 03:43:57] -rw-r--r-- 2 yeti boinc 213789998 Dez 19 02:33 EVNT.47898779._000256.pool.root.1
[2025-12-19 03:43:57] -rw-r--r-- 2 yeti boinc     15847 Dez 19 02:33 start_atlas.sh
[2025-12-19 03:43:57] drwxrwx--x 2 yeti boinc      4096 Dez 19 02:33 shared
[2025-12-19 03:43:57] -rw-r--r-- 2 yeti boinc    592393 Dez 19 02:33 input.tar.gz
[2025-12-19 03:43:57] -rw-r--r-- 1 yeti boinc      6730 Dez 19 02:33 init_data.xml
[2025-12-19 03:43:57] -rw-r--r-- 1 yeti boinc         0 Dez 19 02:33 boinc_setup_complete
[2025-12-19 03:43:57] -rw-r--r-- 1 yeti boinc         0 Dez 19 02:33 boinc_lockfile
[2025-12-19 03:43:57] -rw-r--r-- 1 yeti boinc      2522 Dez 19 02:33 pandaJob.out
[2025-12-19 03:43:57] -rw------- 1 yeti boinc        52 Dez 19 02:33 setup.sh.local
[2025-12-19 03:43:57] -rw------- 1 yeti boinc    988880 Dez 19 02:33 agis_schedconf.cvmfs.json
[2025-12-19 03:43:57] -rw------- 1 yeti boinc   1516240 Dez 19 02:33 agis_ddmendpoints.agis.ALL.json
[2025-12-19 03:43:57] drwx------ 5 yeti boinc      4096 Dez 19 02:33 pilot3
[2025-12-19 03:43:57] -rw------- 1 yeti boinc 202793477 Dez 19 03:42 HITS.47898782._006371.pool.root.1
[2025-12-19 03:43:57] -rw-r--r-- 1 yeti boinc       529 Dez 19 03:42 boinc_task_state.xml
[2025-12-19 03:43:57] -rw------- 1 yeti boinc      1024 Dez 19 03:43 memory_monitor_summary.json
[2025-12-19 03:43:57] -rw------- 1 yeti boinc    261023 Dez 19 03:43 log.47898782._006371.job.log.tgz.1
[2025-12-19 03:43:57] -rw------- 1 yeti boinc        95 Dez 19 03:43 pilot_heartbeat.json
[2025-12-19 03:43:57] -rw------- 1 yeti boinc      7731 Dez 19 03:43 heartbeat.json
[2025-12-19 03:43:57] -rw-r--r-- 1 yeti boinc      8192 Dez 19 03:43 boinc_mmap_file
[2025-12-19 03:43:57] -rw-r--r-- 1 yeti boinc        27 Dez 19 03:43 wrapper_checkpoint.txt
[2025-12-19 03:43:57] -rw------- 1 yeti boinc       821 Dez 19 03:43 pilotlog.txt
[2025-12-19 03:43:57] -rw------- 1 yeti boinc    638004 Dez 19 03:43 log.47898782._006371.job.log.1
[2025-12-19 03:43:57] -rw------- 1 yeti boinc       357 Dez 19 03:43 output.list
[2025-12-19 03:43:57] -rw-r--r-- 1 yeti boinc       620 Dez 19 03:43 runtime_log
[2025-12-19 03:43:57] -rw------- 1 yeti boinc    921600 Dez 19 03:43 result.tar.gz
[2025-12-19 03:43:57] -rw-r--r-- 1 yeti boinc      9557 Dez 19 03:43 runtime_log.err
[2025-12-19 03:43:57] -rw------- 1 yeti boinc       640 Dez 19 03:43 2jcMDmzYLq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmUdKDml2sIVn.diag
[2025-12-19 03:43:57] -rw-r--r-- 1 yeti boinc     21617 Dez 19 03:43 stderr.txt
[2025-12-19 03:43:57] HITS file was successfully produced:
[2025-12-19 03:43:57] -rw------- 1 yeti boinc 202793477 Dez 19 03:42 shared/HITS.pool.root.1
[2025-12-19 03:43:57]  *** Contents of shared directory: ***
[2025-12-19 03:43:57] insgesamt 408328
[2025-12-19 03:43:57] -rw-r--r-- 2 yeti boinc 213789998 Dez 19 02:33 ATLAS.root_0
[2025-12-19 03:43:57] -rw-r--r-- 2 yeti boinc     15847 Dez 19 02:33 start_atlas.sh
[2025-12-19 03:43:57] -rw-r--r-- 2 yeti boinc    592393 Dez 19 02:33 input.tar.gz
[2025-12-19 03:43:57] -rw------- 1 yeti boinc 202793477 Dez 19 03:42 HITS.pool.root.1
[2025-12-19 03:43:57] -rw------- 1 yeti boinc    921600 Dez 19 03:43 result.tar.gz
03:43:58 (228194): run_atlas exited; CPU time 15775.298004
03:43:58 (228194): called boinc_finish(0)

</stderr_txt>
]]>

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